Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:25:48 (421069): wrapper (7.7.26015): starting
20:25:48 (421069): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 20:25:48] Arguments: --nthreads 12
[2025-06-03 20:25:48] Threads: 12
[2025-06-03 20:25:48] Checking for CVMFS
[2025-06-03 20:25:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 20:25:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 20:25:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 20:25:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 20:25:50] 2.11.5.0 1435708 32578 212028 146767 1 155 32233464 45568000 12387 130560 0 291110429 99.781 197774026 23375 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 20:25:50] CVMFS is ok
[2025-06-03 20:25:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 20:25:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 20:25:50] Further information can be found at the LHC@home message board.
[2025-06-03 20:25:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 20:25:50] Checking for apptainer binary...
[2025-06-03 20:25:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 20:25:50] Running /usr/bin/apptainer --version
[2025-06-03 20:25:50] apptainer version 1.4.0-1.el9
[2025-06-03 20:25:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 20:25:50] wns0166.triumf.lcg
[2025-06-03 20:25:50] apptainer works
[2025-06-03 20:25:50] Set ATHENA_PROC_NUMBER=12
[2025-06-03 20:25:50] Set ATHENA_CORE_NUMBER=12
[2025-06-03 20:25:51] Starting ATLAS job with PandaID=6678218948
[2025-06-03 20:25:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 20:29:57]  *** The last 200 lines of the pilot log: ***
[2025-06-03 20:29:57] 2025-06-04 03:29:41,027 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678218948/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 20:29:57] 2025-06-04 03:29:41,027 | INFO     | extracted standard info from prmon json
[2025-06-03 20:29:57] 2025-06-04 03:29:41,027 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 20:29:57] 2025-06-04 03:29:41,028 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 20:29:57] 2025-06-04 03:29:41,028 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 20:29:57] 2025-06-04 03:29:41,028 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | WARNING  | wrong length of table data, x=[1749007624.0], y=[1977.0] (must be same and length>=4)
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | INFO     | ..............................
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | INFO     | . Timing measurements:
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | INFO     | . get job = 0 s
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | INFO     | . initial setup = 3 s
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | INFO     | . payload setup = 13 s
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | INFO     | . stage-in = 0 s
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | INFO     | . payload execution = 37 s
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | INFO     | . stage-out = 0 s
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | INFO     | . log creation = 0 s
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | INFO     | ..............................
[2025-06-03 20:29:57] 2025-06-04 03:29:41,030 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 20:29:57] 2025-06-04 03:29:41,030 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678218948/pilotlog.txt
[2025-06-03 20:29:57] 2025-06-04 03:29:41,076 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 20:29:57] - Log from pilotlog.txt -
[2025-06-03 20:29:57] 2025-06-04 03:29:41,026 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 20:29:57] 2025-06-04 03:29:41,027 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678218948/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 20:29:57] 2025-06-04 03:29:41,027 | INFO     | extracted standard info from prmon json
[2025-06-03 20:29:57] 2025-06-04 03:29:41,027 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 20:29:57] 2025-06-04 03:29:41,028 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 20:29:57] 2025-06-04 03:29:41,028 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 20:29:57] 2025-06-04 03:29:41,028 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | WARNING  | wrong length of table data, x=[1749007624.0], y=[1977.0] (must be same and length>=4)
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | INFO     | ..............................
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | INFO     | . Timing measurements:
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | INFO     | . get job = 0 s
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | INFO     | . initial setup = 3 s
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | INFO     | . payload setup = 13 s
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | INFO     | . stage-in = 0 s
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | INFO     | . payload execution = 37 s
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | INFO     | . stage-out = 0 s
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | INFO     | . log creation = 0 s
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | INFO     | ..............................
[2025-06-03 20:29:57] 2025-06-04 03:29:41,030 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 20:29:57] 2025-06-04 03:29:41,030 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678218948/pilotlog.txt
[2025-06-03 20:29:57] 2025-06-04 03:29:41,076 | WARNING  | 
[2025-06-03 20:29:57] [begin log extracts]
[2025-06-03 20:29:57] - Log from pilotlog.txt -
[2025-06-03 20:29:57] 2025-06-04 03:29:41,026 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 20:29:57] 2025-06-04 03:29:41,027 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678218948/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 20:29:57] 2025-06-04 03:29:41,027 | INFO     | extracted standard info from prmon json
[2025-06-03 20:29:57] 2025-06-04 03:29:41,027 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 20:29:57] 2025-06-04 03:29:41,028 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 20:29:57] 2025-06-04 03:29:41,028 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 20:29:57] 2025-06-04 03:29:41,028 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | WARNING  | wrong length of table data, x=[1749007624.0], y=[1977.0] (must be same and length>=4)
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | INFO     | ..............................
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | INFO     | . Timing measurements:
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | INFO     | . get job = 0 s
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | INFO     | . initial setup = 3 s
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | INFO     | . payload setup = 13 s
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | INFO     | . stage-in = 0 s
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | INFO     | . payload execution = 37 s
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | INFO     | . stage-out = 0 s
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | INFO     | . log creation = 0 s
[2025-06-03 20:29:57] 2025-06-04 03:29:41,029 | INFO     | ..............................
[2025-06-03 20:29:57] 2025-06-04 03:29:41,030 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 20:29:57] 2025-06-04 03:29:41,030 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678218948/pilotlog.txt
[2025-06-03 20:29:57] [end log extracts]
[2025-06-03 20:29:57] 2025-06-04 03:29:41,076 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 20:29:57] 2025-06-04 03:29:41,077 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 20:29:57] 2025-06-04 03:29:41,151 | INFO     | 
[2025-06-03 20:29:57] 2025-06-04 03:29:41,151 | INFO     | job summary report
[2025-06-03 20:29:57] 2025-06-04 03:29:41,151 | INFO     | --------------------------------------------------
[2025-06-03 20:29:57] 2025-06-04 03:29:41,151 | INFO     | PanDA job id: 6678218948
[2025-06-03 20:29:57] 2025-06-04 03:29:41,151 | INFO     | task id: 45006595
[2025-06-03 20:29:57] 2025-06-04 03:29:41,151 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 20:27:23,618 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 20:29:57] 2025-06-04 03:29:41,151 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 20:29:57] 2025-06-04 03:29:41,151 | INFO     | pilot state: failed 
[2025-06-03 20:29:57] 2025-06-04 03:29:41,151 | INFO     | transexitcode: 65
[2025-06-03 20:29:57] 2025-06-04 03:29:41,152 | INFO     | exeerrorcode: 65
[2025-06-03 20:29:57] 2025-06-04 03:29:41,152 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 20:29:57] 2025-06-04 03:29:41,152 | INFO     | exitcode: 65
[2025-06-03 20:29:57] 2025-06-04 03:29:41,152 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 20:29:57] 2025-06-04 03:29:41,152 | INFO     | cpuconsumptiontime: 20 s
[2025-06-03 20:29:57] 2025-06-04 03:29:41,152 | INFO     | nevents: 0
[2025-06-03 20:29:57] 2025-06-04 03:29:41,152 | INFO     | neventsw: 0
[2025-06-03 20:29:57] 2025-06-04 03:29:41,152 | INFO     | pid: 438340
[2025-06-03 20:29:57] 2025-06-04 03:29:41,152 | INFO     | pgrp: 438340
[2025-06-03 20:29:57] 2025-06-04 03:29:41,152 | INFO     | corecount: 12
[2025-06-03 20:29:57] 2025-06-04 03:29:41,152 | INFO     | event service: False
[2025-06-03 20:29:57] 2025-06-04 03:29:41,152 | INFO     | sizes: {0: 2405181, 10: 2405387, 11: 2405415, 55: 2428623, 57: 2432886, 184: 2433000}
[2025-06-03 20:29:57] 2025-06-04 03:29:41,152 | INFO     | --------------------------------------------------
[2025-06-03 20:29:57] 2025-06-04 03:29:41,152 | INFO     | 
[2025-06-03 20:29:57] 2025-06-04 03:29:41,152 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 20:29:57] 2025-06-04 03:29:41,207 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 20:29:57] 2025-06-04 03:29:41,207 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 20:29:57] 2025-06-04 03:29:41,207 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 20:29:57] 2025-06-04 03:29:41,207 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 20:29:57] 2025-06-04 03:29:41,207 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 20:29:57] 2025-06-04 03:29:41,207 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 20:29:57] 2025-06-04 03:29:41,207 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 20:29:57] 2025-06-04 03:29:41,207 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 20:29:57] 2025-06-04 03:29:41,208 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 20:29:57] 2025-06-04 03:29:41,208 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 20:29:57] 2025-06-04 03:29:41,208 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 20:29:57] 2025-06-04 03:29:41,208 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 20:29:57] 2025-06-04 03:29:41,208 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 20:29:57] 2025-06-04 03:29:41,208 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 20:29:57] 2025-06-04 03:29:41,208 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 20:29:57] 2025-06-04 03:29:41,208 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 20:29:57] 2025-06-04 03:29:41,208 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 20:29:57] 2025-06-04 03:29:41,208 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 20:29:57] 2025-06-04 03:29:41,208 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 20:29:57] 2025-06-04 03:29:41,208 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 20:29:57] 2025-06-04 03:29:41,208 | INFO     | job 6678218948 has completed (purged errors)
[2025-06-03 20:29:57] 2025-06-04 03:29:41,209 | INFO     | overall cleanup function is called
[2025-06-03 20:29:57] 2025-06-04 03:29:42,215 | INFO     | --- collectZombieJob: --- 10, [438340]
[2025-06-03 20:29:57] 2025-06-04 03:29:42,216 | INFO     | zombie collector waiting for pid 438340
[2025-06-03 20:29:57] 2025-06-04 03:29:42,216 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 20:29:57] 2025-06-04 03:29:42,216 | INFO     | collected zombie processes
[2025-06-03 20:29:57] 2025-06-04 03:29:42,216 | INFO     | will attempt to kill all subprocesses of pid=438340
[2025-06-03 20:29:57] 2025-06-04 03:29:42,634 | INFO     | process IDs to be killed: [438340] (in reverse order)
[2025-06-03 20:29:57] 2025-06-04 03:29:42,709 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 20:29:57] 2025-06-04 03:29:42,709 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 20:29:57] 2025-06-04 03:29:42,717 | INFO     | did not find any defunct processes belonging to 438340
[2025-06-03 20:29:57] 2025-06-04 03:29:42,724 | INFO     | did not find any defunct processes belonging to 438340
[2025-06-03 20:29:57] 2025-06-04 03:29:42,725 | INFO     | ready for new job
[2025-06-03 20:29:57] 2025-06-04 03:29:42,725 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 20:29:57] 2025-06-04 03:29:42,726 | INFO     | **************************************
[2025-06-03 20:29:57] 2025-06-04 03:29:42,726 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 20:29:57] 2025-06-04 03:29:42,726 | INFO     | **************************************
[2025-06-03 20:29:57] 2025-06-04 03:29:42,726 | INFO     | 
[2025-06-03 20:29:57] 2025-06-04 03:29:42,730 | INFO     | architecture information:
[2025-06-03 20:29:57] 2025-06-04 03:29:42,730 | INFO     | executing command: cat /etc/os-release
[2025-06-03 20:29:57] 2025-06-04 03:29:42,743 | INFO     | cat /etc/os-release:
[2025-06-03 20:29:57] NAME="CentOS Linux"
[2025-06-03 20:29:57] VERSION="7 (Core)"
[2025-06-03 20:29:57] ID="centos"
[2025-06-03 20:29:57] ID_LIKE="rhel fedora"
[2025-06-03 20:29:57] VERSION_ID="7"
[2025-06-03 20:29:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 20:29:57] ANSI_COLOR="0;31"
[2025-06-03 20:29:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 20:29:57] HOME_URL="https://www.centos.org/"
[2025-06-03 20:29:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 20:29:57] 
[2025-06-03 20:29:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 20:29:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 20:29:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 20:29:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 20:29:57] 
[2025-06-03 20:29:57] 2025-06-04 03:29:42,743 | INFO     | **************************************
[2025-06-03 20:29:57] 2025-06-04 03:29:43,246 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 20:29:57] 2025-06-04 03:29:43,312 | INFO     | sufficient remaining disk space (1846236151808 B)
[2025-06-03 20:29:57] 2025-06-04 03:29:43,313 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 20:29:57] 2025-06-04 03:29:43,313 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 20:29:57] 2025-06-04 03:29:43,313 | INFO     | update_server=False
[2025-06-03 20:29:57] 2025-06-04 03:29:43,313 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 20:29:57] 2025-06-04 03:29:43,313 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 20:29:57] 2025-06-04 03:29:43,313 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 20:29:57] 2025-06-04 03:29:43,313 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 20:29:57] 2025-06-04 03:29:43,314 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 20:29:57] 2025-06-04 03:29:43,782 | INFO     | all data control threads have been joined
[2025-06-03 20:29:57] 2025-06-04 03:29:44,295 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:29:57] 2025-06-04 03:29:44,296 | INFO     | aborting loop
[2025-06-03 20:29:57] 2025-06-04 03:29:44,321 | INFO     | [job] retrieve thread has finished
[2025-06-03 20:29:57] 2025-06-04 03:29:44,328 | INFO     | all payload control threads have been joined
[2025-06-03 20:29:57] 2025-06-04 03:29:44,711 | INFO     | [payload] failed_post thread has finished
[2025-06-03 20:29:57] 2025-06-04 03:29:44,713 | INFO     | all job control threads have been joined
[2025-06-03 20:29:57] 2025-06-04 03:29:44,762 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 20:29:57] 2025-06-04 03:29:44,788 | INFO     | [data] control thread has finished
[2025-06-03 20:29:57] 2025-06-04 03:29:44,899 | INFO     | [data] copytool_in thread has finished
[2025-06-03 20:29:57] 2025-06-04 03:29:44,981 | INFO     | [job] validate thread has finished
[2025-06-03 20:29:57] 2025-06-04 03:29:44,990 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 20:29:57] 2025-06-04 03:29:45,237 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 20:29:57] 2025-06-04 03:29:45,301 | INFO     | [job] job monitor thread has finished
[2025-06-03 20:29:57] 2025-06-04 03:29:45,334 | INFO     | [payload] control thread has finished
[2025-06-03 20:29:57] 2025-06-04 03:29:45,352 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 20:29:57] 2025-06-04 03:29:45,500 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 20:29:57] 2025-06-04 03:29:45,613 | INFO     | [payload] validate_post thread has finished
[2025-06-03 20:29:57] 2025-06-04 03:29:45,718 | INFO     | [job] control thread has finished
[2025-06-03 20:29:57] 2025-06-04 03:29:46,164 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:29:57] 2025-06-04 03:29:46,319 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 20:29:57] 2025-06-04 03:29:46,767 | INFO     | [data] copytool_out thread has finished
[2025-06-03 20:29:57] 2025-06-04 03:29:47,170 | INFO     | [job] queue monitor thread has finished
[2025-06-03 20:29:57] 2025-06-04 03:29:50,328 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 20:29:57] 2025-06-04 03:29:52,235 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140402504038208)>', '<ExcThread(monitor, started 140401591703296)>']
[2025-06-03 20:29:57] 2025-06-04 03:29:52,370 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 20:29:57] 2025-06-04 03:29:52,370 | INFO     | [monitor] control thread has ended
[2025-06-03 20:29:57] 2025-06-04 03:29:57,263 | INFO     | all workflow threads have been joined
[2025-06-03 20:29:57] 2025-06-04 03:29:57,264 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 20:29:57] 2025-06-04 03:29:57,264 | INFO     | traces error code: 0
[2025-06-03 20:29:57] 2025-06-04 03:29:57,265 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 20:29:57] 2025-06-04 03:29:57,550 [wrapper] ==== pilot stdout END ====
[2025-06-03 20:29:57] 2025-06-04 03:29:57,564 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 20:29:57] 2025-06-04 03:29:57,572 [wrapper] pilotpid: 427399
[2025-06-03 20:29:57] 2025-06-04 03:29:57,575 [wrapper] Pilot exit status: 0
[2025-06-03 20:29:57] 2025-06-04 03:29:57,610 [wrapper] pandaids: 6678218948
[2025-06-03 20:29:57] 2025-06-04 03:29:57,660 [wrapper] cleanup supervisor_pilot  427405 427400
[2025-06-03 20:29:57] 2025-06-04 03:29:57,663 [wrapper] Test setup, not cleaning
[2025-06-03 20:29:57] 2025-06-04 03:29:57,667 [wrapper] apfmon messages muted
[2025-06-03 20:29:57] 2025-06-04 03:29:57,672 [wrapper] ==== wrapper stdout END ====
[2025-06-03 20:29:57] 2025-06-04 03:29:57,678 [wrapper] ==== wrapper stderr END ====
[2025-06-03 20:29:57]  *** Error codes and diagnostics ***
[2025-06-03 20:29:57]     "exeErrorCode": 65,
[2025-06-03 20:29:57]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 20:29:57]     "pilotErrorCode": 1305,
[2025-06-03 20:29:57]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 20:29:57]  *** Listing of results directory ***
[2025-06-03 20:29:57] total 216824
[2025-06-03 20:29:57] -rw-r--r--. 1 boinc boinc    495897 Jun  3 16:58 pilot3.tar.gz
[2025-06-03 20:29:57] -rw-r--r--. 1 boinc boinc      5111 Jun  3 17:51 queuedata.json
[2025-06-03 20:29:57] -rwx------. 1 boinc boinc     37140 Jun  3 17:51 runpilot2-wrapper.sh
[2025-06-03 20:29:57] -rw-r--r--. 1 boinc boinc       100 Jun  3 20:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 20:29:57] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 20:25 run_atlas
[2025-06-03 20:29:57] -rw-r--r--. 1 boinc boinc       105 Jun  3 20:25 job.xml
[2025-06-03 20:29:57] -rw-r--r--. 1 boinc boinc      6597 Jun  3 20:25 init_data.xml
[2025-06-03 20:29:57] -rw-r--r--. 2 boinc boinc 218004305 Jun  3 20:25 EVNT.45006593._001980.pool.root.1
[2025-06-03 20:29:57] -rw-r--r--. 2 boinc boinc     15093 Jun  3 20:25 start_atlas.sh
[2025-06-03 20:29:57] drwxrwx--x. 2 boinc boinc      4096 Jun  3 20:25 shared
[2025-06-03 20:29:57] -rw-r--r--. 2 boinc boinc    508882 Jun  3 20:25 input.tar.gz
[2025-06-03 20:29:57] -rw-r--r--. 1 boinc boinc         0 Jun  3 20:25 boinc_lockfile
[2025-06-03 20:29:57] -rw-r--r--. 1 boinc boinc      2525 Jun  3 20:25 pandaJob.out
[2025-06-03 20:29:57] -rw-------. 1 boinc boinc    986077 Jun  3 20:26 agis_schedconf.cvmfs.json
[2025-06-03 20:29:57] -rw-------. 1 boinc boinc   1603667 Jun  3 20:26 agis_ddmendpoints.agis.ALL.json
[2025-06-03 20:29:57] drwx------. 4 boinc boinc      4096 Jun  3 20:26 pilot3
[2025-06-03 20:29:57] -rw-r--r--. 1 boinc boinc       522 Jun  3 20:27 boinc_task_state.xml
[2025-06-03 20:29:57] -rw-------. 1 boinc boinc       953 Jun  3 20:27 memory_monitor_summary.json
[2025-06-03 20:29:57] -rw-------. 1 boinc boinc     20869 Jun  3 20:27 log.45006595._049358.job.log.tgz.1
[2025-06-03 20:29:57] -rw-------. 1 boinc boinc        95 Jun  3 20:29 pilot_heartbeat.json
[2025-06-03 20:29:57] -rw-------. 1 boinc boinc      8332 Jun  3 20:29 heartbeat.json
[2025-06-03 20:29:57] -rw-r--r--. 1 boinc boinc      8192 Jun  3 20:29 boinc_mmap_file
[2025-06-03 20:29:57] -rw-r--r--. 1 boinc boinc        22 Jun  3 20:29 wrapper_checkpoint.txt
[2025-06-03 20:29:57] -rw-------. 1 boinc boinc      4475 Jun  3 20:29 pilotlog.txt
[2025-06-03 20:29:57] -rw-------. 1 boinc boinc     77094 Jun  3 20:29 log.45006595._049358.job.log.1
[2025-06-03 20:29:57] -rw-------. 1 boinc boinc       188 Jun  3 20:29 output.list
[2025-06-03 20:29:57] -rw-r--r--. 1 boinc boinc       620 Jun  3 20:29 runtime_log
[2025-06-03 20:29:57] -rw-------. 1 boinc boinc    112640 Jun  3 20:29 result.tar.gz
[2025-06-03 20:29:57] -rw-r--r--. 1 boinc boinc      8484 Jun  3 20:29 runtime_log.err
[2025-06-03 20:29:57] -rw-------. 1 boinc boinc       647 Jun  3 20:29 3ELMDmSXrg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmLQaKDmUwZVQn.diag
[2025-06-03 20:29:57] -rw-r--r--. 1 boinc boinc     21654 Jun  3 20:29 stderr.txt
[2025-06-03 20:29:57] No HITS result produced
[2025-06-03 20:29:57]  *** Contents of shared directory: ***
[2025-06-03 20:29:57] total 213524
[2025-06-03 20:29:57] -rw-r--r--. 2 boinc boinc 218004305 Jun  3 20:25 ATLAS.root_0
[2025-06-03 20:29:57] -rw-r--r--. 2 boinc boinc     15093 Jun  3 20:25 start_atlas.sh
[2025-06-03 20:29:57] -rw-r--r--. 2 boinc boinc    508882 Jun  3 20:25 input.tar.gz
[2025-06-03 20:29:57] -rw-------. 1 boinc boinc    112640 Jun  3 20:29 result.tar.gz
20:29:59 (421069): run_atlas exited; CPU time 27.285205
20:29:59 (421069): called boinc_finish(0)

</stderr_txt>
]]>

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