Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:41:55 (1426716): wrapper (7.7.26015): starting
11:41:55 (1426716): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 11:41:55] Arguments: --nthreads 12
[2025-06-04 11:41:55] Threads: 12
[2025-06-04 11:41:55] Checking for CVMFS
[2025-06-04 11:41:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:41:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:41:57] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:41:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:41:58] 2.12.7.0 9267 7361 169908 146775 0 397 32092576 46080001 51082 130560 0 52998658 99.946 10226697 29586 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-06-04 11:41:58] CVMFS is ok
[2025-06-04 11:41:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:41:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:41:58] Further information can be found at the LHC@home message board.
[2025-06-04 11:41:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:41:58] Checking for apptainer binary...
[2025-06-04 11:41:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:41:58] Running /usr/bin/apptainer --version
[2025-06-04 11:41:59] apptainer version 1.4.1-1.el9
[2025-06-04 11:44:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:44:23] mff2103.farm.particle.cz
[2025-06-04 11:44:23] apptainer works
[2025-06-04 11:44:23] Set ATHENA_PROC_NUMBER=12
[2025-06-04 11:44:23] Set ATHENA_CORE_NUMBER=12
[2025-06-04 11:44:24] Starting ATLAS job with PandaID=6677762465
[2025-06-04 11:44:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:08:08]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:08:08] 2025-06-04 10:56:43,372 | INFO     | 4249s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 13:08:08] 2025-06-04 10:56:44,787 | INFO     | monitor loop #316: job 0:6677762465 is in state 'finished'
[2025-06-04 13:08:08] 2025-06-04 10:56:44,787 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:08:08] 2025-06-04 10:56:47,293 | INFO     | monitor loop #317: job 0:6677762465 is in state 'finished'
[2025-06-04 13:08:08] 2025-06-04 10:56:47,294 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:08:08] 2025-06-04 10:56:49,799 | INFO     | monitor loop #318: job 0:6677762465 is in state 'finished'
[2025-06-04 13:08:08] 2025-06-04 10:56:49,800 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:08:08] 2025-06-04 10:56:52,304 | INFO     | monitor loop #319: job 0:6677762465 is in state 'finished'
[2025-06-04 13:08:08] 2025-06-04 10:56:52,305 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:08:08] 2025-06-04 10:56:54,811 | INFO     | monitor loop #320: job 0:6677762465 is in state 'finished'
[2025-06-04 13:08:08] 2025-06-04 10:56:54,812 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:08:08] 2025-06-04 10:56:57,317 | INFO     | monitor loop #321: job 0:6677762465 is in state 'finished'
[2025-06-04 13:08:08] 2025-06-04 10:56:57,317 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:08:08] 2025-06-04 10:56:59,822 | INFO     | monitor loop #322: job 0:6677762465 is in state 'finished'
[2025-06-04 13:08:08] 2025-06-04 10:56:59,823 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:08:08] 2025-06-04 10:57:02,327 | INFO     | monitor loop #323: job 0:6677762465 is in state 'finished'
[2025-06-04 13:08:08] 2025-06-04 10:57:02,329 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:08:08] 2025-06-04 10:57:03,493 | INFO     | PID=1460905 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 13:08:08] 2025-06-04 10:57:03,493 | INFO     | .. there are 99 such processes running
[2025-06-04 13:08:08] 2025-06-04 10:57:04,848 | INFO     | monitor loop #324: job 0:6677762465 is in state 'finished'
[2025-06-04 13:08:08] 2025-06-04 10:57:04,849 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:08:08] 2025-06-04 10:57:07,353 | INFO     | monitor loop #325: job 0:6677762465 is in state 'finished'
[2025-06-04 13:08:08] 2025-06-04 10:57:07,354 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:08:08] 2025-06-04 10:57:09,858 | INFO     | monitor loop #326: job 0:6677762465 is in state 'finished'
[2025-06-04 13:08:08] 2025-06-04 10:57:09,859 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:08:08] 2025-06-04 10:57:12,363 | INFO     | monitor loop #327: job 0:6677762465 is in state 'finished'
[2025-06-04 13:08:08] 2025-06-04 10:57:12,363 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:08:08] 2025-06-04 10:57:14,868 | INFO     | monitor loop #328: job 0:6677762465 is in state 'finished'
[2025-06-04 13:08:08] 2025-06-04 10:57:14,869 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:08:08] 2025-06-04 10:57:17,373 | INFO     | monitor loop #329: job 0:6677762465 is in state 'finished'
[2025-06-04 13:08:08] 2025-06-04 10:57:17,374 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:08:08] 2025-06-04 10:57:19,878 | INFO     | monitor loop #330: job 0:6677762465 is in state 'finished'
[2025-06-04 13:08:08] 2025-06-04 10:57:19,879 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:08:08] 2025-06-04 10:57:22,386 | INFO     | monitor loop #331: job 0:6677762465 is in state 'finished'
[2025-06-04 13:08:08] 2025-06-04 10:57:22,387 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:08:08] 2025-06-04 10:57:24,891 | INFO     | monitor loop #332: job 0:6677762465 is in state 'finished'
[2025-06-04 13:08:08] 2025-06-04 10:57:24,892 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:08:08] 2025-06-04 10:57:25,481 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 13:08:08] 2025-06-04 10:57:25,481 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6677762465/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:08:08] 2025-06-04 10:57:25,482 | INFO     | extracted standard info from prmon json
[2025-06-04 13:08:08] 2025-06-04 10:57:25,482 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 13:08:08] 2025-06-04 10:57:25,482 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 13:08:08] 2025-06-04 10:57:25,482 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 13:08:08] 2025-06-04 10:57:25,482 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:08:08] 2025-06-04 10:57:25,483 | INFO     | fitting pss+swap vs Time
[2025-06-04 13:08:08] 2025-06-04 10:57:25,484 | INFO     | sum of square deviations: 63666310.0
[2025-06-04 13:08:08] 2025-06-04 10:57:25,484 | INFO     | sum of deviations: 10012758197.0
[2025-06-04 13:08:08] 2025-06-04 10:57:25,484 | INFO     | mean x: 1749032661.0
[2025-06-04 13:08:08] 2025-06-04 10:57:25,484 | INFO     | mean y: 2612922.4576271186
[2025-06-04 13:08:08] 2025-06-04 10:57:25,484 | INFO     | -- intersect: -275066589505.7728
[2025-06-04 13:08:08] 2025-06-04 10:57:25,484 | INFO     | intersect: -275066589505.7728
[2025-06-04 13:08:08] 2025-06-04 10:57:25,484 | INFO     | chi2: 1.3488319449385986
[2025-06-04 13:08:08] 2025-06-04 10:57:25,484 | INFO     | -- intersect: -275066589505.7728
[2025-06-04 13:08:08] 2025-06-04 10:57:25,485 | INFO     | current memory leak: 157.27 B/s (using 59 data points, chi2=1.35)
[2025-06-04 13:08:08] 2025-06-04 10:57:25,485 | INFO     | ..............................
[2025-06-04 13:08:08] 2025-06-04 10:57:25,485 | INFO     | . Timing measurements:
[2025-06-04 13:08:08] 2025-06-04 10:57:25,485 | INFO     | . get job = 0 s
[2025-06-04 13:08:08] 2025-06-04 10:57:25,487 | INFO     | . initial setup = 7 s
[2025-06-04 13:08:08] 2025-06-04 10:57:25,487 | INFO     | . payload setup = 84 s
[2025-06-04 13:08:08] 2025-06-04 10:57:25,487 | INFO     | . stage-in = 0 s
[2025-06-04 13:08:08] 2025-06-04 10:57:25,487 | INFO     | . payload execution = 4043 s
[2025-06-04 13:08:08] 2025-06-04 10:57:25,488 | INFO     | . stage-out = 1 s
[2025-06-04 13:08:08] 2025-06-04 10:57:25,488 | INFO     | . log creation = 0 s
[2025-06-04 13:08:08] 2025-06-04 10:57:25,488 | INFO     | ..............................
[2025-06-04 13:08:08] 2025-06-04 10:57:25,633 | INFO     | 
[2025-06-04 13:08:08] 2025-06-04 10:57:25,634 | INFO     | job summary report
[2025-06-04 13:08:08] 2025-06-04 10:57:25,634 | INFO     | --------------------------------------------------
[2025-06-04 13:08:08] 2025-06-04 10:57:25,634 | INFO     | PanDA job id: 6677762465
[2025-06-04 13:08:08] 2025-06-04 10:57:25,634 | INFO     | task id: 45006595
[2025-06-04 13:08:08] 2025-06-04 10:57:25,634 | INFO     | errors: (none)
[2025-06-04 13:08:08] 2025-06-04 10:57:25,634 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:08:08] 2025-06-04 10:57:25,634 | INFO     | pilot state: finished 
[2025-06-04 13:08:08] 2025-06-04 10:57:25,634 | INFO     | transexitcode: 0
[2025-06-04 13:08:08] 2025-06-04 10:57:25,634 | INFO     | exeerrorcode: 0
[2025-06-04 13:08:08] 2025-06-04 10:57:25,634 | INFO     | exeerrordiag: 
[2025-06-04 13:08:08] 2025-06-04 10:57:25,634 | INFO     | exitcode: 0
[2025-06-04 13:08:08] 2025-06-04 10:57:25,634 | INFO     | exitmsg: OK
[2025-06-04 13:08:08] 2025-06-04 10:57:25,634 | INFO     | cpuconsumptiontime: 34118 s
[2025-06-04 13:08:08] 2025-06-04 10:57:25,634 | INFO     | nevents: 400
[2025-06-04 13:08:08] 2025-06-04 10:57:25,635 | INFO     | neventsw: 0
[2025-06-04 13:08:08] 2025-06-04 10:57:25,635 | INFO     | pid: 1507876
[2025-06-04 13:08:08] 2025-06-04 10:57:25,635 | INFO     | pgrp: 1507876
[2025-06-04 13:08:08] 2025-06-04 10:57:25,635 | INFO     | corecount: 12
[2025-06-04 13:08:08] 2025-06-04 10:57:25,635 | INFO     | event service: False
[2025-06-04 13:08:08] 2025-06-04 10:57:25,635 | INFO     | sizes: {0: 2405008, 1: 2405036, 2: 2405207, 13: 2405235, 23: 2405291, 34: 2405319, 45: 2405475, 46: 2405709, 56: 2405737, 4131: 2431510, 4132: 2431509, 4133: 24407
[2025-06-04 13:08:08] 2025-06-04 10:57:25,635 | INFO     | --------------------------------------------------
[2025-06-04 13:08:08] 2025-06-04 10:57:25,635 | INFO     | 
[2025-06-04 13:08:08] 2025-06-04 10:57:25,635 | INFO     | executing command: ls -lF /scratch/.boinc/slots/1
[2025-06-04 13:08:08] 2025-06-04 10:57:25,817 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:08:08] 2025-06-04 10:57:25,817 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:08:08] 2025-06-04 10:57:25,817 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:08:08] 2025-06-04 10:57:25,817 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:08:08] 2025-06-04 10:57:25,817 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:08:08] 2025-06-04 10:57:25,817 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:08:08] 2025-06-04 10:57:25,817 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:08:08] 2025-06-04 10:57:25,818 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:08:08] 2025-06-04 10:57:25,818 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:08:08] 2025-06-04 10:57:25,818 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:08:08] 2025-06-04 10:57:25,818 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:08:08] 2025-06-04 10:57:25,818 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:08:08] 2025-06-04 10:57:25,818 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:08:08] 2025-06-04 10:57:25,818 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:08:08] 2025-06-04 10:57:25,818 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:08:08] 2025-06-04 10:57:25,818 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:08:08] 2025-06-04 10:57:25,818 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:08:08] 2025-06-04 10:57:25,818 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:08:08] 2025-06-04 10:57:25,818 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:08:08] 2025-06-04 10:57:25,818 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:08:08] 2025-06-04 10:57:25,819 | INFO     | job 6677762465 has completed (purged errors)
[2025-06-04 13:08:08] 2025-06-04 10:57:25,819 | INFO     | overall cleanup function is called
[2025-06-04 13:08:08] 2025-06-04 10:57:26,663 | INFO     | PID=1460905 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 13:08:08] 2025-06-04 10:57:26,663 | INFO     | .. there are 99 such processes running
[2025-06-04 13:08:08] 2025-06-04 10:57:26,841 | INFO     | --- collectZombieJob: --- 10, [1507876]
[2025-06-04 13:08:08] 2025-06-04 10:57:26,842 | INFO     | zombie collector waiting for pid 1507876
[2025-06-04 13:08:08] 2025-06-04 10:57:26,842 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:08:08] 2025-06-04 10:57:26,842 | INFO     | collected zombie processes
[2025-06-04 13:08:08] 2025-06-04 10:57:26,842 | INFO     | will attempt to kill all subprocesses of pid=1507876
[2025-06-04 13:08:08] 2025-06-04 10:57:27,734 | INFO     | process IDs to be killed: [1507876] (in reverse order)
[2025-06-04 13:08:08] 2025-06-04 10:57:28,345 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:08:08] 2025-06-04 10:57:28,345 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:08:08] 2025-06-04 10:57:28,378 | INFO     | did not find any defunct processes belonging to 1507876
[2025-06-04 13:08:08] 2025-06-04 10:57:28,431 | INFO     | did not find any defunct processes belonging to 1507876
[2025-06-04 13:08:08] 2025-06-04 10:57:28,431 | INFO     | ready for new job
[2025-06-04 13:08:08] 2025-06-04 10:57:28,431 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:08:08] 2025-06-04 10:57:28,433 | INFO     | **************************************
[2025-06-04 13:08:08] 2025-06-04 10:57:28,433 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:08:08] 2025-06-04 10:57:28,433 | INFO     | **************************************
[2025-06-04 13:08:08] 2025-06-04 10:57:28,433 | INFO     | 
[2025-06-04 13:08:08] 2025-06-04 10:57:28,440 | INFO     | architecture information:
[2025-06-04 13:08:08] 2025-06-04 10:57:28,448 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:08:08] 2025-06-04 10:57:28,602 | INFO     | cat /etc/os-release:
[2025-06-04 13:08:08] NAME="CentOS Linux"
[2025-06-04 13:08:08] VERSION="7 (Core)"
[2025-06-04 13:08:08] ID="centos"
[2025-06-04 13:08:08] ID_LIKE="rhel fedora"
[2025-06-04 13:08:08] VERSION_ID="7"
[2025-06-04 13:08:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:08:08] ANSI_COLOR="0;31"
[2025-06-04 13:08:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:08:08] HOME_URL="https://www.centos.org/"
[2025-06-04 13:08:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:08:08] 
[2025-06-04 13:08:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:08:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:08:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:08:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:08:08] 
[2025-06-04 13:08:08] 2025-06-04 10:57:28,603 | INFO     | **************************************
[2025-06-04 13:08:08] 2025-06-04 10:57:29,106 | INFO     | executing command: df -mP /scratch/.boinc/slots/1
[2025-06-04 13:08:08] 2025-06-04 10:57:29,254 | INFO     | sufficient remaining disk space (1669658050560 B)
[2025-06-04 13:08:08] 2025-06-04 10:57:29,255 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:08:08] 2025-06-04 10:57:29,255 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:08:08] 2025-06-04 10:57:29,255 | INFO     | update_server=False
[2025-06-04 13:08:08] 2025-06-04 10:57:29,255 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:08:08] 2025-06-04 10:57:29,255 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 13:08:08] 2025-06-04 10:57:29,256 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:08:08] 2025-06-04 10:57:29,256 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:08:08] 2025-06-04 10:57:29,256 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:08:08] 2025-06-04 10:57:29,259 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:08:08] 2025-06-04 10:57:29,260 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:08:08] 2025-06-04 10:57:29,260 | INFO     | aborting loop
[2025-06-04 13:08:08] 2025-06-04 10:57:29,369 | INFO     | all job control threads have been joined
[2025-06-04 13:08:08] 2025-06-04 10:57:29,491 | INFO     | all data control threads have been joined
[2025-06-04 13:08:08] 2025-06-04 10:57:29,994 | INFO     | all payload control threads have been joined
[2025-06-04 13:08:08] 2025-06-04 10:57:30,265 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:08:08] 2025-06-04 10:57:30,269 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:08:08] 2025-06-04 10:57:30,375 | INFO     | [job] control thread has finished
[2025-06-04 13:08:08] 2025-06-04 10:57:30,407 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:08:08] 2025-06-04 10:57:30,497 | INFO     | [data] control thread has finished
[2025-06-04 13:08:08] 2025-06-04 10:57:30,597 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:08:08] 2025-06-04 10:57:30,647 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:08:08] 2025-06-04 10:57:30,694 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:08:08] 2025-06-04 10:57:31,000 | INFO     | [payload] control thread has finished
[2025-06-04 13:08:08] 2025-06-04 10:57:31,033 | INFO     | [job] validate thread has finished
[2025-06-04 13:08:08] 2025-06-04 10:57:31,053 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:08:08] 2025-06-04 10:57:31,266 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:08:08] 2025-06-04 10:57:31,449 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:08:08] 2025-06-04 10:57:31,494 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:08:08] 2025-06-04 10:57:31,653 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:08:08] 2025-06-04 10:57:31,917 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:08:08] 2025-06-04 10:57:35,929 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:08:08] 2025-06-04 10:57:40,154 | INFO     | job.realtimelogging is not enabled
[2025-06-04 13:08:08] 2025-06-04 10:57:41,160 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:08:08] 2025-06-04 10:57:41,872 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140454477076288)>', '<ExcThread(monitor, started 140453609465600)>']
[2025-06-04 13:08:08] 2025-06-04 10:57:42,334 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:08:08] 2025-06-04 10:57:42,335 | INFO     | [monitor] control thread has ended
[2025-06-04 13:08:08] 2025-06-04 10:57:46,898 | INFO     | all workflow threads have been joined
[2025-06-04 13:08:08] 2025-06-04 10:57:46,898 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:08:08] 2025-06-04 10:57:46,899 | INFO     | traces error code: 0
[2025-06-04 13:08:08] 2025-06-04 10:57:46,899 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:08:08] 2025-06-04 10:57:47,127 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:08:08] 2025-06-04 10:57:47,172 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:08:08] 2025-06-04 10:57:47,211 [wrapper] pilotpid: 1460905
[2025-06-04 13:08:08] 2025-06-04 10:57:47,252 [wrapper] Pilot exit status: 0
[2025-06-04 13:08:08] 2025-06-04 10:57:47,433 [wrapper] pandaids: 6677762465
[2025-06-04 13:08:08] 2025-06-04 10:57:48,038 [wrapper] cleanup supervisor_pilot 2011106 1460906
[2025-06-04 13:08:08] 2025-06-04 10:57:48,057 [wrapper] Test setup, not cleaning
[2025-06-04 13:08:08] 2025-06-04 10:57:48,097 [wrapper] apfmon messages muted
[2025-06-04 13:08:08] 2025-06-04 10:57:48,137 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:08:08] 2025-06-04 10:57:48,173 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:08:08]  *** Error codes and diagnostics ***
[2025-06-04 13:08:08]     "exeErrorCode": 0,
[2025-06-04 13:08:08]     "exeErrorDiag": "",
[2025-06-04 13:08:08]     "pilotErrorCode": 0,
[2025-06-04 13:08:08]     "pilotErrorDiag": "",
[2025-06-04 13:08:08]  *** Listing of results directory ***
[2025-06-04 13:08:08] total 392232
[2025-06-04 13:08:08] -rw-r--r-- 1 boinc boinc    495897 Jun  3 18:03 pilot3.tar.gz
[2025-06-04 13:08:08] -rw-r--r-- 1 boinc boinc      5111 Jun  3 18:14 queuedata.json
[2025-06-04 13:08:08] -rwx------ 1 boinc boinc     37140 Jun  3 18:14 runpilot2-wrapper.sh
[2025-06-04 13:08:08] -rw-r--r-- 1 boinc boinc       100 Jun  4 11:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:08:08] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 11:41 run_atlas
[2025-06-04 13:08:08] -rw-r--r-- 1 boinc boinc       105 Jun  4 11:41 job.xml
[2025-06-04 13:08:08] -rw-r--r-- 2 boinc boinc 212919559 Jun  4 11:41 EVNT.45006593._001543.pool.root.1
[2025-06-04 13:08:08] -rw-r--r-- 1 boinc boinc      6664 Jun  4 11:41 init_data.xml
[2025-06-04 13:08:08] -rw-r--r-- 2 boinc boinc     15093 Jun  4 11:41 start_atlas.sh
[2025-06-04 13:08:08] drwxrwx--x 2 boinc boinc      4096 Jun  4 11:41 shared
[2025-06-04 13:08:08] -rw-r--r-- 2 boinc boinc    508881 Jun  4 11:41 input.tar.gz
[2025-06-04 13:08:08] -rw-r--r-- 1 boinc boinc         0 Jun  4 11:41 boinc_lockfile
[2025-06-04 13:08:08] -rw-r--r-- 1 boinc boinc      2522 Jun  4 11:44 pandaJob.out
[2025-06-04 13:08:08] -rw------- 1 boinc boinc    986766 Jun  4 11:45 agis_schedconf.cvmfs.json
[2025-06-04 13:08:08] -rw------- 1 boinc boinc   1603667 Jun  4 11:45 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:08:08] drwx------ 4 boinc boinc      4096 Jun  4 11:46 pilot3
[2025-06-04 13:08:08] -rw------- 1 boinc boinc 183407691 Jun  4 12:55 HITS.45006595._038442.pool.root.1
[2025-06-04 13:08:08] -rw-r--r-- 1 boinc boinc       528 Jun  4 12:55 boinc_task_state.xml
[2025-06-04 13:08:08] -rw------- 1 boinc boinc      1023 Jun  4 12:56 memory_monitor_summary.json
[2025-06-04 13:08:08] -rw------- 1 boinc boinc    342503 Jun  4 12:56 log.45006595._038442.job.log.tgz.1
[2025-06-04 13:08:08] -rw------- 1 boinc boinc        95 Jun  4 12:57 pilot_heartbeat.json
[2025-06-04 13:08:08] -rw------- 1 boinc boinc      7694 Jun  4 12:57 heartbeat.json
[2025-06-04 13:08:08] -rw------- 1 boinc boinc      4551 Jun  4 12:57 pilotlog.txt
[2025-06-04 13:08:08] -rw------- 1 boinc boinc    399645 Jun  4 12:57 log.45006595._038442.job.log.1
[2025-06-04 13:08:08] -rw------- 1 boinc boinc       357 Jun  4 12:57 output.list
[2025-06-04 13:08:08] -rw-r--r-- 1 boinc boinc       620 Jun  4 12:57 runtime_log
[2025-06-04 13:08:08] -rw------- 1 boinc boinc    757760 Jun  4 12:57 result.tar.gz
[2025-06-04 13:08:08] -rw------- 1 boinc boinc       662 Jun  4 12:57 zenLDmOSjg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm90kKDmzfV1Wo.diag
[2025-06-04 13:08:08] -rw-r--r-- 1 boinc boinc      8720 Jun  4 12:57 runtime_log.err
[2025-06-04 13:08:08] -rw-r--r-- 1 boinc boinc        25 Jun  4 13:08 wrapper_checkpoint.txt
[2025-06-04 13:08:08] -rw-r--r-- 1 boinc boinc      8192 Jun  4 13:08 boinc_mmap_file
[2025-06-04 13:08:08] -rw-r--r-- 1 boinc boinc     22498 Jun  4 13:08 stderr.txt
[2025-06-04 13:08:08] HITS file was successfully produced:
[2025-06-04 13:08:08] -rw------- 1 boinc boinc 183407691 Jun  4 12:55 shared/HITS.pool.root.1
[2025-06-04 13:08:08]  *** Contents of shared directory: ***
[2025-06-04 13:08:08] total 388308
[2025-06-04 13:08:08] -rw-r--r-- 2 boinc boinc 212919559 Jun  4 11:41 ATLAS.root_0
[2025-06-04 13:08:08] -rw-r--r-- 2 boinc boinc     15093 Jun  4 11:41 start_atlas.sh
[2025-06-04 13:08:08] -rw-r--r-- 2 boinc boinc    508881 Jun  4 11:41 input.tar.gz
[2025-06-04 13:08:08] -rw------- 1 boinc boinc 183407691 Jun  4 12:55 HITS.pool.root.1
[2025-06-04 13:08:08] -rw------- 1 boinc boinc    757760 Jun  4 12:57 result.tar.gz
13:08:10 (1426716): run_atlas exited; CPU time 34361.503968
13:08:10 (1426716): called boinc_finish(0)

</stderr_txt>
]]>

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