Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:59:53 (24116): wrapper (7.7.26015): starting
22:59:53 (24116): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 22:59:53] Arguments: --nthreads 12
[2025-06-03 22:59:53] Threads: 12
[2025-06-03 22:59:53] Checking for CVMFS
[2025-06-03 22:59:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 22:59:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 22:59:53] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 22:59:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 22:59:53] 2.11.2.0 2945 35113 88448 146765 0 58 18480946 20275201 1 130560 0 15756248 99.982 6406559 7852 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 22:59:53] CVMFS is ok
[2025-06-03 22:59:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 22:59:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 22:59:53] Further information can be found at the LHC@home message board.
[2025-06-03 22:59:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 22:59:53] Checking for apptainer binary...
[2025-06-03 22:59:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 22:59:53] Running /usr/bin/apptainer --version
[2025-06-03 22:59:53] apptainer version 1.3.2-1.el7
[2025-06-03 22:59:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 22:59:55] c-205-2.aglt2.org
[2025-06-03 22:59:55] apptainer works
[2025-06-03 22:59:55] Set ATHENA_PROC_NUMBER=12
[2025-06-03 22:59:55] Set ATHENA_CORE_NUMBER=12
[2025-06-03 22:59:55] Starting ATLAS job with PandaID=6678150914
[2025-06-03 22:59:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 00:07:37]  *** The last 200 lines of the pilot log: ***
[2025-06-04 00:07:37]  status=None
[2025-06-04 00:07:37]  status_code=0
[2025-06-04 00:07:37]  storage_token=
[2025-06-04 00:07:37]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678150914/log.45006595._046815.job.log.tgz.1
[2025-06-04 00:07:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d2/be/log.45006595._046815.job.log.tgz.1
[2025-06-04 00:07:37]  workdir=None
[2025-06-04 00:07:37] ]
[2025-06-04 00:07:37] 2025-06-04 04:07:11,159 | INFO     | transferring file log.45006595._046815.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678150914/log.45006595._046815.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 00:07:37] 2025-06-04 04:07:11,159 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678150914/log.45006595._046815.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._046815.job
[2025-06-04 00:07:37] 2025-06-04 04:07:11,182 | INFO     | adding to output.list: log.45006595._046815.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d2/be/log.45006595._046815.job.log.tg
[2025-06-04 00:07:37] 2025-06-04 04:07:11,183 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 00:07:37] 2025-06-04 04:07:11,183 | INFO     | summary of transferred files:
[2025-06-04 00:07:37] 2025-06-04 04:07:11,183 | INFO     |  -- lfn=log.45006595._046815.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 00:07:37] 2025-06-04 04:07:11,184 | INFO     | stage-out finished correctly
[2025-06-04 00:07:37] 2025-06-04 04:07:13,367 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 00:07:37] 2025-06-04 04:07:13,833 | INFO     | job 6678150914 has state=finished
[2025-06-04 00:07:37] 2025-06-04 04:07:13,833 | INFO     | preparing for final server update for job 6678150914 in state='finished'
[2025-06-04 00:07:37] 2025-06-04 04:07:13,834 | INFO     | this job has now completed (state=finished)
[2025-06-04 00:07:37] 2025-06-04 04:07:13,834 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 00:07:37] 2025-06-04 04:07:13,834 | INFO     | log transfer has been attempted: DONE
[2025-06-04 00:07:37] 2025-06-04 04:07:13,834 | INFO     | job 6678150914 has finished - writing final server update
[2025-06-04 00:07:37] 2025-06-04 04:07:13,835 | INFO     | total number of processed events: 400 (read)
[2025-06-04 00:07:37] 2025-06-04 04:07:13,836 | INFO     | executing command: lscpu
[2025-06-04 00:07:37] 2025-06-04 04:07:13,865 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 00:07:37] 2025-06-04 04:07:15,729 | WARNING  | process 1966 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 00:07:37] 2025-06-04 04:07:15,729 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678150914/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 00:07:37] 2025-06-04 04:07:15,730 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678150914/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 00:07:37] 2025-06-04 04:07:15,731 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3957250 B
[2025-06-04 00:07:37] 2025-06-04 04:07:15,731 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15546 B
[2025-06-04 00:07:37] 2025-06-04 04:07:15,731 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 00:07:37] 2025-06-04 04:07:18,485 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 00:07:37] 2025-06-04 04:07:18,485 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678150914/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 00:07:37] 2025-06-04 04:07:18,490 | INFO     | extracted standard info from prmon json
[2025-06-04 00:07:37] 2025-06-04 04:07:18,491 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 00:07:37] 2025-06-04 04:07:18,491 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 00:07:37] 2025-06-04 04:07:18,492 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 00:07:37] 2025-06-04 04:07:18,492 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 00:07:37] 2025-06-04 04:07:18,494 | INFO     | fitting pss+swap vs Time
[2025-06-04 00:07:37] 2025-06-04 04:07:18,494 | INFO     | sum of square deviations: 63666310.0
[2025-06-04 00:07:37] 2025-06-04 04:07:18,495 | INFO     | sum of deviations: -1752913324.0
[2025-06-04 00:07:37] 2025-06-04 04:07:18,495 | INFO     | mean x: 1749008113.0
[2025-06-04 00:07:37] 2025-06-04 04:07:18,495 | INFO     | mean y: 2695049.5423728814
[2025-06-04 00:07:37] 2025-06-04 04:07:18,495 | INFO     | -- intersect: 48157828040.001495
[2025-06-04 00:07:37] 2025-06-04 04:07:18,496 | INFO     | intersect: 48157828040.001495
[2025-06-04 00:07:37] 2025-06-04 04:07:18,496 | INFO     | chi2: 0.0829470017936248
[2025-06-04 00:07:37] 2025-06-04 04:07:18,496 | INFO     | -- intersect: 48157828040.001495
[2025-06-04 00:07:37] 2025-06-04 04:07:18,496 | INFO     | current memory leak: -27.53 B/s (using 59 data points, chi2=0.08)
[2025-06-04 00:07:37] 2025-06-04 04:07:18,497 | INFO     | ..............................
[2025-06-04 00:07:37] 2025-06-04 04:07:18,497 | INFO     | . Timing measurements:
[2025-06-04 00:07:37] 2025-06-04 04:07:18,497 | INFO     | . get job = 0 s
[2025-06-04 00:07:37] 2025-06-04 04:07:18,497 | INFO     | . initial setup = 2 s
[2025-06-04 00:07:37] 2025-06-04 04:07:18,497 | INFO     | . payload setup = 9 s
[2025-06-04 00:07:37] 2025-06-04 04:07:18,497 | INFO     | . stage-in = 0 s
[2025-06-04 00:07:37] 2025-06-04 04:07:18,498 | INFO     | . payload execution = 3991 s
[2025-06-04 00:07:37] 2025-06-04 04:07:18,498 | INFO     | . stage-out = 0 s
[2025-06-04 00:07:37] 2025-06-04 04:07:18,498 | INFO     | . log creation = 0 s
[2025-06-04 00:07:37] 2025-06-04 04:07:18,498 | INFO     | ..............................
[2025-06-04 00:07:37] 2025-06-04 04:07:18,517 | INFO     | sufficient remaining disk space (29473374208 B)
[2025-06-04 00:07:37] 2025-06-04 04:07:18,523 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 00:07:37] 2025-06-04 04:07:18,583 | INFO     | 
[2025-06-04 00:07:37] 2025-06-04 04:07:18,583 | INFO     | job summary report
[2025-06-04 00:07:37] 2025-06-04 04:07:18,583 | INFO     | --------------------------------------------------
[2025-06-04 00:07:37] 2025-06-04 04:07:18,583 | INFO     | PanDA job id: 6678150914
[2025-06-04 00:07:37] 2025-06-04 04:07:18,583 | INFO     | task id: 45006595
[2025-06-04 00:07:37] 2025-06-04 04:07:18,583 | INFO     | errors: (none)
[2025-06-04 00:07:37] 2025-06-04 04:07:18,583 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 00:07:37] 2025-06-04 04:07:18,584 | INFO     | pilot state: finished 
[2025-06-04 00:07:37] 2025-06-04 04:07:18,584 | INFO     | transexitcode: 0
[2025-06-04 00:07:37] 2025-06-04 04:07:18,584 | INFO     | exeerrorcode: 0
[2025-06-04 00:07:37] 2025-06-04 04:07:18,584 | INFO     | exeerrordiag: 
[2025-06-04 00:07:37] 2025-06-04 04:07:18,584 | INFO     | exitcode: 0
[2025-06-04 00:07:37] 2025-06-04 04:07:18,584 | INFO     | exitmsg: OK
[2025-06-04 00:07:37] 2025-06-04 04:07:18,584 | INFO     | cpuconsumptiontime: 42480 s
[2025-06-04 00:07:37] 2025-06-04 04:07:18,584 | INFO     | nevents: 400
[2025-06-04 00:07:37] 2025-06-04 04:07:18,584 | INFO     | neventsw: 0
[2025-06-04 00:07:37] 2025-06-04 04:07:18,585 | INFO     | pid: 1966
[2025-06-04 00:07:37] 2025-06-04 04:07:18,585 | INFO     | pgrp: 1966
[2025-06-04 00:07:37] 2025-06-04 04:07:18,585 | INFO     | corecount: 12
[2025-06-04 00:07:37] 2025-06-04 04:07:18,585 | INFO     | event service: False
[2025-06-04 00:07:37] 2025-06-04 04:07:18,585 | INFO     | sizes: {0: 2405184, 5: 2405390, 11: 2405446, 4004: 2431232, 4006: 2440173, 4009: 2440229, 4014: 2440527}
[2025-06-04 00:07:37] 2025-06-04 04:07:18,585 | INFO     | --------------------------------------------------
[2025-06-04 00:07:37] 2025-06-04 04:07:18,585 | INFO     | 
[2025-06-04 00:07:37] 2025-06-04 04:07:18,586 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 00:07:37] 2025-06-04 04:07:18,589 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6678150914: 4252299 B (within 2537553920 B limit)
[2025-06-04 00:07:37] 2025-06-04 04:07:18,589 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6678150914/HITS.45006595._046815.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 00:07:37] 2025-06-04 04:07:18,589 | INFO     | total size of present files: 0 B (workdir size: 4252299 B)
[2025-06-04 00:07:37] 2025-06-04 04:07:18,590 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6678150914/HITS.45006595._046815.pool.root.1 since it does not exist
[2025-06-04 00:07:37] 2025-06-04 04:07:18,608 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 00:07:37] 2025-06-04 04:07:18,608 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 00:07:37] 2025-06-04 04:07:18,609 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 00:07:37] 2025-06-04 04:07:18,609 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 00:07:37] 2025-06-04 04:07:18,609 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 00:07:37] 2025-06-04 04:07:18,609 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 00:07:37] 2025-06-04 04:07:18,609 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 00:07:37] 2025-06-04 04:07:18,610 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 00:07:37] 2025-06-04 04:07:18,610 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 00:07:37] 2025-06-04 04:07:18,610 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 00:07:37] 2025-06-04 04:07:18,610 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 00:07:37] 2025-06-04 04:07:18,610 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 00:07:37] 2025-06-04 04:07:18,610 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 00:07:37] 2025-06-04 04:07:18,611 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 00:07:37] 2025-06-04 04:07:18,611 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 00:07:37] 2025-06-04 04:07:18,611 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 00:07:37] 2025-06-04 04:07:18,611 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 00:07:37] 2025-06-04 04:07:18,611 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 00:07:37] 2025-06-04 04:07:18,612 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 00:07:37] 2025-06-04 04:07:18,612 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 00:07:37] 2025-06-04 04:07:18,612 | INFO     | job 6678150914 has completed (purged errors)
[2025-06-04 00:07:37] 2025-06-04 04:07:18,612 | INFO     | overall cleanup function is called
[2025-06-04 00:07:37] 2025-06-04 04:07:18,686 | INFO     | number of running child processes to parent process 1966: 1
[2025-06-04 00:07:37] 2025-06-04 04:07:18,686 | INFO     | maximum number of monitored processes: 6
[2025-06-04 00:07:37] 2025-06-04 04:07:18,686 | INFO     | aborting job monitoring since job object (job id=6678150914) has expired
[2025-06-04 00:07:37] 2025-06-04 04:07:19,620 | INFO     | --- collectZombieJob: --- 10, [1966]
[2025-06-04 00:07:37] 2025-06-04 04:07:19,620 | INFO     | zombie collector waiting for pid 1966
[2025-06-04 00:07:37] 2025-06-04 04:07:19,620 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 00:07:37] 2025-06-04 04:07:19,621 | INFO     | collected zombie processes
[2025-06-04 00:07:37] 2025-06-04 04:07:19,621 | INFO     | will attempt to kill all subprocesses of pid=1966
[2025-06-04 00:07:37] 2025-06-04 04:07:19,710 | INFO     | process IDs to be killed: [1966] (in reverse order)
[2025-06-04 00:07:37] 2025-06-04 04:07:19,761 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 00:07:37] 2025-06-04 04:07:19,761 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 00:07:37] 2025-06-04 04:07:19,765 | INFO     | did not find any defunct processes belonging to 1966
[2025-06-04 00:07:37] 2025-06-04 04:07:19,768 | INFO     | did not find any defunct processes belonging to 1966
[2025-06-04 00:07:37] 2025-06-04 04:07:19,769 | INFO     | ready for new job
[2025-06-04 00:07:37] 2025-06-04 04:07:19,769 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 00:07:37] 2025-06-04 04:07:19,770 | INFO     | **************************************
[2025-06-04 00:07:37] 2025-06-04 04:07:19,770 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 00:07:37] 2025-06-04 04:07:19,770 | INFO     | **************************************
[2025-06-04 00:07:37] 2025-06-04 04:07:19,770 | INFO     | 
[2025-06-04 00:07:37] 2025-06-04 04:07:19,771 | INFO     | architecture information:
[2025-06-04 00:07:37] 2025-06-04 04:07:19,771 | INFO     | executing command: cat /etc/os-release
[2025-06-04 00:07:37] 2025-06-04 04:07:19,786 | INFO     | cat /etc/os-release:
[2025-06-04 00:07:37] NAME="CentOS Linux"
[2025-06-04 00:07:37] VERSION="7 (Core)"
[2025-06-04 00:07:37] ID="centos"
[2025-06-04 00:07:37] ID_LIKE="rhel fedora"
[2025-06-04 00:07:37] VERSION_ID="7"
[2025-06-04 00:07:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 00:07:37] ANSI_COLOR="0;31"
[2025-06-04 00:07:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 00:07:37] HOME_URL="https://www.centos.org/"
[2025-06-04 00:07:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 00:07:37] 
[2025-06-04 00:07:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 00:07:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 00:07:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 00:07:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 00:07:37] 
[2025-06-04 00:07:37] 2025-06-04 04:07:19,786 | INFO     | **************************************
[2025-06-04 00:07:37] 2025-06-04 04:07:20,289 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 00:07:37] 2025-06-04 04:07:20,305 | INFO     | sufficient remaining disk space (29478617088 B)
[2025-06-04 00:07:37] 2025-06-04 04:07:20,305 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 00:07:37] 2025-06-04 04:07:20,305 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 00:07:37] 2025-06-04 04:07:20,306 | INFO     | update_server=False
[2025-06-04 00:07:37] 2025-06-04 04:07:20,306 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 00:07:37] 2025-06-04 04:07:20,306 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 00:07:37] 2025-06-04 04:07:20,306 | INFO     | aborting loop
[2025-06-04 00:07:37] 2025-06-04 04:07:20,307 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 00:07:37] 2025-06-04 04:07:20,307 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 00:07:37] 2025-06-04 04:07:20,307 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 00:07:37] 2025-06-04 04:07:20,308 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 00:07:37] 2025-06-04 04:07:20,308 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 00:07:37] 2025-06-04 04:07:20,308 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 00:07:37] 2025-06-04 04:07:20,377 | INFO     | all payload control threads have been joined
[2025-06-04 00:07:37] 2025-06-04 04:07:21,274 | INFO     | all data control threads have been joined
[2025-06-04 00:07:37] 2025-06-04 04:07:21,311 | INFO     | [job] retrieve thread has finished
[2025-06-04 00:07:37] 2025-06-04 04:07:21,312 | INFO     | [job] job monitor thread has finished
[2025-06-04 00:07:37] 2025-06-04 04:07:21,312 | INFO     | [job] queue monitor thread has finished
[2025-06-04 00:07:37] 2025-06-04 04:07:21,383 | INFO     | [payload] control thread has finished
[2025-06-04 00:07:37] 2025-06-04 04:07:21,449 | INFO     | [payload] validate_post thread has finished
[2025-06-04 00:07:37] 2025-06-04 04:07:21,668 | INFO     | all job control threads have been joined
[2025-06-04 00:07:37] 2025-06-04 04:07:21,780 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 00:07:37] 2025-06-04 04:07:21,978 | INFO     | [payload] failed_post thread has finished
[2025-06-04 00:07:37] 2025-06-04 04:07:22,070 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 00:07:37] 2025-06-04 04:07:22,088 | INFO     | [job] validate thread has finished
[2025-06-04 00:07:37] 2025-06-04 04:07:22,160 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 00:07:37] 2025-06-04 04:07:22,280 | INFO     | [data] control thread has finished
[2025-06-04 00:07:37] 2025-06-04 04:07:22,440 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 00:07:37] 2025-06-04 04:07:22,673 | INFO     | [job] control thread has finished
[2025-06-04 00:07:37] 2025-06-04 04:07:22,731 | INFO     | [data] copytool_in thread has finished
[2025-06-04 00:07:37] 2025-06-04 04:07:23,785 | INFO     | [data] copytool_out thread has finished
[2025-06-04 00:07:37] 2025-06-04 04:07:24,313 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 00:07:37] 2025-06-04 04:07:30,451 | INFO     | job.realtimelogging is not enabled
[2025-06-04 00:07:37] 2025-06-04 04:07:31,456 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 00:07:37] 2025-06-04 04:07:32,420 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139768867080000)>', '<ExcThread(monitor, started 139768159528704)>']
[2025-06-04 00:07:37] 2025-06-04 04:07:33,374 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 00:07:37] 2025-06-04 04:07:33,375 | INFO     | [monitor] control thread has ended
[2025-06-04 00:07:37] 2025-06-04 04:07:37,445 | INFO     | all workflow threads have been joined
[2025-06-04 00:07:37] 2025-06-04 04:07:37,446 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 00:07:37] 2025-06-04 04:07:37,446 | INFO     | traces error code: 0
[2025-06-04 00:07:37] 2025-06-04 04:07:37,446 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 00:07:37] 2025-06-04 04:07:37,534 [wrapper] ==== pilot stdout END ====
[2025-06-04 00:07:37] 2025-06-04 04:07:37,538 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 00:07:37] 2025-06-04 04:07:37,542 [wrapper] pilotpid: 27908
[2025-06-04 00:07:37] 2025-06-04 04:07:37,546 [wrapper] Pilot exit status: 0
[2025-06-04 00:07:37] 2025-06-04 04:07:37,562 [wrapper] pandaids: 6678150914
[2025-06-04 00:07:37] 2025-06-04 04:07:37,601 [wrapper] cleanup supervisor_pilot 13026 27909
[2025-06-04 00:07:37] 2025-06-04 04:07:37,605 [wrapper] Test setup, not cleaning
[2025-06-04 00:07:37] 2025-06-04 04:07:37,608 [wrapper] apfmon messages muted
[2025-06-04 00:07:37] 2025-06-04 04:07:37,612 [wrapper] ==== wrapper stdout END ====
[2025-06-04 00:07:37] 2025-06-04 04:07:37,616 [wrapper] ==== wrapper stderr END ====
[2025-06-04 00:07:37]  *** Error codes and diagnostics ***
[2025-06-04 00:07:37]     "exeErrorCode": 0,
[2025-06-04 00:07:37]     "exeErrorDiag": "",
[2025-06-04 00:07:37]     "pilotErrorCode": 0,
[2025-06-04 00:07:37]     "pilotErrorDiag": "",
[2025-06-04 00:07:37]  *** Listing of results directory ***
[2025-06-04 00:07:37] total 397180
[2025-06-04 00:07:37] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 17:57 pilot3.tar.gz
[2025-06-04 00:07:37] -rwx------ 1 boincer umatlas     37140 Jun  3 18:21 runpilot2-wrapper.sh
[2025-06-04 00:07:37] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 18:21 queuedata.json
[2025-06-04 00:07:37] -rw-r--r-- 1 boincer umatlas       100 Jun  3 22:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 00:07:37] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 22:59 run_atlas
[2025-06-04 00:07:37] -rw-r--r-- 1 boincer umatlas       105 Jun  3 22:59 job.xml
[2025-06-04 00:07:37] -rw-r--r-- 2 boincer umatlas 216700930 Jun  3 22:59 EVNT.45006593._001877.pool.root.1
[2025-06-04 00:07:37] -rw-r--r-- 2 boincer umatlas    508880 Jun  3 22:59 input.tar.gz
[2025-06-04 00:07:37] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 22:59 start_atlas.sh
[2025-06-04 00:07:37] drwxrwx--x 2 boincer umatlas      4096 Jun  3 22:59 shared
[2025-06-04 00:07:37] -rw-r--r-- 1 boincer umatlas         0 Jun  3 22:59 boinc_lockfile
[2025-06-04 00:07:37] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 22:59 pandaJob.out
[2025-06-04 00:07:37] -rw------- 1 boincer umatlas    986077 Jun  3 23:00 agis_schedconf.cvmfs.json
[2025-06-04 00:07:37] -rw------- 1 boincer umatlas   1603667 Jun  3 23:00 agis_ddmendpoints.agis.ALL.json
[2025-06-04 00:07:37] drwx------ 4 boincer umatlas      4096 Jun  3 23:00 pilot3
[2025-06-04 00:07:37] -rw-r--r-- 1 boincer umatlas      5866 Jun  4 00:00 init_data.xml
[2025-06-04 00:07:37] -rw------- 1 boincer umatlas 184700706 Jun  4 00:06 HITS.45006595._046815.pool.root.1
[2025-06-04 00:07:37] -rw------- 1 boincer umatlas        95 Jun  4 00:06 pilot_heartbeat.json
[2025-06-04 00:07:37] -rw------- 1 boincer umatlas      1049 Jun  4 00:07 memory_monitor_summary.json
[2025-06-04 00:07:37] -rw------- 1 boincer umatlas    350442 Jun  4 00:07 log.45006595._046815.job.log.tgz.1
[2025-06-04 00:07:37] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 00:07 boinc_mmap_file
[2025-06-04 00:07:37] -rw-r--r-- 1 boincer umatlas        27 Jun  4 00:07 wrapper_checkpoint.txt
[2025-06-04 00:07:37] -rw------- 1 boincer umatlas      7748 Jun  4 00:07 heartbeat.json
[2025-06-04 00:07:37] -rw-r--r-- 1 boincer umatlas       529 Jun  4 00:07 boinc_task_state.xml
[2025-06-04 00:07:37] -rw------- 1 boincer umatlas      4548 Jun  4 00:07 pilotlog.txt
[2025-06-04 00:07:37] -rw------- 1 boincer umatlas    391970 Jun  4 00:07 log.45006595._046815.job.log.1
[2025-06-04 00:07:37] -rw------- 1 boincer umatlas       357 Jun  4 00:07 output.list
[2025-06-04 00:07:37] -rw-r--r-- 1 boincer umatlas       620 Jun  4 00:07 runtime_log
[2025-06-04 00:07:37] -rw------- 1 boincer umatlas    757760 Jun  4 00:07 result.tar.gz
[2025-06-04 00:07:37] -rw-r--r-- 1 boincer umatlas      8656 Jun  4 00:07 runtime_log.err
[2025-06-04 00:07:37] -rw------- 1 boincer umatlas       658 Jun  4 00:07 ISxKDmICpg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmJ7ZKDmpynPLo.diag
[2025-06-04 00:07:37] -rw-r--r-- 1 boincer umatlas     22173 Jun  4 00:07 stderr.txt
[2025-06-04 00:07:37] HITS file was successfully produced:
[2025-06-04 00:07:37] -rw------- 1 boincer umatlas 184700706 Jun  4 00:06 shared/HITS.pool.root.1
[2025-06-04 00:07:37]  *** Contents of shared directory: ***
[2025-06-04 00:07:37] total 393256
[2025-06-04 00:07:37] -rw-r--r-- 2 boincer umatlas 216700930 Jun  3 22:59 ATLAS.root_0
[2025-06-04 00:07:37] -rw-r--r-- 2 boincer umatlas    508880 Jun  3 22:59 input.tar.gz
[2025-06-04 00:07:37] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 22:59 start_atlas.sh
[2025-06-04 00:07:37] -rw------- 1 boincer umatlas 184700706 Jun  4 00:06 HITS.pool.root.1
[2025-06-04 00:07:37] -rw------- 1 boincer umatlas    757760 Jun  4 00:07 result.tar.gz
00:07:38 (24116): run_atlas exited; CPU time 42465.579067
00:07:38 (24116): called boinc_finish(0)

</stderr_txt>
]]>

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