Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:44:19 (1184775): wrapper (7.7.26015): starting
00:44:19 (1184775): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 00:44:19] Arguments: --nthreads 12
[2025-06-04 00:44:19] Threads: 12
[2025-06-04 00:44:19] Checking for CVMFS
[2025-06-04 00:44:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 00:44:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 00:44:19] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 00:44:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 00:44:20] 2.12.6.0 40552 334 130564 146768 2 103 31466876 32935937 16654 16776704 0 995588 98.437 3388944 41358 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 00:44:20] CVMFS is ok
[2025-06-04 00:44:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 00:44:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 00:44:20] Further information can be found at the LHC@home message board.
[2025-06-04 00:44:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 00:44:20] Checking for apptainer binary...
[2025-06-04 00:44:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 00:44:20] Running /usr/bin/apptainer --version
[2025-06-04 00:44:20] apptainer version 1.4.1-1.el9
[2025-06-04 00:44:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 00:44:21] c6-1-26-4.aglt2.org
[2025-06-04 00:44:21] apptainer works
[2025-06-04 00:44:21] Set ATHENA_PROC_NUMBER=12
[2025-06-04 00:44:21] Set ATHENA_CORE_NUMBER=12
[2025-06-04 00:44:21] Starting ATLAS job with PandaID=6678150879
[2025-06-04 00:44:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 02:00:03]  *** The last 200 lines of the pilot log: ***
[2025-06-04 02:00:03]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678150879/log.45006595._046780.job.log.tgz.1
[2025-06-04 02:00:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b4/23/log.45006595._046780.job.log.tgz.1
[2025-06-04 02:00:03]  workdir=None
[2025-06-04 02:00:03] ]
[2025-06-04 02:00:03] 2025-06-04 05:59:39,779 | INFO     | transferring file log.45006595._046780.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678150879/log.45006595._046780.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 02:00:03] 2025-06-04 05:59:39,779 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678150879/log.45006595._046780.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._046780.job
[2025-06-04 02:00:03] 2025-06-04 05:59:39,799 | INFO     | adding to output.list: log.45006595._046780.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b4/23/log.45006595._046780.job.log.tg
[2025-06-04 02:00:03] 2025-06-04 05:59:39,800 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 02:00:03] 2025-06-04 05:59:39,800 | INFO     | summary of transferred files:
[2025-06-04 02:00:03] 2025-06-04 05:59:39,801 | INFO     |  -- lfn=log.45006595._046780.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 02:00:03] 2025-06-04 05:59:39,801 | INFO     | stage-out finished correctly
[2025-06-04 02:00:03] 2025-06-04 05:59:40,084 | INFO     | PID=1191585 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 02:00:03] 2025-06-04 05:59:40,084 | INFO     | .. there are 14 such processes running
[2025-06-04 02:00:03] 2025-06-04 05:59:41,408 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 02:00:03] 2025-06-04 05:59:42,609 | INFO     | job 6678150879 has state=finished
[2025-06-04 02:00:03] 2025-06-04 05:59:42,610 | INFO     | preparing for final server update for job 6678150879 in state='finished'
[2025-06-04 02:00:03] 2025-06-04 05:59:42,610 | INFO     | this job has now completed (state=finished)
[2025-06-04 02:00:03] 2025-06-04 05:59:42,610 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 02:00:03] 2025-06-04 05:59:42,611 | INFO     | log transfer has been attempted: DONE
[2025-06-04 02:00:03] 2025-06-04 05:59:42,611 | INFO     | job 6678150879 has finished - writing final server update
[2025-06-04 02:00:03] 2025-06-04 05:59:42,611 | INFO     | total number of processed events: 400 (read)
[2025-06-04 02:00:03] 2025-06-04 05:59:42,628 | INFO     | executing command: lscpu
[2025-06-04 02:00:03] 2025-06-04 05:59:42,679 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 02:00:03] 2025-06-04 05:59:44,722 | WARNING  | process 1201624 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 02:00:03] 2025-06-04 05:59:44,723 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678150879/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 02:00:03] 2025-06-04 05:59:44,724 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678150879/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 02:00:03] 2025-06-04 05:59:44,725 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4559812 B
[2025-06-04 02:00:03] 2025-06-04 05:59:44,725 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16032 B
[2025-06-04 02:00:03] 2025-06-04 05:59:44,725 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 02:00:03] 2025-06-04 05:59:46,160 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 02:00:03] 2025-06-04 05:59:46,166 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678150879/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 02:00:03] 2025-06-04 05:59:46,168 | INFO     | extracted standard info from prmon json
[2025-06-04 02:00:03] 2025-06-04 05:59:46,168 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 02:00:03] 2025-06-04 05:59:46,169 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 02:00:03] 2025-06-04 05:59:46,170 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 02:00:03] 2025-06-04 05:59:46,170 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 02:00:03] 2025-06-04 05:59:46,173 | INFO     | fitting pss+swap vs Time
[2025-06-04 02:00:03] 2025-06-04 05:59:46,173 | INFO     | sum of square deviations: 89117681.75757556
[2025-06-04 02:00:03] 2025-06-04 05:59:46,174 | INFO     | sum of deviations: 2488356149.21212
[2025-06-04 02:00:03] 2025-06-04 05:59:46,174 | INFO     | mean x: 1749014624.6060605
[2025-06-04 02:00:03] 2025-06-04 05:59:46,174 | INFO     | mean y: 2400169.9696969697
[2025-06-04 02:00:03] 2025-06-04 05:59:46,174 | INFO     | -- intersect: -48833826383.1347
[2025-06-04 02:00:03] 2025-06-04 05:59:46,174 | INFO     | intersect: -48833826383.1347
[2025-06-04 02:00:03] 2025-06-04 05:59:46,174 | INFO     | chi2: 1.2245883197150982
[2025-06-04 02:00:03] 2025-06-04 05:59:46,175 | INFO     | -- intersect: -48833826383.1347
[2025-06-04 02:00:03] 2025-06-04 05:59:46,175 | INFO     | current memory leak: 27.92 B/s (using 66 data points, chi2=1.22)
[2025-06-04 02:00:03] 2025-06-04 05:59:46,175 | INFO     | ..............................
[2025-06-04 02:00:03] 2025-06-04 05:59:46,175 | INFO     | . Timing measurements:
[2025-06-04 02:00:03] 2025-06-04 05:59:46,176 | INFO     | . get job = 0 s
[2025-06-04 02:00:03] 2025-06-04 05:59:46,176 | INFO     | . initial setup = 4 s
[2025-06-04 02:00:03] 2025-06-04 05:59:46,176 | INFO     | . payload setup = 14 s
[2025-06-04 02:00:03] 2025-06-04 05:59:46,176 | INFO     | . stage-in = 0 s
[2025-06-04 02:00:03] 2025-06-04 05:59:46,176 | INFO     | . payload execution = 4452 s
[2025-06-04 02:00:03] 2025-06-04 05:59:46,176 | INFO     | . stage-out = 0 s
[2025-06-04 02:00:03] 2025-06-04 05:59:46,176 | INFO     | . log creation = 0 s
[2025-06-04 02:00:03] 2025-06-04 05:59:46,176 | INFO     | ..............................
[2025-06-04 02:00:03] 2025-06-04 05:59:46,225 | INFO     | sufficient remaining disk space (75676778496 B)
[2025-06-04 02:00:03] 2025-06-04 05:59:46,241 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 02:00:03] 2025-06-04 05:59:46,277 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6678150879: 4856787 B (within 2537553920 B limit)
[2025-06-04 02:00:03] 2025-06-04 05:59:46,277 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6678150879/HITS.45006595._046780.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 02:00:03] 2025-06-04 05:59:46,277 | INFO     | total size of present files: 0 B (workdir size: 4856787 B)
[2025-06-04 02:00:03] 2025-06-04 05:59:46,278 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6678150879/HITS.45006595._046780.pool.root.1 since it does not exist
[2025-06-04 02:00:03] 2025-06-04 05:59:46,470 | INFO     | number of running child processes to parent process 1201624: 1
[2025-06-04 02:00:03] 2025-06-04 05:59:46,470 | INFO     | maximum number of monitored processes: 6
[2025-06-04 02:00:03] 2025-06-04 05:59:46,470 | INFO     | aborting job monitoring since job object (job id=6678150879) has expired
[2025-06-04 02:00:03] 2025-06-04 05:59:46,685 | INFO     | 
[2025-06-04 02:00:03] 2025-06-04 05:59:46,686 | INFO     | job summary report
[2025-06-04 02:00:03] 2025-06-04 05:59:46,686 | INFO     | --------------------------------------------------
[2025-06-04 02:00:03] 2025-06-04 05:59:46,686 | INFO     | PanDA job id: 6678150879
[2025-06-04 02:00:03] 2025-06-04 05:59:46,686 | INFO     | task id: 45006595
[2025-06-04 02:00:03] 2025-06-04 05:59:46,686 | INFO     | errors: (none)
[2025-06-04 02:00:03] 2025-06-04 05:59:46,686 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 02:00:03] 2025-06-04 05:59:46,686 | INFO     | pilot state: finished 
[2025-06-04 02:00:03] 2025-06-04 05:59:46,686 | INFO     | transexitcode: 0
[2025-06-04 02:00:03] 2025-06-04 05:59:46,686 | INFO     | exeerrorcode: 0
[2025-06-04 02:00:03] 2025-06-04 05:59:46,686 | INFO     | exeerrordiag: 
[2025-06-04 02:00:03] 2025-06-04 05:59:46,686 | INFO     | exitcode: 0
[2025-06-04 02:00:03] 2025-06-04 05:59:46,686 | INFO     | exitmsg: OK
[2025-06-04 02:00:03] 2025-06-04 05:59:46,686 | INFO     | cpuconsumptiontime: 32374 s
[2025-06-04 02:00:03] 2025-06-04 05:59:46,686 | INFO     | nevents: 400
[2025-06-04 02:00:03] 2025-06-04 05:59:46,686 | INFO     | neventsw: 0
[2025-06-04 02:00:03] 2025-06-04 05:59:46,687 | INFO     | pid: 1201624
[2025-06-04 02:00:03] 2025-06-04 05:59:46,687 | INFO     | pgrp: 1201624
[2025-06-04 02:00:03] 2025-06-04 05:59:46,687 | INFO     | corecount: 12
[2025-06-04 02:00:03] 2025-06-04 05:59:46,687 | INFO     | event service: False
[2025-06-04 02:00:03] 2025-06-04 05:59:46,687 | INFO     | sizes: {0: 2405012, 1: 2405211, 12: 2405445, 4470: 2431397, 4471: 2440338, 4473: 2440394, 4477: 2440692}
[2025-06-04 02:00:03] 2025-06-04 05:59:46,687 | INFO     | --------------------------------------------------
[2025-06-04 02:00:03] 2025-06-04 05:59:46,687 | INFO     | 
[2025-06-04 02:00:03] 2025-06-04 05:59:46,687 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 02:00:03] 2025-06-04 05:59:46,706 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 02:00:03] 2025-06-04 05:59:46,706 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 02:00:03] 2025-06-04 05:59:46,707 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 02:00:03] 2025-06-04 05:59:46,707 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 02:00:03] 2025-06-04 05:59:46,707 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 02:00:03] 2025-06-04 05:59:46,707 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 02:00:03] 2025-06-04 05:59:46,707 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 02:00:03] 2025-06-04 05:59:46,707 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 02:00:03] 2025-06-04 05:59:46,707 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 02:00:03] 2025-06-04 05:59:46,707 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 02:00:03] 2025-06-04 05:59:46,707 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 02:00:03] 2025-06-04 05:59:46,707 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 02:00:03] 2025-06-04 05:59:46,707 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 02:00:03] 2025-06-04 05:59:46,707 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 02:00:03] 2025-06-04 05:59:46,707 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 02:00:03] 2025-06-04 05:59:46,707 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 02:00:03] 2025-06-04 05:59:46,707 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 02:00:03] 2025-06-04 05:59:46,708 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 02:00:03] 2025-06-04 05:59:46,708 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 02:00:03] 2025-06-04 05:59:46,708 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 02:00:03] 2025-06-04 05:59:46,708 | INFO     | job 6678150879 has completed (purged errors)
[2025-06-04 02:00:03] 2025-06-04 05:59:46,708 | INFO     | overall cleanup function is called
[2025-06-04 02:00:03] 2025-06-04 05:59:47,715 | INFO     | --- collectZombieJob: --- 10, [1201624]
[2025-06-04 02:00:03] 2025-06-04 05:59:47,716 | INFO     | zombie collector waiting for pid 1201624
[2025-06-04 02:00:03] 2025-06-04 05:59:47,716 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 02:00:03] 2025-06-04 05:59:47,716 | INFO     | collected zombie processes
[2025-06-04 02:00:03] 2025-06-04 05:59:47,716 | INFO     | will attempt to kill all subprocesses of pid=1201624
[2025-06-04 02:00:03] 2025-06-04 05:59:47,873 | INFO     | process IDs to be killed: [1201624] (in reverse order)
[2025-06-04 02:00:03] 2025-06-04 05:59:47,952 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 02:00:03] 2025-06-04 05:59:47,952 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 02:00:03] 2025-06-04 05:59:47,959 | INFO     | did not find any defunct processes belonging to 1201624
[2025-06-04 02:00:03] 2025-06-04 05:59:47,965 | INFO     | did not find any defunct processes belonging to 1201624
[2025-06-04 02:00:03] 2025-06-04 05:59:47,966 | INFO     | ready for new job
[2025-06-04 02:00:03] 2025-06-04 05:59:47,966 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 02:00:03] 2025-06-04 05:59:47,968 | INFO     | **************************************
[2025-06-04 02:00:03] 2025-06-04 05:59:47,968 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 02:00:03] 2025-06-04 05:59:47,968 | INFO     | **************************************
[2025-06-04 02:00:03] 2025-06-04 05:59:47,968 | INFO     | 
[2025-06-04 02:00:03] 2025-06-04 05:59:47,984 | INFO     | architecture information:
[2025-06-04 02:00:03] 2025-06-04 05:59:47,984 | INFO     | executing command: cat /etc/os-release
[2025-06-04 02:00:03] 2025-06-04 05:59:47,999 | INFO     | cat /etc/os-release:
[2025-06-04 02:00:03] NAME="CentOS Linux"
[2025-06-04 02:00:03] VERSION="7 (Core)"
[2025-06-04 02:00:03] ID="centos"
[2025-06-04 02:00:03] ID_LIKE="rhel fedora"
[2025-06-04 02:00:03] VERSION_ID="7"
[2025-06-04 02:00:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 02:00:03] ANSI_COLOR="0;31"
[2025-06-04 02:00:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 02:00:03] HOME_URL="https://www.centos.org/"
[2025-06-04 02:00:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 02:00:03] 
[2025-06-04 02:00:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 02:00:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 02:00:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 02:00:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 02:00:03] 
[2025-06-04 02:00:03] 2025-06-04 05:59:47,999 | INFO     | **************************************
[2025-06-04 02:00:03] 2025-06-04 05:59:48,501 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 02:00:03] 2025-06-04 05:59:48,519 | INFO     | sufficient remaining disk space (75682021376 B)
[2025-06-04 02:00:03] 2025-06-04 05:59:48,519 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 02:00:03] 2025-06-04 05:59:48,519 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 02:00:03] 2025-06-04 05:59:48,519 | INFO     | update_server=False
[2025-06-04 02:00:03] 2025-06-04 05:59:48,520 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 02:00:03] 2025-06-04 05:59:48,520 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 02:00:03] 2025-06-04 05:59:48,520 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 02:00:03] 2025-06-04 05:59:48,521 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 02:00:03] 2025-06-04 05:59:48,521 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 02:00:03] 2025-06-04 05:59:48,521 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 02:00:03] 2025-06-04 05:59:48,715 | INFO     | all payload control threads have been joined
[2025-06-04 02:00:03] 2025-06-04 05:59:48,972 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 02:00:03] 2025-06-04 05:59:48,973 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 02:00:03] 2025-06-04 05:59:48,973 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:00:03] 2025-06-04 05:59:48,973 | INFO     | will abort loop
[2025-06-04 02:00:03] 2025-06-04 05:59:49,523 | INFO     | [job] retrieve thread has finished
[2025-06-04 02:00:03] 2025-06-04 05:59:49,615 | INFO     | all data control threads have been joined
[2025-06-04 02:00:03] 2025-06-04 05:59:49,628 | INFO     | [payload] validate_post thread has finished
[2025-06-04 02:00:03] 2025-06-04 05:59:49,720 | INFO     | [payload] control thread has finished
[2025-06-04 02:00:03] 2025-06-04 05:59:49,902 | INFO     | [payload] failed_post thread has finished
[2025-06-04 02:00:03] 2025-06-04 05:59:49,977 | INFO     | [job] job monitor thread has finished
[2025-06-04 02:00:03] 2025-06-04 05:59:50,024 | INFO     | all job control threads have been joined
[2025-06-04 02:00:03] 2025-06-04 05:59:50,286 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 02:00:03] 2025-06-04 05:59:50,345 | INFO     | [job] validate thread has finished
[2025-06-04 02:00:03] 2025-06-04 05:59:50,415 | INFO     | [data] copytool_in thread has finished
[2025-06-04 02:00:03] 2025-06-04 05:59:50,454 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 02:00:03] 2025-06-04 05:59:50,515 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 02:00:03] 2025-06-04 05:59:50,525 | INFO     | [data] copytool_out thread has finished
[2025-06-04 02:00:03] 2025-06-04 05:59:50,620 | INFO     | [data] control thread has finished
[2025-06-04 02:00:03] 2025-06-04 05:59:50,665 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 02:00:03] 2025-06-04 05:59:51,029 | INFO     | [job] control thread has finished
[2025-06-04 02:00:03] 2025-06-04 05:59:51,286 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:00:03] 2025-06-04 05:59:52,000 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 02:00:03] 2025-06-04 05:59:52,289 | INFO     | [job] queue monitor thread has finished
[2025-06-04 02:00:03] 2025-06-04 05:59:56,006 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 02:00:03] 2025-06-04 05:59:58,060 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140047713445696)>', '<ExcThread(monitor, started 140046954895104)>']
[2025-06-04 02:00:03] 2025-06-04 05:59:58,568 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 02:00:03] 2025-06-04 05:59:58,568 | INFO     | [monitor] control thread has ended
[2025-06-04 02:00:03] 2025-06-04 06:00:03,085 | INFO     | all workflow threads have been joined
[2025-06-04 02:00:03] 2025-06-04 06:00:03,085 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 02:00:03] 2025-06-04 06:00:03,086 | INFO     | traces error code: 0
[2025-06-04 02:00:03] 2025-06-04 06:00:03,086 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 02:00:03] 2025-06-04 06:00:03,245 [wrapper] ==== pilot stdout END ====
[2025-06-04 02:00:03] 2025-06-04 06:00:03,248 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 02:00:03] 2025-06-04 06:00:03,250 [wrapper] pilotpid: 1191585
[2025-06-04 02:00:03] 2025-06-04 06:00:03,252 [wrapper] Pilot exit status: 0
[2025-06-04 02:00:03] 2025-06-04 06:00:03,261 [wrapper] pandaids: 6678150879
[2025-06-04 02:00:03] 2025-06-04 06:00:03,318 [wrapper] cleanup supervisor_pilot 1422592 1191586
[2025-06-04 02:00:03] 2025-06-04 06:00:03,320 [wrapper] Test setup, not cleaning
[2025-06-04 02:00:03] 2025-06-04 06:00:03,322 [wrapper] apfmon messages muted
[2025-06-04 02:00:03] 2025-06-04 06:00:03,325 [wrapper] ==== wrapper stdout END ====
[2025-06-04 02:00:03] 2025-06-04 06:00:03,328 [wrapper] ==== wrapper stderr END ====
[2025-06-04 02:00:03]  *** Error codes and diagnostics ***
[2025-06-04 02:00:03]     "exeErrorCode": 0,
[2025-06-04 02:00:03]     "exeErrorDiag": "",
[2025-06-04 02:00:03]     "pilotErrorCode": 0,
[2025-06-04 02:00:03]     "pilotErrorDiag": "",
[2025-06-04 02:00:03]  *** Listing of results directory ***
[2025-06-04 02:00:03] total 392128
[2025-06-04 02:00:03] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 17:57 pilot3.tar.gz
[2025-06-04 02:00:03] -rwx------. 1 boincer umatlas     37140 Jun  3 18:16 runpilot2-wrapper.sh
[2025-06-04 02:00:03] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 18:16 queuedata.json
[2025-06-04 02:00:03] -rw-r--r--. 1 boincer umatlas       100 Jun  4 00:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 02:00:03] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 00:44 run_atlas
[2025-06-04 02:00:03] -rw-r--r--. 1 boincer umatlas       105 Jun  4 00:44 job.xml
[2025-06-04 02:00:03] -rw-r--r--. 2 boincer umatlas 217503567 Jun  4 00:44 EVNT.45006593._001875.pool.root.1
[2025-06-04 02:00:03] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 00:44 start_atlas.sh
[2025-06-04 02:00:03] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 00:44 shared
[2025-06-04 02:00:03] -rw-r--r--. 2 boincer umatlas    508873 Jun  4 00:44 input.tar.gz
[2025-06-04 02:00:03] -rw-r--r--. 1 boincer umatlas         0 Jun  4 00:44 boinc_lockfile
[2025-06-04 02:00:03] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 00:44 pandaJob.out
[2025-06-04 02:00:03] -rw-------. 1 boincer umatlas    986745 Jun  4 00:44 agis_schedconf.cvmfs.json
[2025-06-04 02:00:03] -rw-------. 1 boincer umatlas   1603667 Jun  4 00:44 agis_ddmendpoints.agis.ALL.json
[2025-06-04 02:00:03] drwx------. 4 boincer umatlas      4096 Jun  4 00:44 pilot3
[2025-06-04 02:00:03] -rw-r--r--. 1 boincer umatlas      6841 Jun  4 01:55 init_data.xml
[2025-06-04 02:00:03] -rw-------. 1 boincer umatlas        95 Jun  4 01:58 pilot_heartbeat.json
[2025-06-04 02:00:03] -rw-------. 1 boincer umatlas 178580077 Jun  4 01:59 HITS.45006595._046780.pool.root.1
[2025-06-04 02:00:03] -rw-r--r--. 1 boincer umatlas       529 Jun  4 01:59 boinc_task_state.xml
[2025-06-04 02:00:03] -rw-------. 1 boincer umatlas      1051 Jun  4 01:59 memory_monitor_summary.json
[2025-06-04 02:00:03] -rw-------. 1 boincer umatlas    374452 Jun  4 01:59 log.45006595._046780.job.log.tgz.1
[2025-06-04 02:00:03] -rw-------. 1 boincer umatlas      7722 Jun  4 01:59 heartbeat.json
[2025-06-04 02:00:03] -rw-r--r--. 1 boincer umatlas        27 Jun  4 01:59 wrapper_checkpoint.txt
[2025-06-04 02:00:03] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 01:59 boinc_mmap_file
[2025-06-04 02:00:03] -rw-------. 1 boincer umatlas      4662 Jun  4 02:00 pilotlog.txt
[2025-06-04 02:00:03] -rw-------. 1 boincer umatlas    437052 Jun  4 02:00 log.45006595._046780.job.log.1
[2025-06-04 02:00:03] -rw-------. 1 boincer umatlas       357 Jun  4 02:00 output.list
[2025-06-04 02:00:03] -rw-r--r--. 1 boincer umatlas       620 Jun  4 02:00 runtime_log
[2025-06-04 02:00:03] -rw-------. 1 boincer umatlas    829440 Jun  4 02:00 result.tar.gz
[2025-06-04 02:00:03] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 02:00 runtime_log.err
[2025-06-04 02:00:03] -rw-------. 1 boincer umatlas       653 Jun  4 02:00 3pmNDmI7og7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIKmKDmtiZUgn.diag
[2025-06-04 02:00:03] -rw-r--r--. 1 boincer umatlas     22581 Jun  4 02:00 stderr.txt
[2025-06-04 02:00:03] HITS file was successfully produced:
[2025-06-04 02:00:03] -rw-------. 1 boincer umatlas 178580077 Jun  4 01:59 shared/HITS.pool.root.1
[2025-06-04 02:00:03]  *** Contents of shared directory: ***
[2025-06-04 02:00:03] total 388136
[2025-06-04 02:00:03] -rw-r--r--. 2 boincer umatlas 217503567 Jun  4 00:44 ATLAS.root_0
[2025-06-04 02:00:03] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 00:44 start_atlas.sh
[2025-06-04 02:00:03] -rw-r--r--. 2 boincer umatlas    508873 Jun  4 00:44 input.tar.gz
[2025-06-04 02:00:03] -rw-------. 1 boincer umatlas 178580077 Jun  4 01:59 HITS.pool.root.1
[2025-06-04 02:00:03] -rw-------. 1 boincer umatlas    829440 Jun  4 02:00 result.tar.gz
02:00:04 (1184775): run_atlas exited; CPU time 32453.850943
02:00:04 (1184775): called boinc_finish(0)

</stderr_txt>
]]>

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