Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:54:15 (2677): wrapper (7.7.26015): starting
13:54:15 (2677): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 13:54:15] Arguments: --nthreads 8
[2025-06-04 13:54:15] Threads: 8
[2025-06-04 13:54:15] Checking for CVMFS
[2025-06-04 13:54:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 13:54:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 13:54:16] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 13:54:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 13:54:18] 2.11.2.0 27084 33162 90512 146779 3 104 14820362 25165824 2745 130560 0 16810907 99.802 19536676 2063 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 13:54:18] CVMFS is ok
[2025-06-04 13:54:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 13:54:18] Checking for apptainer binary...
[2025-06-04 13:54:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 13:54:18] Running /usr/bin/apptainer --version
[2025-06-04 13:54:18] apptainer version 1.3.2-1.el7
[2025-06-04 13:54:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 13:55:50] cg-vwn405.simple-grid.lan
[2025-06-04 13:55:50] apptainer works
[2025-06-04 13:55:50] Set ATHENA_PROC_NUMBER=8
[2025-06-04 13:55:50] Set ATHENA_CORE_NUMBER=8
[2025-06-04 13:55:50] Starting ATLAS job with PandaID=6678152227
[2025-06-04 13:55:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 18:39:42]  *** The last 200 lines of the pilot log: ***
[2025-06-04 18:39:42] 2025-06-04 15:48:54,664 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 18:39:42] 2025-06-04 15:48:54,664 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 18:39:42] 2025-06-04 15:48:54,664 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 18:39:42] 2025-06-04 15:48:54,669 | INFO     | fitting pss+swap vs Time
[2025-06-04 18:39:42] 2025-06-04 15:48:54,670 | INFO     | sum of square deviations: 3212467674.5
[2025-06-04 18:39:42] 2025-06-04 15:48:54,671 | INFO     | sum of deviations: 30577556070.999996
[2025-06-04 18:39:42] 2025-06-04 15:48:54,671 | INFO     | mean x: 1749045382.5
[2025-06-04 18:39:42] 2025-06-04 15:48:54,672 | INFO     | mean y: 2455283.0366972475
[2025-06-04 18:39:42] 2025-06-04 15:48:54,672 | INFO     | -- intersect: -16645660331.83605
[2025-06-04 18:39:42] 2025-06-04 15:48:54,672 | INFO     | intersect: -16645660331.83605
[2025-06-04 18:39:42] 2025-06-04 15:48:54,672 | INFO     | chi2: 2.3526908503462964
[2025-06-04 18:39:42] 2025-06-04 15:48:54,673 | INFO     | sum of square deviations: 2996454322.0
[2025-06-04 18:39:42] 2025-06-04 15:48:54,674 | INFO     | sum of deviations: 43620706244.99999
[2025-06-04 18:39:42] 2025-06-04 15:48:54,675 | INFO     | mean x: 1749045230.0
[2025-06-04 18:39:42] 2025-06-04 15:48:54,675 | INFO     | mean y: 2464301.6244131457
[2025-06-04 18:39:42] 2025-06-04 15:48:54,675 | INFO     | -- intersect: -25459157998.736637
[2025-06-04 18:39:42] 2025-06-04 15:48:54,675 | INFO     | intersect: -25459157998.736637
[2025-06-04 18:39:42] 2025-06-04 15:48:54,675 | INFO     | chi2: 1.583521321242141
[2025-06-04 18:39:42] 2025-06-04 15:48:54,675 | INFO     | current chi2=1.583521321242141 (change=32.69318316900582 %)
[2025-06-04 18:39:42] 2025-06-04 15:48:54,676 | INFO     | sum of square deviations: 2790348132.0
[2025-06-04 18:39:42] 2025-06-04 15:48:54,677 | INFO     | sum of deviations: 41976812700.49999
[2025-06-04 18:39:42] 2025-06-04 15:48:54,678 | INFO     | mean x: 1749045077.5
[2025-06-04 18:39:42] 2025-06-04 15:48:54,678 | INFO     | mean y: 2463085.0721153845
[2025-06-04 18:39:42] 2025-06-04 15:48:54,678 | INFO     | -- intersect: -26309428531.951744
[2025-06-04 18:39:42] 2025-06-04 15:48:54,678 | INFO     | intersect: -26309428531.951744
[2025-06-04 18:39:42] 2025-06-04 15:48:54,678 | INFO     | chi2: 1.5843813602704215
[2025-06-04 18:39:42] 2025-06-04 15:48:54,679 | INFO     | current chi2=1.5843813602704215 (change=-0.05431180602013233 %)
[2025-06-04 18:39:42] 2025-06-04 15:48:54,679 | INFO     | right removable region: 207
[2025-06-04 18:39:42] 2025-06-04 15:48:54,679 | INFO     | sum of square deviations: 2996454322.0
[2025-06-04 18:39:42] 2025-06-04 15:48:54,681 | INFO     | sum of deviations: -5618932223.0
[2025-06-04 18:39:42] 2025-06-04 15:48:54,681 | INFO     | mean x: 1749045535.0
[2025-06-04 18:39:42] 2025-06-04 15:48:54,681 | INFO     | mean y: 2480600.5492957747
[2025-06-04 18:39:42] 2025-06-04 15:48:54,681 | INFO     | -- intersect: 3282279743.139321
[2025-06-04 18:39:42] 2025-06-04 15:48:54,682 | INFO     | intersect: 3282279743.139321
[2025-06-04 18:39:42] 2025-06-04 15:48:54,682 | INFO     | chi2: 0.8034327225652252
[2025-06-04 18:39:42] 2025-06-04 15:48:54,682 | INFO     | current chi2=0.8034327225652252 (change=65.85047617085064 %)
[2025-06-04 18:39:42] 2025-06-04 15:48:54,683 | INFO     | sum of square deviations: 2790348132.0
[2025-06-04 18:39:42] 2025-06-04 15:48:54,684 | INFO     | sum of deviations: -4879596302.0
[2025-06-04 18:39:42] 2025-06-04 15:48:54,685 | INFO     | mean x: 1749045687.5
[2025-06-04 18:39:42] 2025-06-04 15:48:54,685 | INFO     | mean y: 2480061.8365384615
[2025-06-04 18:39:42] 2025-06-04 15:48:54,685 | INFO     | -- intersect: 3061108041.219452
[2025-06-04 18:39:42] 2025-06-04 15:48:54,685 | INFO     | intersect: 3061108041.219452
[2025-06-04 18:39:42] 2025-06-04 15:48:54,685 | INFO     | chi2: 0.7914541003575297
[2025-06-04 18:39:42] 2025-06-04 15:48:54,686 | INFO     | current chi2=0.7914541003575297 (change=1.4909303381930723 %)
[2025-06-04 18:39:42] 2025-06-04 15:48:54,686 | INFO     | left removable region: 20
[2025-06-04 18:39:42] 2025-06-04 15:48:54,686 | INFO     | sum of square deviations: 2027639878.0
[2025-06-04 18:39:42] 2025-06-04 15:48:54,687 | INFO     | sum of deviations: 4928569786.0
[2025-06-04 18:39:42] 2025-06-04 15:48:54,688 | INFO     | mean x: 1749045657.0
[2025-06-04 18:39:42] 2025-06-04 15:48:54,688 | INFO     | mean y: 2491606.4278074866
[2025-06-04 18:39:42] 2025-06-04 15:48:54,688 | INFO     | -- intersect: -4248901194.115998
[2025-06-04 18:39:42] 2025-06-04 15:48:54,688 | INFO     | intersect: -4248901194.115998
[2025-06-04 18:39:42] 2025-06-04 15:48:54,688 | INFO     | chi2: 0.0006089328312623794
[2025-06-04 18:39:42] 2025-06-04 15:48:54,688 | INFO     | -- intersect: -4248901194.115998
[2025-06-04 18:39:42] 2025-06-04 15:48:54,689 | INFO     | current memory leak: 2.43 B/s (using 187 data points, chi2=0.00)
[2025-06-04 18:39:42] 2025-06-04 15:48:54,689 | INFO     | ..............................
[2025-06-04 18:39:42] 2025-06-04 15:48:54,689 | INFO     | . Timing measurements:
[2025-06-04 18:39:42] 2025-06-04 15:48:54,690 | INFO     | . get job = 0 s
[2025-06-04 18:39:42] 2025-06-04 15:48:54,690 | INFO     | . initial setup = 20 s
[2025-06-04 18:39:42] 2025-06-04 15:48:54,690 | INFO     | . payload setup = 149 s
[2025-06-04 18:39:42] 2025-06-04 15:48:54,690 | INFO     | . stage-in = 0 s
[2025-06-04 18:39:42] 2025-06-04 15:48:54,690 | INFO     | . payload execution = 13367 s
[2025-06-04 18:39:42] 2025-06-04 15:48:54,690 | INFO     | . stage-out = 3 s
[2025-06-04 18:39:42] 2025-06-04 15:48:54,690 | INFO     | . log creation = 1 s
[2025-06-04 18:39:42] 2025-06-04 15:48:54,690 | INFO     | ..............................
[2025-06-04 18:39:42] 2025-06-04 15:48:54,825 | INFO     | 
[2025-06-04 18:39:42] 2025-06-04 15:48:54,825 | INFO     | job summary report
[2025-06-04 18:39:42] 2025-06-04 15:48:54,825 | INFO     | --------------------------------------------------
[2025-06-04 18:39:42] 2025-06-04 15:48:54,825 | INFO     | PanDA job id: 6678152227
[2025-06-04 18:39:42] 2025-06-04 15:48:54,825 | INFO     | task id: 45006595
[2025-06-04 18:39:42] 2025-06-04 15:48:54,825 | INFO     | errors: (none)
[2025-06-04 18:39:42] 2025-06-04 15:48:54,825 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 18:39:42] 2025-06-04 15:48:54,826 | INFO     | pilot state: finished 
[2025-06-04 18:39:42] 2025-06-04 15:48:54,826 | INFO     | transexitcode: 0
[2025-06-04 18:39:42] 2025-06-04 15:48:54,826 | INFO     | exeerrorcode: 0
[2025-06-04 18:39:42] 2025-06-04 15:48:54,826 | INFO     | exeerrordiag: 
[2025-06-04 18:39:42] 2025-06-04 15:48:54,826 | INFO     | exitcode: 0
[2025-06-04 18:39:42] 2025-06-04 15:48:54,826 | INFO     | exitmsg: OK
[2025-06-04 18:39:42] 2025-06-04 15:48:54,826 | INFO     | cpuconsumptiontime: 49569 s
[2025-06-04 18:39:42] 2025-06-04 15:48:54,826 | INFO     | nevents: 400
[2025-06-04 18:39:42] 2025-06-04 15:48:54,826 | INFO     | neventsw: 0
[2025-06-04 18:39:42] 2025-06-04 15:48:54,826 | INFO     | pid: 15052
[2025-06-04 18:39:42] 2025-06-04 15:48:54,827 | INFO     | pgrp: 15052
[2025-06-04 18:39:42] 2025-06-04 15:48:54,827 | INFO     | corecount: 8
[2025-06-04 18:39:42] 2025-06-04 15:48:54,827 | INFO     | event service: False
[2025-06-04 18:39:42] 2025-06-04 15:48:54,827 | INFO     | sizes: {0: 2397115, 1: 2397370, 2: 2397370, 12: 2397398, 23: 2397426, 34: 2397454, 45: 2397610, 55: 2397638, 66: 2397666, 77: 2397694, 78: 2397956, 88: 2398292, 13
[2025-06-04 18:39:42] 2025-06-04 15:48:54,827 | INFO     | --------------------------------------------------
[2025-06-04 18:39:42] 2025-06-04 15:48:54,827 | INFO     | 
[2025-06-04 18:39:42] 2025-06-04 15:48:54,827 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-04 18:39:42] 2025-06-04 15:48:54,972 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 18:39:42] 2025-06-04 15:48:54,972 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 18:39:42] 2025-06-04 15:48:54,972 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 18:39:42] 2025-06-04 15:48:54,972 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 18:39:42] 2025-06-04 15:48:54,973 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 18:39:42] 2025-06-04 15:48:54,973 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 18:39:42] 2025-06-04 15:48:54,973 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 18:39:42] 2025-06-04 15:48:54,973 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 18:39:42] 2025-06-04 15:48:54,973 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 18:39:42] 2025-06-04 15:48:54,973 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 18:39:42] 2025-06-04 15:48:54,973 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 18:39:42] 2025-06-04 15:48:54,973 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 18:39:42] 2025-06-04 15:48:54,973 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 18:39:42] 2025-06-04 15:48:54,973 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 18:39:42] 2025-06-04 15:48:54,973 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 18:39:42] 2025-06-04 15:48:54,974 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 18:39:42] 2025-06-04 15:48:54,974 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 18:39:42] 2025-06-04 15:48:54,974 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 18:39:42] 2025-06-04 15:48:54,974 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 18:39:42] 2025-06-04 15:48:54,974 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 18:39:42] 2025-06-04 15:48:54,974 | INFO     | job 6678152227 has completed (purged errors)
[2025-06-04 18:39:42] 2025-06-04 15:48:54,974 | INFO     | overall cleanup function is called
[2025-06-04 18:39:42] 2025-06-04 15:48:55,989 | INFO     | --- collectZombieJob: --- 10, [15052]
[2025-06-04 18:39:42] 2025-06-04 15:48:55,990 | INFO     | zombie collector waiting for pid 15052
[2025-06-04 18:39:42] 2025-06-04 15:48:55,990 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 18:39:42] 2025-06-04 15:48:55,990 | INFO     | collected zombie processes
[2025-06-04 18:39:42] 2025-06-04 15:48:55,990 | INFO     | will attempt to kill all subprocesses of pid=15052
[2025-06-04 18:39:42] 2025-06-04 15:48:56,095 | INFO     | process IDs to be killed: [15052] (in reverse order)
[2025-06-04 18:39:42] 2025-06-04 15:48:56,714 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 18:39:42] 2025-06-04 15:48:56,714 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 18:39:42] 2025-06-04 15:48:56,718 | INFO     | did not find any defunct processes belonging to 15052
[2025-06-04 18:39:42] 2025-06-04 15:48:56,721 | INFO     | did not find any defunct processes belonging to 15052
[2025-06-04 18:39:42] 2025-06-04 15:48:56,721 | INFO     | ready for new job
[2025-06-04 18:39:42] 2025-06-04 15:48:56,721 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 18:39:42] 2025-06-04 15:48:56,723 | INFO     | **************************************
[2025-06-04 18:39:42] 2025-06-04 15:48:56,724 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 18:39:42] 2025-06-04 15:48:56,724 | INFO     | **************************************
[2025-06-04 18:39:42] 2025-06-04 15:48:56,724 | INFO     | 
[2025-06-04 18:39:42] 2025-06-04 15:48:56,724 | INFO     | pilot is running in a VM
[2025-06-04 18:39:42] 2025-06-04 15:48:56,724 | INFO     | architecture information:
[2025-06-04 18:39:42] 2025-06-04 15:48:56,726 | INFO     | executing command: cat /etc/os-release
[2025-06-04 18:39:42] 2025-06-04 15:48:56,996 | INFO     | cat /etc/os-release:
[2025-06-04 18:39:42] NAME="CentOS Linux"
[2025-06-04 18:39:42] VERSION="7 (Core)"
[2025-06-04 18:39:42] ID="centos"
[2025-06-04 18:39:42] ID_LIKE="rhel fedora"
[2025-06-04 18:39:42] VERSION_ID="7"
[2025-06-04 18:39:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 18:39:42] ANSI_COLOR="0;31"
[2025-06-04 18:39:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 18:39:42] HOME_URL="https://www.centos.org/"
[2025-06-04 18:39:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 18:39:42] 
[2025-06-04 18:39:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 18:39:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 18:39:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 18:39:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 18:39:42] 
[2025-06-04 18:39:42] 2025-06-04 15:48:56,996 | INFO     | **************************************
[2025-06-04 18:39:42] 2025-06-04 15:48:57,500 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-04 18:39:42] 2025-06-04 15:48:57,737 | INFO     | sufficient remaining disk space (496749248512 B)
[2025-06-04 18:39:42] 2025-06-04 15:48:57,737 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 18:39:42] 2025-06-04 15:48:57,738 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 18:39:42] 2025-06-04 15:48:57,738 | INFO     | update_server=False
[2025-06-04 18:39:42] 2025-06-04 15:48:57,738 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 18:39:42] 2025-06-04 15:48:57,738 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 18:39:42] 2025-06-04 15:48:57,739 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 18:39:42] 2025-06-04 15:48:57,739 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 18:39:42] 2025-06-04 15:48:57,739 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 18:39:42] 2025-06-04 15:48:58,131 | INFO     | all data control threads have been joined
[2025-06-04 18:39:42] 2025-06-04 15:48:58,202 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 18:39:42] 2025-06-04 15:48:58,203 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 18:39:42] 2025-06-04 15:48:58,203 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:39:42] 2025-06-04 15:48:58,203 | INFO     | will abort loop
[2025-06-04 18:39:42] 2025-06-04 15:48:58,208 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 18:39:42] 2025-06-04 15:48:58,449 | INFO     | all job control threads have been joined
[2025-06-04 18:39:42] 2025-06-04 15:48:58,490 | INFO     | all payload control threads have been joined
[2025-06-04 18:39:42] 2025-06-04 15:48:58,744 | INFO     | [job] retrieve thread has finished
[2025-06-04 18:39:42] 2025-06-04 15:48:58,762 | INFO     | [payload] validate_post thread has finished
[2025-06-04 18:39:42] 2025-06-04 15:48:58,780 | INFO     | [payload] failed_post thread has finished
[2025-06-04 18:39:42] 2025-06-04 15:48:58,867 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 18:39:42] 2025-06-04 15:48:58,999 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 18:39:42] 2025-06-04 15:48:59,094 | INFO     | [data] copytool_in thread has finished
[2025-06-04 18:39:42] 2025-06-04 15:48:59,137 | INFO     | [data] control thread has finished
[2025-06-04 18:39:42] 2025-06-04 15:48:59,212 | INFO     | [job] job monitor thread has finished
[2025-06-04 18:39:42] 2025-06-04 15:48:59,272 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 18:39:42] 2025-06-04 15:48:59,455 | INFO     | [job] control thread has finished
[2025-06-04 18:39:42] 2025-06-04 15:48:59,496 | INFO     | [payload] control thread has finished
[2025-06-04 18:39:42] 2025-06-04 15:48:59,499 | INFO     | [job] validate thread has finished
[2025-06-04 18:39:42] 2025-06-04 15:48:59,844 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:39:42] 2025-06-04 15:48:59,905 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 18:39:42] 2025-06-04 15:48:59,910 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 18:39:42] 2025-06-04 15:49:00,215 | INFO     | [data] copytool_out thread has finished
[2025-06-04 18:39:42] 2025-06-04 15:49:00,849 | INFO     | [job] queue monitor thread has finished
[2025-06-04 18:39:42] 2025-06-04 15:49:02,875 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 18:39:42] 2025-06-04 15:49:03,612 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140599276402496)>', '<ExcThread(monitor, started 140598547826432)>']
[2025-06-04 18:39:42] 2025-06-04 15:49:03,774 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 18:39:42] 2025-06-04 15:49:03,775 | INFO     | [monitor] control thread has ended
[2025-06-04 18:39:42] 2025-06-04 15:49:08,638 | INFO     | all workflow threads have been joined
[2025-06-04 18:39:42] 2025-06-04 15:49:08,639 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 18:39:42] 2025-06-04 15:49:08,639 | INFO     | traces error code: 0
[2025-06-04 18:39:42] 2025-06-04 15:49:08,639 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 18:39:42] 2025-06-04 15:49:08,951 [wrapper] ==== pilot stdout END ====
[2025-06-04 18:39:42] 2025-06-04 15:49:08,994 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 18:39:42] 2025-06-04 15:49:09,021 [wrapper] pilotpid: 8432
[2025-06-04 18:39:42] 2025-06-04 15:49:09,059 [wrapper] Pilot exit status: 0
[2025-06-04 18:39:42] 2025-06-04 15:49:09,493 [wrapper] pandaids: 6678152227
[2025-06-04 18:39:42] 2025-06-04 15:49:10,472 [wrapper] cleanup supervisor_pilot 31509 8433
[2025-06-04 18:39:42] 2025-06-04 15:49:10,570 [wrapper] Test setup, not cleaning
[2025-06-04 18:39:42] 2025-06-04 15:49:10,685 [wrapper] apfmon messages muted
[2025-06-04 18:39:42] 2025-06-04 15:49:10,821 [wrapper] ==== wrapper stdout END ====
[2025-06-04 18:39:42] 2025-06-04 15:49:10,914 [wrapper] ==== wrapper stderr END ====
[2025-06-04 18:39:42]  *** Error codes and diagnostics ***
[2025-06-04 18:39:42]     "exeErrorCode": 0,
[2025-06-04 18:39:42]     "exeErrorDiag": "",
[2025-06-04 18:39:42]     "pilotErrorCode": 0,
[2025-06-04 18:39:42]     "pilotErrorDiag": "",
[2025-06-04 18:39:42]  *** Listing of results directory ***
[2025-06-04 18:39:42] total 385008
[2025-06-04 18:39:42] -rw-r--r--. 1 boinc boinc    495897 Jun  3 23:57 pilot3.tar.gz
[2025-06-04 18:39:42] -rw-r--r--. 1 boinc boinc      5111 Jun  4 00:31 queuedata.json
[2025-06-04 18:39:42] -rwx------. 1 boinc boinc     37140 Jun  4 00:31 runpilot2-wrapper.sh
[2025-06-04 18:39:42] -rw-r--r--. 1 boinc boinc       100 Jun  4 13:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 18:39:42] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 13:54 run_atlas
[2025-06-04 18:39:42] -rw-r--r--. 1 boinc boinc       105 Jun  4 13:54 job.xml
[2025-06-04 18:39:42] -rw-r--r--. 1 boinc boinc      6392 Jun  4 13:54 init_data.xml
[2025-06-04 18:39:42] -rw-r--r--. 2 boinc boinc 212726479 Jun  4 13:54 EVNT.45006593._001884.pool.root.1
[2025-06-04 18:39:42] -rw-r--r--. 2 boinc boinc     15093 Jun  4 13:54 start_atlas.sh
[2025-06-04 18:39:42] drwxrwx--x. 2 boinc boinc        68 Jun  4 13:54 shared
[2025-06-04 18:39:42] -rw-r--r--. 2 boinc boinc    508887 Jun  4 13:54 input.tar.gz
[2025-06-04 18:39:42] -rw-r--r--. 1 boinc boinc         0 Jun  4 13:54 boinc_lockfile
[2025-06-04 18:39:42] -rw-r--r--. 1 boinc boinc      2525 Jun  4 13:55 pandaJob.out
[2025-06-04 18:39:42] -rw-------. 1 boinc boinc    986812 Jun  4 13:58 agis_schedconf.cvmfs.json
[2025-06-04 18:39:42] drwx------. 4 boinc boinc      4096 Jun  4 13:59 pilot3
[2025-06-04 18:39:42] -rw-------. 1 boinc boinc 174548269 Jun  4 17:46 HITS.45006595._047004.pool.root.1
[2025-06-04 18:39:42] -rw-r--r--. 1 boinc boinc       531 Jun  4 17:46 boinc_task_state.xml
[2025-06-04 18:39:42] -rw-------. 1 boinc boinc      1030 Jun  4 17:47 memory_monitor_summary.json
[2025-06-04 18:39:42] -rw-------. 1 boinc boinc   1598969 Jun  4 17:47 agis_ddmendpoints.agis.ALL.json
[2025-06-04 18:39:42] -rw-------. 1 boinc boinc    392746 Jun  4 17:47 log.45006595._047004.job.log.tgz.1
[2025-06-04 18:39:42] -rw-------. 1 boinc boinc        95 Jun  4 17:48 pilot_heartbeat.json
[2025-06-04 18:39:42] -rw-------. 1 boinc boinc      7686 Jun  4 17:48 heartbeat.json
[2025-06-04 18:39:42] -rw-------. 1 boinc boinc      4725 Jun  4 17:49 pilotlog.txt
[2025-06-04 18:39:42] -rw-------. 1 boinc boinc   1189076 Jun  4 17:49 log.45006595._047004.job.log.1
[2025-06-04 18:39:42] -rw-------. 1 boinc boinc       357 Jun  4 17:49 output.list
[2025-06-04 18:39:42] -rw-r--r--. 1 boinc boinc       620 Jun  4 17:49 runtime_log
[2025-06-04 18:39:42] -rw-------. 1 boinc boinc   1597440 Jun  4 17:49 result.tar.gz
[2025-06-04 18:39:42] -rw-r--r--. 1 boinc boinc      8659 Jun  4 17:49 runtime_log.err
[2025-06-04 18:39:42] -rw-------. 1 boinc boinc       656 Jun  4 17:49 lwoNDmELpg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm18ZKDmKJv1Hm.diag
[2025-06-04 18:39:42] -rw-r--r--. 1 boinc boinc      8192 Jun  4 18:39 boinc_mmap_file
[2025-06-04 18:39:42] -rw-r--r--. 1 boinc boinc        28 Jun  4 18:39 wrapper_checkpoint.txt
[2025-06-04 18:39:42] -rw-r--r--. 1 boinc boinc     20475 Jun  4 18:39 stderr.txt
[2025-06-04 18:39:43] HITS file was successfully produced:
[2025-06-04 18:39:43] -rw-------. 1 boinc boinc 174548269 Jun  4 17:46 shared/HITS.pool.root.1
[2025-06-04 18:39:43]  *** Contents of shared directory: ***
[2025-06-04 18:39:43] total 380280
[2025-06-04 18:39:43] -rw-r--r--. 2 boinc boinc 212726479 Jun  4 13:54 ATLAS.root_0
[2025-06-04 18:39:43] -rw-r--r--. 2 boinc boinc     15093 Jun  4 13:54 start_atlas.sh
[2025-06-04 18:39:43] -rw-r--r--. 2 boinc boinc    508887 Jun  4 13:54 input.tar.gz
[2025-06-04 18:39:43] -rw-------. 1 boinc boinc 174548269 Jun  4 17:46 HITS.pool.root.1
[2025-06-04 18:39:43] -rw-------. 1 boinc boinc   1597440 Jun  4 17:49 result.tar.gz
18:39:44 (2677): run_atlas exited; CPU time 49752.897022
18:39:44 (2677): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN