Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:57:26 (1611337): wrapper (7.7.26015): starting
11:57:26 (1611337): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 11:57:26] Arguments: --nthreads 12
[2025-06-04 11:57:26] Threads: 12
[2025-06-04 11:57:26] Checking for CVMFS
[2025-06-04 11:57:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:57:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:57:27] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:57:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:57:28] 2.12.7.0 9267 7376 173116 146775 0 397 32107714 46080001 48717 130560 0 53138649 99.946 10226699 29586 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-06-04 11:57:28] CVMFS is ok
[2025-06-04 11:57:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:57:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:57:29] Further information can be found at the LHC@home message board.
[2025-06-04 11:57:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:57:29] Checking for apptainer binary...
[2025-06-04 11:57:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:57:29] Running /usr/bin/apptainer --version
[2025-06-04 11:57:29] apptainer version 1.4.1-1.el9
[2025-06-04 11:57:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:57:29] mff2103.farm.particle.cz
[2025-06-04 11:57:29] apptainer works
[2025-06-04 11:57:29] Set ATHENA_PROC_NUMBER=12
[2025-06-04 11:57:29] Set ATHENA_CORE_NUMBER=12
[2025-06-04 11:57:30] Starting ATLAS job with PandaID=6678150133
[2025-06-04 11:57:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:25:58]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:25:58] 2025-06-04 11:07:55,077 | INFO     | log transfer has been attempted: DONE
[2025-06-04 13:25:58] 2025-06-04 11:07:55,077 | INFO     | job 6678150133 has finished - writing final server update
[2025-06-04 13:25:58] 2025-06-04 11:07:55,078 | INFO     | total number of processed events: 400 (read)
[2025-06-04 13:25:58] 2025-06-04 11:07:55,098 | INFO     | executing command: lscpu
[2025-06-04 13:25:58] 2025-06-04 11:07:55,337 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 13:25:58] 2025-06-04 11:07:57,044 | WARNING  | process 1673765 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 13:25:58] 2025-06-04 11:07:57,045 | INFO     | using path: /scratch/.boinc/slots/7/PanDA_Pilot-6678150133/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:25:58] 2025-06-04 11:07:57,907 | INFO     | number of running child processes to parent process 1673765: 1
[2025-06-04 13:25:58] 2025-06-04 11:07:57,907 | INFO     | maximum number of monitored processes: 8
[2025-06-04 13:25:58] 2025-06-04 11:08:00,412 | INFO     | monitor loop #303: job 0:6678150133 is in state 'finished'
[2025-06-04 13:25:58] 2025-06-04 11:08:00,413 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:25:58] 2025-06-04 11:08:02,917 | INFO     | monitor loop #304: job 0:6678150133 is in state 'finished'
[2025-06-04 13:25:58] 2025-06-04 11:08:02,918 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:25:58] 2025-06-04 11:08:05,422 | INFO     | monitor loop #305: job 0:6678150133 is in state 'finished'
[2025-06-04 13:25:58] 2025-06-04 11:08:05,423 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:25:58] 2025-06-04 11:08:07,927 | INFO     | monitor loop #306: job 0:6678150133 is in state 'finished'
[2025-06-04 13:25:58] 2025-06-04 11:08:07,929 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:25:58] 2025-06-04 11:08:10,437 | INFO     | monitor loop #307: job 0:6678150133 is in state 'finished'
[2025-06-04 13:25:58] 2025-06-04 11:08:10,437 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:25:58] 2025-06-04 11:08:10,882 | INFO     | PID=1630709 has CPU usage=15.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 13:25:58] 2025-06-04 11:08:10,882 | INFO     | .. there are 97 such processes running
[2025-06-04 13:25:58] 2025-06-04 11:08:12,942 | INFO     | monitor loop #308: job 0:6678150133 is in state 'finished'
[2025-06-04 13:25:58] 2025-06-04 11:08:12,943 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:25:58] 2025-06-04 11:08:15,447 | INFO     | monitor loop #309: job 0:6678150133 is in state 'finished'
[2025-06-04 13:25:58] 2025-06-04 11:08:15,448 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:25:58] 2025-06-04 11:08:17,952 | INFO     | monitor loop #310: job 0:6678150133 is in state 'finished'
[2025-06-04 13:25:58] 2025-06-04 11:08:17,953 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:25:58] 2025-06-04 11:08:20,457 | INFO     | monitor loop #311: job 0:6678150133 is in state 'finished'
[2025-06-04 13:25:58] 2025-06-04 11:08:20,458 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:25:58] 2025-06-04 11:08:22,962 | INFO     | monitor loop #312: job 0:6678150133 is in state 'finished'
[2025-06-04 13:25:58] 2025-06-04 11:08:22,963 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:25:58] 2025-06-04 11:08:25,469 | INFO     | monitor loop #313: job 0:6678150133 is in state 'finished'
[2025-06-04 13:25:58] 2025-06-04 11:08:25,470 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:25:58] 2025-06-04 11:08:27,982 | INFO     | monitor loop #314: job 0:6678150133 is in state 'finished'
[2025-06-04 13:25:58] 2025-06-04 11:08:27,983 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:25:58] 2025-06-04 11:08:30,490 | INFO     | monitor loop #315: job 0:6678150133 is in state 'finished'
[2025-06-04 13:25:58] 2025-06-04 11:08:30,490 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:25:58] 2025-06-04 11:08:32,628 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 13:25:58] 2025-06-04 11:08:32,628 | INFO     | using path: /scratch/.boinc/slots/7/PanDA_Pilot-6678150133/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:25:58] 2025-06-04 11:08:32,629 | INFO     | extracted standard info from prmon json
[2025-06-04 13:25:58] 2025-06-04 11:08:32,629 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 13:25:58] 2025-06-04 11:08:32,629 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 13:25:58] 2025-06-04 11:08:32,629 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 13:25:58] 2025-06-04 11:08:32,629 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:25:58] 2025-06-04 11:08:32,631 | INFO     | fitting pss+swap vs Time
[2025-06-04 13:25:58] 2025-06-04 11:08:32,631 | INFO     | sum of square deviations: 60482994.5
[2025-06-04 13:25:58] 2025-06-04 11:08:32,631 | INFO     | sum of deviations: 15789670446.500004
[2025-06-04 13:25:58] 2025-06-04 11:08:32,635 | INFO     | mean x: 1749033387.5
[2025-06-04 13:25:58] 2025-06-04 11:08:32,636 | INFO     | mean y: 2553664.3620689656
[2025-06-04 13:25:58] 2025-06-04 11:08:32,636 | INFO     | -- intersect: -456599521296.5683
[2025-06-04 13:25:58] 2025-06-04 11:08:32,636 | INFO     | intersect: -456599521296.5683
[2025-06-04 13:25:58] 2025-06-04 11:08:32,636 | INFO     | chi2: 2.4082426982619776
[2025-06-04 13:25:58] 2025-06-04 11:08:32,636 | INFO     | -- intersect: -456599521296.5683
[2025-06-04 13:25:58] 2025-06-04 11:08:32,636 | INFO     | current memory leak: 261.06 B/s (using 58 data points, chi2=2.41)
[2025-06-04 13:25:58] 2025-06-04 11:08:32,637 | INFO     | ..............................
[2025-06-04 13:25:58] 2025-06-04 11:08:32,637 | INFO     | . Timing measurements:
[2025-06-04 13:25:58] 2025-06-04 11:08:32,637 | INFO     | . get job = 0 s
[2025-06-04 13:25:58] 2025-06-04 11:08:32,637 | INFO     | . initial setup = 4 s
[2025-06-04 13:25:58] 2025-06-04 11:08:32,637 | INFO     | . payload setup = 77 s
[2025-06-04 13:25:58] 2025-06-04 11:08:32,637 | INFO     | . stage-in = 0 s
[2025-06-04 13:25:58] 2025-06-04 11:08:32,637 | INFO     | . payload execution = 3964 s
[2025-06-04 13:25:58] 2025-06-04 11:08:32,637 | INFO     | . stage-out = 1 s
[2025-06-04 13:25:58] 2025-06-04 11:08:32,637 | INFO     | . log creation = 0 s
[2025-06-04 13:25:58] 2025-06-04 11:08:32,637 | INFO     | ..............................
[2025-06-04 13:25:58] 2025-06-04 11:08:33,189 | INFO     | 
[2025-06-04 13:25:58] 2025-06-04 11:08:33,190 | INFO     | job summary report
[2025-06-04 13:25:58] 2025-06-04 11:08:33,190 | INFO     | --------------------------------------------------
[2025-06-04 13:25:58] 2025-06-04 11:08:33,190 | INFO     | PanDA job id: 6678150133
[2025-06-04 13:25:58] 2025-06-04 11:08:33,190 | INFO     | task id: 45006595
[2025-06-04 13:25:58] 2025-06-04 11:08:33,190 | INFO     | errors: (none)
[2025-06-04 13:25:58] 2025-06-04 11:08:33,190 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:25:58] 2025-06-04 11:08:33,190 | INFO     | pilot state: finished 
[2025-06-04 13:25:58] 2025-06-04 11:08:33,190 | INFO     | transexitcode: 0
[2025-06-04 13:25:58] 2025-06-04 11:08:33,190 | INFO     | exeerrorcode: 0
[2025-06-04 13:25:58] 2025-06-04 11:08:33,190 | INFO     | exeerrordiag: 
[2025-06-04 13:25:58] 2025-06-04 11:08:33,190 | INFO     | exitcode: 0
[2025-06-04 13:25:58] 2025-06-04 11:08:33,190 | INFO     | exitmsg: OK
[2025-06-04 13:25:58] 2025-06-04 11:08:33,191 | INFO     | cpuconsumptiontime: 34888 s
[2025-06-04 13:25:58] 2025-06-04 11:08:33,191 | INFO     | nevents: 400
[2025-06-04 13:25:58] 2025-06-04 11:08:33,191 | INFO     | neventsw: 0
[2025-06-04 13:25:58] 2025-06-04 11:08:33,191 | INFO     | pid: 1673765
[2025-06-04 13:25:58] 2025-06-04 11:08:33,191 | INFO     | pgrp: 1673765
[2025-06-04 13:25:58] 2025-06-04 11:08:33,191 | INFO     | corecount: 12
[2025-06-04 13:25:58] 2025-06-04 11:08:33,191 | INFO     | event service: False
[2025-06-04 13:25:58] 2025-06-04 11:08:33,191 | INFO     | sizes: {0: 2404907, 1: 2405162, 2: 2405162, 12: 2405190, 23: 2405218, 34: 2405246, 43: 2405608, 44: 2405636, 4044: 2431408, 4045: 2431407, 4047: 2440742, 4086: 244
[2025-06-04 13:25:58] 2025-06-04 11:08:33,191 | INFO     | --------------------------------------------------
[2025-06-04 13:25:58] 2025-06-04 11:08:33,191 | INFO     | 
[2025-06-04 13:25:58] 2025-06-04 11:08:33,191 | INFO     | executing command: ls -lF /scratch/.boinc/slots/7
[2025-06-04 13:25:58] 2025-06-04 11:08:33,321 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:25:58] 2025-06-04 11:08:33,321 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:25:58] 2025-06-04 11:08:33,321 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:25:58] 2025-06-04 11:08:33,321 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:25:58] 2025-06-04 11:08:33,321 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:25:58] 2025-06-04 11:08:33,322 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:25:58] 2025-06-04 11:08:33,322 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:25:58] 2025-06-04 11:08:33,322 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:25:58] 2025-06-04 11:08:33,322 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:25:58] 2025-06-04 11:08:33,322 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:25:58] 2025-06-04 11:08:33,322 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:25:58] 2025-06-04 11:08:33,322 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:25:58] 2025-06-04 11:08:33,322 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:25:58] 2025-06-04 11:08:33,322 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:25:58] 2025-06-04 11:08:33,322 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:25:58] 2025-06-04 11:08:33,322 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:25:58] 2025-06-04 11:08:33,322 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:25:58] 2025-06-04 11:08:33,322 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:25:58] 2025-06-04 11:08:33,323 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:25:58] 2025-06-04 11:08:33,323 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:25:58] 2025-06-04 11:08:33,323 | INFO     | job 6678150133 has completed (purged errors)
[2025-06-04 13:25:58] 2025-06-04 11:08:33,323 | INFO     | overall cleanup function is called
[2025-06-04 13:25:58] 2025-06-04 11:08:34,109 | INFO     | PID=1630709 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 13:25:58] 2025-06-04 11:08:34,109 | INFO     | .. there are 97 such processes running
[2025-06-04 13:25:58] 2025-06-04 11:08:34,361 | INFO     | --- collectZombieJob: --- 10, [1673765]
[2025-06-04 13:25:58] 2025-06-04 11:08:34,362 | INFO     | zombie collector waiting for pid 1673765
[2025-06-04 13:25:58] 2025-06-04 11:08:34,362 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:25:58] 2025-06-04 11:08:34,362 | INFO     | collected zombie processes
[2025-06-04 13:25:58] 2025-06-04 11:08:34,362 | INFO     | will attempt to kill all subprocesses of pid=1673765
[2025-06-04 13:25:58] 2025-06-04 11:08:35,325 | INFO     | process IDs to be killed: [1673765] (in reverse order)
[2025-06-04 13:25:58] 2025-06-04 11:08:35,746 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:25:58] 2025-06-04 11:08:35,749 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:25:58] 2025-06-04 11:08:35,796 | INFO     | did not find any defunct processes belonging to 1673765
[2025-06-04 13:25:58] 2025-06-04 11:08:35,852 | INFO     | did not find any defunct processes belonging to 1673765
[2025-06-04 13:25:58] 2025-06-04 11:08:35,852 | INFO     | ready for new job
[2025-06-04 13:25:58] 2025-06-04 11:08:35,853 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:25:58] 2025-06-04 11:08:35,854 | INFO     | **************************************
[2025-06-04 13:25:58] 2025-06-04 11:08:35,855 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:25:58] 2025-06-04 11:08:35,855 | INFO     | **************************************
[2025-06-04 13:25:58] 2025-06-04 11:08:35,855 | INFO     | 
[2025-06-04 13:25:58] 2025-06-04 11:08:35,865 | INFO     | architecture information:
[2025-06-04 13:25:58] 2025-06-04 11:08:35,869 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:25:58] 2025-06-04 11:08:36,019 | INFO     | cat /etc/os-release:
[2025-06-04 13:25:58] NAME="CentOS Linux"
[2025-06-04 13:25:58] VERSION="7 (Core)"
[2025-06-04 13:25:58] ID="centos"
[2025-06-04 13:25:58] ID_LIKE="rhel fedora"
[2025-06-04 13:25:58] VERSION_ID="7"
[2025-06-04 13:25:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:25:58] ANSI_COLOR="0;31"
[2025-06-04 13:25:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:25:58] HOME_URL="https://www.centos.org/"
[2025-06-04 13:25:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:25:58] 
[2025-06-04 13:25:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:25:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:25:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:25:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:25:58] 
[2025-06-04 13:25:58] 2025-06-04 11:08:36,019 | INFO     | **************************************
[2025-06-04 13:25:58] 2025-06-04 11:08:36,525 | INFO     | executing command: df -mP /scratch/.boinc/slots/7
[2025-06-04 13:25:58] 2025-06-04 11:08:36,637 | INFO     | sufficient remaining disk space (1669731450880 B)
[2025-06-04 13:25:58] 2025-06-04 11:08:36,638 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:25:58] 2025-06-04 11:08:36,638 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:25:58] 2025-06-04 11:08:36,638 | INFO     | update_server=False
[2025-06-04 13:25:58] 2025-06-04 11:08:36,638 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:25:58] 2025-06-04 11:08:36,638 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 13:25:58] 2025-06-04 11:08:36,639 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:25:58] 2025-06-04 11:08:36,639 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:25:58] 2025-06-04 11:08:36,639 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:25:58] 2025-06-04 11:08:36,639 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:25:58] 2025-06-04 11:08:36,640 | INFO     | aborting loop
[2025-06-04 13:25:58] 2025-06-04 11:08:36,678 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:25:58] 2025-06-04 11:08:37,144 | INFO     | all data control threads have been joined
[2025-06-04 13:25:58] 2025-06-04 11:08:37,598 | INFO     | all job control threads have been joined
[2025-06-04 13:25:58] 2025-06-04 11:08:37,618 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:25:58] 2025-06-04 11:08:37,644 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:25:58] 2025-06-04 11:08:37,645 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:25:58] 2025-06-04 11:08:37,794 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:25:58] 2025-06-04 11:08:37,798 | INFO     | all payload control threads have been joined
[2025-06-04 13:25:58] 2025-06-04 11:08:37,800 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:25:58] 2025-06-04 11:08:37,829 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:25:58] 2025-06-04 11:08:37,949 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:25:58] 2025-06-04 11:08:38,150 | INFO     | [data] control thread has finished
[2025-06-04 13:25:58] 2025-06-04 11:08:38,238 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:25:58] 2025-06-04 11:08:38,250 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:25:58] 2025-06-04 11:08:38,254 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:25:58] 2025-06-04 11:08:38,604 | INFO     | [job] control thread has finished
[2025-06-04 13:25:58] 2025-06-04 11:08:38,800 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:25:58] 2025-06-04 11:08:38,803 | INFO     | [payload] control thread has finished
[2025-06-04 13:25:58] 2025-06-04 11:08:39,125 | INFO     | [job] validate thread has finished
[2025-06-04 13:25:58] 2025-06-04 11:08:39,625 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:25:58] 2025-06-04 11:08:40,687 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:25:58] 2025-06-04 11:08:47,442 | INFO     | job.realtimelogging is not enabled
[2025-06-04 13:25:58] 2025-06-04 11:08:48,450 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:25:58] 2025-06-04 11:08:49,198 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140067099838272)>', '<ExcThread(monitor, started 140066299033344)>']
[2025-06-04 13:25:58] 2025-06-04 11:08:49,716 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:25:58] 2025-06-04 11:08:49,717 | INFO     | [monitor] control thread has ended
[2025-06-04 13:25:58] 2025-06-04 11:08:54,224 | INFO     | all workflow threads have been joined
[2025-06-04 13:25:58] 2025-06-04 11:08:54,225 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:25:58] 2025-06-04 11:08:54,225 | INFO     | traces error code: 0
[2025-06-04 13:25:58] 2025-06-04 11:08:54,225 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:25:58] 2025-06-04 11:08:54,508 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:25:58] 2025-06-04 11:08:54,546 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:25:58] 2025-06-04 11:08:54,584 [wrapper] pilotpid: 1630709
[2025-06-04 13:25:58] 2025-06-04 11:08:54,625 [wrapper] Pilot exit status: 0
[2025-06-04 13:25:58] 2025-06-04 11:08:54,793 [wrapper] pandaids: 6678150133
[2025-06-04 13:25:58] 2025-06-04 11:08:55,282 [wrapper] cleanup supervisor_pilot 2145049 1630710
[2025-06-04 13:25:58] 2025-06-04 11:08:55,309 [wrapper] Test setup, not cleaning
[2025-06-04 13:25:58] 2025-06-04 11:08:55,354 [wrapper] apfmon messages muted
[2025-06-04 13:25:58] 2025-06-04 11:08:55,396 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:25:58] 2025-06-04 11:08:55,418 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:25:58]  *** Error codes and diagnostics ***
[2025-06-04 13:25:58]     "exeErrorCode": 0,
[2025-06-04 13:25:58]     "exeErrorDiag": "",
[2025-06-04 13:25:58]     "pilotErrorCode": 0,
[2025-06-04 13:25:58]     "pilotErrorDiag": "",
[2025-06-04 13:25:58]  *** Listing of results directory ***
[2025-06-04 13:25:58] total 398116
[2025-06-04 13:25:58] -rw-r--r-- 1 boinc boinc    495897 Jun  3 23:41 pilot3.tar.gz
[2025-06-04 13:25:58] -rwx------ 1 boinc boinc     37140 Jun  3 23:52 runpilot2-wrapper.sh
[2025-06-04 13:25:58] -rw-r--r-- 1 boinc boinc      5111 Jun  3 23:52 queuedata.json
[2025-06-04 13:25:58] -rw-r--r-- 1 boinc boinc       100 Jun  4 11:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:25:58] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 11:57 run_atlas
[2025-06-04 13:25:58] -rw-r--r-- 1 boinc boinc       105 Jun  4 11:57 job.xml
[2025-06-04 13:25:58] -rw-r--r-- 1 boinc boinc      6664 Jun  4 11:57 init_data.xml
[2025-06-04 13:25:58] -rw-r--r-- 2 boinc boinc 215606941 Jun  4 11:57 EVNT.45006593._001868.pool.root.1
[2025-06-04 13:25:58] -rw-r--r-- 2 boinc boinc     15093 Jun  4 11:57 start_atlas.sh
[2025-06-04 13:25:58] drwxrwx--x 2 boinc boinc      4096 Jun  4 11:57 shared
[2025-06-04 13:25:58] -rw-r--r-- 2 boinc boinc    508873 Jun  4 11:57 input.tar.gz
[2025-06-04 13:25:58] -rw-r--r-- 1 boinc boinc         0 Jun  4 11:57 boinc_lockfile
[2025-06-04 13:25:58] -rw-r--r-- 1 boinc boinc      2524 Jun  4 11:57 pandaJob.out
[2025-06-04 13:25:58] -rw------- 1 boinc boinc    986766 Jun  4 11:58 agis_schedconf.cvmfs.json
[2025-06-04 13:25:58] -rw------- 1 boinc boinc   1603667 Jun  4 11:58 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:25:58] drwx------ 4 boinc boinc      4096 Jun  4 11:58 pilot3
[2025-06-04 13:25:58] -rw------- 1 boinc boinc 186704631 Jun  4 13:07 HITS.45006595._046632.pool.root.1
[2025-06-04 13:25:58] -rw-r--r-- 1 boinc boinc       528 Jun  4 13:07 boinc_task_state.xml
[2025-06-04 13:25:58] -rw------- 1 boinc boinc      1020 Jun  4 13:07 memory_monitor_summary.json
[2025-06-04 13:25:58] -rw------- 1 boinc boinc    371047 Jun  4 13:07 log.45006595._046632.job.log.tgz.1
[2025-06-04 13:25:58] -rw------- 1 boinc boinc        95 Jun  4 13:08 pilot_heartbeat.json
[2025-06-04 13:25:58] -rw------- 1 boinc boinc      7699 Jun  4 13:08 heartbeat.json
[2025-06-04 13:25:58] -rw------- 1 boinc boinc      4551 Jun  4 13:08 pilotlog.txt
[2025-06-04 13:25:58] -rw------- 1 boinc boinc    393035 Jun  4 13:08 log.45006595._046632.job.log.1
[2025-06-04 13:25:58] -rw------- 1 boinc boinc       357 Jun  4 13:08 output.list
[2025-06-04 13:25:58] -rw-r--r-- 1 boinc boinc       620 Jun  4 13:08 runtime_log
[2025-06-04 13:25:58] -rw------- 1 boinc boinc    778240 Jun  4 13:08 result.tar.gz
[2025-06-04 13:25:58] -rw------- 1 boinc boinc       662 Jun  4 13:08 YwoLDmAkog7n9Rq4apOajLDm4fhM0noT9bVof3QYDml4ZKDmi8pdRo.diag
[2025-06-04 13:25:58] -rw-r--r-- 1 boinc boinc      8720 Jun  4 13:08 runtime_log.err
[2025-06-04 13:25:58] -rw-r--r-- 1 boinc boinc        25 Jun  4 13:25 wrapper_checkpoint.txt
[2025-06-04 13:25:58] -rw-r--r-- 1 boinc boinc      8192 Jun  4 13:25 boinc_mmap_file
[2025-06-04 13:25:58] -rw-r--r-- 1 boinc boinc     22484 Jun  4 13:25 stderr.txt
[2025-06-04 13:25:58] HITS file was successfully produced:
[2025-06-04 13:25:58] -rw------- 1 boinc boinc 186704631 Jun  4 13:07 shared/HITS.pool.root.1
[2025-06-04 13:25:58]  *** Contents of shared directory: ***
[2025-06-04 13:25:58] total 394172
[2025-06-04 13:25:58] -rw-r--r-- 2 boinc boinc 215606941 Jun  4 11:57 ATLAS.root_0
[2025-06-04 13:25:58] -rw-r--r-- 2 boinc boinc     15093 Jun  4 11:57 start_atlas.sh
[2025-06-04 13:25:58] -rw-r--r-- 2 boinc boinc    508873 Jun  4 11:57 input.tar.gz
[2025-06-04 13:25:58] -rw------- 1 boinc boinc 186704631 Jun  4 13:07 HITS.pool.root.1
[2025-06-04 13:25:58] -rw------- 1 boinc boinc    778240 Jun  4 13:08 result.tar.gz
13:26:00 (1611337): run_atlas exited; CPU time 35134.871248
13:26:00 (1611337): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN