Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:50:31 (3254601): wrapper (7.7.26015): starting
22:50:31 (3254601): wrapper: running run_atlas (--nthreads 10)
[2025-06-03 22:50:31] Arguments: --nthreads 10
[2025-06-03 22:50:31] Threads: 10
[2025-06-03 22:50:31] Checking for CVMFS
[2025-06-03 22:50:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 22:50:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 22:50:31] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 22:50:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 22:50:31] 2.12.6.0 650483 23192 259008 146765 3 511 31804383 32935936 12167 16776704 0 77180982 99.488 98385734 30787 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 22:50:31] CVMFS is ok
[2025-06-03 22:50:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 22:50:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 22:50:31] Further information can be found at the LHC@home message board.
[2025-06-03 22:50:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 22:50:31] Checking for apptainer binary...
[2025-06-03 22:50:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 22:50:31] Running /usr/bin/apptainer --version
[2025-06-03 22:50:31] apptainer version 1.4.1-1.el9
[2025-06-03 22:50:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 22:50:31] c-4-36.aglt2.org
[2025-06-03 22:50:31] apptainer works
[2025-06-03 22:50:31] Set ATHENA_PROC_NUMBER=10
[2025-06-03 22:50:31] Set ATHENA_CORE_NUMBER=10
[2025-06-03 22:50:31] Starting ATLAS job with PandaID=6678214348
[2025-06-03 22:50:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 00:13:45]  *** The last 200 lines of the pilot log: ***
[2025-06-04 00:13:45]  filetype=log
[2025-06-04 00:13:45]  guid=5114dabc-a537-4b03-9529-e6c9437a2674
[2025-06-04 00:13:45]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 00:13:45]  is_altstaged=None
[2025-06-04 00:13:45]  is_tar=False
[2025-06-04 00:13:45]  lfn=log.45006595._048863.job.log.tgz.1
[2025-06-04 00:13:45]  mtime=0
[2025-06-04 00:13:45]  protocol_id=None
[2025-06-04 00:13:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 00:13:45]  replicas=None
[2025-06-04 00:13:45]  scope=mc23_13p6TeV
[2025-06-04 00:13:45]  status=None
[2025-06-04 00:13:45]  status_code=0
[2025-06-04 00:13:45]  storage_token=
[2025-06-04 00:13:45]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678214348/log.45006595._048863.job.log.tgz.1
[2025-06-04 00:13:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7e/65/log.45006595._048863.job.log.tgz.1
[2025-06-04 00:13:45]  workdir=None
[2025-06-04 00:13:45] ]
[2025-06-04 00:13:45] 2025-06-04 04:13:21,344 | INFO     | transferring file log.45006595._048863.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678214348/log.45006595._048863.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 00:13:45] 2025-06-04 04:13:21,344 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678214348/log.45006595._048863.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._048863.job
[2025-06-04 00:13:45] 2025-06-04 04:13:21,363 | INFO     | adding to output.list: log.45006595._048863.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7e/65/log.45006595._048863.job.log.tg
[2025-06-04 00:13:45] 2025-06-04 04:13:21,364 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 00:13:45] 2025-06-04 04:13:21,364 | INFO     | summary of transferred files:
[2025-06-04 00:13:45] 2025-06-04 04:13:21,364 | INFO     |  -- lfn=log.45006595._048863.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 00:13:45] 2025-06-04 04:13:21,365 | INFO     | stage-out finished correctly
[2025-06-04 00:13:45] 2025-06-04 04:13:23,475 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 00:13:45] 2025-06-04 04:13:25,278 | INFO     | job 6678214348 has state=finished
[2025-06-04 00:13:45] 2025-06-04 04:13:25,278 | INFO     | preparing for final server update for job 6678214348 in state='finished'
[2025-06-04 00:13:45] 2025-06-04 04:13:25,279 | INFO     | this job has now completed (state=finished)
[2025-06-04 00:13:45] 2025-06-04 04:13:25,279 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 00:13:45] 2025-06-04 04:13:25,279 | INFO     | log transfer has been attempted: DONE
[2025-06-04 00:13:45] 2025-06-04 04:13:25,279 | INFO     | job 6678214348 has finished - writing final server update
[2025-06-04 00:13:45] 2025-06-04 04:13:25,280 | INFO     | total number of processed events: 400 (read)
[2025-06-04 00:13:45] 2025-06-04 04:13:25,294 | INFO     | executing command: lscpu
[2025-06-04 00:13:45] 2025-06-04 04:13:25,365 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 00:13:45] 2025-06-04 04:13:27,306 | WARNING  | process 3267183 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 00:13:45] 2025-06-04 04:13:27,307 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678214348/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 00:13:45] 2025-06-04 04:13:27,663 | INFO     | number of running child processes to parent process 3267183: 1
[2025-06-04 00:13:45] 2025-06-04 04:13:27,663 | INFO     | maximum number of monitored processes: 6
[2025-06-04 00:13:45] 2025-06-04 04:13:29,435 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 00:13:45] 2025-06-04 04:13:29,436 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678214348/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 00:13:45] 2025-06-04 04:13:29,437 | INFO     | extracted standard info from prmon json
[2025-06-04 00:13:45] 2025-06-04 04:13:29,437 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 00:13:45] 2025-06-04 04:13:29,437 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 00:13:45] 2025-06-04 04:13:29,437 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 00:13:45] 2025-06-04 04:13:29,438 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 00:13:45] 2025-06-04 04:13:29,440 | INFO     | fitting pss+swap vs Time
[2025-06-04 00:13:45] 2025-06-04 04:13:29,440 | INFO     | sum of square deviations: 125630262.5
[2025-06-04 00:13:45] 2025-06-04 04:13:29,441 | INFO     | sum of deviations: 3696277675.9999986
[2025-06-04 00:13:45] 2025-06-04 04:13:29,441 | INFO     | mean x: 1749008001.5
[2025-06-04 00:13:45] 2025-06-04 04:13:29,441 | INFO     | mean y: 2322535.108108108
[2025-06-04 00:13:45] 2025-06-04 04:13:29,441 | INFO     | -- intersect: -51456769426.0332
[2025-06-04 00:13:45] 2025-06-04 04:13:29,441 | INFO     | intersect: -51456769426.0332
[2025-06-04 00:13:45] 2025-06-04 04:13:29,442 | INFO     | chi2: 1.0036727220975719
[2025-06-04 00:13:45] 2025-06-04 04:13:29,442 | INFO     | -- intersect: -51456769426.0332
[2025-06-04 00:13:45] 2025-06-04 04:13:29,442 | INFO     | current memory leak: 29.42 B/s (using 74 data points, chi2=1.00)
[2025-06-04 00:13:45] 2025-06-04 04:13:29,442 | INFO     | ..............................
[2025-06-04 00:13:45] 2025-06-04 04:13:29,443 | INFO     | . Timing measurements:
[2025-06-04 00:13:45] 2025-06-04 04:13:29,443 | INFO     | . get job = 0 s
[2025-06-04 00:13:45] 2025-06-04 04:13:29,443 | INFO     | . initial setup = 2 s
[2025-06-04 00:13:45] 2025-06-04 04:13:29,443 | INFO     | . payload setup = 7 s
[2025-06-04 00:13:45] 2025-06-04 04:13:29,443 | INFO     | . stage-in = 0 s
[2025-06-04 00:13:45] 2025-06-04 04:13:29,443 | INFO     | . payload execution = 4931 s
[2025-06-04 00:13:45] 2025-06-04 04:13:29,443 | INFO     | . stage-out = 0 s
[2025-06-04 00:13:45] 2025-06-04 04:13:29,443 | INFO     | . log creation = 0 s
[2025-06-04 00:13:45] 2025-06-04 04:13:29,443 | INFO     | ..............................
[2025-06-04 00:13:45] 2025-06-04 04:13:29,968 | INFO     | 
[2025-06-04 00:13:45] 2025-06-04 04:13:29,968 | INFO     | job summary report
[2025-06-04 00:13:45] 2025-06-04 04:13:29,968 | INFO     | --------------------------------------------------
[2025-06-04 00:13:45] 2025-06-04 04:13:29,968 | INFO     | PanDA job id: 6678214348
[2025-06-04 00:13:45] 2025-06-04 04:13:29,968 | INFO     | task id: 45006595
[2025-06-04 00:13:45] 2025-06-04 04:13:29,968 | INFO     | errors: (none)
[2025-06-04 00:13:45] 2025-06-04 04:13:29,969 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 00:13:45] 2025-06-04 04:13:29,969 | INFO     | pilot state: finished 
[2025-06-04 00:13:45] 2025-06-04 04:13:29,969 | INFO     | transexitcode: 0
[2025-06-04 00:13:45] 2025-06-04 04:13:29,969 | INFO     | exeerrorcode: 0
[2025-06-04 00:13:45] 2025-06-04 04:13:29,969 | INFO     | exeerrordiag: 
[2025-06-04 00:13:45] 2025-06-04 04:13:29,969 | INFO     | exitcode: 0
[2025-06-04 00:13:45] 2025-06-04 04:13:29,969 | INFO     | exitmsg: OK
[2025-06-04 00:13:45] 2025-06-04 04:13:29,969 | INFO     | cpuconsumptiontime: 41390 s
[2025-06-04 00:13:45] 2025-06-04 04:13:29,969 | INFO     | nevents: 400
[2025-06-04 00:13:45] 2025-06-04 04:13:29,969 | INFO     | neventsw: 0
[2025-06-04 00:13:45] 2025-06-04 04:13:29,970 | INFO     | pid: 3267183
[2025-06-04 00:13:45] 2025-06-04 04:13:29,970 | INFO     | pgrp: 3267183
[2025-06-04 00:13:45] 2025-06-04 04:13:29,970 | INFO     | corecount: 10
[2025-06-04 00:13:45] 2025-06-04 04:13:29,970 | INFO     | event service: False
[2025-06-04 00:13:45] 2025-06-04 04:13:29,970 | INFO     | sizes: {0: 2405070, 1: 2405212, 5: 2405418, 11: 2405474, 4942: 2431501, 4943: 2440442, 4945: 2440626, 4951: 2440796}
[2025-06-04 00:13:45] 2025-06-04 04:13:29,970 | INFO     | --------------------------------------------------
[2025-06-04 00:13:45] 2025-06-04 04:13:29,970 | INFO     | 
[2025-06-04 00:13:45] 2025-06-04 04:13:29,970 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 00:13:45] 2025-06-04 04:13:29,994 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 00:13:45] 2025-06-04 04:13:29,994 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 00:13:45] 2025-06-04 04:13:29,994 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 00:13:45] 2025-06-04 04:13:29,994 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 00:13:45] 2025-06-04 04:13:29,995 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 00:13:45] 2025-06-04 04:13:29,995 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 00:13:45] 2025-06-04 04:13:29,995 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 00:13:45] 2025-06-04 04:13:29,995 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 00:13:45] 2025-06-04 04:13:29,995 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 00:13:45] 2025-06-04 04:13:29,995 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 00:13:45] 2025-06-04 04:13:29,995 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 00:13:45] 2025-06-04 04:13:29,995 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 00:13:45] 2025-06-04 04:13:29,995 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 00:13:45] 2025-06-04 04:13:29,996 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 00:13:45] 2025-06-04 04:13:29,996 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 00:13:45] 2025-06-04 04:13:29,996 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 00:13:45] 2025-06-04 04:13:29,996 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 00:13:45] 2025-06-04 04:13:29,996 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 00:13:45] 2025-06-04 04:13:29,996 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 00:13:45] 2025-06-04 04:13:29,996 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 00:13:45] 2025-06-04 04:13:29,996 | INFO     | job 6678214348 has completed (purged errors)
[2025-06-04 00:13:45] 2025-06-04 04:13:29,997 | INFO     | overall cleanup function is called
[2025-06-04 00:13:45] 2025-06-04 04:13:31,005 | INFO     | --- collectZombieJob: --- 10, [3267183]
[2025-06-04 00:13:45] 2025-06-04 04:13:31,006 | INFO     | zombie collector waiting for pid 3267183
[2025-06-04 00:13:45] 2025-06-04 04:13:31,006 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 00:13:45] 2025-06-04 04:13:31,006 | INFO     | collected zombie processes
[2025-06-04 00:13:45] 2025-06-04 04:13:31,007 | INFO     | will attempt to kill all subprocesses of pid=3267183
[2025-06-04 00:13:45] 2025-06-04 04:13:31,379 | INFO     | process IDs to be killed: [3267183] (in reverse order)
[2025-06-04 00:13:45] 2025-06-04 04:13:31,491 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 00:13:45] 2025-06-04 04:13:31,491 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 00:13:45] 2025-06-04 04:13:31,505 | INFO     | did not find any defunct processes belonging to 3267183
[2025-06-04 00:13:45] 2025-06-04 04:13:31,519 | INFO     | did not find any defunct processes belonging to 3267183
[2025-06-04 00:13:45] 2025-06-04 04:13:31,520 | INFO     | ready for new job
[2025-06-04 00:13:45] 2025-06-04 04:13:31,520 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 00:13:45] 2025-06-04 04:13:31,522 | INFO     | **************************************
[2025-06-04 00:13:45] 2025-06-04 04:13:31,523 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 00:13:45] 2025-06-04 04:13:31,523 | INFO     | **************************************
[2025-06-04 00:13:45] 2025-06-04 04:13:31,523 | INFO     | 
[2025-06-04 00:13:45] 2025-06-04 04:13:31,538 | INFO     | architecture information:
[2025-06-04 00:13:45] 2025-06-04 04:13:31,538 | INFO     | executing command: cat /etc/os-release
[2025-06-04 00:13:45] 2025-06-04 04:13:31,555 | INFO     | cat /etc/os-release:
[2025-06-04 00:13:45] NAME="CentOS Linux"
[2025-06-04 00:13:45] VERSION="7 (Core)"
[2025-06-04 00:13:45] ID="centos"
[2025-06-04 00:13:45] ID_LIKE="rhel fedora"
[2025-06-04 00:13:45] VERSION_ID="7"
[2025-06-04 00:13:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 00:13:45] ANSI_COLOR="0;31"
[2025-06-04 00:13:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 00:13:45] HOME_URL="https://www.centos.org/"
[2025-06-04 00:13:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 00:13:45] 
[2025-06-04 00:13:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 00:13:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 00:13:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 00:13:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 00:13:45] 
[2025-06-04 00:13:45] 2025-06-04 04:13:31,555 | INFO     | **************************************
[2025-06-04 00:13:45] 2025-06-04 04:13:32,058 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 00:13:45] 2025-06-04 04:13:32,076 | INFO     | sufficient remaining disk space (76507250688 B)
[2025-06-04 00:13:45] 2025-06-04 04:13:32,077 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 00:13:45] 2025-06-04 04:13:32,077 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 00:13:45] 2025-06-04 04:13:32,077 | INFO     | update_server=False
[2025-06-04 00:13:45] 2025-06-04 04:13:32,077 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 00:13:45] 2025-06-04 04:13:32,077 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 00:13:45] 2025-06-04 04:13:32,078 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 00:13:45] 2025-06-04 04:13:32,078 | INFO     | aborting loop
[2025-06-04 00:13:45] 2025-06-04 04:13:32,691 | INFO     | all payload control threads have been joined
[2025-06-04 00:13:45] 2025-06-04 04:13:33,006 | INFO     | all data control threads have been joined
[2025-06-04 00:13:45] 2025-06-04 04:13:33,080 | INFO     | [job] retrieve thread has finished
[2025-06-04 00:13:45] 2025-06-04 04:13:33,083 | INFO     | [job] job monitor thread has finished
[2025-06-04 00:13:45] 2025-06-04 04:13:33,105 | INFO     | all job control threads have been joined
[2025-06-04 00:13:45] 2025-06-04 04:13:33,284 | INFO     | PID=3258577 has CPU usage=17.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 00:13:45] 2025-06-04 04:13:33,285 | INFO     | .. there are 26 such processes running
[2025-06-04 00:13:45] 2025-06-04 04:13:33,285 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 00:13:45] 2025-06-04 04:13:33,285 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 00:13:45] 2025-06-04 04:13:33,285 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 00:13:45] 2025-06-04 04:13:33,289 | INFO     | [data] copytool_in thread has finished
[2025-06-04 00:13:45] 2025-06-04 04:13:33,355 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 00:13:45] 2025-06-04 04:13:33,359 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 00:13:45] 2025-06-04 04:13:33,693 | INFO     | [payload] control thread has finished
[2025-06-04 00:13:45] 2025-06-04 04:13:34,008 | INFO     | [data] control thread has finished
[2025-06-04 00:13:45] 2025-06-04 04:13:34,084 | INFO     | [data] copytool_out thread has finished
[2025-06-04 00:13:45] 2025-06-04 04:13:34,090 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 00:13:45] 2025-06-04 04:13:34,109 | INFO     | [job] control thread has finished
[2025-06-04 00:13:45] 2025-06-04 04:13:34,140 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 00:13:45] 2025-06-04 04:13:34,264 | INFO     | [payload] validate_post thread has finished
[2025-06-04 00:13:45] 2025-06-04 04:13:34,336 | INFO     | [job] validate thread has finished
[2025-06-04 00:13:45] 2025-06-04 04:13:34,528 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 00:13:45] 2025-06-04 04:13:34,567 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 00:13:45] 2025-06-04 04:13:34,600 | INFO     | [payload] failed_post thread has finished
[2025-06-04 00:13:45] 2025-06-04 04:13:35,569 | INFO     | [job] queue monitor thread has finished
[2025-06-04 00:13:45] 2025-06-04 04:13:38,096 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 00:13:45] 2025-06-04 04:13:39,903 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140626546403136)>', '<ExcThread(monitor, started 140626054067968)>']
[2025-06-04 00:13:45] 2025-06-04 04:13:40,320 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 00:13:45] 2025-06-04 04:13:40,320 | INFO     | [monitor] control thread has ended
[2025-06-04 00:13:45] 2025-06-04 04:13:44,929 | INFO     | all workflow threads have been joined
[2025-06-04 00:13:45] 2025-06-04 04:13:44,929 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 00:13:45] 2025-06-04 04:13:44,930 | INFO     | traces error code: 0
[2025-06-04 00:13:45] 2025-06-04 04:13:44,930 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 00:13:45] 2025-06-04 04:13:45,120 [wrapper] ==== pilot stdout END ====
[2025-06-04 00:13:45] 2025-06-04 04:13:45,124 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 00:13:45] 2025-06-04 04:13:45,127 [wrapper] pilotpid: 3258577
[2025-06-04 00:13:45] 2025-06-04 04:13:45,129 [wrapper] Pilot exit status: 0
[2025-06-04 00:13:45] 2025-06-04 04:13:45,140 [wrapper] pandaids: 6678214348
[2025-06-04 00:13:45] 2025-06-04 04:13:45,214 [wrapper] cleanup supervisor_pilot 3775879 3258578
[2025-06-04 00:13:45] 2025-06-04 04:13:45,217 [wrapper] Test setup, not cleaning
[2025-06-04 00:13:45] 2025-06-04 04:13:45,220 [wrapper] apfmon messages muted
[2025-06-04 00:13:45] 2025-06-04 04:13:45,223 [wrapper] ==== wrapper stdout END ====
[2025-06-04 00:13:45] 2025-06-04 04:13:45,226 [wrapper] ==== wrapper stderr END ====
[2025-06-04 00:13:45]  *** Error codes and diagnostics ***
[2025-06-04 00:13:45]     "exeErrorCode": 0,
[2025-06-04 00:13:45]     "exeErrorDiag": "",
[2025-06-04 00:13:45]     "pilotErrorCode": 0,
[2025-06-04 00:13:45]     "pilotErrorDiag": "",
[2025-06-04 00:13:45]  *** Listing of results directory ***
[2025-06-04 00:13:45] total 393588
[2025-06-04 00:13:45] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 19:58 pilot3.tar.gz
[2025-06-04 00:13:45] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 20:32 queuedata.json
[2025-06-04 00:13:45] -rwx------. 1 boincer umatlas     37140 Jun  3 20:34 runpilot2-wrapper.sh
[2025-06-04 00:13:45] -rw-r--r--. 1 boincer umatlas       100 Jun  3 22:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 00:13:45] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 22:50 run_atlas
[2025-06-04 00:13:45] -rw-r--r--. 1 boincer umatlas       105 Jun  3 22:50 job.xml
[2025-06-04 00:13:45] -rw-r--r--. 2 boincer umatlas 219423763 Jun  3 22:50 EVNT.45006593._001960.pool.root.1
[2025-06-04 00:13:45] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 22:50 start_atlas.sh
[2025-06-04 00:13:45] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 22:50 shared
[2025-06-04 00:13:45] -rw-r--r--. 2 boincer umatlas    508882 Jun  3 22:50 input.tar.gz
[2025-06-04 00:13:45] -rw-r--r--. 1 boincer umatlas         0 Jun  3 22:50 boinc_lockfile
[2025-06-04 00:13:45] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 22:50 pandaJob.out
[2025-06-04 00:13:45] -rw-------. 1 boincer umatlas    986077 Jun  3 22:50 agis_schedconf.cvmfs.json
[2025-06-04 00:13:45] -rw-------. 1 boincer umatlas   1603667 Jun  3 22:50 agis_ddmendpoints.agis.ALL.json
[2025-06-04 00:13:45] drwx------. 4 boincer umatlas      4096 Jun  3 22:50 pilot3
[2025-06-04 00:13:45] -rw-r--r--. 1 boincer umatlas      6674 Jun  4 00:11 init_data.xml
[2025-06-04 00:13:45] -rw-------. 1 boincer umatlas        95 Jun  4 00:12 pilot_heartbeat.json
[2025-06-04 00:13:45] -rw-------. 1 boincer umatlas 178112289 Jun  4 00:12 HITS.45006595._048863.pool.root.1
[2025-06-04 00:13:45] -rw-r--r--. 1 boincer umatlas       529 Jun  4 00:12 boinc_task_state.xml
[2025-06-04 00:13:45] -rw-------. 1 boincer umatlas      1036 Jun  4 00:13 memory_monitor_summary.json
[2025-06-04 00:13:45] -rw-------. 1 boincer umatlas    349356 Jun  4 00:13 log.45006595._048863.job.log.tgz.1
[2025-06-04 00:13:45] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 00:13 boinc_mmap_file
[2025-06-04 00:13:45] -rw-r--r--. 1 boincer umatlas        27 Jun  4 00:13 wrapper_checkpoint.txt
[2025-06-04 00:13:45] -rw-------. 1 boincer umatlas      7710 Jun  4 00:13 heartbeat.json
[2025-06-04 00:13:45] -rw-------. 1 boincer umatlas      4749 Jun  4 00:13 pilotlog.txt
[2025-06-04 00:13:45] -rw-------. 1 boincer umatlas    480851 Jun  4 00:13 log.45006595._048863.job.log.1
[2025-06-04 00:13:45] -rw-------. 1 boincer umatlas       357 Jun  4 00:13 output.list
[2025-06-04 00:13:45] -rw-r--r--. 1 boincer umatlas       620 Jun  4 00:13 runtime_log
[2025-06-04 00:13:45] -rw-------. 1 boincer umatlas    849920 Jun  4 00:13 result.tar.gz
[2025-06-04 00:13:45] -rw-r--r--. 1 boincer umatlas      8651 Jun  4 00:13 runtime_log.err
[2025-06-04 00:13:45] -rw-------. 1 boincer umatlas       650 Jun  4 00:13 N8tLDmYGrg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKdmKDm2UDJOo.diag
[2025-06-04 00:13:45] -rw-r--r--. 1 boincer umatlas     21310 Jun  4 00:13 stderr.txt
[2025-06-04 00:13:45] HITS file was successfully produced:
[2025-06-04 00:13:45] -rw-------. 1 boincer umatlas 178112289 Jun  4 00:12 shared/HITS.pool.root.1
[2025-06-04 00:13:45]  *** Contents of shared directory: ***
[2025-06-04 00:13:45] total 389576
[2025-06-04 00:13:45] -rw-r--r--. 2 boincer umatlas 219423763 Jun  3 22:50 ATLAS.root_0
[2025-06-04 00:13:45] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 22:50 start_atlas.sh
[2025-06-04 00:13:45] -rw-r--r--. 2 boincer umatlas    508882 Jun  3 22:50 input.tar.gz
[2025-06-04 00:13:45] -rw-------. 1 boincer umatlas 178112289 Jun  4 00:12 HITS.pool.root.1
[2025-06-04 00:13:45] -rw-------. 1 boincer umatlas    849920 Jun  4 00:13 result.tar.gz
00:13:46 (3254601): run_atlas exited; CPU time 41482.209080
00:13:46 (3254601): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN