Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-04 12:54:48 (3308): Detected: vboxwrapper 26206
2025-06-04 12:54:48 (3308): Detected: BOINC client v8.0.2
2025-06-04 12:54:48 (3308): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2025-06-04 12:54:49 (3308): Successfully copied 'init_data.xml' to the shared directory.
2025-06-04 12:54:49 (3308): Create VM. (boinc_ec479e296b3c8995, slot#33)
2025-06-04 12:54:50 (3308): Setting Memory Size for VM. (4800MB)
2025-06-04 12:54:50 (3308): Setting CPU Count for VM. (8)
2025-06-04 12:54:50 (3308): Setting Chipset Options for VM.
2025-06-04 12:54:50 (3308): Setting Graphics Controller Options for VM.
2025-06-04 12:54:51 (3308): Setting Boot Options for VM.
2025-06-04 12:54:51 (3308): Setting Network Configuration for NAT.
2025-06-04 12:54:51 (3308): Enabling VM Network Access.
2025-06-04 12:54:51 (3308): Disabling USB Support for VM.
2025-06-04 12:54:52 (3308): Disabling COM Port Support for VM.
2025-06-04 12:54:52 (3308): Disabling LPT Port Support for VM.
2025-06-04 12:54:52 (3308): Disabling Audio Support for VM.
2025-06-04 12:54:52 (3308): Disabling Clipboard Support for VM.
2025-06-04 12:54:53 (3308): Disabling Drag and Drop Support for VM.
2025-06-04 12:54:53 (3308): Adding storage controller(s) to VM.
2025-06-04 12:54:53 (3308): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-04 12:54:54 (3308): Adding VirtualBox Guest Additions to VM.
2025-06-04 12:54:54 (3308): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-04 12:54:54 (3308): forwarding host port 60645 to guest port 80
2025-06-04 12:54:55 (3308): Enabling remote desktop for VM.
2025-06-04 12:54:55 (3308): Required extension pack not installed, remote desktop not enabled.
2025-06-04 12:54:55 (3308): Enabling shared directory for VM.
2025-06-04 12:54:55 (3308): Starting VM using VBoxManage interface. (boinc_ec479e296b3c8995, slot#33)
2025-06-04 12:54:59 (3308): Successfully started VM. (PID = '16380')
2025-06-04 12:54:59 (3308): Reporting VM Process ID to BOINC.
2025-06-04 12:54:59 (3308): Guest Log: BIOS: VirtualBox 5.2.44
2025-06-04 12:54:59 (3308): Guest Log: CPUID EDX: 0x178bfbff
2025-06-04 12:54:59 (3308): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-04 12:54:59 (3308): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-04 12:54:59 (3308): Detected: Web Application Enabled (http://localhost:60645)
2025-06-04 12:54:59 (3308): Preference change detected
2025-06-04 12:54:59 (3308): Setting CPU throttle for VM. (100%)
2025-06-04 12:55:00 (3308): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-04 12:55:01 (3308): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-04 12:55:01 (3308): Guest Log: BIOS: Booting from Hard Disk...
2025-06-04 12:55:06 (3308): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-04 12:55:06 (3308): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-04 12:55:06 (3308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-04 12:55:06 (3308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-04 12:55:06 (3308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-04 12:55:06 (3308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-04 12:55:06 (3308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-04 12:55:06 (3308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-04 12:55:06 (3308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-04 12:55:06 (3308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-04 12:55:06 (3308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-04 12:55:06 (3308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-04 12:55:06 (3308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-04 12:55:06 (3308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-04 12:55:06 (3308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-04 12:55:06 (3308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-04 12:55:06 (3308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-04 12:55:07 (3308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-04 12:55:07 (3308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-04 12:55:07 (3308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-04 12:55:07 (3308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-04 12:55:07 (3308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-04 12:55:07 (3308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-04 12:55:07 (3308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-04 12:55:07 (3308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-04 12:55:07 (3308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-04 12:55:07 (3308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-04 12:55:07 (3308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-04 12:55:07 (3308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-04 12:55:07 (3308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-04 12:55:07 (3308): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-04 12:55:07 (3308): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-04 12:55:14 (3308): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-04 12:55:14 (3308): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-04 12:55:28 (3308): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-04 12:55:28 (3308): Guest Log: 00:00:00.000252 main     Log opened 2025-06-04T12:55:25.399365000Z
2025-06-04 12:55:28 (3308): Guest Log: 00:00:00.000384 main     OS Product: Linux
2025-06-04 12:55:28 (3308): Guest Log: 00:00:00.000423 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-04 12:55:28 (3308): Guest Log: 00:00:00.000458 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-04 12:55:28 (3308): Guest Log: 00:00:00.000495 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-04 12:55:28 (3308): Guest Log: 00:00:00.000496 main     Process ID: 1362
2025-06-04 12:55:28 (3308): Guest Log: 00:00:00.000496 main     Package type: LINUX_64BITS_GENERIC
2025-06-04 12:55:28 (3308): Guest Log: 00:00:00.001830 main     5.2.32 r132073 started. Verbose level = 0
2025-06-04 12:55:28 (3308): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-04 12:55:28 (3308): Guest Log: [INFO] Mounting shared directory
2025-06-04 12:55:28 (3308): Guest Log: [INFO] Checking for init_data.xml
2025-06-04 12:55:32 (3308): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-04 12:55:32 (3308): Guest Log: [INFO] Detected branch: prod
2025-06-04 12:55:32 (3308): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-04 12:55:32 (3308): Guest Log: Copying input files
2025-06-04 12:55:34 (3308): Guest Log: Copied input files into RunAtlas.
2025-06-04 12:55:34 (3308): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-04 12:55:34 (3308): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-04 12:55:34 (3308): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-04 12:55:34 (3308): Guest Log: Further information can be found at the LHC@home message board.
2025-06-04 12:55:38 (3308): Guest Log: 00:00:10.004475 timesync vgsvcTimeSyncWorker: Radical guest time change: -35 988 100 757 000ns (GuestNow=1 749 005 737 301 880 000 ns GuestLast=1 749 041 725 402 637 000 ns fSetTimeLastLoop=true )
2025-06-04 12:55:42 (3308): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-04 12:55:42 (3308): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-04 12:55:42 (3308): Guest Log: 2.6.3.0 1638 0 30204 146765 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-06-04 12:55:59 (3308): Guest Log: copied the webapp to /var/www
2025-06-04 12:55:59 (3308): Guest Log: ATHENA_PROC_NUMBER=8
2025-06-04 12:55:59 (3308): Guest Log: ATHENA_CORE_NUMBER=8
2025-06-04 12:56:02 (3308): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-04 12:56:02 (3308): Guest Log:  *** Starting ATLAS job. (PandaID=6666806959 taskID=44871837) ***
2025-06-04 14:35:10 (3308): Status Report: Elapsed Time: '6000.000000'
2025-06-04 14:35:10 (3308): Status Report: CPU Time: '40854.359375'
2025-06-04 15:11:53 (3308): Guest Log:  *** Job finished ***
2025-06-04 15:11:53 (3308): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-04 15:11:53 (3308): Guest Log: 2025-06-04 05:11:40,177 | INFO     | [data] copytool_out thread has finished
2025-06-04 15:11:53 (3308): Guest Log: 2025-06-04 05:11:41,099 | INFO     | [job] queue monitor thread has finished
2025-06-04 15:11:53 (3308): Guest Log: 2025-06-04 05:11:42,178 | INFO     | [data] queue_monitor thread has finished
2025-06-04 15:11:53 (3308): Guest Log: 2025-06-04 05:11:42,568 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140213207295808)>', '<ExcThread(monitor, started 140212478924544)>']
2025-06-04 15:11:53 (3308): Guest Log: 2025-06-04 05:11:43,225 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-04 15:11:53 (3308): Guest Log: 2025-06-04 05:11:43,226 | INFO     | [monitor] control thread has ended
2025-06-04 15:11:53 (3308): Guest Log: 2025-06-04 05:11:47,575 | INFO     | all workflow threads have been joined
2025-06-04 15:11:53 (3308): Guest Log: 2025-06-04 05:11:47,575 | INFO     | end of generic workflow (traces error code: 0)
2025-06-04 15:11:53 (3308): Guest Log: 2025-06-04 05:11:47,575 | INFO     | traces error code: 0
2025-06-04 15:11:53 (3308): Guest Log: 2025-06-04 05:11:47,576 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-04 15:11:53 (3308): Guest Log: 2025-06-04 05:11:47,783 [wrapper] ==== pilot stdout END ====
2025-06-04 15:11:53 (3308): Guest Log: 2025-06-04 05:11:47,793 [wrapper] ==== wrapper stdout RESUME ====
2025-06-04 15:11:53 (3308): Guest Log: 2025-06-04 05:11:47,805 [wrapper] pilotpid: 5992
2025-06-04 15:11:53 (3308): Guest Log: 2025-06-04 05:11:47,820 [wrapper] Pilot exit status: 0
2025-06-04 15:11:53 (3308): Guest Log: 2025-06-04 05:11:47,893 [wrapper] pandaids: 6666806959
2025-06-04 15:11:53 (3308): Guest Log: 2025-06-04 05:11:47,952 [wrapper] cleanup supervisor_pilot  3796 5993
2025-06-04 15:11:53 (3308): Guest Log: 2025-06-04 05:11:47,964 [wrapper] Test setup, not cleaning
2025-06-04 15:11:53 (3308): Guest Log: 2025-06-04 05:11:47,978 [wrapper] apfmon messages muted
2025-06-04 15:11:53 (3308): Guest Log: 2025-06-04 05:11:47,988 [wrapper] ==== wrapper stdout END ====
2025-06-04 15:11:53 (3308): Guest Log: 2025-06-04 05:11:47,997 [wrapper] ==== wrapper stderr END ====
2025-06-04 15:11:53 (3308): Guest Log:  *** Error codes and diagnostics ***
2025-06-04 15:11:53 (3308): Guest Log:     "exeErrorCode": 0,
2025-06-04 15:11:53 (3308): Guest Log:     "exeErrorDiag": "",
2025-06-04 15:11:53 (3308): Guest Log:     "pilotErrorCode": 0,
2025-06-04 15:11:53 (3308): Guest Log:     "pilotErrorDiag": "",
2025-06-04 15:11:53 (3308): Guest Log:  *** Listing of results directory ***
2025-06-04 15:11:53 (3308): Guest Log: total 196912
2025-06-04 15:11:53 (3308): Guest Log: -rw-r--r--. 1 atlas atlas    495897 May 27 06:47 pilot3.tar.gz
2025-06-04 15:11:53 (3308): Guest Log: -rwx------. 1 atlas atlas     37140 May 27 06:53 runpilot2-wrapper.sh
2025-06-04 15:11:53 (3308): Guest Log: -rw-r--r--. 1 atlas atlas      5111 May 27 06:53 queuedata.json
2025-06-04 15:11:53 (3308): Guest Log: -rwxr-xr-x. 1 atlas atlas      9030 Jun  4 02:55 init_data.xml
2025-06-04 15:11:53 (3308): Guest Log: -rwxr-xr-x. 1 atlas atlas    508877 Jun  4 02:55 input.tar.gz
2025-06-04 15:11:53 (3308): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  4 02:55 start_atlas.sh
2025-06-04 15:11:53 (3308): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  4 02:55 EVNT.44871834._002512.pool.root.1 -> /data/./ATLAS.root_0
2025-06-04 15:11:53 (3308): Guest Log: -rw-r--r--. 1 atlas atlas      2558 Jun  4 02:56 pandaJob.out
2025-06-04 15:11:53 (3308): Guest Log: -rw-------. 1 atlas atlas    986077 Jun  4 02:56 agis_schedconf.cvmfs.json
2025-06-04 15:11:53 (3308): Guest Log: -rw-------. 1 atlas atlas   1603667 Jun  4 02:56 agis_ddmendpoints.agis.ALL.json
2025-06-04 15:11:53 (3308): Guest Log: drwx------. 4 atlas atlas      4096 Jun  4 02:56 pilot3
2025-06-04 15:11:53 (3308): Guest Log: -rw-------. 1 atlas atlas 195793714 Jun  4 05:10 HITS.44871837._063707.pool.root.1
2025-06-04 15:11:53 (3308): Guest Log: -rw-------. 1 atlas atlas      1038 Jun  4 05:11 memory_monitor_summary.json
2025-06-04 15:11:53 (3308): Guest Log: -rw-------. 1 atlas atlas    342351 Jun  4 05:11 log.44871837._063707.job.log.tgz.1
2025-06-04 15:11:53 (3308): Guest Log: -rw-------. 1 atlas atlas        95 Jun  4 05:11 pilot_heartbeat.json
2025-06-04 15:11:53 (3308): Guest Log: -rw-------. 1 atlas atlas      7741 Jun  4 05:11 heartbeat.json
2025-06-04 15:11:53 (3308): Guest Log: -rw-------. 1 atlas atlas      4413 Jun  4 05:11 pilotlog.txt
2025-06-04 15:11:53 (3308): Guest Log: -rw-------. 1 atlas atlas    698267 Jun  4 05:11 log.44871837._063707.job.log.1
2025-06-04 15:11:53 (3308): Guest Log: -rw-------. 1 atlas atlas       357 Jun  4 05:11 output.list
2025-06-04 15:11:53 (3308): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  4 05:11 runtime_log
2025-06-04 15:11:53 (3308): Guest Log: -rw-------. 1 atlas atlas   1054720 Jun  4 05:11 result.tar.gz
2025-06-04 15:11:53 (3308): Guest Log: -rw-r--r--. 1 atlas atlas      8577 Jun  4 05:11 runtime_log.err
2025-06-04 15:11:53 (3308): Guest Log: -rw-------. 1 atlas atlas       648 Jun  4 05:11 E5NMDm3M3d7n9Rq4apOajLDm4fhM0noT9bVof3QYDmtTRKDmKSogBo.diag
2025-06-04 15:11:53 (3308): Guest Log: Looking for outputfile HITS.44871837._063707.pool.root.1
2025-06-04 15:11:53 (3308): Guest Log: HITS file was successfully produced
2025-06-04 15:11:53 (3308): Guest Log: -rw-------. 1 atlas atlas 195793714 Jun  4 05:10 /home/atlas/RunAtlas/HITS.44871837._063707.pool.root.1
2025-06-04 15:11:54 (3308): Guest Log: Successfully finished the ATLAS job!
2025-06-04 15:11:54 (3308): Guest Log: Copying the results back to the shared directory!
2025-06-04 15:11:54 (3308): Guest Log:  *** Contents of shared directory: ***
2025-06-04 15:11:54 (3308): Guest Log: total 414852
2025-06-04 15:11:54 (3308): Guest Log: -rwxrwxrwx. 1 root root 227413454 Jun  4 02:54 ATLAS.root_0
2025-06-04 15:11:54 (3308): Guest Log: -rwxrwxrwx. 1 root root 195793714 Jun  4  2025 HITS.pool.root.1
2025-06-04 15:11:54 (3308): Guest Log: -rwxrwxrwx. 1 root root      9030 Jun  4 02:54 init_data.xml
2025-06-04 15:11:54 (3308): Guest Log: -rwxrwxrwx. 1 root root    508877 Jun  4 02:53 input.tar.gz
2025-06-04 15:11:54 (3308): Guest Log: -rwxrwxrwx. 1 root root   1054720 Jun  4  2025 result.tar.gz
2025-06-04 15:11:54 (3308): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  4 02:53 start_atlas.sh
2025-06-04 15:11:54 (3308): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-04 15:11:54 (3308): VM Completion File Detected.
2025-06-04 15:11:54 (3308): Powering off VM.
2025-06-04 15:11:56 (3308): Successfully stopped VM.
2025-06-04 15:11:56 (3308): Deregistering VM. (boinc_ec479e296b3c8995, slot#33)
2025-06-04 15:11:56 (3308): Removing network bandwidth throttle group from VM.
2025-06-04 15:11:56 (3308): Removing VM from VirtualBox.
15:12:02 (3308): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN