Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
13:28:45 (1166338): wrapper (7.7.26015): starting
13:28:45 (1166338): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 13:28:45] Arguments: --nthreads 3
[2025-06-04 13:28:45] Threads: 3
[2025-06-04 13:28:45] Checking for CVMFS
[2025-06-04 13:28:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 13:28:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 13:28:45] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 13:28:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 13:28:45] 2.9.2.0 350883 2398 82920 146778 0 55 31450933 36864001 0 130560 0 2200639 99.992 598607 40457 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 13:28:45] CVMFS is ok
[2025-06-04 13:28:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 13:28:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 13:28:45] Further information can be found at the LHC@home message board.
[2025-06-04 13:28:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 13:28:45] Checking for apptainer binary...
[2025-06-04 13:28:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 13:28:45] Running /usr/bin/apptainer --version
[2025-06-04 13:28:45] apptainer version 1.3.6-6.1
[2025-06-04 13:28:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 13:28:45] thA335a
[2025-06-04 13:28:45] apptainer works
[2025-06-04 13:28:45] Set ATHENA_PROC_NUMBER=3
[2025-06-04 13:28:45] Set ATHENA_CORE_NUMBER=3
[2025-06-04 13:28:45] Starting ATLAS job with PandaID=6677977871
[2025-06-04 13:28:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:40:08]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:40:08]  mtime=0
[2025-06-04 14:40:08]  protocol_id=None
[2025-06-04 14:40:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 14:40:08]  replicas=None
[2025-06-04 14:40:08]  scope=mc23_13p6TeV
[2025-06-04 14:40:08]  status=None
[2025-06-04 14:40:08]  status_code=0
[2025-06-04 14:40:08]  storage_token=
[2025-06-04 14:40:08]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6677977871/log.45006595._043601.job.log.tgz.1
[2025-06-04 14:40:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9b/89/log.45006595._043601.job.log.tgz.1
[2025-06-04 14:40:08]  workdir=None
[2025-06-04 14:40:08] ]
[2025-06-04 14:40:08] 2025-06-04 12:39:44,336 | INFO     | transferring file log.45006595._043601.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6677977871/log.45006595._043601.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 14:40:08] 2025-06-04 12:39:44,336 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6677977871/log.45006595._043601.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0436
[2025-06-04 14:40:08] 2025-06-04 12:39:44,350 | INFO     | adding to output.list: log.45006595._043601.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9b/89/log.45006595._043601.job.log.tg
[2025-06-04 14:40:08] 2025-06-04 12:39:44,350 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 14:40:08] 2025-06-04 12:39:44,350 | INFO     | summary of transferred files:
[2025-06-04 14:40:08] 2025-06-04 12:39:44,350 | INFO     |  -- lfn=log.45006595._043601.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 14:40:08] 2025-06-04 12:39:44,350 | INFO     | stage-out finished correctly
[2025-06-04 14:40:08] 2025-06-04 12:39:44,381 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 14:40:08] 2025-06-04 12:39:46,607 | INFO     | job 6677977871 has state=finished
[2025-06-04 14:40:08] 2025-06-04 12:39:46,608 | INFO     | preparing for final server update for job 6677977871 in state='finished'
[2025-06-04 14:40:08] 2025-06-04 12:39:46,608 | INFO     | this job has now completed (state=finished)
[2025-06-04 14:40:08] 2025-06-04 12:39:46,608 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 14:40:08] 2025-06-04 12:39:46,608 | INFO     | log transfer has been attempted: DONE
[2025-06-04 14:40:08] 2025-06-04 12:39:46,608 | INFO     | job 6677977871 has finished - writing final server update
[2025-06-04 14:40:08] 2025-06-04 12:39:46,608 | INFO     | total number of processed events: 400 (read)
[2025-06-04 14:40:08] 2025-06-04 12:39:46,609 | INFO     | executing command: lscpu
[2025-06-04 14:40:08] 2025-06-04 12:39:46,626 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 14:40:08] 2025-06-04 12:39:49,031 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 14:40:08] 2025-06-04 12:39:49,032 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677977871/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:40:08] 2025-06-04 12:39:49,032 | INFO     | extracted standard info from prmon json
[2025-06-04 14:40:08] 2025-06-04 12:39:49,032 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 14:40:08] 2025-06-04 12:39:49,032 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:40:08] 2025-06-04 12:39:49,032 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:40:08] 2025-06-04 12:39:49,032 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:40:08] 2025-06-04 12:39:49,033 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:40:08] 2025-06-04 12:39:49,033 | INFO     | sum of square deviations: 77515872.0
[2025-06-04 14:40:08] 2025-06-04 12:39:49,033 | INFO     | sum of deviations: -5203128345.999997
[2025-06-04 14:40:08] 2025-06-04 12:39:49,033 | INFO     | mean x: 1749038747.0
[2025-06-04 14:40:08] 2025-06-04 12:39:49,033 | INFO     | mean y: 2391323.126984127
[2025-06-04 14:40:08] 2025-06-04 12:39:49,034 | INFO     | -- intersect: 117403806645.75946
[2025-06-04 14:40:08] 2025-06-04 12:39:49,034 | INFO     | intersect: 117403806645.75946
[2025-06-04 14:40:08] 2025-06-04 12:39:49,034 | INFO     | chi2: 0.115356105440206
[2025-06-04 14:40:08] 2025-06-04 12:39:49,034 | INFO     | -- intersect: 117403806645.75946
[2025-06-04 14:40:08] 2025-06-04 12:39:49,034 | INFO     | current memory leak: -67.12 B/s (using 63 data points, chi2=0.12)
[2025-06-04 14:40:08] 2025-06-04 12:39:49,034 | INFO     | ..............................
[2025-06-04 14:40:08] 2025-06-04 12:39:49,034 | INFO     | . Timing measurements:
[2025-06-04 14:40:08] 2025-06-04 12:39:49,034 | INFO     | . get job = 0 s
[2025-06-04 14:40:08] 2025-06-04 12:39:49,034 | INFO     | . initial setup = 1 s
[2025-06-04 14:40:08] 2025-06-04 12:39:49,034 | INFO     | . payload setup = 3 s
[2025-06-04 14:40:08] 2025-06-04 12:39:49,034 | INFO     | . stage-in = 0 s
[2025-06-04 14:40:08] 2025-06-04 12:39:49,034 | INFO     | . payload execution = 4232 s
[2025-06-04 14:40:08] 2025-06-04 12:39:49,034 | INFO     | . stage-out = 0 s
[2025-06-04 14:40:08] 2025-06-04 12:39:49,034 | INFO     | . log creation = 0 s
[2025-06-04 14:40:08] 2025-06-04 12:39:49,034 | INFO     | ..............................
[2025-06-04 14:40:08] 2025-06-04 12:39:49,406 | INFO     | 
[2025-06-04 14:40:08] 2025-06-04 12:39:49,406 | INFO     | job summary report
[2025-06-04 14:40:08] 2025-06-04 12:39:49,406 | INFO     | --------------------------------------------------
[2025-06-04 14:40:08] 2025-06-04 12:39:49,406 | INFO     | PanDA job id: 6677977871
[2025-06-04 14:40:08] 2025-06-04 12:39:49,406 | INFO     | task id: 45006595
[2025-06-04 14:40:08] 2025-06-04 12:39:49,406 | INFO     | errors: (none)
[2025-06-04 14:40:08] 2025-06-04 12:39:49,406 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:40:08] 2025-06-04 12:39:49,406 | INFO     | pilot state: finished 
[2025-06-04 14:40:08] 2025-06-04 12:39:49,406 | INFO     | transexitcode: 0
[2025-06-04 14:40:08] 2025-06-04 12:39:49,406 | INFO     | exeerrorcode: 0
[2025-06-04 14:40:08] 2025-06-04 12:39:49,406 | INFO     | exeerrordiag: 
[2025-06-04 14:40:08] 2025-06-04 12:39:49,406 | INFO     | exitcode: 0
[2025-06-04 14:40:08] 2025-06-04 12:39:49,406 | INFO     | exitmsg: OK
[2025-06-04 14:40:08] 2025-06-04 12:39:49,406 | INFO     | cpuconsumptiontime: 12059 s
[2025-06-04 14:40:08] 2025-06-04 12:39:49,406 | INFO     | nevents: 400
[2025-06-04 14:40:08] 2025-06-04 12:39:49,406 | INFO     | neventsw: 0
[2025-06-04 14:40:08] 2025-06-04 12:39:49,406 | INFO     | pid: 1176462
[2025-06-04 14:40:08] 2025-06-04 12:39:49,406 | INFO     | pgrp: 1176462
[2025-06-04 14:40:08] 2025-06-04 12:39:49,406 | INFO     | corecount: 3
[2025-06-04 14:40:08] 2025-06-04 12:39:49,406 | INFO     | event service: False
[2025-06-04 14:40:08] 2025-06-04 12:39:49,406 | INFO     | sizes: {0: 2405187, 3: 2405393, 11: 2405421, 4239: 2431442, 4240: 2440444, 4245: 2440558}
[2025-06-04 14:40:08] 2025-06-04 12:39:49,406 | INFO     | --------------------------------------------------
[2025-06-04 14:40:08] 2025-06-04 12:39:49,407 | INFO     | 
[2025-06-04 14:40:08] 2025-06-04 12:39:49,407 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 14:40:08] 2025-06-04 12:39:49,423 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:40:08] 2025-06-04 12:39:49,423 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:40:08] 2025-06-04 12:39:49,423 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:40:08] 2025-06-04 12:39:49,423 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:40:08] 2025-06-04 12:39:49,423 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:40:08] 2025-06-04 12:39:49,423 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:40:08] 2025-06-04 12:39:49,423 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:40:08] 2025-06-04 12:39:49,423 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:40:08] 2025-06-04 12:39:49,423 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:40:08] 2025-06-04 12:39:49,423 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:40:08] 2025-06-04 12:39:49,424 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:40:08] 2025-06-04 12:39:49,424 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:40:08] 2025-06-04 12:39:49,424 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:40:08] 2025-06-04 12:39:49,424 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:40:08] 2025-06-04 12:39:49,424 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:40:08] 2025-06-04 12:39:49,424 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:40:08] 2025-06-04 12:39:49,424 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:40:08] 2025-06-04 12:39:49,424 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:40:08] 2025-06-04 12:39:49,424 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:40:08] 2025-06-04 12:39:49,424 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:40:08] 2025-06-04 12:39:49,424 | INFO     | job 6677977871 has completed (purged errors)
[2025-06-04 14:40:08] 2025-06-04 12:39:49,424 | INFO     | overall cleanup function is called
[2025-06-04 14:40:08] 2025-06-04 12:39:49,808 | WARNING  | process 1176462 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 14:40:08] 2025-06-04 12:39:49,837 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:40:08] 2025-06-04 12:39:49,837 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:40:08] 2025-06-04 12:39:49,837 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-6677977871/payload.stdout) since it has not been created yet
[2025-06-04 14:40:08] 2025-06-04 12:39:49,837 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 14:40:08] 2025-06-04 12:39:49,848 | INFO     | sufficient remaining disk space (368839753728 B)
[2025-06-04 14:40:08] 2025-06-04 12:39:49,848 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-06-04 14:40:08] 2025-06-04 12:39:49,848 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6677977871/HITS.45006595._043601.pool.root.1 since it does not exist
[2025-06-04 14:40:08] 2025-06-04 12:39:49,885 | INFO     | number of running child processes to parent process 1176462: 1
[2025-06-04 14:40:08] 2025-06-04 12:39:49,885 | INFO     | maximum number of monitored processes: 6
[2025-06-04 14:40:08] 2025-06-04 12:39:49,885 | INFO     | aborting job monitoring since job object (job id=6677977871) has expired
[2025-06-04 14:40:08] 2025-06-04 12:39:50,431 | INFO     | --- collectZombieJob: --- 10, [1176462]
[2025-06-04 14:40:08] 2025-06-04 12:39:50,431 | INFO     | zombie collector waiting for pid 1176462
[2025-06-04 14:40:08] 2025-06-04 12:39:50,431 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:40:08] 2025-06-04 12:39:50,431 | INFO     | collected zombie processes
[2025-06-04 14:40:08] 2025-06-04 12:39:50,431 | INFO     | will attempt to kill all subprocesses of pid=1176462
[2025-06-04 14:40:08] 2025-06-04 12:39:50,471 | INFO     | process IDs to be killed: [1176462] (in reverse order)
[2025-06-04 14:40:08] 2025-06-04 12:39:50,496 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:40:08] 2025-06-04 12:39:50,496 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:40:08] 2025-06-04 12:39:50,497 | INFO     | did not find any defunct processes belonging to 1176462
[2025-06-04 14:40:08] 2025-06-04 12:39:50,498 | INFO     | did not find any defunct processes belonging to 1176462
[2025-06-04 14:40:08] 2025-06-04 12:39:50,498 | INFO     | ready for new job
[2025-06-04 14:40:08] 2025-06-04 12:39:50,498 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:40:08] 2025-06-04 12:39:50,499 | INFO     | **************************************
[2025-06-04 14:40:08] 2025-06-04 12:39:50,499 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:40:08] 2025-06-04 12:39:50,499 | INFO     | **************************************
[2025-06-04 14:40:08] 2025-06-04 12:39:50,499 | INFO     | 
[2025-06-04 14:40:08] 2025-06-04 12:39:50,499 | INFO     | architecture information:
[2025-06-04 14:40:08] 2025-06-04 12:39:50,499 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:40:08] 2025-06-04 12:39:50,509 | INFO     | cat /etc/os-release:
[2025-06-04 14:40:08] NAME="CentOS Linux"
[2025-06-04 14:40:08] VERSION="7 (Core)"
[2025-06-04 14:40:08] ID="centos"
[2025-06-04 14:40:08] ID_LIKE="rhel fedora"
[2025-06-04 14:40:08] VERSION_ID="7"
[2025-06-04 14:40:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:40:08] ANSI_COLOR="0;31"
[2025-06-04 14:40:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:40:08] HOME_URL="https://www.centos.org/"
[2025-06-04 14:40:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:40:08] 
[2025-06-04 14:40:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:40:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:40:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:40:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:40:08] 
[2025-06-04 14:40:08] 2025-06-04 12:39:50,509 | INFO     | **************************************
[2025-06-04 14:40:08] 2025-06-04 12:39:51,012 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 14:40:08] 2025-06-04 12:39:51,026 | INFO     | sufficient remaining disk space (368840802304 B)
[2025-06-04 14:40:08] 2025-06-04 12:39:51,026 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:40:08] 2025-06-04 12:39:51,026 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:40:08] 2025-06-04 12:39:51,026 | INFO     | update_server=False
[2025-06-04 14:40:08] 2025-06-04 12:39:51,026 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:40:08] 2025-06-04 12:39:51,026 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:40:08] 2025-06-04 12:39:51,026 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:40:08] 2025-06-04 12:39:51,026 | INFO     | aborting loop
[2025-06-04 14:40:08] 2025-06-04 12:39:51,026 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:40:08] 2025-06-04 12:39:51,322 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:40:08] 2025-06-04 12:39:51,322 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:40:08] 2025-06-04 12:39:51,322 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:40:08] 2025-06-04 12:39:51,421 | INFO     | all data control threads have been joined
[2025-06-04 14:40:08] 2025-06-04 12:39:51,782 | INFO     | all payload control threads have been joined
[2025-06-04 14:40:08] 2025-06-04 12:39:52,032 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:40:08] 2025-06-04 12:39:52,032 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:40:08] 2025-06-04 12:39:52,032 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:40:08] 2025-06-04 12:39:52,078 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:40:08] 2025-06-04 12:39:52,394 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:40:08] 2025-06-04 12:39:52,427 | INFO     | [data] control thread has finished
[2025-06-04 14:40:08] 2025-06-04 12:39:52,533 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:40:08] 2025-06-04 12:39:52,542 | INFO     | all job control threads have been joined
[2025-06-04 14:40:08] 2025-06-04 12:39:52,787 | INFO     | [payload] control thread has finished
[2025-06-04 14:40:08] 2025-06-04 12:39:53,067 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:40:08] 2025-06-04 12:39:53,103 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:40:08] 2025-06-04 12:39:53,432 | INFO     | [job] validate thread has finished
[2025-06-04 14:40:08] 2025-06-04 12:39:53,500 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:40:08] 2025-06-04 12:39:53,514 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:40:08] 2025-06-04 12:39:53,547 | INFO     | [job] control thread has finished
[2025-06-04 14:40:08] 2025-06-04 12:39:54,400 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:40:08] 2025-06-04 12:39:55,033 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:40:08] 2025-06-04 12:40:01,474 | INFO     | job.realtimelogging is not enabled
[2025-06-04 14:40:08] 2025-06-04 12:40:02,480 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:40:08] 2025-06-04 12:40:03,612 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140242548959040)>', '<ExcThread(monitor, started 140242174580480)>']
[2025-06-04 14:40:08] 2025-06-04 12:40:04,388 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:40:08] 2025-06-04 12:40:04,389 | INFO     | [monitor] control thread has ended
[2025-06-04 14:40:08] 2025-06-04 12:40:08,615 | INFO     | all workflow threads have been joined
[2025-06-04 14:40:08] 2025-06-04 12:40:08,615 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:40:08] 2025-06-04 12:40:08,616 | INFO     | traces error code: 0
[2025-06-04 14:40:08] 2025-06-04 12:40:08,616 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:40:08] 2025-06-04 12:40:08,664 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:40:08] 2025-06-04 12:40:08,667 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:40:08] 2025-06-04 12:40:08,670 [wrapper] pilotpid: 1169966
[2025-06-04 14:40:08] 2025-06-04 12:40:08,672 [wrapper] Pilot exit status: 0
[2025-06-04 14:40:08] 2025-06-04 12:40:08,680 [wrapper] pandaids: 6677977871
[2025-06-04 14:40:08] 2025-06-04 12:40:08,697 [wrapper] cleanup supervisor_pilot 1186278 1169967
[2025-06-04 14:40:08] 2025-06-04 12:40:08,699 [wrapper] Test setup, not cleaning
[2025-06-04 14:40:08] 2025-06-04 12:40:08,702 [wrapper] apfmon messages muted
[2025-06-04 14:40:08] 2025-06-04 12:40:08,705 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:40:08] 2025-06-04 12:40:08,707 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:40:08]  *** Error codes and diagnostics ***
[2025-06-04 14:40:08]     "exeErrorCode": 0,
[2025-06-04 14:40:08]     "exeErrorDiag": "",
[2025-06-04 14:40:08]     "pilotErrorCode": 0,
[2025-06-04 14:40:08]     "pilotErrorDiag": "",
[2025-06-04 14:40:08]  *** Listing of results directory ***
[2025-06-04 14:40:08] total 388176
[2025-06-04 14:40:08] -rw-r--r-- 1 boinc boinc    495897 Jun  3 20:57 pilot3.tar.gz
[2025-06-04 14:40:08] -rw-r--r-- 1 boinc boinc      5111 Jun  3 21:16 queuedata.json
[2025-06-04 14:40:08] -rwx------ 1 boinc boinc     37140 Jun  3 21:18 runpilot2-wrapper.sh
[2025-06-04 14:40:08] -rw-r--r-- 1 boinc boinc       100 Jun  4 13:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:40:08] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 13:28 run_atlas
[2025-06-04 14:40:08] -rw-r--r-- 1 boinc boinc       105 Jun  4 13:28 job.xml
[2025-06-04 14:40:08] -rw-r--r-- 2 boinc boinc 216037154 Jun  4 13:28 EVNT.45006593._001748.pool.root.1
[2025-06-04 14:40:08] -rw-r--r-- 1 boinc boinc      6930 Jun  4 13:28 init_data.xml
[2025-06-04 14:40:08] drwxrwx--x 2 boinc boinc      4096 Jun  4 13:28 shared
[2025-06-04 14:40:08] -rw-r--r-- 2 boinc boinc    508882 Jun  4 13:28 input.tar.gz
[2025-06-04 14:40:08] -rw-r--r-- 2 boinc boinc     15093 Jun  4 13:28 start_atlas.sh
[2025-06-04 14:40:08] -rw-r--r-- 1 boinc boinc         0 Jun  4 13:28 boinc_lockfile
[2025-06-04 14:40:08] -rw-r--r-- 1 boinc boinc      2525 Jun  4 13:28 pandaJob.out
[2025-06-04 14:40:08] -rw------- 1 boinc boinc    986812 Jun  4 13:28 agis_schedconf.cvmfs.json
[2025-06-04 14:40:08] -rw------- 1 boinc boinc   1603667 Jun  4 13:28 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:40:08] drwx------ 4 boinc boinc      4096 Jun  4 13:28 pilot3
[2025-06-04 14:40:08] -rw------- 1 boinc boinc        95 Jun  4 14:39 pilot_heartbeat.json
[2025-06-04 14:40:08] -rw------- 1 boinc boinc 176345451 Jun  4 14:39 HITS.45006595._043601.pool.root.1
[2025-06-04 14:40:08] -rw-r--r-- 1 boinc boinc       529 Jun  4 14:39 boinc_task_state.xml
[2025-06-04 14:40:08] -rw------- 1 boinc boinc      1017 Jun  4 14:39 memory_monitor_summary.json
[2025-06-04 14:40:08] -rw------- 1 boinc boinc    215038 Jun  4 14:39 log.45006595._043601.job.log.tgz.1
[2025-06-04 14:40:08] -rw------- 1 boinc boinc      7644 Jun  4 14:39 heartbeat.json
[2025-06-04 14:40:08] -rw-r--r-- 1 boinc boinc      8192 Jun  4 14:39 boinc_mmap_file
[2025-06-04 14:40:08] -rw-r--r-- 1 boinc boinc        27 Jun  4 14:39 wrapper_checkpoint.txt
[2025-06-04 14:40:08] -rw------- 1 boinc boinc      4429 Jun  4 14:40 pilotlog.txt
[2025-06-04 14:40:08] -rw------- 1 boinc boinc    421606 Jun  4 14:40 log.45006595._043601.job.log.1
[2025-06-04 14:40:08] -rw------- 1 boinc boinc       357 Jun  4 14:40 output.list
[2025-06-04 14:40:08] -rw-r--r-- 1 boinc boinc       620 Jun  4 14:40 runtime_log
[2025-06-04 14:40:08] -rw------- 1 boinc boinc    655360 Jun  4 14:40 result.tar.gz
[2025-06-04 14:40:08] -rw------- 1 boinc boinc       659 Jun  4 14:40 wcONDmSKmg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmBkZKDmsVZMwn.diag
[2025-06-04 14:40:08] -rw-r--r-- 1 boinc boinc      8738 Jun  4 14:40 runtime_log.err
[2025-06-04 14:40:08] -rw-r--r-- 1 boinc boinc     21735 Jun  4 14:40 stderr.txt
[2025-06-04 14:40:08] HITS file was successfully produced:
[2025-06-04 14:40:08] -rw------- 1 boinc boinc 176345451 Jun  4 14:39 shared/HITS.pool.root.1
[2025-06-04 14:40:08]  *** Contents of shared directory: ***
[2025-06-04 14:40:08] total 384356
[2025-06-04 14:40:08] -rw-r--r-- 2 boinc boinc 216037154 Jun  4 13:28 ATLAS.root_0
[2025-06-04 14:40:08] -rw-r--r-- 2 boinc boinc    508882 Jun  4 13:28 input.tar.gz
[2025-06-04 14:40:08] -rw-r--r-- 2 boinc boinc     15093 Jun  4 13:28 start_atlas.sh
[2025-06-04 14:40:08] -rw------- 1 boinc boinc 176345451 Jun  4 14:39 HITS.pool.root.1
[2025-06-04 14:40:08] -rw------- 1 boinc boinc    655360 Jun  4 14:40 result.tar.gz
14:40:10 (1166338): run_atlas exited; CPU time 12070.204706
14:40:10 (1166338): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN