Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
13:48:40 (628336): wrapper (7.7.26015): starting
13:48:40 (628336): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 13:48:40] Arguments: --nthreads 3
[2025-06-04 13:48:40] Threads: 3
[2025-06-04 13:48:40] Checking for CVMFS
[2025-06-04 13:48:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 13:48:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 13:48:40] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 13:48:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 13:48:40] 2.9.2.0 9871 1841 81484 146779 2 55 24423838 36864001 0 130560 0 1667423 99.993 385236 9535 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 13:48:40] CVMFS is ok
[2025-06-04 13:48:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 13:48:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 13:48:40] Further information can be found at the LHC@home message board.
[2025-06-04 13:48:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 13:48:40] Checking for apptainer binary...
[2025-06-04 13:48:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 13:48:40] Running /usr/bin/apptainer --version
[2025-06-04 13:48:40] apptainer version 1.3.6-6.1
[2025-06-04 13:48:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 13:48:40] atlasA091
[2025-06-04 13:48:40] apptainer works
[2025-06-04 13:48:40] Set ATHENA_PROC_NUMBER=3
[2025-06-04 13:48:40] Set ATHENA_CORE_NUMBER=3
[2025-06-04 13:48:40] Starting ATLAS job with PandaID=6666122507
[2025-06-04 13:48:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 15:34:39]  *** The last 200 lines of the pilot log: ***
[2025-06-04 15:34:39] 2025-06-04 13:34:23,665 | INFO     | executing command: lscpu
[2025-06-04 15:34:39] 2025-06-04 13:34:23,681 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 15:34:39] 2025-06-04 13:34:24,651 | INFO     | monitor loop #487: job 0:6666122507 is in state 'finished'
[2025-06-04 15:34:39] 2025-06-04 13:34:24,651 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 15:34:39] 2025-06-04 13:34:27,154 | INFO     | monitor loop #488: job 0:6666122507 is in state 'finished'
[2025-06-04 15:34:39] 2025-06-04 13:34:27,154 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 15:34:39] 2025-06-04 13:34:28,115 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 15:34:39] 2025-06-04 13:34:28,115 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6666122507/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 15:34:39] 2025-06-04 13:34:28,116 | INFO     | extracted standard info from prmon json
[2025-06-04 15:34:39] 2025-06-04 13:34:28,116 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 15:34:39] 2025-06-04 13:34:28,116 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 15:34:39] 2025-06-04 13:34:28,116 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 15:34:39] 2025-06-04 13:34:28,116 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 15:34:39] 2025-06-04 13:34:28,117 | INFO     | fitting pss+swap vs Time
[2025-06-04 15:34:39] 2025-06-04 13:34:28,117 | INFO     | sum of square deviations: 348769330.0
[2025-06-04 15:34:39] 2025-06-04 13:34:28,117 | INFO     | sum of deviations: 130679568.00000012
[2025-06-04 15:34:39] 2025-06-04 13:34:28,117 | INFO     | mean x: 1749040887.5
[2025-06-04 15:34:39] 2025-06-04 13:34:28,117 | INFO     | mean y: 2389578.2115384615
[2025-06-04 15:34:39] 2025-06-04 13:34:28,117 | INFO     | -- intersect: -652954478.5403463
[2025-06-04 15:34:39] 2025-06-04 13:34:28,117 | INFO     | intersect: -652954478.5403463
[2025-06-04 15:34:39] 2025-06-04 13:34:28,117 | INFO     | chi2: 1.5954927637513987
[2025-06-04 15:34:39] 2025-06-04 13:34:28,117 | INFO     | sum of square deviations: 300842850.0
[2025-06-04 15:34:39] 2025-06-04 13:34:28,117 | INFO     | sum of deviations: 741394305.0000012
[2025-06-04 15:34:39] 2025-06-04 13:34:28,117 | INFO     | mean x: 1749040735.0
[2025-06-04 15:34:39] 2025-06-04 13:34:28,117 | INFO     | mean y: 2391522.6666666665
[2025-06-04 15:34:39] 2025-06-04 13:34:28,118 | INFO     | -- intersect: -4307928101.489321
[2025-06-04 15:34:39] 2025-06-04 13:34:28,118 | INFO     | intersect: -4307928101.489321
[2025-06-04 15:34:39] 2025-06-04 13:34:28,118 | INFO     | chi2: 1.5990587048663902
[2025-06-04 15:34:39] 2025-06-04 13:34:28,118 | INFO     | current chi2=1.5990587048663902 (change=-0.223500926861437 %)
[2025-06-04 15:34:39] 2025-06-04 13:34:28,118 | INFO     | right removable region: 98
[2025-06-04 15:34:39] 2025-06-04 13:34:28,118 | INFO     | sum of square deviations: 300842850.0
[2025-06-04 15:34:39] 2025-06-04 13:34:28,118 | INFO     | sum of deviations: -12836258792.0
[2025-06-04 15:34:39] 2025-06-04 13:34:28,118 | INFO     | mean x: 1749041040.0
[2025-06-04 15:34:39] 2025-06-04 13:34:28,118 | INFO     | mean y: 2429647.8585858587
[2025-06-04 15:34:39] 2025-06-04 13:34:28,118 | INFO     | -- intersect: 74629908503.57619
[2025-06-04 15:34:39] 2025-06-04 13:34:28,118 | INFO     | intersect: 74629908503.57619
[2025-06-04 15:34:39] 2025-06-04 13:34:28,118 | INFO     | chi2: 0.12832630175878706
[2025-06-04 15:34:39] 2025-06-04 13:34:28,118 | INFO     | current chi2=0.12832630175878706 (change=91.95694868229549 %)
[2025-06-04 15:34:39] 2025-06-04 13:34:28,118 | INFO     | sum of square deviations: 257521107.5
[2025-06-04 15:34:39] 2025-06-04 13:34:28,118 | INFO     | sum of deviations: -8496609510.5
[2025-06-04 15:34:39] 2025-06-04 13:34:28,118 | INFO     | mean x: 1749041192.5
[2025-06-04 15:34:39] 2025-06-04 13:34:28,118 | INFO     | mean y: 2414347.861702128
[2025-06-04 15:34:39] 2025-06-04 13:34:28,118 | INFO     | -- intersect: 57709994804.93845
[2025-06-04 15:34:39] 2025-06-04 13:34:28,118 | INFO     | intersect: 57709994804.93845
[2025-06-04 15:34:39] 2025-06-04 13:34:28,118 | INFO     | chi2: 0.10264067818569163
[2025-06-04 15:34:39] 2025-06-04 13:34:28,119 | INFO     | current chi2=0.10264067818569163 (change=20.01586831464706 %)
[2025-06-04 15:34:39] 2025-06-04 13:34:28,119 | INFO     | left removable region: 20
[2025-06-04 15:34:39] 2025-06-04 13:34:28,119 | INFO     | sum of square deviations: 147126479.5
[2025-06-04 15:34:39] 2025-06-04 13:34:28,119 | INFO     | sum of deviations: -1273683934.4999993
[2025-06-04 15:34:39] 2025-06-04 13:34:28,119 | INFO     | mean x: 1749041314.5
[2025-06-04 15:34:39] 2025-06-04 13:34:28,119 | INFO     | mean y: 2389943.141025641
[2025-06-04 15:34:39] 2025-06-04 13:34:28,119 | INFO     | -- intersect: 15143959500.34239
[2025-06-04 15:34:39] 2025-06-04 13:34:28,119 | INFO     | intersect: 15143959500.34239
[2025-06-04 15:34:39] 2025-06-04 13:34:28,119 | INFO     | chi2: 0.04259406756288538
[2025-06-04 15:34:39] 2025-06-04 13:34:28,119 | INFO     | -- intersect: 15143959500.34239
[2025-06-04 15:34:39] 2025-06-04 13:34:28,119 | INFO     | current memory leak: -8.66 B/s (using 78 data points, chi2=0.04)
[2025-06-04 15:34:39] 2025-06-04 13:34:28,119 | INFO     | ..............................
[2025-06-04 15:34:39] 2025-06-04 13:34:28,119 | INFO     | . Timing measurements:
[2025-06-04 15:34:39] 2025-06-04 13:34:28,119 | INFO     | . get job = 0 s
[2025-06-04 15:34:39] 2025-06-04 13:34:28,119 | INFO     | . initial setup = 1 s
[2025-06-04 15:34:39] 2025-06-04 13:34:28,119 | INFO     | . payload setup = 3 s
[2025-06-04 15:34:39] 2025-06-04 13:34:28,119 | INFO     | . stage-in = 0 s
[2025-06-04 15:34:39] 2025-06-04 13:34:28,119 | INFO     | . payload execution = 6314 s
[2025-06-04 15:34:39] 2025-06-04 13:34:28,119 | INFO     | . stage-out = 0 s
[2025-06-04 15:34:39] 2025-06-04 13:34:28,119 | INFO     | . log creation = 0 s
[2025-06-04 15:34:39] 2025-06-04 13:34:28,119 | INFO     | ..............................
[2025-06-04 15:34:39] 2025-06-04 13:34:28,150 | INFO     | 
[2025-06-04 15:34:39] 2025-06-04 13:34:28,150 | INFO     | job summary report
[2025-06-04 15:34:39] 2025-06-04 13:34:28,150 | INFO     | --------------------------------------------------
[2025-06-04 15:34:39] 2025-06-04 13:34:28,151 | INFO     | PanDA job id: 6666122507
[2025-06-04 15:34:39] 2025-06-04 13:34:28,151 | INFO     | task id: 44871837
[2025-06-04 15:34:39] 2025-06-04 13:34:28,151 | INFO     | errors: (none)
[2025-06-04 15:34:39] 2025-06-04 13:34:28,151 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 15:34:39] 2025-06-04 13:34:28,151 | INFO     | pilot state: finished 
[2025-06-04 15:34:39] 2025-06-04 13:34:28,151 | INFO     | transexitcode: 0
[2025-06-04 15:34:39] 2025-06-04 13:34:28,151 | INFO     | exeerrorcode: 0
[2025-06-04 15:34:39] 2025-06-04 13:34:28,151 | INFO     | exeerrordiag: 
[2025-06-04 15:34:39] 2025-06-04 13:34:28,151 | INFO     | exitcode: 0
[2025-06-04 15:34:39] 2025-06-04 13:34:28,151 | INFO     | exitmsg: OK
[2025-06-04 15:34:39] 2025-06-04 13:34:28,151 | INFO     | cpuconsumptiontime: 18279 s
[2025-06-04 15:34:39] 2025-06-04 13:34:28,151 | INFO     | nevents: 400
[2025-06-04 15:34:39] 2025-06-04 13:34:28,151 | INFO     | neventsw: 0
[2025-06-04 15:34:39] 2025-06-04 13:34:28,151 | INFO     | pid: 638453
[2025-06-04 15:34:39] 2025-06-04 13:34:28,151 | INFO     | pgrp: 638453
[2025-06-04 15:34:39] 2025-06-04 13:34:28,151 | INFO     | corecount: 3
[2025-06-04 15:34:39] 2025-06-04 13:34:28,151 | INFO     | event service: False
[2025-06-04 15:34:39] 2025-06-04 13:34:28,151 | INFO     | sizes: {0: 2397344, 3: 2397550, 11: 2397578, 6322: 2424587, 6323: 2433534, 6325: 2433590, 6329: 2433888}
[2025-06-04 15:34:39] 2025-06-04 13:34:28,151 | INFO     | --------------------------------------------------
[2025-06-04 15:34:39] 2025-06-04 13:34:28,151 | INFO     | 
[2025-06-04 15:34:39] 2025-06-04 13:34:28,151 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 15:34:39] 2025-06-04 13:34:28,163 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 15:34:39] 2025-06-04 13:34:28,163 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 15:34:39] 2025-06-04 13:34:28,163 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 15:34:39] 2025-06-04 13:34:28,163 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 15:34:39] 2025-06-04 13:34:28,163 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 15:34:39] 2025-06-04 13:34:28,163 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 15:34:39] 2025-06-04 13:34:28,163 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 15:34:39] 2025-06-04 13:34:28,163 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 15:34:39] 2025-06-04 13:34:28,163 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 15:34:39] 2025-06-04 13:34:28,163 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 15:34:39] 2025-06-04 13:34:28,163 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 15:34:39] 2025-06-04 13:34:28,163 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 15:34:39] 2025-06-04 13:34:28,163 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 15:34:39] 2025-06-04 13:34:28,163 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 15:34:39] 2025-06-04 13:34:28,163 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 15:34:39] 2025-06-04 13:34:28,163 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 15:34:39] 2025-06-04 13:34:28,163 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 15:34:39] 2025-06-04 13:34:28,164 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 15:34:39] 2025-06-04 13:34:28,164 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 15:34:39] 2025-06-04 13:34:28,164 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 15:34:39] 2025-06-04 13:34:28,164 | INFO     | job 6666122507 has completed (purged errors)
[2025-06-04 15:34:39] 2025-06-04 13:34:28,164 | INFO     | overall cleanup function is called
[2025-06-04 15:34:39] 2025-06-04 13:34:29,170 | INFO     | --- collectZombieJob: --- 10, [638453]
[2025-06-04 15:34:39] 2025-06-04 13:34:29,170 | INFO     | zombie collector waiting for pid 638453
[2025-06-04 15:34:39] 2025-06-04 13:34:29,170 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 15:34:39] 2025-06-04 13:34:29,170 | INFO     | collected zombie processes
[2025-06-04 15:34:39] 2025-06-04 13:34:29,170 | INFO     | will attempt to kill all subprocesses of pid=638453
[2025-06-04 15:34:39] 2025-06-04 13:34:29,213 | INFO     | process IDs to be killed: [638453] (in reverse order)
[2025-06-04 15:34:39] 2025-06-04 13:34:29,238 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 15:34:39] 2025-06-04 13:34:29,238 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 15:34:39] 2025-06-04 13:34:29,240 | INFO     | did not find any defunct processes belonging to 638453
[2025-06-04 15:34:39] 2025-06-04 13:34:29,241 | INFO     | did not find any defunct processes belonging to 638453
[2025-06-04 15:34:39] 2025-06-04 13:34:29,241 | INFO     | ready for new job
[2025-06-04 15:34:39] 2025-06-04 13:34:29,241 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 15:34:39] 2025-06-04 13:34:29,241 | INFO     | **************************************
[2025-06-04 15:34:39] 2025-06-04 13:34:29,241 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 15:34:39] 2025-06-04 13:34:29,241 | INFO     | **************************************
[2025-06-04 15:34:39] 2025-06-04 13:34:29,241 | INFO     | 
[2025-06-04 15:34:39] 2025-06-04 13:34:29,242 | INFO     | architecture information:
[2025-06-04 15:34:39] 2025-06-04 13:34:29,242 | INFO     | executing command: cat /etc/os-release
[2025-06-04 15:34:39] 2025-06-04 13:34:29,251 | INFO     | cat /etc/os-release:
[2025-06-04 15:34:39] NAME="CentOS Linux"
[2025-06-04 15:34:39] VERSION="7 (Core)"
[2025-06-04 15:34:39] ID="centos"
[2025-06-04 15:34:39] ID_LIKE="rhel fedora"
[2025-06-04 15:34:39] VERSION_ID="7"
[2025-06-04 15:34:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 15:34:39] ANSI_COLOR="0;31"
[2025-06-04 15:34:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 15:34:39] HOME_URL="https://www.centos.org/"
[2025-06-04 15:34:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 15:34:39] 
[2025-06-04 15:34:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 15:34:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 15:34:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 15:34:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 15:34:39] 
[2025-06-04 15:34:39] 2025-06-04 13:34:29,251 | INFO     | **************************************
[2025-06-04 15:34:39] 2025-06-04 13:34:29,334 | INFO     | PID=631970 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 15:34:39] 2025-06-04 13:34:29,755 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 15:34:39] 2025-06-04 13:34:29,767 | INFO     | sufficient remaining disk space (376013062144 B)
[2025-06-04 15:34:39] 2025-06-04 13:34:29,767 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 15:34:39] 2025-06-04 13:34:29,767 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 15:34:39] 2025-06-04 13:34:29,767 | INFO     | update_server=False
[2025-06-04 15:34:39] 2025-06-04 13:34:29,767 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 15:34:39] 2025-06-04 13:34:29,767 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 15:34:39] 2025-06-04 13:34:29,767 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 15:34:39] 2025-06-04 13:34:29,768 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 15:34:39] 2025-06-04 13:34:29,768 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 15:34:39] 2025-06-04 13:34:29,768 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 15:34:39] 2025-06-04 13:34:29,768 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 15:34:39] 2025-06-04 13:34:29,768 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:34:39] 2025-06-04 13:34:29,994 | INFO     | all payload control threads have been joined
[2025-06-04 15:34:39] 2025-06-04 13:34:30,663 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:34:39] 2025-06-04 13:34:30,664 | INFO     | aborting loop
[2025-06-04 15:34:39] 2025-06-04 13:34:30,768 | INFO     | [job] retrieve thread has finished
[2025-06-04 15:34:39] 2025-06-04 13:34:30,773 | INFO     | [job] queue monitor thread has finished
[2025-06-04 15:34:39] 2025-06-04 13:34:30,854 | INFO     | all data control threads have been joined
[2025-06-04 15:34:39] 2025-06-04 13:34:30,873 | INFO     | all job control threads have been joined
[2025-06-04 15:34:39] 2025-06-04 13:34:30,915 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 15:34:39] 2025-06-04 13:34:31,000 | INFO     | [payload] control thread has finished
[2025-06-04 15:34:39] 2025-06-04 13:34:31,223 | INFO     | [payload] failed_post thread has finished
[2025-06-04 15:34:39] 2025-06-04 13:34:31,436 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 15:34:39] 2025-06-04 13:34:31,669 | INFO     | [job] job monitor thread has finished
[2025-06-04 15:34:39] 2025-06-04 13:34:31,773 | INFO     | [data] copytool_out thread has finished
[2025-06-04 15:34:39] 2025-06-04 13:34:31,859 | INFO     | [data] control thread has finished
[2025-06-04 15:34:39] 2025-06-04 13:34:31,879 | INFO     | [job] control thread has finished
[2025-06-04 15:34:39] 2025-06-04 13:34:31,888 | INFO     | [data] copytool_in thread has finished
[2025-06-04 15:34:39] 2025-06-04 13:34:31,939 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 15:34:39] 2025-06-04 13:34:31,949 | INFO     | [payload] validate_post thread has finished
[2025-06-04 15:34:39] 2025-06-04 13:34:32,053 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 15:34:39] 2025-06-04 13:34:32,161 | INFO     | [job] validate thread has finished
[2025-06-04 15:34:39] 2025-06-04 13:34:33,774 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 15:34:39] 2025-06-04 13:34:34,698 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139836857780032)>', '<ExcThread(monitor, started 139836115629824)>']
[2025-06-04 15:34:39] 2025-06-04 13:34:34,791 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 15:34:39] 2025-06-04 13:34:34,791 | INFO     | [monitor] control thread has ended
[2025-06-04 15:34:39] 2025-06-04 13:34:39,706 | INFO     | all workflow threads have been joined
[2025-06-04 15:34:39] 2025-06-04 13:34:39,706 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 15:34:39] 2025-06-04 13:34:39,707 | INFO     | traces error code: 0
[2025-06-04 15:34:39] 2025-06-04 13:34:39,707 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 15:34:39] 2025-06-04 13:34:39,757 [wrapper] ==== pilot stdout END ====
[2025-06-04 15:34:39] 2025-06-04 13:34:39,760 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 15:34:39] 2025-06-04 13:34:39,762 [wrapper] pilotpid: 631970
[2025-06-04 15:34:39] 2025-06-04 13:34:39,765 [wrapper] Pilot exit status: 0
[2025-06-04 15:34:39] 2025-06-04 13:34:39,773 [wrapper] pandaids: 6666122507
[2025-06-04 15:34:39] 2025-06-04 13:34:39,790 [wrapper] cleanup supervisor_pilot  653007 631971
[2025-06-04 15:34:39] 2025-06-04 13:34:39,793 [wrapper] Test setup, not cleaning
[2025-06-04 15:34:39] 2025-06-04 13:34:39,795 [wrapper] apfmon messages muted
[2025-06-04 15:34:39] 2025-06-04 13:34:39,798 [wrapper] ==== wrapper stdout END ====
[2025-06-04 15:34:39] 2025-06-04 13:34:39,800 [wrapper] ==== wrapper stderr END ====
[2025-06-04 15:34:39]  *** Error codes and diagnostics ***
[2025-06-04 15:34:39]     "exeErrorCode": 0,
[2025-06-04 15:34:39]     "exeErrorDiag": "",
[2025-06-04 15:34:39]     "pilotErrorCode": 0,
[2025-06-04 15:34:39]     "pilotErrorDiag": "",
[2025-06-04 15:34:39]  *** Listing of results directory ***
[2025-06-04 15:34:39] total 419712
[2025-06-04 15:34:39] -rw-r--r-- 1 boinc boinc    495897 May 26 20:09 pilot3.tar.gz
[2025-06-04 15:34:39] -rwx------ 1 boinc boinc     37140 May 26 20:49 runpilot2-wrapper.sh
[2025-06-04 15:34:39] -rw-r--r-- 1 boinc boinc      5111 May 26 20:49 queuedata.json
[2025-06-04 15:34:39] -rw-r--r-- 1 boinc boinc       100 Jun  4 13:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 15:34:39] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 13:48 run_atlas
[2025-06-04 15:34:39] -rw-r--r-- 1 boinc boinc       105 Jun  4 13:48 job.xml
[2025-06-04 15:34:39] -rw-r--r-- 2 boinc boinc 223523290 Jun  4 13:48 EVNT.44871834._002201.pool.root.1
[2025-06-04 15:34:39] -rw-r--r-- 1 boinc boinc      6927 Jun  4 13:48 init_data.xml
[2025-06-04 15:34:39] drwxrwx--x 2 boinc boinc      4096 Jun  4 13:48 shared
[2025-06-04 15:34:39] -rw-r--r-- 2 boinc boinc    508879 Jun  4 13:48 input.tar.gz
[2025-06-04 15:34:39] -rw-r--r-- 2 boinc boinc     15093 Jun  4 13:48 start_atlas.sh
[2025-06-04 15:34:39] -rw-r--r-- 1 boinc boinc         0 Jun  4 13:48 boinc_lockfile
[2025-06-04 15:34:39] -rw-r--r-- 1 boinc boinc      2558 Jun  4 13:48 pandaJob.out
[2025-06-04 15:34:39] -rw------- 1 boinc boinc    986812 Jun  4 13:48 agis_schedconf.cvmfs.json
[2025-06-04 15:34:39] -rw------- 1 boinc boinc   1598969 Jun  4 13:48 agis_ddmendpoints.agis.ALL.json
[2025-06-04 15:34:39] drwx------ 4 boinc boinc      4096 Jun  4 13:48 pilot3
[2025-06-04 15:34:39] -rw------- 1 boinc boinc 200727494 Jun  4 15:34 HITS.44871837._055434.pool.root.1
[2025-06-04 15:34:39] -rw-r--r-- 1 boinc boinc       529 Jun  4 15:34 boinc_task_state.xml
[2025-06-04 15:34:39] -rw------- 1 boinc boinc        95 Jun  4 15:34 pilot_heartbeat.json
[2025-06-04 15:34:39] -rw------- 1 boinc boinc      1017 Jun  4 15:34 memory_monitor_summary.json
[2025-06-04 15:34:39] -rw------- 1 boinc boinc    243698 Jun  4 15:34 log.44871837._055434.job.log.tgz.1
[2025-06-04 15:34:39] -rw------- 1 boinc boinc      7655 Jun  4 15:34 heartbeat.json
[2025-06-04 15:34:39] -rw-r--r-- 1 boinc boinc      8192 Jun  4 15:34 boinc_mmap_file
[2025-06-04 15:34:39] -rw-r--r-- 1 boinc boinc        27 Jun  4 15:34 wrapper_checkpoint.txt
[2025-06-04 15:34:39] -rw------- 1 boinc boinc      4798 Jun  4 15:34 pilotlog.txt
[2025-06-04 15:34:39] -rw------- 1 boinc boinc    603432 Jun  4 15:34 log.44871837._055434.job.log.1
[2025-06-04 15:34:39] -rw------- 1 boinc boinc       357 Jun  4 15:34 output.list
[2025-06-04 15:34:39] -rw-r--r-- 1 boinc boinc       620 Jun  4 15:34 runtime_log
[2025-06-04 15:34:39] -rw------- 1 boinc boinc    870400 Jun  4 15:34 result.tar.gz
[2025-06-04 15:34:39] -rw-r--r-- 1 boinc boinc      8748 Jun  4 15:34 runtime_log.err
[2025-06-04 15:34:39] -rw------- 1 boinc boinc       662 Jun  4 15:34 QiJNDm53rd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmzZQKDmf4EQwn.diag
[2025-06-04 15:34:39] -rw-r--r-- 1 boinc boinc     21211 Jun  4 15:34 stderr.txt
[2025-06-04 15:34:39] HITS file was successfully produced:
[2025-06-04 15:34:39] -rw------- 1 boinc boinc 200727494 Jun  4 15:34 shared/HITS.pool.root.1
[2025-06-04 15:34:39]  *** Contents of shared directory: ***
[2025-06-04 15:34:39] total 415688
[2025-06-04 15:34:39] -rw-r--r-- 2 boinc boinc 223523290 Jun  4 13:48 ATLAS.root_0
[2025-06-04 15:34:39] -rw-r--r-- 2 boinc boinc    508879 Jun  4 13:48 input.tar.gz
[2025-06-04 15:34:39] -rw-r--r-- 2 boinc boinc     15093 Jun  4 13:48 start_atlas.sh
[2025-06-04 15:34:39] -rw------- 1 boinc boinc 200727494 Jun  4 15:34 HITS.pool.root.1
[2025-06-04 15:34:39] -rw------- 1 boinc boinc    870400 Jun  4 15:34 result.tar.gz
15:34:40 (628336): run_atlas exited; CPU time 18300.179477
15:34:40 (628336): called boinc_finish(0)

</stderr_txt>
]]>

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