Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:49:13 (1748564): wrapper (7.7.26015): starting
13:49:13 (1748564): wrapper: running run_atlas (--nthreads 6)
[2025-06-04 13:49:13] Arguments: --nthreads 6
[2025-06-04 13:49:13] Threads: 6
[2025-06-04 13:49:13] Checking for CVMFS
[2025-06-04 13:49:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 13:49:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 13:49:13] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 13:49:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 13:49:14] 2.11.5.0 4066018 1817 75136 146767 0 187 47557854 52428801 1858 130560 0 5224263 99.997 515107 106 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-06-04 13:49:14] CVMFS is ok
[2025-06-04 13:49:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 13:49:14] Checking for apptainer binary...
[2025-06-04 13:49:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 13:49:14] Running /usr/bin/apptainer --version
[2025-06-04 13:49:14] apptainer version 1.3.5-1.el9
[2025-06-04 13:49:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 13:49:14] testio008
[2025-06-04 13:49:14] apptainer works
[2025-06-04 13:49:14] Set ATHENA_PROC_NUMBER=6
[2025-06-04 13:49:14] Set ATHENA_CORE_NUMBER=6
[2025-06-04 13:49:14] Starting ATLAS job with PandaID=6678016522
[2025-06-04 13:49:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:53:48]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:53:48]  filesize=279154
[2025-06-04 14:53:48]  filetype=log
[2025-06-04 14:53:48]  guid=090d0273-cd99-4399-9e49-938ac562e57e
[2025-06-04 14:53:48]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 14:53:48]  is_altstaged=None
[2025-06-04 14:53:48]  is_tar=False
[2025-06-04 14:53:48]  lfn=log.45006595._044648.job.log.tgz.1
[2025-06-04 14:53:48]  mtime=0
[2025-06-04 14:53:48]  protocol_id=None
[2025-06-04 14:53:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 14:53:48]  replicas=None
[2025-06-04 14:53:48]  scope=mc23_13p6TeV
[2025-06-04 14:53:48]  status=None
[2025-06-04 14:53:48]  status_code=0
[2025-06-04 14:53:48]  storage_token=
[2025-06-04 14:53:48]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6678016522/log.45006595._044648.job.log.tgz.1
[2025-06-04 14:53:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/30/74/log.45006595._044648.job.log.tgz.1
[2025-06-04 14:53:48]  workdir=None
[2025-06-04 14:53:48] ]
[2025-06-04 14:53:48] 2025-06-04 05:53:25,166 | INFO     | transferring file log.45006595._044648.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6678016522/log.45006595._044648.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 14:53:48] 2025-06-04 05:53:25,166 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6678016522/log.45006595._044648.job.log.tgz.1 /var/lib/boinc/slots/2/log.45006595._044648.job
[2025-06-04 14:53:48] 2025-06-04 05:53:25,179 | INFO     | adding to output.list: log.45006595._044648.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/30/74/log.45006595._044648.job.log.tg
[2025-06-04 14:53:48] 2025-06-04 05:53:25,180 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 14:53:48] 2025-06-04 05:53:25,180 | INFO     | summary of transferred files:
[2025-06-04 14:53:48] 2025-06-04 05:53:25,180 | INFO     |  -- lfn=log.45006595._044648.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 14:53:48] 2025-06-04 05:53:25,180 | INFO     | stage-out finished correctly
[2025-06-04 14:53:48] 2025-06-04 05:53:27,479 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 14:53:48] 2025-06-04 05:53:27,742 | INFO     | job 6678016522 has state=finished
[2025-06-04 14:53:48] 2025-06-04 05:53:27,742 | INFO     | preparing for final server update for job 6678016522 in state='finished'
[2025-06-04 14:53:48] 2025-06-04 05:53:27,743 | INFO     | this job has now completed (state=finished)
[2025-06-04 14:53:48] 2025-06-04 05:53:27,743 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 14:53:48] 2025-06-04 05:53:27,743 | INFO     | log transfer has been attempted: DONE
[2025-06-04 14:53:48] 2025-06-04 05:53:27,743 | INFO     | job 6678016522 has finished - writing final server update
[2025-06-04 14:53:48] 2025-06-04 05:53:27,743 | INFO     | total number of processed events: 400 (read)
[2025-06-04 14:53:48] 2025-06-04 05:53:27,744 | WARNING  | process 1758811 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 14:53:48] 2025-06-04 05:53:27,744 | INFO     | executing command: lscpu
[2025-06-04 14:53:48] 2025-06-04 05:53:27,744 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6678016522/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:53:48] 2025-06-04 05:53:27,758 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 14:53:48] 2025-06-04 05:53:27,793 | INFO     | number of running child processes to parent process 1758811: 1
[2025-06-04 14:53:48] 2025-06-04 05:53:27,793 | INFO     | maximum number of monitored processes: 6
[2025-06-04 14:53:48] 2025-06-04 05:53:29,422 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 14:53:48] 2025-06-04 05:53:29,422 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6678016522/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:53:48] 2025-06-04 05:53:29,423 | INFO     | extracted standard info from prmon json
[2025-06-04 14:53:48] 2025-06-04 05:53:29,423 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 14:53:48] 2025-06-04 05:53:29,423 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:53:48] 2025-06-04 05:53:29,423 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:53:48] 2025-06-04 05:53:29,423 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:53:48] 2025-06-04 05:53:29,424 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:53:48] 2025-06-04 05:53:29,424 | INFO     | sum of square deviations: 54438230.0
[2025-06-04 14:53:48] 2025-06-04 05:53:29,424 | INFO     | sum of deviations: 9307234088.0
[2025-06-04 14:53:48] 2025-06-04 05:53:29,424 | INFO     | mean x: 1749014561.5
[2025-06-04 14:53:48] 2025-06-04 05:53:29,424 | INFO     | mean y: 2371508.3928571427
[2025-06-04 14:53:48] 2025-06-04 05:53:29,424 | INFO     | -- intersect: -299024396026.1352
[2025-06-04 14:53:48] 2025-06-04 05:53:29,424 | INFO     | intersect: -299024396026.1352
[2025-06-04 14:53:48] 2025-06-04 05:53:29,424 | INFO     | chi2: 1.4739509806308992
[2025-06-04 14:53:48] 2025-06-04 05:53:29,424 | INFO     | -- intersect: -299024396026.1352
[2025-06-04 14:53:48] 2025-06-04 05:53:29,425 | INFO     | current memory leak: 170.97 B/s (using 56 data points, chi2=1.47)
[2025-06-04 14:53:48] 2025-06-04 05:53:29,425 | INFO     | ..............................
[2025-06-04 14:53:48] 2025-06-04 05:53:29,425 | INFO     | . Timing measurements:
[2025-06-04 14:53:48] 2025-06-04 05:53:29,425 | INFO     | . get job = 0 s
[2025-06-04 14:53:48] 2025-06-04 05:53:29,425 | INFO     | . initial setup = 4 s
[2025-06-04 14:53:48] 2025-06-04 05:53:29,425 | INFO     | . payload setup = 2 s
[2025-06-04 14:53:48] 2025-06-04 05:53:29,425 | INFO     | . stage-in = 0 s
[2025-06-04 14:53:48] 2025-06-04 05:53:29,425 | INFO     | . payload execution = 3822 s
[2025-06-04 14:53:48] 2025-06-04 05:53:29,425 | INFO     | . stage-out = 0 s
[2025-06-04 14:53:48] 2025-06-04 05:53:29,425 | INFO     | . log creation = 0 s
[2025-06-04 14:53:48] 2025-06-04 05:53:29,425 | INFO     | ..............................
[2025-06-04 14:53:48] 2025-06-04 05:53:29,513 | INFO     | 
[2025-06-04 14:53:48] 2025-06-04 05:53:29,513 | INFO     | job summary report
[2025-06-04 14:53:48] 2025-06-04 05:53:29,513 | INFO     | --------------------------------------------------
[2025-06-04 14:53:48] 2025-06-04 05:53:29,513 | INFO     | PanDA job id: 6678016522
[2025-06-04 14:53:48] 2025-06-04 05:53:29,513 | INFO     | task id: 45006595
[2025-06-04 14:53:48] 2025-06-04 05:53:29,513 | INFO     | errors: (none)
[2025-06-04 14:53:48] 2025-06-04 05:53:29,513 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:53:48] 2025-06-04 05:53:29,513 | INFO     | pilot state: finished 
[2025-06-04 14:53:48] 2025-06-04 05:53:29,513 | INFO     | transexitcode: 0
[2025-06-04 14:53:48] 2025-06-04 05:53:29,513 | INFO     | exeerrorcode: 0
[2025-06-04 14:53:48] 2025-06-04 05:53:29,513 | INFO     | exeerrordiag: 
[2025-06-04 14:53:48] 2025-06-04 05:53:29,513 | INFO     | exitcode: 0
[2025-06-04 14:53:48] 2025-06-04 05:53:29,513 | INFO     | exitmsg: OK
[2025-06-04 14:53:48] 2025-06-04 05:53:29,514 | INFO     | cpuconsumptiontime: 18238 s
[2025-06-04 14:53:48] 2025-06-04 05:53:29,514 | INFO     | nevents: 400
[2025-06-04 14:53:48] 2025-06-04 05:53:29,514 | INFO     | neventsw: 0
[2025-06-04 14:53:48] 2025-06-04 05:53:29,514 | INFO     | pid: 1758811
[2025-06-04 14:53:48] 2025-06-04 05:53:29,514 | INFO     | pgrp: 1758811
[2025-06-04 14:53:48] 2025-06-04 05:53:29,514 | INFO     | corecount: 6
[2025-06-04 14:53:48] 2025-06-04 05:53:29,514 | INFO     | event service: False
[2025-06-04 14:53:48] 2025-06-04 05:53:29,514 | INFO     | sizes: {0: 2405184, 2: 2405390, 11: 2405418, 3828: 2431157, 3830: 2440098, 3832: 2440154, 3834: 2440452}
[2025-06-04 14:53:48] 2025-06-04 05:53:29,514 | INFO     | --------------------------------------------------
[2025-06-04 14:53:48] 2025-06-04 05:53:29,514 | INFO     | 
[2025-06-04 14:53:48] 2025-06-04 05:53:29,514 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-06-04 14:53:48] 2025-06-04 05:53:29,528 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:53:48] 2025-06-04 05:53:29,528 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:53:48] 2025-06-04 05:53:29,529 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:53:48] 2025-06-04 05:53:29,529 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:53:48] 2025-06-04 05:53:29,529 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:53:48] 2025-06-04 05:53:29,529 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:53:48] 2025-06-04 05:53:29,529 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:53:48] 2025-06-04 05:53:29,529 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:53:48] 2025-06-04 05:53:29,529 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:53:48] 2025-06-04 05:53:29,529 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:53:48] 2025-06-04 05:53:29,529 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:53:48] 2025-06-04 05:53:29,529 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:53:48] 2025-06-04 05:53:29,529 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:53:48] 2025-06-04 05:53:29,529 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:53:48] 2025-06-04 05:53:29,529 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:53:48] 2025-06-04 05:53:29,529 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:53:48] 2025-06-04 05:53:29,529 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:53:48] 2025-06-04 05:53:29,529 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:53:48] 2025-06-04 05:53:29,529 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:53:48] 2025-06-04 05:53:29,529 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:53:48] 2025-06-04 05:53:29,529 | INFO     | job 6678016522 has completed (purged errors)
[2025-06-04 14:53:48] 2025-06-04 05:53:29,529 | INFO     | overall cleanup function is called
[2025-06-04 14:53:48] 2025-06-04 05:53:30,535 | INFO     | --- collectZombieJob: --- 10, [1758811]
[2025-06-04 14:53:48] 2025-06-04 05:53:30,535 | INFO     | zombie collector waiting for pid 1758811
[2025-06-04 14:53:48] 2025-06-04 05:53:30,536 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:53:48] 2025-06-04 05:53:30,536 | INFO     | collected zombie processes
[2025-06-04 14:53:48] 2025-06-04 05:53:30,536 | INFO     | will attempt to kill all subprocesses of pid=1758811
[2025-06-04 14:53:48] 2025-06-04 05:53:30,574 | INFO     | process IDs to be killed: [1758811] (in reverse order)
[2025-06-04 14:53:48] 2025-06-04 05:53:30,596 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:53:48] 2025-06-04 05:53:30,596 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:53:48] 2025-06-04 05:53:30,598 | INFO     | did not find any defunct processes belonging to 1758811
[2025-06-04 14:53:48] 2025-06-04 05:53:30,600 | INFO     | did not find any defunct processes belonging to 1758811
[2025-06-04 14:53:48] 2025-06-04 05:53:30,600 | INFO     | ready for new job
[2025-06-04 14:53:48] 2025-06-04 05:53:30,600 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:53:48] 2025-06-04 05:53:30,601 | INFO     | **************************************
[2025-06-04 14:53:48] 2025-06-04 05:53:30,601 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:53:48] 2025-06-04 05:53:30,601 | INFO     | **************************************
[2025-06-04 14:53:48] 2025-06-04 05:53:30,601 | INFO     | 
[2025-06-04 14:53:48] 2025-06-04 05:53:30,602 | INFO     | architecture information:
[2025-06-04 14:53:48] 2025-06-04 05:53:30,602 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:53:48] 2025-06-04 05:53:30,610 | INFO     | cat /etc/os-release:
[2025-06-04 14:53:48] NAME="CentOS Linux"
[2025-06-04 14:53:48] VERSION="7 (Core)"
[2025-06-04 14:53:48] ID="centos"
[2025-06-04 14:53:48] ID_LIKE="rhel fedora"
[2025-06-04 14:53:48] VERSION_ID="7"
[2025-06-04 14:53:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:53:48] ANSI_COLOR="0;31"
[2025-06-04 14:53:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:53:48] HOME_URL="https://www.centos.org/"
[2025-06-04 14:53:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:53:48] 
[2025-06-04 14:53:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:53:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:53:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:53:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:53:48] 
[2025-06-04 14:53:48] 2025-06-04 05:53:30,610 | INFO     | **************************************
[2025-06-04 14:53:48] 2025-06-04 05:53:31,112 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-06-04 14:53:48] 2025-06-04 05:53:31,122 | INFO     | sufficient remaining disk space (276411973632 B)
[2025-06-04 14:53:48] 2025-06-04 05:53:31,122 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:53:48] 2025-06-04 05:53:31,122 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:53:48] 2025-06-04 05:53:31,122 | INFO     | update_server=False
[2025-06-04 14:53:48] 2025-06-04 05:53:31,122 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:53:48] 2025-06-04 05:53:31,122 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:53:48] 2025-06-04 05:53:31,122 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:53:48] 2025-06-04 05:53:31,299 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:53:48] 2025-06-04 05:53:31,299 | INFO     | aborting loop
[2025-06-04 14:53:48] 2025-06-04 05:53:31,705 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:53:48] 2025-06-04 05:53:31,705 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:53:48] 2025-06-04 05:53:31,705 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:53:48] 2025-06-04 05:53:32,126 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:53:48] 2025-06-04 05:53:32,127 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:53:48] 2025-06-04 05:53:32,177 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:53:48] 2025-06-04 05:53:32,224 | INFO     | all data control threads have been joined
[2025-06-04 14:53:48] 2025-06-04 05:53:32,282 | INFO     | all job control threads have been joined
[2025-06-04 14:53:48] 2025-06-04 05:53:32,304 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:53:48] 2025-06-04 05:53:32,421 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:53:48] 2025-06-04 05:53:32,563 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:53:48] 2025-06-04 05:53:32,581 | INFO     | all payload control threads have been joined
[2025-06-04 14:53:48] 2025-06-04 05:53:32,654 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:53:48] 2025-06-04 05:53:33,127 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:53:48] 2025-06-04 05:53:33,229 | INFO     | [data] control thread has finished
[2025-06-04 14:53:48] 2025-06-04 05:53:33,287 | INFO     | [job] control thread has finished
[2025-06-04 14:53:48] 2025-06-04 05:53:33,415 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:53:48] 2025-06-04 05:53:33,457 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:53:48] 2025-06-04 05:53:33,533 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:53:48] 2025-06-04 05:53:33,586 | INFO     | [payload] control thread has finished
[2025-06-04 14:53:48] 2025-06-04 05:53:33,586 | INFO     | [job] validate thread has finished
[2025-06-04 14:53:48] 2025-06-04 05:53:37,538 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:53:48] 2025-06-04 05:53:41,179 | INFO     | job.realtimelogging is not enabled
[2025-06-04 14:53:48] 2025-06-04 05:53:42,185 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:53:48] 2025-06-04 05:53:43,372 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139864897902400)>', '<ExcThread(monitor, started 139864615913216)>']
[2025-06-04 14:53:48] 2025-06-04 05:53:43,761 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:53:48] 2025-06-04 05:53:43,761 | INFO     | [monitor] control thread has ended
[2025-06-04 14:53:48] 2025-06-04 05:53:48,397 | INFO     | all workflow threads have been joined
[2025-06-04 14:53:48] 2025-06-04 05:53:48,397 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:53:48] 2025-06-04 05:53:48,397 | INFO     | traces error code: 0
[2025-06-04 14:53:48] 2025-06-04 05:53:48,397 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:53:48] 2025-06-04 05:53:48,460 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:53:48] 2025-06-04 05:53:48,461 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:53:48] 2025-06-04 05:53:48,462 [wrapper] pilotpid: 1752260
[2025-06-04 14:53:48] 2025-06-04 05:53:48,463 [wrapper] Pilot exit status: 0
[2025-06-04 14:53:48] 2025-06-04 05:53:48,467 [wrapper] pandaids: 6678016522
[2025-06-04 14:53:48] 2025-06-04 05:53:48,478 [wrapper] cleanup supervisor_pilot 1814739 1752261
[2025-06-04 14:53:48] 2025-06-04 05:53:48,479 [wrapper] Test setup, not cleaning
[2025-06-04 14:53:48] 2025-06-04 05:53:48,480 [wrapper] apfmon messages muted
[2025-06-04 14:53:48] 2025-06-04 05:53:48,481 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:53:48] 2025-06-04 05:53:48,482 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:53:48]  *** Error codes and diagnostics ***
[2025-06-04 14:53:48]     "exeErrorCode": 0,
[2025-06-04 14:53:48]     "exeErrorDiag": "",
[2025-06-04 14:53:48]     "pilotErrorCode": 0,
[2025-06-04 14:53:48]     "pilotErrorDiag": "",
[2025-06-04 14:53:48]  *** Listing of results directory ***
[2025-06-04 14:53:48] total 397264
[2025-06-04 14:53:48] -rw-r--r--. 1 boinc boinc      5111 Jun  4 05:06 queuedata.json
[2025-06-04 14:53:48] -rwx------. 1 boinc boinc     37140 Jun  4 05:09 runpilot2-wrapper.sh
[2025-06-04 14:53:48] -rw-r--r--. 1 boinc boinc    495897 Jun  4 05:09 pilot3.tar.gz
[2025-06-04 14:53:48] -rw-r--r--. 1 boinc boinc       100 Jun  4 13:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:53:48] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 13:49 run_atlas
[2025-06-04 14:53:48] -rw-r--r--. 1 boinc boinc       105 Jun  4 13:49 job.xml
[2025-06-04 14:53:48] -rw-r--r--. 2 boinc boinc 216105133 Jun  4 13:49 EVNT.45006593._001791.pool.root.1
[2025-06-04 14:53:48] -rw-r--r--. 2 boinc boinc     15093 Jun  4 13:49 start_atlas.sh
[2025-06-04 14:53:48] drwxrwx--x. 2 boinc boinc        68 Jun  4 13:49 shared
[2025-06-04 14:53:48] -rw-r--r--. 2 boinc boinc    508875 Jun  4 13:49 input.tar.gz
[2025-06-04 14:53:48] -rw-r--r--. 1 boinc boinc      9509 Jun  4 13:49 init_data.xml
[2025-06-04 14:53:48] -rw-r--r--. 1 boinc boinc         0 Jun  4 13:49 boinc_lockfile
[2025-06-04 14:53:48] -rw-r--r--. 1 boinc boinc      2525 Jun  4 13:49 pandaJob.out
[2025-06-04 14:53:48] -rw-------. 1 boinc boinc    986077 Jun  4 13:49 agis_schedconf.cvmfs.json
[2025-06-04 14:53:48] -rw-------. 1 boinc boinc   1603667 Jun  4 13:49 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:53:48] drwx------. 4 boinc boinc      4096 Jun  4 13:49 pilot3
[2025-06-04 14:53:48] -rw-------. 1 boinc boinc        95 Jun  4 14:52 pilot_heartbeat.json
[2025-06-04 14:53:48] -rw-------. 1 boinc boinc 185515942 Jun  4 14:52 HITS.45006595._044648.pool.root.1
[2025-06-04 14:53:48] -rw-------. 1 boinc boinc      1021 Jun  4 14:53 memory_monitor_summary.json
[2025-06-04 14:53:48] -rw-r--r--. 1 boinc boinc      8192 Jun  4 14:53 boinc_mmap_file
[2025-06-04 14:53:48] -rw-r--r--. 1 boinc boinc        27 Jun  4 14:53 wrapper_checkpoint.txt
[2025-06-04 14:53:48] -rw-r--r--. 1 boinc boinc       529 Jun  4 14:53 boinc_task_state.xml
[2025-06-04 14:53:48] -rw-------. 1 boinc boinc    279154 Jun  4 14:53 log.45006595._044648.job.log.tgz.1
[2025-06-04 14:53:48] -rw-------. 1 boinc boinc      7668 Jun  4 14:53 heartbeat.json
[2025-06-04 14:53:48] -rw-------. 1 boinc boinc      4426 Jun  4 14:53 pilotlog.txt
[2025-06-04 14:53:48] -rw-------. 1 boinc boinc    396903 Jun  4 14:53 log.45006595._044648.job.log.1
[2025-06-04 14:53:48] -rw-------. 1 boinc boinc       357 Jun  4 14:53 output.list
[2025-06-04 14:53:48] -rw-r--r--. 1 boinc boinc       620 Jun  4 14:53 runtime_log
[2025-06-04 14:53:48] -rw-------. 1 boinc boinc    696320 Jun  4 14:53 result.tar.gz
[2025-06-04 14:53:48] -rw-r--r--. 1 boinc boinc      8617 Jun  4 14:53 runtime_log.err
[2025-06-04 14:53:48] -rw-------. 1 boinc boinc       641 Jun  4 14:53 AViLDmW8mg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm71lKDm2qPITo.diag
[2025-06-04 14:53:48] -rw-r--r--. 1 boinc boinc     20786 Jun  4 14:53 stderr.txt
[2025-06-04 14:53:48] HITS file was successfully produced:
[2025-06-04 14:53:48] -rw-------. 1 boinc boinc 185515942 Jun  4 14:52 shared/HITS.pool.root.1
[2025-06-04 14:53:48]  *** Contents of shared directory: ***
[2025-06-04 14:53:48] total 393408
[2025-06-04 14:53:48] -rw-r--r--. 2 boinc boinc 216105133 Jun  4 13:49 ATLAS.root_0
[2025-06-04 14:53:48] -rw-r--r--. 2 boinc boinc     15093 Jun  4 13:49 start_atlas.sh
[2025-06-04 14:53:48] -rw-r--r--. 2 boinc boinc    508875 Jun  4 13:49 input.tar.gz
[2025-06-04 14:53:48] -rw-------. 1 boinc boinc 185515942 Jun  4 14:52 HITS.pool.root.1
[2025-06-04 14:53:48] -rw-------. 1 boinc boinc    696320 Jun  4 14:53 result.tar.gz
14:53:50 (1748564): run_atlas exited; CPU time 18261.821289
14:53:50 (1748564): called boinc_finish(0)

</stderr_txt>
]]>

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