Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:38:45 (3006): wrapper (7.7.26015): starting
18:38:45 (3006): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 18:38:45] Arguments: --nthreads 8
[2025-06-04 18:38:45] Threads: 8
[2025-06-04 18:38:45] Checking for CVMFS
[2025-06-04 18:38:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 18:38:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 18:38:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 18:38:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 18:38:47] 2.11.2.0 13500 33571 87420 146788 0 158 19052418 25165825 3554 130560 0 16850082 99.837 19293906 2592 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 18:38:47] CVMFS is ok
[2025-06-04 18:38:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 18:38:47] Checking for apptainer binary...
[2025-06-04 18:38:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 18:38:47] Running /usr/bin/apptainer --version
[2025-06-04 18:38:47] apptainer version 1.3.2-1.el7
[2025-06-04 18:38:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 18:38:50] cg-vwn363.simple-grid.lan
[2025-06-04 18:38:50] apptainer works
[2025-06-04 18:38:50] Set ATHENA_PROC_NUMBER=8
[2025-06-04 18:38:50] Set ATHENA_CORE_NUMBER=8
[2025-06-04 18:38:50] Starting ATLAS job with PandaID=6678215850
[2025-06-04 18:38:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 00:50:07]  *** The last 200 lines of the pilot log: ***
[2025-06-05 00:50:07] 2025-06-04 20:19:58,097 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6678215850/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 00:50:07] 2025-06-04 20:19:58,099 | INFO     | extracted standard info from prmon json
[2025-06-05 00:50:07] 2025-06-04 20:19:58,099 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 00:50:07] 2025-06-04 20:19:58,099 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 00:50:07] 2025-06-04 20:19:58,099 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 00:50:07] 2025-06-04 20:19:58,099 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 00:50:07] 2025-06-04 20:19:58,104 | INFO     | fitting pss+swap vs Time
[2025-06-05 00:50:07] 2025-06-04 20:19:58,105 | INFO     | sum of square deviations: 3081657780.0
[2025-06-05 00:50:07] 2025-06-04 20:19:58,106 | INFO     | sum of deviations: -10208807194.99999
[2025-06-05 00:50:07] 2025-06-04 20:19:58,107 | INFO     | mean x: 1749061740.0
[2025-06-05 00:50:07] 2025-06-04 20:19:58,107 | INFO     | mean y: 2484698.846511628
[2025-06-05 00:50:07] 2025-06-04 20:19:58,107 | INFO     | -- intersect: 5796714736.878575
[2025-06-05 00:50:07] 2025-06-04 20:19:58,107 | INFO     | intersect: 5796714736.878575
[2025-06-05 00:50:07] 2025-06-04 20:19:58,107 | INFO     | chi2: 2.653394196543593
[2025-06-05 00:50:07] 2025-06-04 20:19:58,108 | INFO     | sum of square deviations: 2871616632.5
[2025-06-05 00:50:07] 2025-06-04 20:19:58,109 | INFO     | sum of deviations: 4107453147.499997
[2025-06-05 00:50:07] 2025-06-04 20:19:58,110 | INFO     | mean x: 1749061587.5
[2025-06-05 00:50:07] 2025-06-04 20:19:58,110 | INFO     | mean y: 2494899.2333333334
[2025-06-05 00:50:07] 2025-06-04 20:19:58,110 | INFO     | -- intersect: -2499297450.5671124
[2025-06-05 00:50:07] 2025-06-04 20:19:58,110 | INFO     | intersect: -2499297450.5671124
[2025-06-05 00:50:07] 2025-06-04 20:19:58,110 | INFO     | chi2: 1.891375668633598
[2025-06-05 00:50:07] 2025-06-04 20:19:58,110 | INFO     | current chi2=1.891375668633598 (change=28.718632493529523 %)
[2025-06-05 00:50:07] 2025-06-04 20:19:58,111 | INFO     | sum of square deviations: 2671343110.0
[2025-06-05 00:50:07] 2025-06-04 20:19:58,112 | INFO     | sum of deviations: 3956506604.0000043
[2025-06-05 00:50:07] 2025-06-04 20:19:58,113 | INFO     | mean x: 1749061435.0
[2025-06-05 00:50:07] 2025-06-04 20:19:58,113 | INFO     | mean y: 2494784.2731707315
[2025-06-05 00:50:07] 2025-06-04 20:19:58,113 | INFO     | -- intersect: -2588027224.1030664
[2025-06-05 00:50:07] 2025-06-04 20:19:58,113 | INFO     | intersect: -2588027224.1030664
[2025-06-05 00:50:07] 2025-06-04 20:19:58,113 | INFO     | chi2: 1.8916625174184623
[2025-06-05 00:50:07] 2025-06-04 20:19:58,114 | INFO     | current chi2=1.8916625174184623 (change=-0.01516614544753081 %)
[2025-06-05 00:50:07] 2025-06-04 20:19:58,114 | INFO     | right removable region: 204
[2025-06-05 00:50:07] 2025-06-04 20:19:58,114 | INFO     | sum of square deviations: 2871616632.5
[2025-06-05 00:50:07] 2025-06-04 20:19:58,116 | INFO     | sum of deviations: -48517671321.00001
[2025-06-05 00:50:07] 2025-06-04 20:19:58,116 | INFO     | mean x: 1749061892.5
[2025-06-05 00:50:07] 2025-06-04 20:19:58,116 | INFO     | mean y: 2512284.219047619
[2025-06-05 00:50:07] 2025-06-04 20:19:58,116 | INFO     | -- intersect: 29553953468.94385
[2025-06-05 00:50:07] 2025-06-04 20:19:58,116 | INFO     | intersect: 29553953468.94385
[2025-06-05 00:50:07] 2025-06-04 20:19:58,117 | INFO     | chi2: 0.9828823925767168
[2025-06-05 00:50:07] 2025-06-04 20:19:58,117 | INFO     | current chi2=0.9828823925767168 (change=62.95754344163957 %)
[2025-06-05 00:50:07] 2025-06-04 20:19:58,117 | INFO     | sum of square deviations: 2671343110.0
[2025-06-05 00:50:07] 2025-06-04 20:19:58,119 | INFO     | sum of deviations: -46188980827.0
[2025-06-05 00:50:07] 2025-06-04 20:19:58,119 | INFO     | mean x: 1749062045.0
[2025-06-05 00:50:07] 2025-06-04 20:19:58,119 | INFO     | mean y: 2510469.351219512
[2025-06-05 00:50:07] 2025-06-04 20:19:58,120 | INFO     | -- intersect: 30244748150.956413
[2025-06-05 00:50:07] 2025-06-04 20:19:58,120 | INFO     | intersect: 30244748150.956413
[2025-06-05 00:50:07] 2025-06-04 20:19:58,120 | INFO     | chi2: 0.9683063396979518
[2025-06-05 00:50:07] 2025-06-04 20:19:58,120 | INFO     | current chi2=0.9683063396979518 (change=1.4829905377135304 %)
[2025-06-05 00:50:07] 2025-06-04 20:19:58,120 | INFO     | left removable region: 20
[2025-06-05 00:50:07] 2025-06-04 20:19:58,121 | INFO     | sum of square deviations: 1931608310.0
[2025-06-05 00:50:07] 2025-06-04 20:19:58,122 | INFO     | sum of deviations: -17951183151.00001
[2025-06-05 00:50:07] 2025-06-04 20:19:58,122 | INFO     | mean x: 1749062014.5
[2025-06-05 00:50:07] 2025-06-04 20:19:58,123 | INFO     | mean y: 2510594.4565217393
[2025-06-05 00:50:07] 2025-06-04 20:19:58,123 | INFO     | -- intersect: 16257220414.350876
[2025-06-05 00:50:07] 2025-06-04 20:19:58,123 | INFO     | intersect: 16257220414.350876
[2025-06-05 00:50:07] 2025-06-04 20:19:58,123 | INFO     | chi2: 0.13999848016164215
[2025-06-05 00:50:07] 2025-06-04 20:19:58,123 | INFO     | -- intersect: 16257220414.350876
[2025-06-05 00:50:07] 2025-06-04 20:19:58,124 | INFO     | current memory leak: -9.29 B/s (using 184 data points, chi2=0.14)
[2025-06-05 00:50:07] 2025-06-04 20:19:58,124 | INFO     | ..............................
[2025-06-05 00:50:07] 2025-06-04 20:19:58,125 | INFO     | . Timing measurements:
[2025-06-05 00:50:07] 2025-06-04 20:19:58,125 | INFO     | . get job = 0 s
[2025-06-05 00:50:07] 2025-06-04 20:19:58,125 | INFO     | . initial setup = 2 s
[2025-06-05 00:50:07] 2025-06-04 20:19:58,125 | INFO     | . payload setup = 12 s
[2025-06-05 00:50:07] 2025-06-04 20:19:58,125 | INFO     | . stage-in = 0 s
[2025-06-05 00:50:07] 2025-06-04 20:19:58,125 | INFO     | . payload execution = 13109 s
[2025-06-05 00:50:07] 2025-06-04 20:19:58,125 | INFO     | . stage-out = 3 s
[2025-06-05 00:50:07] 2025-06-04 20:19:58,125 | INFO     | . log creation = 1 s
[2025-06-05 00:50:07] 2025-06-04 20:19:58,125 | INFO     | ..............................
[2025-06-05 00:50:07] 2025-06-04 20:19:58,411 | INFO     | 
[2025-06-05 00:50:07] 2025-06-04 20:19:58,411 | INFO     | job summary report
[2025-06-05 00:50:07] 2025-06-04 20:19:58,411 | INFO     | --------------------------------------------------
[2025-06-05 00:50:07] 2025-06-04 20:19:58,411 | INFO     | PanDA job id: 6678215850
[2025-06-05 00:50:07] 2025-06-04 20:19:58,412 | INFO     | task id: 45006595
[2025-06-05 00:50:07] 2025-06-04 20:19:58,412 | INFO     | errors: (none)
[2025-06-05 00:50:07] 2025-06-04 20:19:58,412 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 00:50:07] 2025-06-04 20:19:58,412 | INFO     | pilot state: finished 
[2025-06-05 00:50:07] 2025-06-04 20:19:58,412 | INFO     | transexitcode: 0
[2025-06-05 00:50:07] 2025-06-04 20:19:58,412 | INFO     | exeerrorcode: 0
[2025-06-05 00:50:07] 2025-06-04 20:19:58,412 | INFO     | exeerrordiag: 
[2025-06-05 00:50:07] 2025-06-04 20:19:58,412 | INFO     | exitcode: 0
[2025-06-05 00:50:07] 2025-06-04 20:19:58,412 | INFO     | exitmsg: OK
[2025-06-05 00:50:07] 2025-06-04 20:19:58,412 | INFO     | cpuconsumptiontime: 49416 s
[2025-06-05 00:50:07] 2025-06-04 20:19:58,412 | INFO     | nevents: 400
[2025-06-05 00:50:07] 2025-06-04 20:19:58,413 | INFO     | neventsw: 0
[2025-06-05 00:50:07] 2025-06-04 20:19:58,413 | INFO     | pid: 15275
[2025-06-05 00:50:07] 2025-06-04 20:19:58,413 | INFO     | pgrp: 15275
[2025-06-05 00:50:07] 2025-06-04 20:19:58,413 | INFO     | corecount: 8
[2025-06-05 00:50:07] 2025-06-04 20:19:58,413 | INFO     | event service: False
[2025-06-05 00:50:07] 2025-06-04 20:19:58,413 | INFO     | sizes: {0: 2397171, 1: 2397370, 9: 2397576, 12: 2397604, 13126: 2427083, 13131: 2436024, 13134: 2436208, 13221: 2436378}
[2025-06-05 00:50:07] 2025-06-04 20:19:58,413 | INFO     | --------------------------------------------------
[2025-06-05 00:50:07] 2025-06-04 20:19:58,413 | INFO     | 
[2025-06-05 00:50:07] 2025-06-04 20:19:58,413 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-06-05 00:50:07] 2025-06-04 20:19:58,499 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 00:50:07] 2025-06-04 20:19:58,500 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 00:50:07] 2025-06-04 20:19:58,500 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 00:50:07] 2025-06-04 20:19:58,500 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 00:50:07] 2025-06-04 20:19:58,500 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 00:50:07] 2025-06-04 20:19:58,500 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 00:50:07] 2025-06-04 20:19:58,500 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 00:50:07] 2025-06-04 20:19:58,500 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 00:50:07] 2025-06-04 20:19:58,501 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 00:50:07] 2025-06-04 20:19:58,501 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 00:50:07] 2025-06-04 20:19:58,501 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 00:50:07] 2025-06-04 20:19:58,501 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 00:50:07] 2025-06-04 20:19:58,501 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 00:50:07] 2025-06-04 20:19:58,501 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 00:50:07] 2025-06-04 20:19:58,501 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 00:50:07] 2025-06-04 20:19:58,501 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 00:50:07] 2025-06-04 20:19:58,501 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 00:50:07] 2025-06-04 20:19:58,501 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 00:50:07] 2025-06-04 20:19:58,502 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 00:50:07] 2025-06-04 20:19:58,502 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 00:50:07] 2025-06-04 20:19:58,502 | INFO     | job 6678215850 has completed (purged errors)
[2025-06-05 00:50:07] 2025-06-04 20:19:58,502 | INFO     | overall cleanup function is called
[2025-06-05 00:50:07] 2025-06-04 20:19:59,511 | INFO     | --- collectZombieJob: --- 10, [15275]
[2025-06-05 00:50:07] 2025-06-04 20:19:59,511 | INFO     | zombie collector waiting for pid 15275
[2025-06-05 00:50:07] 2025-06-04 20:19:59,511 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 00:50:07] 2025-06-04 20:19:59,511 | INFO     | collected zombie processes
[2025-06-05 00:50:07] 2025-06-04 20:19:59,512 | INFO     | will attempt to kill all subprocesses of pid=15275
[2025-06-05 00:50:07] 2025-06-04 20:19:59,651 | INFO     | process IDs to be killed: [15275] (in reverse order)
[2025-06-05 00:50:07] 2025-06-04 20:20:00,111 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 00:50:07] 2025-06-04 20:20:00,112 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 00:50:07] 2025-06-04 20:20:00,115 | INFO     | did not find any defunct processes belonging to 15275
[2025-06-05 00:50:07] 2025-06-04 20:20:00,119 | INFO     | did not find any defunct processes belonging to 15275
[2025-06-05 00:50:07] 2025-06-04 20:20:00,119 | INFO     | ready for new job
[2025-06-05 00:50:07] 2025-06-04 20:20:00,119 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 00:50:07] 2025-06-04 20:20:00,121 | INFO     | **************************************
[2025-06-05 00:50:07] 2025-06-04 20:20:00,121 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 00:50:07] 2025-06-04 20:20:00,121 | INFO     | **************************************
[2025-06-05 00:50:07] 2025-06-04 20:20:00,122 | INFO     | 
[2025-06-05 00:50:07] 2025-06-04 20:20:00,122 | INFO     | pilot is running in a VM
[2025-06-05 00:50:07] 2025-06-04 20:20:00,122 | INFO     | architecture information:
[2025-06-05 00:50:07] 2025-06-04 20:20:00,135 | INFO     | executing command: cat /etc/os-release
[2025-06-05 00:50:07] 2025-06-04 20:20:00,378 | INFO     | cat /etc/os-release:
[2025-06-05 00:50:07] NAME="CentOS Linux"
[2025-06-05 00:50:07] VERSION="7 (Core)"
[2025-06-05 00:50:07] ID="centos"
[2025-06-05 00:50:07] ID_LIKE="rhel fedora"
[2025-06-05 00:50:07] VERSION_ID="7"
[2025-06-05 00:50:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 00:50:07] ANSI_COLOR="0;31"
[2025-06-05 00:50:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 00:50:07] HOME_URL="https://www.centos.org/"
[2025-06-05 00:50:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 00:50:07] 
[2025-06-05 00:50:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 00:50:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 00:50:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 00:50:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 00:50:07] 
[2025-06-05 00:50:07] 2025-06-04 20:20:00,379 | INFO     | **************************************
[2025-06-05 00:50:07] 2025-06-04 20:20:00,882 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-06-05 00:50:07] 2025-06-04 20:20:01,180 | INFO     | sufficient remaining disk space (497059627008 B)
[2025-06-05 00:50:07] 2025-06-04 20:20:01,180 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 00:50:07] 2025-06-04 20:20:01,180 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 00:50:07] 2025-06-04 20:20:01,180 | INFO     | update_server=False
[2025-06-05 00:50:07] 2025-06-04 20:20:01,180 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 00:50:07] 2025-06-04 20:20:01,185 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:50:07] 2025-06-04 20:20:01,185 | INFO     | aborting loop
[2025-06-05 00:50:07] 2025-06-04 20:20:01,814 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 00:50:07] 2025-06-04 20:20:01,814 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 00:50:07] 2025-06-04 20:20:01,815 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 00:50:07] 2025-06-04 20:20:02,031 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 00:50:07] 2025-06-04 20:20:02,186 | INFO     | [job] retrieve thread has finished
[2025-06-05 00:50:07] 2025-06-04 20:20:02,191 | INFO     | [job] job monitor thread has finished
[2025-06-05 00:50:07] 2025-06-04 20:20:02,195 | INFO     | all data control threads have been joined
[2025-06-05 00:50:07] 2025-06-04 20:20:02,404 | INFO     | all payload control threads have been joined
[2025-06-05 00:50:07] 2025-06-04 20:20:02,449 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 00:50:07] 2025-06-04 20:20:02,653 | INFO     | [job] validate thread has finished
[2025-06-05 00:50:07] 2025-06-04 20:20:02,743 | INFO     | [data] copytool_in thread has finished
[2025-06-05 00:50:07] 2025-06-04 20:20:02,802 | INFO     | [payload] validate_post thread has finished
[2025-06-05 00:50:07] 2025-06-04 20:20:02,872 | INFO     | all job control threads have been joined
[2025-06-05 00:50:07] 2025-06-04 20:20:02,898 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 00:50:07] 2025-06-04 20:20:02,998 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 00:50:07] 2025-06-04 20:20:03,070 | INFO     | [payload] failed_post thread has finished
[2025-06-05 00:50:07] 2025-06-04 20:20:03,074 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 00:50:07] 2025-06-04 20:20:03,201 | INFO     | [data] control thread has finished
[2025-06-05 00:50:07] 2025-06-04 20:20:03,274 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:50:07] 2025-06-04 20:20:03,410 | INFO     | [payload] control thread has finished
[2025-06-05 00:50:07] 2025-06-04 20:20:03,614 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 00:50:07] 2025-06-04 20:20:03,878 | INFO     | [job] control thread has finished
[2025-06-05 00:50:07] 2025-06-04 20:20:04,038 | INFO     | [data] copytool_out thread has finished
[2025-06-05 00:50:07] 2025-06-04 20:20:04,280 | INFO     | [job] queue monitor thread has finished
[2025-06-05 00:50:07] 2025-06-04 20:20:07,005 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 00:50:07] 2025-06-04 20:20:07,194 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140394009487168)>', '<ExcThread(monitor, started 140393286989568)>']
[2025-06-05 00:50:07] 2025-06-04 20:20:07,849 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 00:50:07] 2025-06-04 20:20:07,849 | INFO     | [monitor] control thread has ended
[2025-06-05 00:50:07] 2025-06-04 20:20:12,219 | INFO     | all workflow threads have been joined
[2025-06-05 00:50:07] 2025-06-04 20:20:12,219 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 00:50:07] 2025-06-04 20:20:12,220 | INFO     | traces error code: 0
[2025-06-05 00:50:07] 2025-06-04 20:20:12,220 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 00:50:07] 2025-06-04 20:20:12,584 [wrapper] ==== pilot stdout END ====
[2025-06-05 00:50:07] 2025-06-04 20:20:12,653 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 00:50:07] 2025-06-04 20:20:12,749 [wrapper] pilotpid: 6703
[2025-06-05 00:50:07] 2025-06-04 20:20:12,841 [wrapper] Pilot exit status: 0
[2025-06-05 00:50:07] 2025-06-04 20:20:13,302 [wrapper] pandaids: 6678215850
[2025-06-05 00:50:07] 2025-06-04 20:20:14,312 [wrapper] cleanup supervisor_pilot 21524 6704
[2025-06-05 00:50:07] 2025-06-04 20:20:14,415 [wrapper] Test setup, not cleaning
[2025-06-05 00:50:07] 2025-06-04 20:20:14,510 [wrapper] apfmon messages muted
[2025-06-05 00:50:07] 2025-06-04 20:20:14,594 [wrapper] ==== wrapper stdout END ====
[2025-06-05 00:50:07] 2025-06-04 20:20:14,702 [wrapper] ==== wrapper stderr END ====
[2025-06-05 00:50:07]  *** Error codes and diagnostics ***
[2025-06-05 00:50:07]     "exeErrorCode": 0,
[2025-06-05 00:50:07]     "exeErrorDiag": "",
[2025-06-05 00:50:07]     "pilotErrorCode": 0,
[2025-06-05 00:50:07]     "pilotErrorDiag": "",
[2025-06-05 00:50:07]  *** Listing of results directory ***
[2025-06-05 00:50:07] total 386396
[2025-06-05 00:50:07] -rw-r--r--. 1 boinc boinc    495897 Jun  4 01:58 pilot3.tar.gz
[2025-06-05 00:50:07] -rw-r--r--. 1 boinc boinc      5111 Jun  4 02:40 queuedata.json
[2025-06-05 00:50:07] -rwx------. 1 boinc boinc     37140 Jun  4 02:40 runpilot2-wrapper.sh
[2025-06-05 00:50:07] -rw-r--r--. 1 boinc boinc       100 Jun  4 18:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 00:50:07] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 18:38 run_atlas
[2025-06-05 00:50:07] -rw-r--r--. 1 boinc boinc       105 Jun  4 18:38 job.xml
[2025-06-05 00:50:07] -rw-r--r--. 1 boinc boinc      6392 Jun  4 18:38 init_data.xml
[2025-06-05 00:50:07] -rw-r--r--. 2 boinc boinc 216778664 Jun  4 18:38 EVNT.45006593._001968.pool.root.1
[2025-06-05 00:50:07] -rw-r--r--. 2 boinc boinc     15093 Jun  4 18:38 start_atlas.sh
[2025-06-05 00:50:07] drwxrwx--x. 2 boinc boinc        68 Jun  4 18:38 shared
[2025-06-05 00:50:07] -rw-r--r--. 2 boinc boinc    508881 Jun  4 18:38 input.tar.gz
[2025-06-05 00:50:07] -rw-r--r--. 1 boinc boinc         0 Jun  4 18:38 boinc_lockfile
[2025-06-05 00:50:07] -rw-r--r--. 1 boinc boinc      2525 Jun  4 18:38 pandaJob.out
[2025-06-05 00:50:07] -rw-------. 1 boinc boinc    990984 Jun  4 18:39 agis_schedconf.cvmfs.json
[2025-06-05 00:50:07] drwx------. 4 boinc boinc      4096 Jun  4 18:39 pilot3
[2025-06-05 00:50:07] -rw-r--r--. 1 boinc boinc       530 Jun  4 22:17 boinc_task_state.xml
[2025-06-05 00:50:07] -rw-------. 1 boinc boinc 172001111 Jun  4 22:17 HITS.45006595._049072.pool.root.1
[2025-06-05 00:50:07] -rw-------. 1 boinc boinc      1018 Jun  4 22:18 memory_monitor_summary.json
[2025-06-05 00:50:07] -rw-------. 1 boinc boinc   1598969 Jun  4 22:18 agis_ddmendpoints.agis.ALL.json
[2025-06-05 00:50:07] -rw-------. 1 boinc boinc    384791 Jun  4 22:18 log.45006595._049072.job.log.tgz.1
[2025-06-05 00:50:07] -rw-------. 1 boinc boinc        95 Jun  4 22:19 pilot_heartbeat.json
[2025-06-05 00:50:07] -rw-------. 1 boinc boinc      7687 Jun  4 22:19 heartbeat.json
[2025-06-05 00:50:07] -rw-------. 1 boinc boinc      4416 Jun  4 22:20 pilotlog.txt
[2025-06-05 00:50:07] -rw-------. 1 boinc boinc   1147557 Jun  4 22:20 log.45006595._049072.job.log.1
[2025-06-05 00:50:07] -rw-------. 1 boinc boinc       357 Jun  4 22:20 output.list
[2025-06-05 00:50:07] -rw-r--r--. 1 boinc boinc       620 Jun  4 22:20 runtime_log
[2025-06-05 00:50:07] -rw-------. 1 boinc boinc   1556480 Jun  4 22:20 result.tar.gz
[2025-06-05 00:50:07] -rw-r--r--. 1 boinc boinc      8659 Jun  4 22:20 runtime_log.err
[2025-06-05 00:50:07] -rw-------. 1 boinc boinc       657 Jun  4 22:20 q8yKDmZMrg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnemKDmOwT1Nm.diag
[2025-06-05 00:50:07] -rw-r--r--. 1 boinc boinc      8192 Jun  5 00:50 boinc_mmap_file
[2025-06-05 00:50:07] -rw-r--r--. 1 boinc boinc        28 Jun  5 00:50 wrapper_checkpoint.txt
[2025-06-05 00:50:07] -rw-r--r--. 1 boinc boinc     20493 Jun  5 00:50 stderr.txt
[2025-06-05 00:50:07] HITS file was successfully produced:
[2025-06-05 00:50:07] -rw-------. 1 boinc boinc 172001111 Jun  4 22:17 shared/HITS.pool.root.1
[2025-06-05 00:50:07]  *** Contents of shared directory: ***
[2025-06-05 00:50:07] total 381708
[2025-06-05 00:50:07] -rw-r--r--. 2 boinc boinc 216778664 Jun  4 18:38 ATLAS.root_0
[2025-06-05 00:50:07] -rw-r--r--. 2 boinc boinc     15093 Jun  4 18:38 start_atlas.sh
[2025-06-05 00:50:07] -rw-r--r--. 2 boinc boinc    508881 Jun  4 18:38 input.tar.gz
[2025-06-05 00:50:07] -rw-------. 1 boinc boinc 172001111 Jun  4 22:17 HITS.pool.root.1
[2025-06-05 00:50:07] -rw-------. 1 boinc boinc   1556480 Jun  4 22:20 result.tar.gz
00:50:09 (3006): run_atlas exited; CPU time 49593.239289
00:50:09 (3006): called boinc_finish(0)

</stderr_txt>
]]>

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