Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:04:41 (3301031): wrapper (7.7.26015): starting
20:04:41 (3301031): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 20:04:41] Arguments: --nthreads 12
[2025-06-03 20:04:41] Threads: 12
[2025-06-03 20:04:41] Checking for CVMFS
[2025-06-03 20:04:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 20:04:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 20:04:41] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 20:04:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 20:04:42] 2.11.5.0 1164527 32516 243180 146765 0 774 40271595 45568000 10368 130560 0 258527737 99.781 169757874 24592 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 20:04:42] CVMFS is ok
[2025-06-03 20:04:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 20:04:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 20:04:42] Further information can be found at the LHC@home message board.
[2025-06-03 20:04:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 20:04:42] Checking for apptainer binary...
[2025-06-03 20:04:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 20:04:42] Running /usr/bin/apptainer --version
[2025-06-03 20:04:42] apptainer version 1.4.0-1.el9
[2025-06-03 20:04:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 20:04:42] wns0114.triumf.lcg
[2025-06-03 20:04:42] apptainer works
[2025-06-03 20:04:42] Set ATHENA_PROC_NUMBER=12
[2025-06-03 20:04:42] Set ATHENA_CORE_NUMBER=12
[2025-06-03 20:04:42] Starting ATLAS job with PandaID=6678215862
[2025-06-03 20:04:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 20:08:02]  *** The last 200 lines of the pilot log: ***
[2025-06-03 20:08:02] 2025-06-04 03:07:49,165 | INFO     | extracted standard info from prmon json
[2025-06-03 20:08:02] 2025-06-04 03:07:49,165 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 20:08:02] 2025-06-04 03:07:49,165 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 20:08:02] 2025-06-04 03:07:49,166 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 20:08:02] 2025-06-04 03:07:49,166 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 20:08:02] 2025-06-04 03:07:49,167 | WARNING  | found no stored workdir sizes
[2025-06-03 20:08:02] 2025-06-04 03:07:49,167 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 20:08:02] 2025-06-04 03:07:49,168 | WARNING  | wrong length of table data, x=[1749006327.0], y=[1120.0] (must be same and length>=4)
[2025-06-03 20:08:02] 2025-06-04 03:07:49,169 | INFO     | ..............................
[2025-06-03 20:08:02] 2025-06-04 03:07:49,169 | INFO     | . Timing measurements:
[2025-06-03 20:08:02] 2025-06-04 03:07:49,169 | INFO     | . get job = 0 s
[2025-06-03 20:08:02] 2025-06-04 03:07:49,169 | INFO     | . initial setup = 3 s
[2025-06-03 20:08:02] 2025-06-04 03:07:49,169 | INFO     | . payload setup = 8 s
[2025-06-03 20:08:02] 2025-06-04 03:07:49,170 | INFO     | . stage-in = 0 s
[2025-06-03 20:08:02] 2025-06-04 03:07:49,170 | INFO     | . payload execution = 20 s
[2025-06-03 20:08:02] 2025-06-04 03:07:49,170 | INFO     | . stage-out = 0 s
[2025-06-03 20:08:02] 2025-06-04 03:07:49,170 | INFO     | . log creation = 0 s
[2025-06-03 20:08:02] 2025-06-04 03:07:49,170 | INFO     | ..............................
[2025-06-03 20:08:02] 2025-06-04 03:07:49,170 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 20:08:02] 2025-06-04 03:07:49,171 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678215862/pilotlog.txt
[2025-06-03 20:08:02] 2025-06-04 03:07:49,188 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 20:08:02] - Log from pilotlog.txt -
[2025-06-03 20:08:02] 2025-06-04 03:07:49,165 | INFO     | extracted standard info from prmon json
[2025-06-03 20:08:02] 2025-06-04 03:07:49,165 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 20:08:02] 2025-06-04 03:07:49,165 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 20:08:02] 2025-06-04 03:07:49,166 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 20:08:02] 2025-06-04 03:07:49,166 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 20:08:02] 2025-06-04 03:07:49,167 | WARNING  | found no stored workdir sizes
[2025-06-03 20:08:02] 2025-06-04 03:07:49,167 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 20:08:02] 2025-06-04 03:07:49,168 | WARNING  | wrong length of table data, x=[1749006327.0], y=[1120.0] (must be same and length>=4)
[2025-06-03 20:08:02] 2025-06-04 03:07:49,169 | INFO     | ..............................
[2025-06-03 20:08:02] 2025-06-04 03:07:49,169 | INFO     | . Timing measurements:
[2025-06-03 20:08:02] 2025-06-04 03:07:49,169 | INFO     | . get job = 0 s
[2025-06-03 20:08:02] 2025-06-04 03:07:49,169 | INFO     | . initial setup = 3 s
[2025-06-03 20:08:02] 2025-06-04 03:07:49,169 | INFO     | . payload setup = 8 s
[2025-06-03 20:08:02] 2025-06-04 03:07:49,170 | INFO     | . stage-in = 0 s
[2025-06-03 20:08:02] 2025-06-04 03:07:49,170 | INFO     | . payload execution = 20 s
[2025-06-03 20:08:02] 2025-06-04 03:07:49,170 | INFO     | . stage-out = 0 s
[2025-06-03 20:08:02] 2025-06-04 03:07:49,170 | INFO     | . log creation = 0 s
[2025-06-03 20:08:02] 2025-06-04 03:07:49,170 | INFO     | ..............................
[2025-06-03 20:08:02] 2025-06-04 03:07:49,170 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 20:08:02] 2025-06-04 03:07:49,171 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678215862/pilotlog.txt
[2025-06-03 20:08:02] 2025-06-04 03:07:49,189 | WARNING  | 
[2025-06-03 20:08:02] [begin log extracts]
[2025-06-03 20:08:02] - Log from pilotlog.txt -
[2025-06-03 20:08:02] 2025-06-04 03:07:49,165 | INFO     | extracted standard info from prmon json
[2025-06-03 20:08:02] 2025-06-04 03:07:49,165 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 20:08:02] 2025-06-04 03:07:49,165 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 20:08:02] 2025-06-04 03:07:49,166 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 20:08:02] 2025-06-04 03:07:49,166 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 20:08:02] 2025-06-04 03:07:49,167 | WARNING  | found no stored workdir sizes
[2025-06-03 20:08:02] 2025-06-04 03:07:49,167 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 20:08:02] 2025-06-04 03:07:49,168 | WARNING  | wrong length of table data, x=[1749006327.0], y=[1120.0] (must be same and length>=4)
[2025-06-03 20:08:02] 2025-06-04 03:07:49,169 | INFO     | ..............................
[2025-06-03 20:08:02] 2025-06-04 03:07:49,169 | INFO     | . Timing measurements:
[2025-06-03 20:08:02] 2025-06-04 03:07:49,169 | INFO     | . get job = 0 s
[2025-06-03 20:08:02] 2025-06-04 03:07:49,169 | INFO     | . initial setup = 3 s
[2025-06-03 20:08:02] 2025-06-04 03:07:49,169 | INFO     | . payload setup = 8 s
[2025-06-03 20:08:02] 2025-06-04 03:07:49,170 | INFO     | . stage-in = 0 s
[2025-06-03 20:08:02] 2025-06-04 03:07:49,170 | INFO     | . payload execution = 20 s
[2025-06-03 20:08:02] 2025-06-04 03:07:49,170 | INFO     | . stage-out = 0 s
[2025-06-03 20:08:02] 2025-06-04 03:07:49,170 | INFO     | . log creation = 0 s
[2025-06-03 20:08:02] 2025-06-04 03:07:49,170 | INFO     | ..............................
[2025-06-03 20:08:02] 2025-06-04 03:07:49,170 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 20:08:02] 2025-06-04 03:07:49,171 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678215862/pilotlog.txt
[2025-06-03 20:08:02] [end log extracts]
[2025-06-03 20:08:02] 2025-06-04 03:07:49,189 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 20:08:02] 2025-06-04 03:07:49,191 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 20:08:02] 2025-06-04 03:07:49,270 | INFO     | 
[2025-06-03 20:08:02] 2025-06-04 03:07:49,271 | INFO     | job summary report
[2025-06-03 20:08:02] 2025-06-04 03:07:49,271 | INFO     | --------------------------------------------------
[2025-06-03 20:08:02] 2025-06-04 03:07:49,271 | INFO     | PanDA job id: 6678215862
[2025-06-03 20:08:02] 2025-06-04 03:07:49,271 | INFO     | task id: 45006595
[2025-06-03 20:08:02] 2025-06-04 03:07:49,271 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 20:05:37,709 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 20:08:02] 2025-06-04 03:07:49,271 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 20:08:02] 2025-06-04 03:07:49,271 | INFO     | pilot state: failed 
[2025-06-03 20:08:02] 2025-06-04 03:07:49,271 | INFO     | transexitcode: 65
[2025-06-03 20:08:02] 2025-06-04 03:07:49,272 | INFO     | exeerrorcode: 65
[2025-06-03 20:08:02] 2025-06-04 03:07:49,272 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 20:08:02] 2025-06-04 03:07:49,272 | INFO     | exitcode: 65
[2025-06-03 20:08:02] 2025-06-04 03:07:49,272 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 20:08:02] 2025-06-04 03:07:49,272 | INFO     | cpuconsumptiontime: 26 s
[2025-06-03 20:08:02] 2025-06-04 03:07:49,272 | INFO     | nevents: 0
[2025-06-03 20:08:02] 2025-06-04 03:07:49,272 | INFO     | neventsw: 0
[2025-06-03 20:08:02] 2025-06-04 03:07:49,272 | INFO     | pid: 3314072
[2025-06-03 20:08:02] 2025-06-04 03:07:49,273 | INFO     | pgrp: 3314072
[2025-06-03 20:08:02] 2025-06-04 03:07:49,273 | INFO     | corecount: 12
[2025-06-03 20:08:02] 2025-06-04 03:07:49,273 | INFO     | event service: False
[2025-06-03 20:08:02] 2025-06-04 03:07:49,273 | INFO     | sizes: {0: 2404356, 1: 2405209, 7: 2405415, 12: 2405443, 32: 2432911, 35: 2432911, 156: 2433181}
[2025-06-03 20:08:02] 2025-06-04 03:07:49,273 | INFO     | --------------------------------------------------
[2025-06-03 20:08:02] 2025-06-04 03:07:49,273 | INFO     | 
[2025-06-03 20:08:02] 2025-06-04 03:07:49,273 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 20:08:02] 2025-06-04 03:07:49,299 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 20:08:02] 2025-06-04 03:07:49,299 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 20:08:02] 2025-06-04 03:07:49,299 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 20:08:02] 2025-06-04 03:07:49,299 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 20:08:02] 2025-06-04 03:07:49,299 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 20:08:02] 2025-06-04 03:07:49,299 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 20:08:02] 2025-06-04 03:07:49,299 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 20:08:02] 2025-06-04 03:07:49,299 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 20:08:02] 2025-06-04 03:07:49,300 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 20:08:02] 2025-06-04 03:07:49,300 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 20:08:02] 2025-06-04 03:07:49,300 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 20:08:02] 2025-06-04 03:07:49,300 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 20:08:02] 2025-06-04 03:07:49,300 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 20:08:02] 2025-06-04 03:07:49,300 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 20:08:02] 2025-06-04 03:07:49,300 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 20:08:02] 2025-06-04 03:07:49,300 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 20:08:02] 2025-06-04 03:07:49,300 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 20:08:02] 2025-06-04 03:07:49,300 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 20:08:02] 2025-06-04 03:07:49,300 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 20:08:02] 2025-06-04 03:07:49,300 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 20:08:02] 2025-06-04 03:07:49,300 | INFO     | job 6678215862 has completed (purged errors)
[2025-06-03 20:08:02] 2025-06-04 03:07:49,301 | INFO     | overall cleanup function is called
[2025-06-03 20:08:02] 2025-06-04 03:07:50,307 | INFO     | --- collectZombieJob: --- 10, [3314072]
[2025-06-03 20:08:02] 2025-06-04 03:07:50,308 | INFO     | zombie collector waiting for pid 3314072
[2025-06-03 20:08:02] 2025-06-04 03:07:50,308 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 20:08:02] 2025-06-04 03:07:50,309 | INFO     | collected zombie processes
[2025-06-03 20:08:02] 2025-06-04 03:07:50,309 | INFO     | will attempt to kill all subprocesses of pid=3314072
[2025-06-03 20:08:02] 2025-06-04 03:07:50,543 | INFO     | process IDs to be killed: [3314072] (in reverse order)
[2025-06-03 20:08:02] 2025-06-04 03:07:50,633 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 20:08:02] 2025-06-04 03:07:50,634 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 20:08:02] 2025-06-04 03:07:50,647 | INFO     | did not find any defunct processes belonging to 3314072
[2025-06-03 20:08:02] 2025-06-04 03:07:50,655 | INFO     | did not find any defunct processes belonging to 3314072
[2025-06-03 20:08:02] 2025-06-04 03:07:50,655 | INFO     | ready for new job
[2025-06-03 20:08:02] 2025-06-04 03:07:50,656 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 20:08:02] 2025-06-04 03:07:50,657 | INFO     | **************************************
[2025-06-03 20:08:02] 2025-06-04 03:07:50,657 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 20:08:02] 2025-06-04 03:07:50,657 | INFO     | **************************************
[2025-06-03 20:08:02] 2025-06-04 03:07:50,657 | INFO     | 
[2025-06-03 20:08:02] 2025-06-04 03:07:50,660 | INFO     | architecture information:
[2025-06-03 20:08:02] 2025-06-04 03:07:50,661 | INFO     | executing command: cat /etc/os-release
[2025-06-03 20:08:02] 2025-06-04 03:07:50,679 | INFO     | cat /etc/os-release:
[2025-06-03 20:08:02] NAME="CentOS Linux"
[2025-06-03 20:08:02] VERSION="7 (Core)"
[2025-06-03 20:08:02] ID="centos"
[2025-06-03 20:08:02] ID_LIKE="rhel fedora"
[2025-06-03 20:08:02] VERSION_ID="7"
[2025-06-03 20:08:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 20:08:02] ANSI_COLOR="0;31"
[2025-06-03 20:08:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 20:08:02] HOME_URL="https://www.centos.org/"
[2025-06-03 20:08:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 20:08:02] 
[2025-06-03 20:08:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 20:08:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 20:08:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 20:08:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 20:08:02] 
[2025-06-03 20:08:02] 2025-06-04 03:07:50,680 | INFO     | **************************************
[2025-06-03 20:08:02] 2025-06-04 03:07:51,183 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 20:08:02] 2025-06-04 03:07:51,206 | INFO     | sufficient remaining disk space (1991195492352 B)
[2025-06-03 20:08:02] 2025-06-04 03:07:51,207 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 20:08:02] 2025-06-04 03:07:51,207 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 20:08:02] 2025-06-04 03:07:51,207 | INFO     | update_server=False
[2025-06-03 20:08:02] 2025-06-04 03:07:51,208 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 20:08:02] 2025-06-04 03:07:51,208 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 20:08:02] 2025-06-04 03:07:51,208 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:08:02] 2025-06-04 03:07:51,209 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 20:08:02] 2025-06-04 03:07:51,268 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 20:08:02] 2025-06-04 03:07:51,269 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 20:08:02] 2025-06-04 03:07:51,269 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 20:08:02] 2025-06-04 03:07:51,273 | INFO     | all data control threads have been joined
[2025-06-03 20:08:02] 2025-06-04 03:07:51,528 | INFO     | all job control threads have been joined
[2025-06-03 20:08:02] 2025-06-04 03:07:51,855 | INFO     | all payload control threads have been joined
[2025-06-03 20:08:02] 2025-06-04 03:07:52,052 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 20:08:02] 2025-06-04 03:07:52,053 | INFO     | aborting loop
[2025-06-03 20:08:02] 2025-06-04 03:07:52,213 | INFO     | [job] retrieve thread has finished
[2025-06-03 20:08:02] 2025-06-04 03:07:52,215 | INFO     | [job] queue monitor thread has finished
[2025-06-03 20:08:02] 2025-06-04 03:07:52,278 | INFO     | [data] control thread has finished
[2025-06-03 20:08:02] 2025-06-04 03:07:52,459 | INFO     | [payload] failed_post thread has finished
[2025-06-03 20:08:02] 2025-06-04 03:07:52,533 | INFO     | [job] control thread has finished
[2025-06-03 20:08:02] 2025-06-04 03:07:52,860 | INFO     | [payload] control thread has finished
[2025-06-03 20:08:02] 2025-06-04 03:07:52,953 | INFO     | [payload] validate_post thread has finished
[2025-06-03 20:08:02] 2025-06-04 03:07:53,058 | INFO     | [job] job monitor thread has finished
[2025-06-03 20:08:02] 2025-06-04 03:07:53,178 | INFO     | [job] validate thread has finished
[2025-06-03 20:08:02] 2025-06-04 03:07:53,214 | INFO     | [data] copytool_out thread has finished
[2025-06-03 20:08:02] 2025-06-04 03:07:53,254 | INFO     | [data] copytool_in thread has finished
[2025-06-03 20:08:02] 2025-06-04 03:07:53,409 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 20:08:02] 2025-06-04 03:07:53,450 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 20:08:02] 2025-06-04 03:07:53,535 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 20:08:02] 2025-06-04 03:07:53,637 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 20:08:02] 2025-06-04 03:07:55,216 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 20:08:02] 2025-06-04 03:07:57,199 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139838569031488)>', '<ExcThread(monitor, started 139837759813376)>']
[2025-06-03 20:08:02] 2025-06-04 03:07:57,296 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 20:08:02] 2025-06-04 03:07:57,296 | INFO     | [monitor] control thread has ended
[2025-06-03 20:08:02] 2025-06-04 03:08:02,224 | INFO     | all workflow threads have been joined
[2025-06-03 20:08:02] 2025-06-04 03:08:02,225 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 20:08:02] 2025-06-04 03:08:02,225 | INFO     | traces error code: 0
[2025-06-03 20:08:02] 2025-06-04 03:08:02,226 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 20:08:02] 2025-06-04 03:08:02,375 [wrapper] ==== pilot stdout END ====
[2025-06-03 20:08:02] 2025-06-04 03:08:02,379 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 20:08:02] 2025-06-04 03:08:02,383 [wrapper] pilotpid: 3305794
[2025-06-03 20:08:02] 2025-06-04 03:08:02,388 [wrapper] Pilot exit status: 0
[2025-06-03 20:08:02] 2025-06-04 03:08:02,400 [wrapper] pandaids: 6678215862
[2025-06-03 20:08:02] 2025-06-04 03:08:02,463 [wrapper] cleanup supervisor_pilot 3305800 3305795
[2025-06-03 20:08:02] 2025-06-04 03:08:02,466 [wrapper] Test setup, not cleaning
[2025-06-03 20:08:02] 2025-06-04 03:08:02,471 [wrapper] apfmon messages muted
[2025-06-03 20:08:02] 2025-06-04 03:08:02,475 [wrapper] ==== wrapper stdout END ====
[2025-06-03 20:08:02] 2025-06-04 03:08:02,482 [wrapper] ==== wrapper stderr END ====
[2025-06-03 20:08:02]  *** Error codes and diagnostics ***
[2025-06-03 20:08:02]     "exeErrorCode": 65,
[2025-06-03 20:08:02]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 20:08:02]     "pilotErrorCode": 1305,
[2025-06-03 20:08:02]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 20:08:02]  *** Listing of results directory ***
[2025-06-03 20:08:02] total 212920
[2025-06-03 20:08:02] -rw-r--r--. 1 boinc boinc    495897 Jun  3 16:58 pilot3.tar.gz
[2025-06-03 20:08:02] -rwx------. 1 boinc boinc     37140 Jun  3 17:41 runpilot2-wrapper.sh
[2025-06-03 20:08:02] -rw-r--r--. 1 boinc boinc      5111 Jun  3 17:41 queuedata.json
[2025-06-03 20:08:02] -rw-r--r--. 1 boinc boinc       100 Jun  3 20:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 20:08:02] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 20:04 run_atlas
[2025-06-03 20:08:02] -rw-r--r--. 1 boinc boinc       105 Jun  3 20:04 job.xml
[2025-06-03 20:08:02] -rw-r--r--. 1 boinc boinc      6597 Jun  3 20:04 init_data.xml
[2025-06-03 20:08:02] -rw-r--r--. 2 boinc boinc 214009192 Jun  3 20:04 EVNT.45006593._001969.pool.root.1
[2025-06-03 20:08:02] drwxrwx--x. 2 boinc boinc      4096 Jun  3 20:04 shared
[2025-06-03 20:08:02] -rw-r--r--. 2 boinc boinc    508882 Jun  3 20:04 input.tar.gz
[2025-06-03 20:08:02] -rw-r--r--. 2 boinc boinc     15093 Jun  3 20:04 start_atlas.sh
[2025-06-03 20:08:02] -rw-r--r--. 1 boinc boinc         0 Jun  3 20:04 boinc_lockfile
[2025-06-03 20:08:02] -rw-r--r--. 1 boinc boinc      2525 Jun  3 20:04 pandaJob.out
[2025-06-03 20:08:02] -rw-------. 1 boinc boinc    986077 Jun  3 20:04 agis_schedconf.cvmfs.json
[2025-06-03 20:08:02] -rw-------. 1 boinc boinc   1603667 Jun  3 20:04 agis_ddmendpoints.agis.ALL.json
[2025-06-03 20:08:02] drwx------. 4 boinc boinc      4096 Jun  3 20:04 pilot3
[2025-06-03 20:08:02] -rw-------. 1 boinc boinc       991 Jun  3 20:05 memory_monitor_summary.json
[2025-06-03 20:08:02] -rw-r--r--. 1 boinc boinc       522 Jun  3 20:05 boinc_task_state.xml
[2025-06-03 20:08:02] -rw-------. 1 boinc boinc     20367 Jun  3 20:05 log.45006595._049084.job.log.tgz.1
[2025-06-03 20:08:02] -rw-------. 1 boinc boinc        95 Jun  3 20:06 pilot_heartbeat.json
[2025-06-03 20:08:02] -rw-------. 1 boinc boinc      8355 Jun  3 20:07 heartbeat.json
[2025-06-03 20:08:02] -rw-r--r--. 1 boinc boinc      8192 Jun  3 20:08 boinc_mmap_file
[2025-06-03 20:08:02] -rw-r--r--. 1 boinc boinc        22 Jun  3 20:08 wrapper_checkpoint.txt
[2025-06-03 20:08:02] -rw-------. 1 boinc boinc      4352 Jun  3 20:08 pilotlog.txt
[2025-06-03 20:08:02] -rw-------. 1 boinc boinc     73531 Jun  3 20:08 log.45006595._049084.job.log.1
[2025-06-03 20:08:02] -rw-------. 1 boinc boinc       188 Jun  3 20:08 output.list
[2025-06-03 20:08:02] -rw-r--r--. 1 boinc boinc       620 Jun  3 20:08 runtime_log
[2025-06-03 20:08:02] -rw-------. 1 boinc boinc    112640 Jun  3 20:08 result.tar.gz
[2025-06-03 20:08:02] -rw-------. 1 boinc boinc       644 Jun  3 20:08 XtlMDmUNrg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmsNaKDmL1nQ9m.diag
[2025-06-03 20:08:02] -rw-r--r--. 1 boinc boinc      8484 Jun  3 20:08 runtime_log.err
[2025-06-03 20:08:02] -rw-r--r--. 1 boinc boinc     21438 Jun  3 20:08 stderr.txt
[2025-06-03 20:08:02] No HITS result produced
[2025-06-03 20:08:02]  *** Contents of shared directory: ***
[2025-06-03 20:08:02] total 209628
[2025-06-03 20:08:02] -rw-r--r--. 2 boinc boinc 214009192 Jun  3 20:04 ATLAS.root_0
[2025-06-03 20:08:02] -rw-r--r--. 2 boinc boinc    508882 Jun  3 20:04 input.tar.gz
[2025-06-03 20:08:02] -rw-r--r--. 2 boinc boinc     15093 Jun  3 20:04 start_atlas.sh
[2025-06-03 20:08:02] -rw-------. 1 boinc boinc    112640 Jun  3 20:08 result.tar.gz
20:08:04 (3301031): run_atlas exited; CPU time 28.825987
20:08:04 (3301031): called boinc_finish(0)

</stderr_txt>
]]>

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