Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:48:41 (2355216): wrapper (7.7.26015): starting
22:48:41 (2355216): wrapper: running run_atlas (--nthreads 10)
[2025-06-03 22:48:41] Arguments: --nthreads 10
[2025-06-03 22:48:41] Threads: 10
[2025-06-03 22:48:41] Checking for CVMFS
[2025-06-03 22:48:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 22:48:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 22:48:41] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 22:48:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 22:48:41] 2.12.6.0 551375 178423 311488 146765 2 492 17207460 32935937 13895 130560 1 374695278 99.660 341491950 26782 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 22:48:41] CVMFS is ok
[2025-06-03 22:48:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 22:48:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 22:48:41] Further information can be found at the LHC@home message board.
[2025-06-03 22:48:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 22:48:41] Checking for apptainer binary...
[2025-06-03 22:48:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 22:48:41] Running /usr/bin/apptainer --version
[2025-06-03 22:48:41] apptainer version 1.4.1-1.el9
[2025-06-03 22:48:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 22:48:41] c-4-40.aglt2.org
[2025-06-03 22:48:41] apptainer works
[2025-06-03 22:48:41] Set ATHENA_PROC_NUMBER=10
[2025-06-03 22:48:41] Set ATHENA_CORE_NUMBER=10
[2025-06-03 22:48:41] Starting ATLAS job with PandaID=6678150877
[2025-06-03 22:48:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 00:09:14]  *** The last 200 lines of the pilot log: ***
[2025-06-04 00:09:14]  is_altstaged=None
[2025-06-04 00:09:14]  is_tar=False
[2025-06-04 00:09:14]  lfn=log.45006595._046778.job.log.tgz.1
[2025-06-04 00:09:14]  mtime=0
[2025-06-04 00:09:14]  protocol_id=None
[2025-06-04 00:09:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 00:09:14]  replicas=None
[2025-06-04 00:09:14]  scope=mc23_13p6TeV
[2025-06-04 00:09:14]  status=None
[2025-06-04 00:09:14]  status_code=0
[2025-06-04 00:09:14]  storage_token=
[2025-06-04 00:09:14]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678150877/log.45006595._046778.job.log.tgz.1
[2025-06-04 00:09:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e7/58/log.45006595._046778.job.log.tgz.1
[2025-06-04 00:09:14]  workdir=None
[2025-06-04 00:09:14] ]
[2025-06-04 00:09:14] 2025-06-04 04:08:47,120 | INFO     | transferring file log.45006595._046778.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678150877/log.45006595._046778.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 00:09:14] 2025-06-04 04:08:47,121 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678150877/log.45006595._046778.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._046778.job
[2025-06-04 00:09:14] 2025-06-04 04:08:47,139 | INFO     | adding to output.list: log.45006595._046778.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e7/58/log.45006595._046778.job.log.tg
[2025-06-04 00:09:14] 2025-06-04 04:08:47,140 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 00:09:14] 2025-06-04 04:08:47,140 | INFO     | summary of transferred files:
[2025-06-04 00:09:14] 2025-06-04 04:08:47,140 | INFO     |  -- lfn=log.45006595._046778.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 00:09:14] 2025-06-04 04:08:47,141 | INFO     | stage-out finished correctly
[2025-06-04 00:09:14] 2025-06-04 04:08:50,299 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 00:09:14] 2025-06-04 04:08:50,380 | INFO     | job 6678150877 has state=finished
[2025-06-04 00:09:14] 2025-06-04 04:08:50,380 | INFO     | preparing for final server update for job 6678150877 in state='finished'
[2025-06-04 00:09:14] 2025-06-04 04:08:50,381 | INFO     | this job has now completed (state=finished)
[2025-06-04 00:09:14] 2025-06-04 04:08:50,381 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 00:09:14] 2025-06-04 04:08:50,381 | INFO     | log transfer has been attempted: DONE
[2025-06-04 00:09:14] 2025-06-04 04:08:50,381 | INFO     | job 6678150877 has finished - writing final server update
[2025-06-04 00:09:14] 2025-06-04 04:08:50,382 | INFO     | total number of processed events: 400 (read)
[2025-06-04 00:09:14] 2025-06-04 04:08:50,395 | INFO     | executing command: lscpu
[2025-06-04 00:09:14] 2025-06-04 04:08:50,464 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 00:09:14] 2025-06-04 04:08:50,651 | WARNING  | process 2367209 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 00:09:14] 2025-06-04 04:08:50,651 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678150877/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 00:09:14] 2025-06-04 04:08:50,987 | INFO     | number of running child processes to parent process 2367209: 1
[2025-06-04 00:09:14] 2025-06-04 04:08:50,987 | INFO     | maximum number of monitored processes: 6
[2025-06-04 00:09:14] 2025-06-04 04:08:53,490 | INFO     | monitor loop #353: job 0:6678150877 is in state 'finished'
[2025-06-04 00:09:14] 2025-06-04 04:08:53,490 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 00:09:14] 2025-06-04 04:08:54,216 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 00:09:14] 2025-06-04 04:08:54,217 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678150877/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 00:09:14] 2025-06-04 04:08:54,217 | INFO     | extracted standard info from prmon json
[2025-06-04 00:09:14] 2025-06-04 04:08:54,217 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 00:09:14] 2025-06-04 04:08:54,217 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 00:09:14] 2025-06-04 04:08:54,218 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 00:09:14] 2025-06-04 04:08:54,218 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 00:09:14] 2025-06-04 04:08:54,219 | INFO     | fitting pss+swap vs Time
[2025-06-04 00:09:14] 2025-06-04 04:08:54,219 | INFO     | sum of square deviations: 115715658.0
[2025-06-04 00:09:14] 2025-06-04 04:08:54,219 | INFO     | sum of deviations: 5606127774.0
[2025-06-04 00:09:14] 2025-06-04 04:08:54,220 | INFO     | mean x: 1749007829.5
[2025-06-04 00:09:14] 2025-06-04 04:08:54,220 | INFO     | mean y: 2253707.0
[2025-06-04 00:09:14] 2025-06-04 04:08:54,220 | INFO     | -- intersect: -84732703855.12532
[2025-06-04 00:09:14] 2025-06-04 04:08:54,220 | INFO     | intersect: -84732703855.12532
[2025-06-04 00:09:14] 2025-06-04 04:08:54,220 | INFO     | chi2: 1.0890863072343449
[2025-06-04 00:09:14] 2025-06-04 04:08:54,220 | INFO     | -- intersect: -84732703855.12532
[2025-06-04 00:09:14] 2025-06-04 04:08:54,220 | INFO     | current memory leak: 48.45 B/s (using 72 data points, chi2=1.09)
[2025-06-04 00:09:14] 2025-06-04 04:08:54,220 | INFO     | ..............................
[2025-06-04 00:09:14] 2025-06-04 04:08:54,220 | INFO     | . Timing measurements:
[2025-06-04 00:09:14] 2025-06-04 04:08:54,221 | INFO     | . get job = 0 s
[2025-06-04 00:09:14] 2025-06-04 04:08:54,221 | INFO     | . initial setup = 2 s
[2025-06-04 00:09:14] 2025-06-04 04:08:54,221 | INFO     | . payload setup = 6 s
[2025-06-04 00:09:14] 2025-06-04 04:08:54,221 | INFO     | . stage-in = 0 s
[2025-06-04 00:09:14] 2025-06-04 04:08:54,221 | INFO     | . payload execution = 4767 s
[2025-06-04 00:09:14] 2025-06-04 04:08:54,221 | INFO     | . stage-out = 0 s
[2025-06-04 00:09:14] 2025-06-04 04:08:54,221 | INFO     | . log creation = 0 s
[2025-06-04 00:09:14] 2025-06-04 04:08:54,221 | INFO     | ..............................
[2025-06-04 00:09:14] 2025-06-04 04:08:54,308 | INFO     | 
[2025-06-04 00:09:14] 2025-06-04 04:08:54,309 | INFO     | job summary report
[2025-06-04 00:09:14] 2025-06-04 04:08:54,309 | INFO     | --------------------------------------------------
[2025-06-04 00:09:14] 2025-06-04 04:08:54,309 | INFO     | PanDA job id: 6678150877
[2025-06-04 00:09:14] 2025-06-04 04:08:54,309 | INFO     | task id: 45006595
[2025-06-04 00:09:14] 2025-06-04 04:08:54,309 | INFO     | errors: (none)
[2025-06-04 00:09:14] 2025-06-04 04:08:54,309 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 00:09:14] 2025-06-04 04:08:54,309 | INFO     | pilot state: finished 
[2025-06-04 00:09:14] 2025-06-04 04:08:54,309 | INFO     | transexitcode: 0
[2025-06-04 00:09:14] 2025-06-04 04:08:54,309 | INFO     | exeerrorcode: 0
[2025-06-04 00:09:14] 2025-06-04 04:08:54,309 | INFO     | exeerrordiag: 
[2025-06-04 00:09:14] 2025-06-04 04:08:54,309 | INFO     | exitcode: 0
[2025-06-04 00:09:14] 2025-06-04 04:08:54,309 | INFO     | exitmsg: OK
[2025-06-04 00:09:14] 2025-06-04 04:08:54,309 | INFO     | cpuconsumptiontime: 39728 s
[2025-06-04 00:09:14] 2025-06-04 04:08:54,309 | INFO     | nevents: 400
[2025-06-04 00:09:14] 2025-06-04 04:08:54,310 | INFO     | neventsw: 0
[2025-06-04 00:09:14] 2025-06-04 04:08:54,310 | INFO     | pid: 2367209
[2025-06-04 00:09:14] 2025-06-04 04:08:54,310 | INFO     | pgrp: 2367209
[2025-06-04 00:09:14] 2025-06-04 04:08:54,310 | INFO     | corecount: 10
[2025-06-04 00:09:14] 2025-06-04 04:08:54,310 | INFO     | event service: False
[2025-06-04 00:09:14] 2025-06-04 04:08:54,310 | INFO     | sizes: {0: 2404956, 1: 2405211, 5: 2405417, 12: 2405473, 4777: 2431472, 4779: 2440413, 4782: 2440597, 4786: 2440767}
[2025-06-04 00:09:14] 2025-06-04 04:08:54,310 | INFO     | --------------------------------------------------
[2025-06-04 00:09:14] 2025-06-04 04:08:54,310 | INFO     | 
[2025-06-04 00:09:14] 2025-06-04 04:08:54,310 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 00:09:14] 2025-06-04 04:08:54,328 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 00:09:14] 2025-06-04 04:08:54,329 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 00:09:14] 2025-06-04 04:08:54,329 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 00:09:14] 2025-06-04 04:08:54,329 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 00:09:14] 2025-06-04 04:08:54,329 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 00:09:14] 2025-06-04 04:08:54,329 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 00:09:14] 2025-06-04 04:08:54,329 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 00:09:14] 2025-06-04 04:08:54,329 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 00:09:14] 2025-06-04 04:08:54,329 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 00:09:14] 2025-06-04 04:08:54,330 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 00:09:14] 2025-06-04 04:08:54,330 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 00:09:14] 2025-06-04 04:08:54,330 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 00:09:14] 2025-06-04 04:08:54,330 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 00:09:14] 2025-06-04 04:08:54,330 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 00:09:14] 2025-06-04 04:08:54,330 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 00:09:14] 2025-06-04 04:08:54,330 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 00:09:14] 2025-06-04 04:08:54,330 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 00:09:14] 2025-06-04 04:08:54,330 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 00:09:14] 2025-06-04 04:08:54,330 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 00:09:14] 2025-06-04 04:08:54,331 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 00:09:14] 2025-06-04 04:08:54,331 | INFO     | job 6678150877 has completed (purged errors)
[2025-06-04 00:09:14] 2025-06-04 04:08:54,331 | INFO     | overall cleanup function is called
[2025-06-04 00:09:14] 2025-06-04 04:08:55,166 | INFO     | 4805s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 00:09:14] 2025-06-04 04:08:55,339 | INFO     | --- collectZombieJob: --- 10, [2367209]
[2025-06-04 00:09:14] 2025-06-04 04:08:55,339 | INFO     | zombie collector waiting for pid 2367209
[2025-06-04 00:09:14] 2025-06-04 04:08:55,340 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 00:09:14] 2025-06-04 04:08:55,340 | INFO     | collected zombie processes
[2025-06-04 00:09:14] 2025-06-04 04:08:55,340 | INFO     | will attempt to kill all subprocesses of pid=2367209
[2025-06-04 00:09:14] 2025-06-04 04:08:55,704 | INFO     | process IDs to be killed: [2367209] (in reverse order)
[2025-06-04 00:09:14] 2025-06-04 04:08:55,799 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 00:09:14] 2025-06-04 04:08:55,799 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 00:09:14] 2025-06-04 04:08:55,813 | INFO     | did not find any defunct processes belonging to 2367209
[2025-06-04 00:09:14] 2025-06-04 04:08:55,826 | INFO     | did not find any defunct processes belonging to 2367209
[2025-06-04 00:09:14] 2025-06-04 04:08:55,827 | INFO     | ready for new job
[2025-06-04 00:09:14] 2025-06-04 04:08:55,827 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 00:09:14] 2025-06-04 04:08:55,830 | INFO     | **************************************
[2025-06-04 00:09:14] 2025-06-04 04:08:55,831 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 00:09:14] 2025-06-04 04:08:55,831 | INFO     | **************************************
[2025-06-04 00:09:14] 2025-06-04 04:08:55,831 | INFO     | 
[2025-06-04 00:09:14] 2025-06-04 04:08:55,845 | INFO     | architecture information:
[2025-06-04 00:09:14] 2025-06-04 04:08:55,846 | INFO     | executing command: cat /etc/os-release
[2025-06-04 00:09:14] 2025-06-04 04:08:55,861 | INFO     | cat /etc/os-release:
[2025-06-04 00:09:14] NAME="CentOS Linux"
[2025-06-04 00:09:14] VERSION="7 (Core)"
[2025-06-04 00:09:14] ID="centos"
[2025-06-04 00:09:14] ID_LIKE="rhel fedora"
[2025-06-04 00:09:14] VERSION_ID="7"
[2025-06-04 00:09:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 00:09:14] ANSI_COLOR="0;31"
[2025-06-04 00:09:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 00:09:14] HOME_URL="https://www.centos.org/"
[2025-06-04 00:09:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 00:09:14] 
[2025-06-04 00:09:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 00:09:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 00:09:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 00:09:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 00:09:14] 
[2025-06-04 00:09:14] 2025-06-04 04:08:55,862 | INFO     | **************************************
[2025-06-04 00:09:14] 2025-06-04 04:08:56,364 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 00:09:14] 2025-06-04 04:08:56,380 | INFO     | sufficient remaining disk space (76512493568 B)
[2025-06-04 00:09:14] 2025-06-04 04:08:56,380 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 00:09:14] 2025-06-04 04:08:56,380 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 00:09:14] 2025-06-04 04:08:56,381 | INFO     | update_server=False
[2025-06-04 00:09:14] 2025-06-04 04:08:56,381 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 00:09:14] 2025-06-04 04:08:56,381 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 00:09:14] 2025-06-04 04:08:56,381 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 00:09:14] 2025-06-04 04:08:56,381 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 00:09:14] 2025-06-04 04:08:56,382 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 00:09:14] 2025-06-04 04:08:56,385 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 00:09:14] 2025-06-04 04:08:56,569 | INFO     | all data control threads have been joined
[2025-06-04 00:09:14] 2025-06-04 04:08:56,688 | INFO     | all job control threads have been joined
[2025-06-04 00:09:14] 2025-06-04 04:08:56,998 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 00:09:14] 2025-06-04 04:08:56,999 | INFO     | aborting loop
[2025-06-04 00:09:14] 2025-06-04 04:08:57,374 | INFO     | all payload control threads have been joined
[2025-06-04 00:09:14] 2025-06-04 04:08:57,385 | INFO     | [job] retrieve thread has finished
[2025-06-04 00:09:14] 2025-06-04 04:08:57,575 | INFO     | [data] control thread has finished
[2025-06-04 00:09:14] 2025-06-04 04:08:57,650 | INFO     | [payload] validate_post thread has finished
[2025-06-04 00:09:14] 2025-06-04 04:08:57,694 | INFO     | [job] control thread has finished
[2025-06-04 00:09:14] 2025-06-04 04:08:57,756 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 00:09:14] 2025-06-04 04:08:57,945 | INFO     | [payload] failed_post thread has finished
[2025-06-04 00:09:14] 2025-06-04 04:08:58,001 | INFO     | [job] job monitor thread has finished
[2025-06-04 00:09:14] 2025-06-04 04:08:58,047 | INFO     | [job] validate thread has finished
[2025-06-04 00:09:14] 2025-06-04 04:08:58,202 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 00:09:14] 2025-06-04 04:08:58,380 | INFO     | [payload] control thread has finished
[2025-06-04 00:09:14] 2025-06-04 04:08:58,396 | INFO     | [data] copytool_in thread has finished
[2025-06-04 00:09:14] 2025-06-04 04:08:58,421 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 00:09:14] 2025-06-04 04:08:58,613 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 00:09:14] 2025-06-04 04:08:59,294 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 00:09:14] 2025-06-04 04:08:59,762 | INFO     | [data] copytool_out thread has finished
[2025-06-04 00:09:14] 2025-06-04 04:09:00,300 | INFO     | [job] queue monitor thread has finished
[2025-06-04 00:09:14] 2025-06-04 04:09:00,387 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 00:09:14] 2025-06-04 04:09:07,116 | INFO     | job.realtimelogging is not enabled
[2025-06-04 00:09:14] 2025-06-04 04:09:08,116 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 00:09:14] 2025-06-04 04:09:09,162 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139630033651520)>', '<ExcThread(monitor, started 139629177071360)>']
[2025-06-04 00:09:14] 2025-06-04 04:09:09,434 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 00:09:14] 2025-06-04 04:09:09,435 | INFO     | [monitor] control thread has ended
[2025-06-04 00:09:14] 2025-06-04 04:09:14,188 | INFO     | all workflow threads have been joined
[2025-06-04 00:09:14] 2025-06-04 04:09:14,188 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 00:09:14] 2025-06-04 04:09:14,188 | INFO     | traces error code: 0
[2025-06-04 00:09:14] 2025-06-04 04:09:14,189 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 00:09:14] 2025-06-04 04:09:14,358 [wrapper] ==== pilot stdout END ====
[2025-06-04 00:09:14] 2025-06-04 04:09:14,361 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 00:09:14] 2025-06-04 04:09:14,363 [wrapper] pilotpid: 2358797
[2025-06-04 00:09:14] 2025-06-04 04:09:14,366 [wrapper] Pilot exit status: 0
[2025-06-04 00:09:14] 2025-06-04 04:09:14,376 [wrapper] pandaids: 6678150877
[2025-06-04 00:09:14] 2025-06-04 04:09:14,440 [wrapper] cleanup supervisor_pilot 2858343 2358798
[2025-06-04 00:09:14] 2025-06-04 04:09:14,443 [wrapper] Test setup, not cleaning
[2025-06-04 00:09:14] 2025-06-04 04:09:14,446 [wrapper] apfmon messages muted
[2025-06-04 00:09:14] 2025-06-04 04:09:14,449 [wrapper] ==== wrapper stdout END ====
[2025-06-04 00:09:14] 2025-06-04 04:09:14,451 [wrapper] ==== wrapper stderr END ====
[2025-06-04 00:09:14]  *** Error codes and diagnostics ***
[2025-06-04 00:09:14]     "exeErrorCode": 0,
[2025-06-04 00:09:14]     "exeErrorDiag": "",
[2025-06-04 00:09:14]     "pilotErrorCode": 0,
[2025-06-04 00:09:14]     "pilotErrorDiag": "",
[2025-06-04 00:09:14]  *** Listing of results directory ***
[2025-06-04 00:09:14] total 390296
[2025-06-04 00:09:14] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 17:57 pilot3.tar.gz
[2025-06-04 00:09:14] -rwx------. 1 boincer umatlas     37140 Jun  3 18:16 runpilot2-wrapper.sh
[2025-06-04 00:09:14] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 18:16 queuedata.json
[2025-06-04 00:09:14] -rw-r--r--. 1 boincer umatlas       100 Jun  3 22:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 00:09:14] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 22:48 run_atlas
[2025-06-04 00:09:14] -rw-r--r--. 1 boincer umatlas       105 Jun  3 22:48 job.xml
[2025-06-04 00:09:14] -rw-r--r--. 2 boincer umatlas 217503567 Jun  3 22:48 EVNT.45006593._001875.pool.root.1
[2025-06-04 00:09:14] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 22:48 start_atlas.sh
[2025-06-04 00:09:14] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 22:48 shared
[2025-06-04 00:09:14] -rw-r--r--. 2 boincer umatlas    508877 Jun  3 22:48 input.tar.gz
[2025-06-04 00:09:14] -rw-r--r--. 1 boincer umatlas         0 Jun  3 22:48 boinc_lockfile
[2025-06-04 00:09:14] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 22:48 pandaJob.out
[2025-06-04 00:09:14] -rw-------. 1 boincer umatlas    986077 Jun  3 22:48 agis_schedconf.cvmfs.json
[2025-06-04 00:09:14] -rw-------. 1 boincer umatlas   1603667 Jun  3 22:48 agis_ddmendpoints.agis.ALL.json
[2025-06-04 00:09:14] drwx------. 4 boincer umatlas      4096 Jun  3 22:48 pilot3
[2025-06-04 00:09:14] -rw-r--r--. 1 boincer umatlas      6673 Jun  4 00:03 init_data.xml
[2025-06-04 00:09:14] -rw-r--r--. 1 boincer umatlas       529 Jun  4 00:08 boinc_task_state.xml
[2025-06-04 00:09:14] -rw-------. 1 boincer umatlas 176701855 Jun  4 00:08 HITS.45006595._046778.pool.root.1
[2025-06-04 00:09:14] -rw-------. 1 boincer umatlas        95 Jun  4 00:08 pilot_heartbeat.json
[2025-06-04 00:09:14] -rw-------. 1 boincer umatlas      1041 Jun  4 00:08 memory_monitor_summary.json
[2025-06-04 00:09:14] -rw-------. 1 boincer umatlas    345110 Jun  4 00:08 log.45006595._046778.job.log.tgz.1
[2025-06-04 00:09:14] -rw-------. 1 boincer umatlas      7716 Jun  4 00:08 heartbeat.json
[2025-06-04 00:09:14] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 00:09 boinc_mmap_file
[2025-06-04 00:09:14] -rw-r--r--. 1 boincer umatlas        27 Jun  4 00:09 wrapper_checkpoint.txt
[2025-06-04 00:09:14] -rw-------. 1 boincer umatlas      4548 Jun  4 00:09 pilotlog.txt
[2025-06-04 00:09:14] -rw-------. 1 boincer umatlas    469653 Jun  4 00:09 log.45006595._046778.job.log.1
[2025-06-04 00:09:14] -rw-------. 1 boincer umatlas       357 Jun  4 00:09 output.list
[2025-06-04 00:09:14] -rw-r--r--. 1 boincer umatlas       620 Jun  4 00:09 runtime_log
[2025-06-04 00:09:14] -rw-------. 1 boincer umatlas    829440 Jun  4 00:09 result.tar.gz
[2025-06-04 00:09:14] -rw-r--r--. 1 boincer umatlas      8651 Jun  4 00:09 runtime_log.err
[2025-06-04 00:09:14] -rw-------. 1 boincer umatlas       650 Jun  4 00:09 rsjNDmI7og7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGKmKDmRwJG6m.diag
[2025-06-04 00:09:14] -rw-r--r--. 1 boincer umatlas     21435 Jun  4 00:09 stderr.txt
[2025-06-04 00:09:14] HITS file was successfully produced:
[2025-06-04 00:09:14] -rw-------. 1 boincer umatlas 176701855 Jun  4 00:08 shared/HITS.pool.root.1
[2025-06-04 00:09:14]  *** Contents of shared directory: ***
[2025-06-04 00:09:14] total 386300
[2025-06-04 00:09:14] -rw-r--r--. 2 boincer umatlas 217503567 Jun  3 22:48 ATLAS.root_0
[2025-06-04 00:09:14] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 22:48 start_atlas.sh
[2025-06-04 00:09:14] -rw-r--r--. 2 boincer umatlas    508877 Jun  3 22:48 input.tar.gz
[2025-06-04 00:09:14] -rw-------. 1 boincer umatlas 176701855 Jun  4 00:08 HITS.pool.root.1
[2025-06-04 00:09:14] -rw-------. 1 boincer umatlas    829440 Jun  4 00:09 result.tar.gz
00:09:15 (2355216): run_atlas exited; CPU time 39844.901724
00:09:15 (2355216): called boinc_finish(0)

</stderr_txt>
]]>

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