Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:53:04 (162020): wrapper (7.7.26015): starting
23:53:04 (162020): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 23:53:04] Arguments: --nthreads 8
[2025-06-03 23:53:04] Threads: 8
[2025-06-03 23:53:04] Checking for CVMFS
[2025-06-03 23:53:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 23:53:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 23:53:05] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 23:53:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 23:53:05] 2.12.6.0 61263 30816 149368 146767 3 617 37185052 40960000 30888 16776704 1 474411574 99.791 265028425 31703 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 23:53:05] CVMFS is ok
[2025-06-03 23:53:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 23:53:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 23:53:05] Further information can be found at the LHC@home message board.
[2025-06-03 23:53:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 23:53:05] Checking for apptainer binary...
[2025-06-03 23:53:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 23:53:05] Running /usr/bin/apptainer --version
[2025-06-03 23:53:05] apptainer version 1.4.1-1.el9
[2025-06-03 23:53:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 23:53:06] c8-7-5.aglt2.org
[2025-06-03 23:53:06] apptainer works
[2025-06-03 23:53:06] Set ATHENA_PROC_NUMBER=8
[2025-06-03 23:53:06] Set ATHENA_CORE_NUMBER=8
[2025-06-03 23:53:06] Starting ATLAS job with PandaID=6677400399
[2025-06-03 23:53:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 00:52:02]  *** The last 200 lines of the pilot log: ***
[2025-06-04 00:52:02]  mtime=0
[2025-06-04 00:52:02]  protocol_id=None
[2025-06-04 00:52:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 00:52:02]  replicas=None
[2025-06-04 00:52:02]  scope=mc23_13p6TeV
[2025-06-04 00:52:02]  status=None
[2025-06-04 00:52:02]  status_code=0
[2025-06-04 00:52:02]  storage_token=
[2025-06-04 00:52:02]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6677400399/log.45006595._011578.job.log.tgz.1
[2025-06-04 00:52:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ba/48/log.45006595._011578.job.log.tgz.1
[2025-06-04 00:52:02]  workdir=None
[2025-06-04 00:52:02] ]
[2025-06-04 00:52:02] 2025-06-04 04:51:33,975 | INFO     | transferring file log.45006595._011578.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6677400399/log.45006595._011578.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 00:52:02] 2025-06-04 04:51:33,975 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6677400399/log.45006595._011578.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._011578.job
[2025-06-04 00:52:02] 2025-06-04 04:51:33,998 | INFO     | adding to output.list: log.45006595._011578.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ba/48/log.45006595._011578.job.log.tg
[2025-06-04 00:52:02] 2025-06-04 04:51:33,999 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 00:52:02] 2025-06-04 04:51:33,999 | INFO     | summary of transferred files:
[2025-06-04 00:52:02] 2025-06-04 04:51:33,999 | INFO     |  -- lfn=log.45006595._011578.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 00:52:02] 2025-06-04 04:51:33,999 | INFO     | stage-out finished correctly
[2025-06-04 00:52:02] 2025-06-04 04:51:34,578 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 00:52:02] 2025-06-04 04:51:34,883 | INFO     | PID=178496 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 00:52:02] 2025-06-04 04:51:34,885 | INFO     | .. there are 60 such processes running
[2025-06-04 00:52:02] 2025-06-04 04:51:36,971 | INFO     | job 6677400399 has state=finished
[2025-06-04 00:52:02] 2025-06-04 04:51:36,972 | INFO     | preparing for final server update for job 6677400399 in state='finished'
[2025-06-04 00:52:02] 2025-06-04 04:51:36,972 | INFO     | this job has now completed (state=finished)
[2025-06-04 00:52:02] 2025-06-04 04:51:36,972 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 00:52:02] 2025-06-04 04:51:36,972 | INFO     | log transfer has been attempted: DONE
[2025-06-04 00:52:02] 2025-06-04 04:51:36,973 | INFO     | job 6677400399 has finished - writing final server update
[2025-06-04 00:52:02] 2025-06-04 04:51:36,973 | INFO     | total number of processed events: 400 (read)
[2025-06-04 00:52:02] 2025-06-04 04:51:36,991 | INFO     | executing command: lscpu
[2025-06-04 00:52:02] 2025-06-04 04:51:37,064 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 00:52:02] 2025-06-04 04:51:37,400 | WARNING  | process 238693 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 00:52:02] 2025-06-04 04:51:37,401 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677400399/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 00:52:02] 2025-06-04 04:51:37,932 | INFO     | number of running child processes to parent process 238693: 1
[2025-06-04 00:52:02] 2025-06-04 04:51:37,932 | INFO     | maximum number of monitored processes: 6
[2025-06-04 00:52:02] 2025-06-04 04:51:40,435 | INFO     | monitor loop #238: job 0:6677400399 is in state 'finished'
[2025-06-04 00:52:02] 2025-06-04 04:51:40,435 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 00:52:02] 2025-06-04 04:51:42,939 | INFO     | monitor loop #239: job 0:6677400399 is in state 'finished'
[2025-06-04 00:52:02] 2025-06-04 04:51:42,939 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 00:52:02] 2025-06-04 04:51:43,196 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 00:52:02] 2025-06-04 04:51:43,196 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677400399/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 00:52:02] 2025-06-04 04:51:43,197 | INFO     | extracted standard info from prmon json
[2025-06-04 00:52:02] 2025-06-04 04:51:43,197 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 00:52:02] 2025-06-04 04:51:43,197 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 00:52:02] 2025-06-04 04:51:43,197 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 00:52:02] 2025-06-04 04:51:43,197 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 00:52:02] 2025-06-04 04:51:43,198 | INFO     | fitting pss+swap vs Time
[2025-06-04 00:52:02] 2025-06-04 04:51:43,198 | INFO     | sum of square deviations: 38744120.480000004
[2025-06-04 00:52:02] 2025-06-04 04:51:43,198 | INFO     | sum of deviations: 3647528641.3200026
[2025-06-04 00:52:02] 2025-06-04 04:51:43,198 | INFO     | mean x: 1749011024.52
[2025-06-04 00:52:02] 2025-06-04 04:51:43,198 | INFO     | mean y: 2354837.68
[2025-06-04 00:52:02] 2025-06-04 04:51:43,198 | INFO     | -- intersect: -164656636691.48172
[2025-06-04 00:52:02] 2025-06-04 04:51:43,198 | INFO     | intersect: -164656636691.48172
[2025-06-04 00:52:02] 2025-06-04 04:51:43,198 | INFO     | chi2: 0.8068715251097641
[2025-06-04 00:52:02] 2025-06-04 04:51:43,198 | INFO     | -- intersect: -164656636691.48172
[2025-06-04 00:52:02] 2025-06-04 04:51:43,199 | INFO     | current memory leak: 94.14 B/s (using 50 data points, chi2=0.81)
[2025-06-04 00:52:02] 2025-06-04 04:51:43,199 | INFO     | ..............................
[2025-06-04 00:52:02] 2025-06-04 04:51:43,199 | INFO     | . Timing measurements:
[2025-06-04 00:52:02] 2025-06-04 04:51:43,199 | INFO     | . get job = 0 s
[2025-06-04 00:52:02] 2025-06-04 04:51:43,199 | INFO     | . initial setup = 2 s
[2025-06-04 00:52:02] 2025-06-04 04:51:43,199 | INFO     | . payload setup = 7 s
[2025-06-04 00:52:02] 2025-06-04 04:51:43,199 | INFO     | . stage-in = 0 s
[2025-06-04 00:52:02] 2025-06-04 04:51:43,199 | INFO     | . payload execution = 3468 s
[2025-06-04 00:52:02] 2025-06-04 04:51:43,199 | INFO     | . stage-out = 0 s
[2025-06-04 00:52:02] 2025-06-04 04:51:43,199 | INFO     | . log creation = 0 s
[2025-06-04 00:52:02] 2025-06-04 04:51:43,199 | INFO     | ..............................
[2025-06-04 00:52:02] 2025-06-04 04:51:43,251 | INFO     | 
[2025-06-04 00:52:02] 2025-06-04 04:51:43,251 | INFO     | job summary report
[2025-06-04 00:52:02] 2025-06-04 04:51:43,251 | INFO     | --------------------------------------------------
[2025-06-04 00:52:02] 2025-06-04 04:51:43,251 | INFO     | PanDA job id: 6677400399
[2025-06-04 00:52:02] 2025-06-04 04:51:43,251 | INFO     | task id: 45006595
[2025-06-04 00:52:02] 2025-06-04 04:51:43,251 | INFO     | errors: (none)
[2025-06-04 00:52:02] 2025-06-04 04:51:43,251 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 00:52:02] 2025-06-04 04:51:43,251 | INFO     | pilot state: finished 
[2025-06-04 00:52:02] 2025-06-04 04:51:43,251 | INFO     | transexitcode: 0
[2025-06-04 00:52:02] 2025-06-04 04:51:43,251 | INFO     | exeerrorcode: 0
[2025-06-04 00:52:02] 2025-06-04 04:51:43,251 | INFO     | exeerrordiag: 
[2025-06-04 00:52:02] 2025-06-04 04:51:43,251 | INFO     | exitcode: 0
[2025-06-04 00:52:02] 2025-06-04 04:51:43,251 | INFO     | exitmsg: OK
[2025-06-04 00:52:02] 2025-06-04 04:51:43,251 | INFO     | cpuconsumptiontime: 20184 s
[2025-06-04 00:52:02] 2025-06-04 04:51:43,251 | INFO     | nevents: 400
[2025-06-04 00:52:02] 2025-06-04 04:51:43,252 | INFO     | neventsw: 0
[2025-06-04 00:52:02] 2025-06-04 04:51:43,252 | INFO     | pid: 238693
[2025-06-04 00:52:02] 2025-06-04 04:51:43,252 | INFO     | pgrp: 238693
[2025-06-04 00:52:02] 2025-06-04 04:51:43,252 | INFO     | corecount: 8
[2025-06-04 00:52:02] 2025-06-04 04:51:43,252 | INFO     | event service: False
[2025-06-04 00:52:02] 2025-06-04 04:51:43,252 | INFO     | sizes: {0: 2405176, 5: 2405382, 10: 2405438, 3479: 2430973, 3481: 2439914, 3482: 2439970, 3490: 2440268}
[2025-06-04 00:52:02] 2025-06-04 04:51:43,252 | INFO     | --------------------------------------------------
[2025-06-04 00:52:02] 2025-06-04 04:51:43,252 | INFO     | 
[2025-06-04 00:52:02] 2025-06-04 04:51:43,252 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 00:52:02] 2025-06-04 04:51:43,272 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 00:52:02] 2025-06-04 04:51:43,272 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 00:52:02] 2025-06-04 04:51:43,272 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 00:52:02] 2025-06-04 04:51:43,272 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 00:52:02] 2025-06-04 04:51:43,272 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 00:52:02] 2025-06-04 04:51:43,272 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 00:52:02] 2025-06-04 04:51:43,273 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 00:52:02] 2025-06-04 04:51:43,273 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 00:52:02] 2025-06-04 04:51:43,273 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 00:52:02] 2025-06-04 04:51:43,273 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 00:52:02] 2025-06-04 04:51:43,273 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 00:52:02] 2025-06-04 04:51:43,273 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 00:52:02] 2025-06-04 04:51:43,273 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 00:52:02] 2025-06-04 04:51:43,273 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 00:52:02] 2025-06-04 04:51:43,273 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 00:52:02] 2025-06-04 04:51:43,273 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 00:52:02] 2025-06-04 04:51:43,273 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 00:52:02] 2025-06-04 04:51:43,273 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 00:52:02] 2025-06-04 04:51:43,273 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 00:52:02] 2025-06-04 04:51:43,273 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 00:52:02] 2025-06-04 04:51:43,273 | INFO     | job 6677400399 has completed (purged errors)
[2025-06-04 00:52:02] 2025-06-04 04:51:43,273 | INFO     | overall cleanup function is called
[2025-06-04 00:52:02] 2025-06-04 04:51:44,279 | INFO     | --- collectZombieJob: --- 10, [238693]
[2025-06-04 00:52:02] 2025-06-04 04:51:44,279 | INFO     | zombie collector waiting for pid 238693
[2025-06-04 00:52:02] 2025-06-04 04:51:44,280 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 00:52:02] 2025-06-04 04:51:44,280 | INFO     | collected zombie processes
[2025-06-04 00:52:02] 2025-06-04 04:51:44,280 | INFO     | will attempt to kill all subprocesses of pid=238693
[2025-06-04 00:52:02] 2025-06-04 04:51:44,753 | INFO     | process IDs to be killed: [238693] (in reverse order)
[2025-06-04 00:52:02] 2025-06-04 04:51:44,946 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 00:52:02] 2025-06-04 04:51:44,946 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 00:52:02] 2025-06-04 04:51:44,974 | INFO     | did not find any defunct processes belonging to 238693
[2025-06-04 00:52:02] 2025-06-04 04:51:45,003 | INFO     | did not find any defunct processes belonging to 238693
[2025-06-04 00:52:02] 2025-06-04 04:51:45,004 | INFO     | ready for new job
[2025-06-04 00:52:02] 2025-06-04 04:51:45,004 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 00:52:02] 2025-06-04 04:51:45,005 | INFO     | **************************************
[2025-06-04 00:52:02] 2025-06-04 04:51:45,005 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 00:52:02] 2025-06-04 04:51:45,005 | INFO     | **************************************
[2025-06-04 00:52:02] 2025-06-04 04:51:45,005 | INFO     | 
[2025-06-04 00:52:02] 2025-06-04 04:51:45,023 | INFO     | architecture information:
[2025-06-04 00:52:02] 2025-06-04 04:51:45,023 | INFO     | executing command: cat /etc/os-release
[2025-06-04 00:52:02] 2025-06-04 04:51:45,039 | INFO     | cat /etc/os-release:
[2025-06-04 00:52:02] NAME="CentOS Linux"
[2025-06-04 00:52:02] VERSION="7 (Core)"
[2025-06-04 00:52:02] ID="centos"
[2025-06-04 00:52:02] ID_LIKE="rhel fedora"
[2025-06-04 00:52:02] VERSION_ID="7"
[2025-06-04 00:52:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 00:52:02] ANSI_COLOR="0;31"
[2025-06-04 00:52:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 00:52:02] HOME_URL="https://www.centos.org/"
[2025-06-04 00:52:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 00:52:02] 
[2025-06-04 00:52:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 00:52:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 00:52:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 00:52:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 00:52:02] 
[2025-06-04 00:52:02] 2025-06-04 04:51:45,039 | INFO     | **************************************
[2025-06-04 00:52:02] 2025-06-04 04:51:45,542 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 00:52:02] 2025-06-04 04:51:45,558 | INFO     | sufficient remaining disk space (172030427136 B)
[2025-06-04 00:52:02] 2025-06-04 04:51:45,558 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 00:52:02] 2025-06-04 04:51:45,558 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 00:52:02] 2025-06-04 04:51:45,558 | INFO     | update_server=False
[2025-06-04 00:52:02] 2025-06-04 04:51:45,558 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 00:52:02] 2025-06-04 04:51:45,559 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 00:52:02] 2025-06-04 04:51:45,559 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 00:52:02] 2025-06-04 04:51:45,559 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 00:52:02] 2025-06-04 04:51:45,559 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 00:52:02] 2025-06-04 04:51:45,559 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 00:52:02] 2025-06-04 04:51:45,559 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 00:52:02] 2025-06-04 04:51:45,985 | INFO     | all job control threads have been joined
[2025-06-04 00:52:02] 2025-06-04 04:51:45,996 | INFO     | all payload control threads have been joined
[2025-06-04 00:52:02] 2025-06-04 04:51:46,302 | INFO     | all data control threads have been joined
[2025-06-04 00:52:02] 2025-06-04 04:51:46,448 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 00:52:02] 2025-06-04 04:51:46,449 | INFO     | aborting loop
[2025-06-04 00:52:02] 2025-06-04 04:51:46,564 | INFO     | [job] retrieve thread has finished
[2025-06-04 00:52:02] 2025-06-04 04:51:46,773 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 00:52:02] 2025-06-04 04:51:46,991 | INFO     | [job] control thread has finished
[2025-06-04 00:52:02] 2025-06-04 04:51:47,001 | INFO     | [payload] control thread has finished
[2025-06-04 00:52:02] 2025-06-04 04:51:47,009 | INFO     | [data] copytool_in thread has finished
[2025-06-04 00:52:02] 2025-06-04 04:51:47,073 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 00:52:02] 2025-06-04 04:51:47,307 | INFO     | [data] control thread has finished
[2025-06-04 00:52:02] 2025-06-04 04:51:47,356 | INFO     | [payload] failed_post thread has finished
[2025-06-04 00:52:02] 2025-06-04 04:51:47,453 | INFO     | [job] job monitor thread has finished
[2025-06-04 00:52:02] 2025-06-04 04:51:47,564 | INFO     | [data] copytool_out thread has finished
[2025-06-04 00:52:02] 2025-06-04 04:51:47,572 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 00:52:02] 2025-06-04 04:51:47,742 | INFO     | [job] validate thread has finished
[2025-06-04 00:52:02] 2025-06-04 04:51:47,799 | INFO     | [payload] validate_post thread has finished
[2025-06-04 00:52:02] 2025-06-04 04:51:48,262 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 00:52:02] 2025-06-04 04:51:49,267 | INFO     | [job] queue monitor thread has finished
[2025-06-04 00:52:02] 2025-06-04 04:51:49,565 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 00:52:02] 2025-06-04 04:51:55,706 | INFO     | job.realtimelogging is not enabled
[2025-06-04 00:52:02] 2025-06-04 04:51:56,712 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 00:52:02] 2025-06-04 04:51:56,837 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139749476517696)>', '<ExcThread(monitor, started 139749125756672)>']
[2025-06-04 00:52:02] 2025-06-04 04:51:57,625 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 00:52:02] 2025-06-04 04:51:57,625 | INFO     | [monitor] control thread has ended
[2025-06-04 00:52:02] 2025-06-04 04:52:01,863 | INFO     | all workflow threads have been joined
[2025-06-04 00:52:02] 2025-06-04 04:52:01,863 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 00:52:02] 2025-06-04 04:52:01,863 | INFO     | traces error code: 0
[2025-06-04 00:52:02] 2025-06-04 04:52:01,864 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 00:52:02] 2025-06-04 04:52:02,084 [wrapper] ==== pilot stdout END ====
[2025-06-04 00:52:02] 2025-06-04 04:52:02,087 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 00:52:02] 2025-06-04 04:52:02,091 [wrapper] pilotpid: 178496
[2025-06-04 00:52:02] 2025-06-04 04:52:02,104 [wrapper] Pilot exit status: 0
[2025-06-04 00:52:02] 2025-06-04 04:52:02,189 [wrapper] pandaids: 6677400399
[2025-06-04 00:52:02] 2025-06-04 04:52:02,350 [wrapper] cleanup supervisor_pilot 2203825 178497
[2025-06-04 00:52:02] 2025-06-04 04:52:02,357 [wrapper] Test setup, not cleaning
[2025-06-04 00:52:02] 2025-06-04 04:52:02,360 [wrapper] apfmon messages muted
[2025-06-04 00:52:02] 2025-06-04 04:52:02,362 [wrapper] ==== wrapper stdout END ====
[2025-06-04 00:52:02] 2025-06-04 04:52:02,364 [wrapper] ==== wrapper stderr END ====
[2025-06-04 00:52:02]  *** Error codes and diagnostics ***
[2025-06-04 00:52:02]     "exeErrorCode": 0,
[2025-06-04 00:52:02]     "exeErrorDiag": "",
[2025-06-04 00:52:02]     "pilotErrorCode": 0,
[2025-06-04 00:52:02]     "pilotErrorDiag": "",
[2025-06-04 00:52:02]  *** Listing of results directory ***
[2025-06-04 00:52:02] total 390596
[2025-06-04 00:52:02] -rw-r--r--. 1 boincer umatlas    495897 Jun  2 16:47 pilot3.tar.gz
[2025-06-04 00:52:02] -rwx------. 1 boincer umatlas     37140 Jun  2 16:49 runpilot2-wrapper.sh
[2025-06-04 00:52:02] -rw-r--r--. 1 boincer umatlas      5111 Jun  2 16:49 queuedata.json
[2025-06-04 00:52:02] -rw-r--r--. 1 boincer umatlas       100 Jun  3 23:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 00:52:02] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 23:53 run_atlas
[2025-06-04 00:52:02] -rw-r--r--. 1 boincer umatlas       105 Jun  3 23:53 job.xml
[2025-06-04 00:52:02] -rw-r--r--. 2 boincer umatlas 216193892 Jun  3 23:53 EVNT.45006593._000464.pool.root.1
[2025-06-04 00:52:02] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 23:53 start_atlas.sh
[2025-06-04 00:52:02] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 23:53 shared
[2025-06-04 00:52:02] -rw-r--r--. 2 boincer umatlas    508873 Jun  3 23:53 input.tar.gz
[2025-06-04 00:52:02] -rw-r--r--. 1 boincer umatlas         0 Jun  3 23:53 boinc_lockfile
[2025-06-04 00:52:02] -rw-r--r--. 1 boincer umatlas      2521 Jun  3 23:53 pandaJob.out
[2025-06-04 00:52:02] -rw-------. 1 boincer umatlas    986077 Jun  3 23:53 agis_schedconf.cvmfs.json
[2025-06-04 00:52:02] -rw-------. 1 boincer umatlas   1603667 Jun  3 23:53 agis_ddmendpoints.agis.ALL.json
[2025-06-04 00:52:02] drwx------. 4 boincer umatlas      4096 Jun  3 23:53 pilot3
[2025-06-04 00:52:02] -rw-r--r--. 1 boincer umatlas      7160 Jun  4 00:45 init_data.xml
[2025-06-04 00:52:02] -rw-------. 1 boincer umatlas 178704946 Jun  4 00:51 HITS.45006595._011578.pool.root.1
[2025-06-04 00:52:02] -rw-r--r--. 1 boincer umatlas       530 Jun  4 00:51 boinc_task_state.xml
[2025-06-04 00:52:02] -rw-------. 1 boincer umatlas        95 Jun  4 00:51 pilot_heartbeat.json
[2025-06-04 00:52:02] -rw-------. 1 boincer umatlas      1042 Jun  4 00:51 memory_monitor_summary.json
[2025-06-04 00:52:02] -rw-------. 1 boincer umatlas    275208 Jun  4 00:51 log.45006595._011578.job.log.tgz.1
[2025-06-04 00:52:02] -rw-------. 1 boincer umatlas      7702 Jun  4 00:51 heartbeat.json
[2025-06-04 00:52:02] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 00:52 boinc_mmap_file
[2025-06-04 00:52:02] -rw-r--r--. 1 boincer umatlas        27 Jun  4 00:52 wrapper_checkpoint.txt
[2025-06-04 00:52:02] -rw-------. 1 boincer umatlas      4549 Jun  4 00:52 pilotlog.txt
[2025-06-04 00:52:02] -rw-------. 1 boincer umatlas    345175 Jun  4 00:52 log.45006595._011578.job.log.1
[2025-06-04 00:52:02] -rw-------. 1 boincer umatlas       357 Jun  4 00:52 output.list
[2025-06-04 00:52:02] -rw-r--r--. 1 boincer umatlas       620 Jun  4 00:52 runtime_log
[2025-06-04 00:52:02] -rw-------. 1 boincer umatlas    634880 Jun  4 00:52 result.tar.gz
[2025-06-04 00:52:02] -rw-------. 1 boincer umatlas       654 Jun  4 00:52 X42LDmIHRg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmqaWKDm0dcf4n.diag
[2025-06-04 00:52:02] -rw-r--r--. 1 boincer umatlas      8649 Jun  4 00:52 runtime_log.err
[2025-06-04 00:52:02] -rw-r--r--. 1 boincer umatlas     21724 Jun  4 00:52 stderr.txt
[2025-06-04 00:52:02] HITS file was successfully produced:
[2025-06-04 00:52:02] -rw-------. 1 boincer umatlas 178704946 Jun  4 00:51 shared/HITS.pool.root.1
[2025-06-04 00:52:02]  *** Contents of shared directory: ***
[2025-06-04 00:52:02] total 386788
[2025-06-04 00:52:02] -rw-r--r--. 2 boincer umatlas 216193892 Jun  3 23:53 ATLAS.root_0
[2025-06-04 00:52:02] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 23:53 start_atlas.sh
[2025-06-04 00:52:02] -rw-r--r--. 2 boincer umatlas    508873 Jun  3 23:53 input.tar.gz
[2025-06-04 00:52:02] -rw-------. 1 boincer umatlas 178704946 Jun  4 00:51 HITS.pool.root.1
[2025-06-04 00:52:02] -rw-------. 1 boincer umatlas    634880 Jun  4 00:52 result.tar.gz
00:52:03 (162020): run_atlas exited; CPU time 20286.426540
00:52:03 (162020): called boinc_finish(0)

</stderr_txt>
]]>

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