Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:38:41 (1424821): wrapper (7.7.26015): starting
23:38:41 (1424821): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 23:38:41] Arguments: --nthreads 12
[2025-06-03 23:38:41] Threads: 12
[2025-06-03 23:38:41] Checking for CVMFS
[2025-06-03 23:38:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 23:38:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 23:38:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 23:38:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 23:38:42] 2.12.6.0 6469 291 122148 146767 0 65 21498351 32935937 8590 16776704 0 3891048 99.787 920124 33378 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 23:38:42] CVMFS is ok
[2025-06-03 23:38:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 23:38:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 23:38:42] Further information can be found at the LHC@home message board.
[2025-06-03 23:38:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 23:38:42] Checking for apptainer binary...
[2025-06-03 23:38:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 23:38:42] Running /usr/bin/apptainer --version
[2025-06-03 23:38:42] apptainer version 1.4.1-1.el9
[2025-06-03 23:38:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 23:38:42] c6-1-26-3.aglt2.org
[2025-06-03 23:38:42] apptainer works
[2025-06-03 23:38:42] Set ATHENA_PROC_NUMBER=12
[2025-06-03 23:38:42] Set ATHENA_CORE_NUMBER=12
[2025-06-03 23:38:42] Starting ATLAS job with PandaID=6666849813
[2025-06-03 23:38:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 00:47:50]  *** The last 200 lines of the pilot log: ***
[2025-06-04 00:47:50]  guid=fc3a694a-72c2-4c6c-97f9-67504a41291c
[2025-06-04 00:47:50]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 00:47:50]  is_altstaged=None
[2025-06-04 00:47:50]  is_tar=False
[2025-06-04 00:47:50]  lfn=log.44871837._064178.job.log.tgz.1
[2025-06-04 00:47:50]  mtime=0
[2025-06-04 00:47:50]  protocol_id=None
[2025-06-04 00:47:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 00:47:50]  replicas=None
[2025-06-04 00:47:50]  scope=mc23_13p6TeV
[2025-06-04 00:47:50]  status=None
[2025-06-04 00:47:50]  status_code=0
[2025-06-04 00:47:50]  storage_token=
[2025-06-04 00:47:50]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6666849813/log.44871837._064178.job.log.tgz.1
[2025-06-04 00:47:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e9/b9/log.44871837._064178.job.log.tgz.1
[2025-06-04 00:47:50]  workdir=None
[2025-06-04 00:47:50] ]
[2025-06-04 00:47:50] 2025-06-04 04:47:23,662 | INFO     | transferring file log.44871837._064178.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6666849813/log.44871837._064178.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 00:47:50] 2025-06-04 04:47:23,663 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6666849813/log.44871837._064178.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._064178.job
[2025-06-04 00:47:50] 2025-06-04 04:47:23,680 | INFO     | adding to output.list: log.44871837._064178.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e9/b9/log.44871837._064178.job.log.tg
[2025-06-04 00:47:50] 2025-06-04 04:47:23,681 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 00:47:50] 2025-06-04 04:47:23,681 | INFO     | summary of transferred files:
[2025-06-04 00:47:50] 2025-06-04 04:47:23,681 | INFO     |  -- lfn=log.44871837._064178.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 00:47:50] 2025-06-04 04:47:23,682 | INFO     | stage-out finished correctly
[2025-06-04 00:47:50] 2025-06-04 04:47:25,258 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 00:47:50] 2025-06-04 04:47:25,521 | INFO     | monitor loop #312: job 0:6666849813 is in state 'finished'
[2025-06-04 00:47:50] 2025-06-04 04:47:25,522 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 00:47:50] 2025-06-04 04:47:27,781 | INFO     | job 6666849813 has state=finished
[2025-06-04 00:47:50] 2025-06-04 04:47:27,781 | INFO     | preparing for final server update for job 6666849813 in state='finished'
[2025-06-04 00:47:50] 2025-06-04 04:47:27,782 | INFO     | this job has now completed (state=finished)
[2025-06-04 00:47:50] 2025-06-04 04:47:27,782 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 00:47:50] 2025-06-04 04:47:27,782 | INFO     | log transfer has been attempted: DONE
[2025-06-04 00:47:50] 2025-06-04 04:47:27,782 | INFO     | job 6666849813 has finished - writing final server update
[2025-06-04 00:47:50] 2025-06-04 04:47:27,782 | INFO     | total number of processed events: 400 (read)
[2025-06-04 00:47:50] 2025-06-04 04:47:27,798 | INFO     | executing command: lscpu
[2025-06-04 00:47:50] 2025-06-04 04:47:27,867 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 00:47:50] 2025-06-04 04:47:28,025 | INFO     | monitor loop #313: job 0:6666849813 is in state 'finished'
[2025-06-04 00:47:50] 2025-06-04 04:47:28,025 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 00:47:50] 2025-06-04 04:47:30,528 | INFO     | monitor loop #314: job 0:6666849813 is in state 'finished'
[2025-06-04 00:47:50] 2025-06-04 04:47:30,528 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 00:47:50] 2025-06-04 04:47:31,470 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 00:47:50] 2025-06-04 04:47:31,470 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6666849813/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 00:47:50] 2025-06-04 04:47:31,471 | INFO     | extracted standard info from prmon json
[2025-06-04 00:47:50] 2025-06-04 04:47:31,471 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 00:47:50] 2025-06-04 04:47:31,471 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 00:47:50] 2025-06-04 04:47:31,471 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 00:47:50] 2025-06-04 04:47:31,472 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 00:47:50] 2025-06-04 04:47:31,473 | INFO     | fitting pss+swap vs Time
[2025-06-04 00:47:50] 2025-06-04 04:47:31,473 | INFO     | sum of square deviations: 66959395.0
[2025-06-04 00:47:50] 2025-06-04 04:47:31,473 | INFO     | sum of deviations: -2497799726.499999
[2025-06-04 00:47:50] 2025-06-04 04:47:31,473 | INFO     | mean x: 1749010460.5
[2025-06-04 00:47:50] 2025-06-04 04:47:31,473 | INFO     | mean y: 2509945.1166666667
[2025-06-04 00:47:50] 2025-06-04 04:47:31,473 | INFO     | -- intersect: 65246197554.33921
[2025-06-04 00:47:50] 2025-06-04 04:47:31,473 | INFO     | intersect: 65246197554.33921
[2025-06-04 00:47:50] 2025-06-04 04:47:31,473 | INFO     | chi2: 0.920309073221877
[2025-06-04 00:47:50] 2025-06-04 04:47:31,473 | INFO     | -- intersect: 65246197554.33921
[2025-06-04 00:47:50] 2025-06-04 04:47:31,474 | INFO     | current memory leak: -37.30 B/s (using 60 data points, chi2=0.92)
[2025-06-04 00:47:50] 2025-06-04 04:47:31,474 | INFO     | ..............................
[2025-06-04 00:47:50] 2025-06-04 04:47:31,474 | INFO     | . Timing measurements:
[2025-06-04 00:47:50] 2025-06-04 04:47:31,474 | INFO     | . get job = 0 s
[2025-06-04 00:47:50] 2025-06-04 04:47:31,474 | INFO     | . initial setup = 2 s
[2025-06-04 00:47:50] 2025-06-04 04:47:31,474 | INFO     | . payload setup = 6 s
[2025-06-04 00:47:50] 2025-06-04 04:47:31,474 | INFO     | . stage-in = 0 s
[2025-06-04 00:47:50] 2025-06-04 04:47:31,474 | INFO     | . payload execution = 4086 s
[2025-06-04 00:47:50] 2025-06-04 04:47:31,474 | INFO     | . stage-out = 0 s
[2025-06-04 00:47:50] 2025-06-04 04:47:31,474 | INFO     | . log creation = 0 s
[2025-06-04 00:47:50] 2025-06-04 04:47:31,474 | INFO     | ..............................
[2025-06-04 00:47:50] 2025-06-04 04:47:31,836 | INFO     | 
[2025-06-04 00:47:50] 2025-06-04 04:47:31,836 | INFO     | job summary report
[2025-06-04 00:47:50] 2025-06-04 04:47:31,836 | INFO     | --------------------------------------------------
[2025-06-04 00:47:50] 2025-06-04 04:47:31,836 | INFO     | PanDA job id: 6666849813
[2025-06-04 00:47:50] 2025-06-04 04:47:31,836 | INFO     | task id: 44871837
[2025-06-04 00:47:50] 2025-06-04 04:47:31,836 | INFO     | errors: (none)
[2025-06-04 00:47:50] 2025-06-04 04:47:31,836 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 00:47:50] 2025-06-04 04:47:31,836 | INFO     | pilot state: finished 
[2025-06-04 00:47:50] 2025-06-04 04:47:31,836 | INFO     | transexitcode: 0
[2025-06-04 00:47:50] 2025-06-04 04:47:31,836 | INFO     | exeerrorcode: 0
[2025-06-04 00:47:50] 2025-06-04 04:47:31,836 | INFO     | exeerrordiag: 
[2025-06-04 00:47:50] 2025-06-04 04:47:31,837 | INFO     | exitcode: 0
[2025-06-04 00:47:50] 2025-06-04 04:47:31,837 | INFO     | exitmsg: OK
[2025-06-04 00:47:50] 2025-06-04 04:47:31,837 | INFO     | cpuconsumptiontime: 40861 s
[2025-06-04 00:47:50] 2025-06-04 04:47:31,837 | INFO     | nevents: 400
[2025-06-04 00:47:50] 2025-06-04 04:47:31,837 | INFO     | neventsw: 0
[2025-06-04 00:47:50] 2025-06-04 04:47:31,837 | INFO     | pid: 1435012
[2025-06-04 00:47:50] 2025-06-04 04:47:31,837 | INFO     | pgrp: 1435012
[2025-06-04 00:47:50] 2025-06-04 04:47:31,837 | INFO     | corecount: 12
[2025-06-04 00:47:50] 2025-06-04 04:47:31,837 | INFO     | event service: False
[2025-06-04 00:47:50] 2025-06-04 04:47:31,837 | INFO     | sizes: {0: 2405183, 4: 2405389, 11: 2405417, 4096: 2431241, 4097: 2440182, 4098: 2440238, 4105: 2440536}
[2025-06-04 00:47:50] 2025-06-04 04:47:31,837 | INFO     | --------------------------------------------------
[2025-06-04 00:47:50] 2025-06-04 04:47:31,837 | INFO     | 
[2025-06-04 00:47:50] 2025-06-04 04:47:31,837 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 00:47:50] 2025-06-04 04:47:31,860 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 00:47:50] 2025-06-04 04:47:31,861 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 00:47:50] 2025-06-04 04:47:31,861 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 00:47:50] 2025-06-04 04:47:31,861 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 00:47:50] 2025-06-04 04:47:31,861 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 00:47:50] 2025-06-04 04:47:31,861 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 00:47:50] 2025-06-04 04:47:31,861 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 00:47:50] 2025-06-04 04:47:31,861 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 00:47:50] 2025-06-04 04:47:31,861 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 00:47:50] 2025-06-04 04:47:31,861 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 00:47:50] 2025-06-04 04:47:31,861 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 00:47:50] 2025-06-04 04:47:31,861 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 00:47:50] 2025-06-04 04:47:31,861 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 00:47:50] 2025-06-04 04:47:31,862 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 00:47:50] 2025-06-04 04:47:31,862 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 00:47:50] 2025-06-04 04:47:31,862 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 00:47:50] 2025-06-04 04:47:31,862 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 00:47:50] 2025-06-04 04:47:31,862 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 00:47:50] 2025-06-04 04:47:31,862 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 00:47:50] 2025-06-04 04:47:31,862 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 00:47:50] 2025-06-04 04:47:31,862 | INFO     | job 6666849813 has completed (purged errors)
[2025-06-04 00:47:50] 2025-06-04 04:47:31,862 | INFO     | overall cleanup function is called
[2025-06-04 00:47:50] 2025-06-04 04:47:32,870 | INFO     | --- collectZombieJob: --- 10, [1435012]
[2025-06-04 00:47:50] 2025-06-04 04:47:32,871 | INFO     | zombie collector waiting for pid 1435012
[2025-06-04 00:47:50] 2025-06-04 04:47:32,871 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 00:47:50] 2025-06-04 04:47:32,871 | INFO     | collected zombie processes
[2025-06-04 00:47:50] 2025-06-04 04:47:32,871 | INFO     | will attempt to kill all subprocesses of pid=1435012
[2025-06-04 00:47:50] 2025-06-04 04:47:33,066 | INFO     | process IDs to be killed: [1435012] (in reverse order)
[2025-06-04 00:47:50] 2025-06-04 04:47:33,139 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 00:47:50] 2025-06-04 04:47:33,140 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 00:47:50] 2025-06-04 04:47:33,148 | INFO     | did not find any defunct processes belonging to 1435012
[2025-06-04 00:47:50] 2025-06-04 04:47:33,157 | INFO     | did not find any defunct processes belonging to 1435012
[2025-06-04 00:47:50] 2025-06-04 04:47:33,157 | INFO     | ready for new job
[2025-06-04 00:47:50] 2025-06-04 04:47:33,157 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 00:47:50] 2025-06-04 04:47:33,159 | INFO     | **************************************
[2025-06-04 00:47:50] 2025-06-04 04:47:33,159 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 00:47:50] 2025-06-04 04:47:33,159 | INFO     | **************************************
[2025-06-04 00:47:50] 2025-06-04 04:47:33,159 | INFO     | 
[2025-06-04 00:47:50] 2025-06-04 04:47:33,175 | INFO     | architecture information:
[2025-06-04 00:47:50] 2025-06-04 04:47:33,175 | INFO     | executing command: cat /etc/os-release
[2025-06-04 00:47:50] 2025-06-04 04:47:33,190 | INFO     | cat /etc/os-release:
[2025-06-04 00:47:50] NAME="CentOS Linux"
[2025-06-04 00:47:50] VERSION="7 (Core)"
[2025-06-04 00:47:50] ID="centos"
[2025-06-04 00:47:50] ID_LIKE="rhel fedora"
[2025-06-04 00:47:50] VERSION_ID="7"
[2025-06-04 00:47:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 00:47:50] ANSI_COLOR="0;31"
[2025-06-04 00:47:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 00:47:50] HOME_URL="https://www.centos.org/"
[2025-06-04 00:47:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 00:47:50] 
[2025-06-04 00:47:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 00:47:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 00:47:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 00:47:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 00:47:50] 
[2025-06-04 00:47:50] 2025-06-04 04:47:33,191 | INFO     | **************************************
[2025-06-04 00:47:50] 2025-06-04 04:47:33,694 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 00:47:50] 2025-06-04 04:47:33,712 | INFO     | sufficient remaining disk space (76261883904 B)
[2025-06-04 00:47:50] 2025-06-04 04:47:33,712 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 00:47:50] 2025-06-04 04:47:33,712 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 00:47:50] 2025-06-04 04:47:33,712 | INFO     | update_server=False
[2025-06-04 00:47:50] 2025-06-04 04:47:33,712 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 00:47:50] 2025-06-04 04:47:34,036 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 00:47:50] 2025-06-04 04:47:34,036 | INFO     | aborting loop
[2025-06-04 00:47:50] 2025-06-04 04:47:34,109 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 00:47:50] 2025-06-04 04:47:34,109 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 00:47:50] 2025-06-04 04:47:34,110 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 00:47:50] 2025-06-04 04:47:34,285 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 00:47:50] 2025-06-04 04:47:34,479 | INFO     | all job control threads have been joined
[2025-06-04 00:47:50] 2025-06-04 04:47:34,630 | INFO     | all data control threads have been joined
[2025-06-04 00:47:50] 2025-06-04 04:47:34,718 | INFO     | [job] retrieve thread has finished
[2025-06-04 00:47:50] 2025-06-04 04:47:35,042 | INFO     | [job] job monitor thread has finished
[2025-06-04 00:47:50] 2025-06-04 04:47:35,080 | INFO     | all payload control threads have been joined
[2025-06-04 00:47:50] 2025-06-04 04:47:35,189 | INFO     | [payload] validate_post thread has finished
[2025-06-04 00:47:50] 2025-06-04 04:47:35,282 | INFO     | [data] copytool_in thread has finished
[2025-06-04 00:47:50] 2025-06-04 04:47:35,484 | INFO     | [job] control thread has finished
[2025-06-04 00:47:50] 2025-06-04 04:47:35,534 | INFO     | [payload] failed_post thread has finished
[2025-06-04 00:47:50] 2025-06-04 04:47:35,635 | INFO     | [data] control thread has finished
[2025-06-04 00:47:50] 2025-06-04 04:47:35,728 | INFO     | [job] validate thread has finished
[2025-06-04 00:47:50] 2025-06-04 04:47:35,847 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 00:47:50] 2025-06-04 04:47:35,907 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 00:47:50] 2025-06-04 04:47:35,935 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 00:47:50] 2025-06-04 04:47:36,085 | INFO     | [payload] control thread has finished
[2025-06-04 00:47:50] 2025-06-04 04:47:36,152 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 00:47:50] 2025-06-04 04:47:36,290 | INFO     | [data] copytool_out thread has finished
[2025-06-04 00:47:50] 2025-06-04 04:47:36,534 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 00:47:50] 2025-06-04 04:47:37,540 | INFO     | [job] queue monitor thread has finished
[2025-06-04 00:47:50] 2025-06-04 04:47:39,853 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 00:47:50] 2025-06-04 04:47:43,920 | INFO     | job.realtimelogging is not enabled
[2025-06-04 00:47:50] 2025-06-04 04:47:44,925 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 00:47:50] 2025-06-04 04:47:45,124 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140177423554368)>', '<ExcThread(monitor, started 140176785401600)>']
[2025-06-04 00:47:50] 2025-06-04 04:47:45,165 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 00:47:50] 2025-06-04 04:47:45,165 | INFO     | [monitor] control thread has ended
[2025-06-04 00:47:50] 2025-06-04 04:47:50,150 | INFO     | all workflow threads have been joined
[2025-06-04 00:47:50] 2025-06-04 04:47:50,150 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 00:47:50] 2025-06-04 04:47:50,150 | INFO     | traces error code: 0
[2025-06-04 00:47:50] 2025-06-04 04:47:50,150 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 00:47:50] 2025-06-04 04:47:50,294 [wrapper] ==== pilot stdout END ====
[2025-06-04 00:47:50] 2025-06-04 04:47:50,297 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 00:47:50] 2025-06-04 04:47:50,299 [wrapper] pilotpid: 1428455
[2025-06-04 00:47:50] 2025-06-04 04:47:50,300 [wrapper] Pilot exit status: 0
[2025-06-04 00:47:50] 2025-06-04 04:47:50,308 [wrapper] pandaids: 6666849813
[2025-06-04 00:47:50] 2025-06-04 04:47:50,357 [wrapper] cleanup supervisor_pilot 1570070 1428456
[2025-06-04 00:47:50] 2025-06-04 04:47:50,360 [wrapper] Test setup, not cleaning
[2025-06-04 00:47:50] 2025-06-04 04:47:50,364 [wrapper] apfmon messages muted
[2025-06-04 00:47:50] 2025-06-04 04:47:50,367 [wrapper] ==== wrapper stdout END ====
[2025-06-04 00:47:50] 2025-06-04 04:47:50,370 [wrapper] ==== wrapper stderr END ====
[2025-06-04 00:47:50]  *** Error codes and diagnostics ***
[2025-06-04 00:47:50]     "exeErrorCode": 0,
[2025-06-04 00:47:50]     "exeErrorDiag": "",
[2025-06-04 00:47:50]     "pilotErrorCode": 0,
[2025-06-04 00:47:50]     "pilotErrorDiag": "",
[2025-06-04 00:47:50]  *** Listing of results directory ***
[2025-06-04 00:47:50] total 412968
[2025-06-04 00:47:50] -rw-r--r--. 1 boincer umatlas    495897 May 27 03:30 pilot3.tar.gz
[2025-06-04 00:47:50] -rw-r--r--. 1 boincer umatlas      5111 May 27 03:41 queuedata.json
[2025-06-04 00:47:50] -rwx------. 1 boincer umatlas     37140 May 27 03:43 runpilot2-wrapper.sh
[2025-06-04 00:47:50] -rw-r--r--. 1 boincer umatlas       100 Jun  3 23:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 00:47:50] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 23:38 run_atlas
[2025-06-04 00:47:50] -rw-r--r--. 1 boincer umatlas       105 Jun  3 23:38 job.xml
[2025-06-04 00:47:50] -rw-r--r--. 2 boincer umatlas 222298192 Jun  3 23:38 EVNT.44871834._002529.pool.root.1
[2025-06-04 00:47:50] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 23:38 start_atlas.sh
[2025-06-04 00:47:50] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 23:38 shared
[2025-06-04 00:47:50] -rw-r--r--. 2 boincer umatlas    508882 Jun  3 23:38 input.tar.gz
[2025-06-04 00:47:50] -rw-r--r--. 1 boincer umatlas         0 Jun  3 23:38 boinc_lockfile
[2025-06-04 00:47:50] -rw-r--r--. 1 boincer umatlas      2558 Jun  3 23:38 pandaJob.out
[2025-06-04 00:47:50] -rw-------. 1 boincer umatlas    986077 Jun  3 23:38 agis_schedconf.cvmfs.json
[2025-06-04 00:47:50] -rw-------. 1 boincer umatlas   1603667 Jun  3 23:38 agis_ddmendpoints.agis.ALL.json
[2025-06-04 00:47:50] drwx------. 4 boincer umatlas      4096 Jun  3 23:38 pilot3
[2025-06-04 00:47:50] -rw-r--r--. 1 boincer umatlas      6839 Jun  4 00:38 init_data.xml
[2025-06-04 00:47:50] -rw-------. 1 boincer umatlas        95 Jun  4 00:46 pilot_heartbeat.json
[2025-06-04 00:47:50] -rw-------. 1 boincer umatlas 195203212 Jun  4 00:46 HITS.44871837._064178.pool.root.1
[2025-06-04 00:47:50] -rw-r--r--. 1 boincer umatlas       529 Jun  4 00:46 boinc_task_state.xml
[2025-06-04 00:47:50] -rw-------. 1 boincer umatlas      1042 Jun  4 00:47 memory_monitor_summary.json
[2025-06-04 00:47:50] -rw-------. 1 boincer umatlas    353513 Jun  4 00:47 log.44871837._064178.job.log.tgz.1
[2025-06-04 00:47:50] -rw-------. 1 boincer umatlas      7715 Jun  4 00:47 heartbeat.json
[2025-06-04 00:47:50] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 00:47 boinc_mmap_file
[2025-06-04 00:47:50] -rw-r--r--. 1 boincer umatlas        27 Jun  4 00:47 wrapper_checkpoint.txt
[2025-06-04 00:47:50] -rw-------. 1 boincer umatlas      4425 Jun  4 00:47 pilotlog.txt
[2025-06-04 00:47:50] -rw-------. 1 boincer umatlas    416940 Jun  4 00:47 log.44871837._064178.job.log.1
[2025-06-04 00:47:50] -rw-------. 1 boincer umatlas       357 Jun  4 00:47 output.list
[2025-06-04 00:47:50] -rw-r--r--. 1 boincer umatlas       620 Jun  4 00:47 runtime_log
[2025-06-04 00:47:50] -rw-------. 1 boincer umatlas    788480 Jun  4 00:47 result.tar.gz
[2025-06-04 00:47:50] -rw-------. 1 boincer umatlas       652 Jun  4 00:47 s01LDmD93d7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyrYKDms874Xn.diag
[2025-06-04 00:47:50] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 00:47 runtime_log.err
[2025-06-04 00:47:50] -rw-r--r--. 1 boincer umatlas     21280 Jun  4 00:47 stderr.txt
[2025-06-04 00:47:50] HITS file was successfully produced:
[2025-06-04 00:47:50] -rw-------. 1 boincer umatlas 195203212 Jun  4 00:46 shared/HITS.pool.root.1
[2025-06-04 00:47:50]  *** Contents of shared directory: ***
[2025-06-04 00:47:50] total 409016
[2025-06-04 00:47:50] -rw-r--r--. 2 boincer umatlas 222298192 Jun  3 23:38 ATLAS.root_0
[2025-06-04 00:47:50] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 23:38 start_atlas.sh
[2025-06-04 00:47:50] -rw-r--r--. 2 boincer umatlas    508882 Jun  3 23:38 input.tar.gz
[2025-06-04 00:47:50] -rw-------. 1 boincer umatlas 195203212 Jun  4 00:46 HITS.pool.root.1
[2025-06-04 00:47:50] -rw-------. 1 boincer umatlas    788480 Jun  4 00:47 result.tar.gz
00:47:52 (1424821): run_atlas exited; CPU time 40889.151380
00:47:52 (1424821): called boinc_finish(0)

</stderr_txt>
]]>

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