Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:26:10 (4054672): wrapper (7.7.26015): starting
14:26:10 (4054672): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 14:26:10] Arguments: --nthreads 4
[2025-06-05 14:26:10] Threads: 4
[2025-06-05 14:26:10] Checking for CVMFS
[2025-06-05 14:26:10] No cvmfs_config command found, will try listing directly
[2025-06-05 14:26:10] CVMFS is ok
[2025-06-05 14:26:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 14:26:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 14:26:10] Further information can be found at the LHC@home message board.
[2025-06-05 14:26:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 14:26:10] Checking for apptainer binary...
[2025-06-05 14:26:10] which: no apptainer in ((null))
[2025-06-05 14:26:10] apptainer is not installed, using version from CVMFS
[2025-06-05 14:26:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 14:26:10] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut33.grid.cesnet.cz
[2025-06-05 14:26:10] apptainer works
[2025-06-05 14:26:10] Set ATHENA_PROC_NUMBER=4
[2025-06-05 14:26:10] Set ATHENA_CORE_NUMBER=4
[2025-06-05 14:26:10] Starting ATLAS job with PandaID=6678150180
[2025-06-05 14:26:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 17:51:58]  *** The last 200 lines of the pilot log: ***
[2025-06-05 17:51:58] 2025-06-05 15:50:02,210 | INFO     | total number of processed events: 400 (read)
[2025-06-05 17:51:58] 2025-06-05 15:50:02,213 | INFO     | executing command: lscpu
[2025-06-05 17:51:58] 2025-06-05 15:50:02,262 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 17:51:58] 2025-06-05 15:50:02,288 | INFO     | monitor loop #895: job 0:6678150180 is in state 'finished'
[2025-06-05 17:51:58] 2025-06-05 15:50:02,288 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:51:58] 2025-06-05 15:50:04,791 | INFO     | monitor loop #896: job 0:6678150180 is in state 'finished'
[2025-06-05 17:51:58] 2025-06-05 15:50:04,792 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 17:51:58] 2025-06-05 15:50:05,921 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 17:51:58] 2025-06-05 15:50:05,922 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6678150180/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 17:51:58] 2025-06-05 15:50:05,923 | INFO     | extracted standard info from prmon json
[2025-06-05 17:51:58] 2025-06-05 15:50:05,923 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 17:51:58] 2025-06-05 15:50:05,923 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 17:51:58] 2025-06-05 15:50:05,924 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 17:51:58] 2025-06-05 15:50:05,924 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 17:51:58] 2025-06-05 15:50:05,929 | INFO     | fitting pss+swap vs Time
[2025-06-05 17:51:58] 2025-06-05 15:50:05,930 | INFO     | sum of square deviations: 2480604650.0
[2025-06-05 17:51:58] 2025-06-05 15:50:05,932 | INFO     | sum of deviations: -39637827602.49999
[2025-06-05 17:51:58] 2025-06-05 15:50:05,932 | INFO     | mean x: 1749132474.5
[2025-06-05 17:51:58] 2025-06-05 15:50:05,932 | INFO     | mean y: 2395150.675
[2025-06-05 17:51:58] 2025-06-05 15:50:05,932 | INFO     | -- intersect: 27951956350.66921
[2025-06-05 17:51:58] 2025-06-05 15:50:05,932 | INFO     | intersect: 27951956350.66921
[2025-06-05 17:51:58] 2025-06-05 15:50:05,933 | INFO     | chi2: 1.9500265475051595
[2025-06-05 17:51:58] 2025-06-05 15:50:05,933 | INFO     | sum of square deviations: 2299168690.0
[2025-06-05 17:51:58] 2025-06-05 15:50:05,935 | INFO     | sum of deviations: -38151723673.00001
[2025-06-05 17:51:58] 2025-06-05 15:50:05,935 | INFO     | mean x: 1749132322.0
[2025-06-05 17:51:58] 2025-06-05 15:50:05,935 | INFO     | mean y: 2396400.0256410255
[2025-06-05 17:51:58] 2025-06-05 15:50:05,935 | INFO     | -- intersect: 29026979636.0025
[2025-06-05 17:51:58] 2025-06-05 15:50:05,935 | INFO     | intersect: 29026979636.0025
[2025-06-05 17:51:58] 2025-06-05 15:50:05,936 | INFO     | chi2: 1.9445238641048004
[2025-06-05 17:51:58] 2025-06-05 15:50:05,936 | INFO     | current chi2=1.9445238641048004 (change=0.2821850506291391 %)
[2025-06-05 17:51:58] 2025-06-05 15:50:05,936 | INFO     | right removable region: 194
[2025-06-05 17:51:58] 2025-06-05 15:50:05,936 | INFO     | sum of square deviations: 2299168690.0
[2025-06-05 17:51:58] 2025-06-05 15:50:05,938 | INFO     | sum of deviations: -69968536528.99998
[2025-06-05 17:51:58] 2025-06-05 15:50:05,938 | INFO     | mean x: 1749132627.0
[2025-06-05 17:51:58] 2025-06-05 15:50:05,938 | INFO     | mean y: 2420364.825641026
[2025-06-05 17:51:58] 2025-06-05 15:50:05,938 | INFO     | -- intersect: 53232203215.73737
[2025-06-05 17:51:58] 2025-06-05 15:50:05,938 | INFO     | intersect: 53232203215.73737
[2025-06-05 17:51:58] 2025-06-05 15:50:05,939 | INFO     | chi2: 0.35855701386034455
[2025-06-05 17:51:58] 2025-06-05 15:50:05,939 | INFO     | current chi2=0.35855701386034455 (change=81.61271115415953 %)
[2025-06-05 17:51:58] 2025-06-05 15:50:05,939 | INFO     | sum of square deviations: 2126802667.5
[2025-06-05 17:51:58] 2025-06-05 15:50:05,941 | INFO     | sum of deviations: -62822839820.00001
[2025-06-05 17:51:58] 2025-06-05 15:50:05,941 | INFO     | mean x: 1749132779.5
[2025-06-05 17:51:58] 2025-06-05 15:50:05,941 | INFO     | mean y: 2414018.1052631577
[2025-06-05 17:51:58] 2025-06-05 15:50:05,941 | INFO     | -- intersect: 51669402267.46992
[2025-06-05 17:51:58] 2025-06-05 15:50:05,941 | INFO     | intersect: 51669402267.46992
[2025-06-05 17:51:58] 2025-06-05 15:50:05,942 | INFO     | chi2: 0.3506691904070965
[2025-06-05 17:51:58] 2025-06-05 15:50:05,942 | INFO     | current chi2=0.3506691904070965 (change=2.1998798373305055 %)
[2025-06-05 17:51:58] 2025-06-05 15:50:05,942 | INFO     | left removable region: 20
[2025-06-05 17:51:58] 2025-06-05 15:50:05,942 | INFO     | sum of square deviations: 1633472487.5
[2025-06-05 17:51:58] 2025-06-05 15:50:05,943 | INFO     | sum of deviations: -43084456404.0
[2025-06-05 17:51:58] 2025-06-05 15:50:05,944 | INFO     | mean x: 1749132901.5
[2025-06-05 17:51:58] 2025-06-05 15:50:05,944 | INFO     | mean y: 2398404.5057471264
[2025-06-05 17:51:58] 2025-06-05 15:50:05,944 | INFO     | -- intersect: 46137512902.09766
[2025-06-05 17:51:58] 2025-06-05 15:50:05,944 | INFO     | intersect: 46137512902.09766
[2025-06-05 17:51:58] 2025-06-05 15:50:05,944 | INFO     | chi2: 0.3006226035968852
[2025-06-05 17:51:58] 2025-06-05 15:50:05,945 | INFO     | -- intersect: 46137512902.09766
[2025-06-05 17:51:58] 2025-06-05 15:50:05,945 | INFO     | current memory leak: -26.38 B/s (using 174 data points, chi2=0.30)
[2025-06-05 17:51:58] 2025-06-05 15:50:05,946 | INFO     | ..............................
[2025-06-05 17:51:58] 2025-06-05 15:50:05,946 | INFO     | . Timing measurements:
[2025-06-05 17:51:58] 2025-06-05 15:50:05,946 | INFO     | . get job = 0 s
[2025-06-05 17:51:58] 2025-06-05 15:50:05,946 | INFO     | . initial setup = 1 s
[2025-06-05 17:51:58] 2025-06-05 15:50:05,946 | INFO     | . payload setup = 6 s
[2025-06-05 17:51:58] 2025-06-05 15:50:05,946 | INFO     | . stage-in = 0 s
[2025-06-05 17:51:58] 2025-06-05 15:50:05,946 | INFO     | . payload execution = 12195 s
[2025-06-05 17:51:58] 2025-06-05 15:50:05,946 | INFO     | . stage-out = 1 s
[2025-06-05 17:51:58] 2025-06-05 15:50:05,947 | INFO     | . log creation = 0 s
[2025-06-05 17:51:58] 2025-06-05 15:50:05,947 | INFO     | ..............................
[2025-06-05 17:51:58] 2025-06-05 15:50:06,061 | INFO     | 
[2025-06-05 17:51:58] 2025-06-05 15:50:06,061 | INFO     | job summary report
[2025-06-05 17:51:58] 2025-06-05 15:50:06,061 | INFO     | --------------------------------------------------
[2025-06-05 17:51:58] 2025-06-05 15:50:06,061 | INFO     | PanDA job id: 6678150180
[2025-06-05 17:51:58] 2025-06-05 15:50:06,061 | INFO     | task id: 45006595
[2025-06-05 17:51:58] 2025-06-05 15:50:06,061 | INFO     | errors: (none)
[2025-06-05 17:51:58] 2025-06-05 15:50:06,061 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 17:51:58] 2025-06-05 15:50:06,062 | INFO     | pilot state: finished 
[2025-06-05 17:51:58] 2025-06-05 15:50:06,062 | INFO     | transexitcode: 0
[2025-06-05 17:51:58] 2025-06-05 15:50:06,062 | INFO     | exeerrorcode: 0
[2025-06-05 17:51:58] 2025-06-05 15:50:06,062 | INFO     | exeerrordiag: 
[2025-06-05 17:51:58] 2025-06-05 15:50:06,062 | INFO     | exitcode: 0
[2025-06-05 17:51:58] 2025-06-05 15:50:06,062 | INFO     | exitmsg: OK
[2025-06-05 17:51:58] 2025-06-05 15:50:06,062 | INFO     | cpuconsumptiontime: 46632 s
[2025-06-05 17:51:58] 2025-06-05 15:50:06,062 | INFO     | nevents: 400
[2025-06-05 17:51:58] 2025-06-05 15:50:06,062 | INFO     | neventsw: 0
[2025-06-05 17:51:58] 2025-06-05 15:50:06,062 | INFO     | pid: 4065268
[2025-06-05 17:51:58] 2025-06-05 15:50:06,063 | INFO     | pgrp: 4065268
[2025-06-05 17:51:58] 2025-06-05 15:50:06,063 | INFO     | corecount: 4
[2025-06-05 17:51:58] 2025-06-05 15:50:06,063 | INFO     | event service: False
[2025-06-05 17:51:58] 2025-06-05 15:50:06,063 | INFO     | sizes: {0: 2397182, 1: 2397381, 5: 2397587, 12: 2397643, 12206: 2427070, 12208: 2436217, 12212: 2436331}
[2025-06-05 17:51:58] 2025-06-05 15:50:06,063 | INFO     | --------------------------------------------------
[2025-06-05 17:51:58] 2025-06-05 15:50:06,063 | INFO     | 
[2025-06-05 17:51:58] 2025-06-05 15:50:06,063 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2025-06-05 17:51:58] 2025-06-05 15:50:06,083 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 17:51:58] 2025-06-05 15:50:06,084 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 17:51:58] 2025-06-05 15:50:06,084 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 17:51:58] 2025-06-05 15:50:06,084 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 17:51:58] 2025-06-05 15:50:06,084 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 17:51:58] 2025-06-05 15:50:06,084 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 17:51:58] 2025-06-05 15:50:06,084 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 17:51:58] 2025-06-05 15:50:06,085 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 17:51:58] 2025-06-05 15:50:06,085 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 17:51:58] 2025-06-05 15:50:06,085 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 17:51:58] 2025-06-05 15:50:06,085 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 17:51:58] 2025-06-05 15:50:06,085 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 17:51:58] 2025-06-05 15:50:06,085 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 17:51:58] 2025-06-05 15:50:06,085 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 17:51:58] 2025-06-05 15:50:06,085 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 17:51:58] 2025-06-05 15:50:06,086 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 17:51:58] 2025-06-05 15:50:06,086 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 17:51:58] 2025-06-05 15:50:06,086 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 17:51:58] 2025-06-05 15:50:06,086 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 17:51:58] 2025-06-05 15:50:06,086 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 17:51:58] 2025-06-05 15:50:06,086 | INFO     | job 6678150180 has completed (purged errors)
[2025-06-05 17:51:58] 2025-06-05 15:50:06,086 | INFO     | overall cleanup function is called
[2025-06-05 17:51:58] 2025-06-05 15:50:07,094 | INFO     | --- collectZombieJob: --- 10, [4065268]
[2025-06-05 17:51:58] 2025-06-05 15:50:07,095 | INFO     | zombie collector waiting for pid 4065268
[2025-06-05 17:51:58] 2025-06-05 15:50:07,095 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 17:51:58] 2025-06-05 15:50:07,095 | INFO     | collected zombie processes
[2025-06-05 17:51:58] 2025-06-05 15:50:07,095 | INFO     | will attempt to kill all subprocesses of pid=4065268
[2025-06-05 17:51:58] 2025-06-05 15:50:07,409 | INFO     | process IDs to be killed: [4065268] (in reverse order)
[2025-06-05 17:51:58] 2025-06-05 15:50:07,489 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 17:51:58] 2025-06-05 15:50:07,490 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 17:51:58] 2025-06-05 15:50:07,497 | INFO     | did not find any defunct processes belonging to 4065268
[2025-06-05 17:51:58] 2025-06-05 15:50:07,505 | INFO     | did not find any defunct processes belonging to 4065268
[2025-06-05 17:51:58] 2025-06-05 15:50:07,506 | INFO     | ready for new job
[2025-06-05 17:51:58] 2025-06-05 15:50:07,506 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 17:51:58] 2025-06-05 15:50:07,508 | INFO     | **************************************
[2025-06-05 17:51:58] 2025-06-05 15:50:07,508 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 17:51:58] 2025-06-05 15:50:07,508 | INFO     | **************************************
[2025-06-05 17:51:58] 2025-06-05 15:50:07,508 | INFO     | 
[2025-06-05 17:51:58] 2025-06-05 15:50:07,511 | INFO     | architecture information:
[2025-06-05 17:51:58] 2025-06-05 15:50:07,511 | INFO     | executing command: cat /etc/os-release
[2025-06-05 17:51:58] 2025-06-05 15:50:07,525 | INFO     | cat /etc/os-release:
[2025-06-05 17:51:58] NAME="CentOS Linux"
[2025-06-05 17:51:58] VERSION="7 (Core)"
[2025-06-05 17:51:58] ID="centos"
[2025-06-05 17:51:58] ID_LIKE="rhel fedora"
[2025-06-05 17:51:58] VERSION_ID="7"
[2025-06-05 17:51:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 17:51:58] ANSI_COLOR="0;31"
[2025-06-05 17:51:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 17:51:58] HOME_URL="https://www.centos.org/"
[2025-06-05 17:51:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 17:51:58] 
[2025-06-05 17:51:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 17:51:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 17:51:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 17:51:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 17:51:58] 
[2025-06-05 17:51:58] 2025-06-05 15:50:07,525 | INFO     | **************************************
[2025-06-05 17:51:58] 2025-06-05 15:50:08,028 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2025-06-05 17:51:58] 2025-06-05 15:50:08,041 | INFO     | sufficient remaining disk space (1664557776896 B)
[2025-06-05 17:51:58] 2025-06-05 15:50:08,042 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 17:51:58] 2025-06-05 15:50:08,042 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 17:51:58] 2025-06-05 15:50:08,042 | INFO     | update_server=False
[2025-06-05 17:51:58] 2025-06-05 15:50:08,042 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 17:51:58] 2025-06-05 15:50:08,042 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 17:51:58] 2025-06-05 15:50:08,043 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:51:58] 2025-06-05 15:50:08,043 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 17:51:58] 2025-06-05 15:50:08,043 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 17:51:58] 2025-06-05 15:50:08,044 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 17:51:58] 2025-06-05 15:50:08,044 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 17:51:58] 2025-06-05 15:50:08,214 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 17:51:58] 2025-06-05 15:50:08,245 | INFO     | all job control threads have been joined
[2025-06-05 17:51:58] 2025-06-05 15:50:08,299 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 17:51:58] 2025-06-05 15:50:08,300 | INFO     | aborting loop
[2025-06-05 17:51:58] 2025-06-05 15:50:08,361 | INFO     | all data control threads have been joined
[2025-06-05 17:51:58] 2025-06-05 15:50:08,444 | INFO     | all payload control threads have been joined
[2025-06-05 17:51:58] 2025-06-05 15:50:09,045 | INFO     | [job] retrieve thread has finished
[2025-06-05 17:51:58] 2025-06-05 15:50:09,048 | INFO     | [job] queue monitor thread has finished
[2025-06-05 17:51:58] 2025-06-05 15:50:09,110 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 17:51:58] 2025-06-05 15:50:09,250 | INFO     | [job] control thread has finished
[2025-06-05 17:51:58] 2025-06-05 15:50:09,305 | INFO     | [job] job monitor thread has finished
[2025-06-05 17:51:58] 2025-06-05 15:50:09,367 | INFO     | [data] control thread has finished
[2025-06-05 17:51:58] 2025-06-05 15:50:09,390 | INFO     | [payload] validate_post thread has finished
[2025-06-05 17:51:58] 2025-06-05 15:50:09,450 | INFO     | [payload] control thread has finished
[2025-06-05 17:51:58] 2025-06-05 15:50:09,620 | INFO     | [data] copytool_in thread has finished
[2025-06-05 17:51:58] 2025-06-05 15:50:09,620 | INFO     | [job] validate thread has finished
[2025-06-05 17:51:58] 2025-06-05 15:50:09,723 | INFO     | [payload] failed_post thread has finished
[2025-06-05 17:51:58] 2025-06-05 15:50:09,886 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 17:51:58] 2025-06-05 15:50:10,045 | INFO     | [data] copytool_out thread has finished
[2025-06-05 17:51:58] 2025-06-05 15:50:10,281 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 17:51:58] 2025-06-05 15:50:10,338 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 17:51:58] 2025-06-05 15:50:12,218 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 17:51:58] 2025-06-05 15:50:12,807 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23411284600640)>', '<ExcThread(monitor, started 23411040409344)>']
[2025-06-05 17:51:58] 2025-06-05 15:50:13,068 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 17:51:58] 2025-06-05 15:50:13,069 | INFO     | [monitor] control thread has ended
[2025-06-05 17:51:58] 2025-06-05 15:50:17,809 | INFO     | all workflow threads have been joined
[2025-06-05 17:51:58] 2025-06-05 15:50:17,809 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 17:51:58] 2025-06-05 15:50:17,810 | INFO     | traces error code: 0
[2025-06-05 17:51:58] 2025-06-05 15:50:17,810 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 17:51:58] 2025-06-05 15:50:17,972 [wrapper] ==== pilot stdout END ====
[2025-06-05 17:51:58] 2025-06-05 15:50:17,975 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 17:51:58] 2025-06-05 15:50:17,978 [wrapper] pilotpid: 4058250
[2025-06-05 17:51:58] 2025-06-05 15:50:17,981 [wrapper] Pilot exit status: 0
[2025-06-05 17:51:58] 2025-06-05 15:50:17,993 [wrapper] pandaids: 6678150180
[2025-06-05 17:51:58] 2025-06-05 15:50:18,049 [wrapper] cleanup supervisor_pilot   65751 4058251
[2025-06-05 17:51:58] 2025-06-05 15:50:18,052 [wrapper] Test setup, not cleaning
[2025-06-05 17:51:58] 2025-06-05 15:50:18,054 [wrapper] apfmon messages muted
[2025-06-05 17:51:58] 2025-06-05 15:50:18,057 [wrapper] ==== wrapper stdout END ====
[2025-06-05 17:51:58] 2025-06-05 15:50:18,060 [wrapper] ==== wrapper stderr END ====
[2025-06-05 17:51:58]  *** Error codes and diagnostics ***
[2025-06-05 17:51:58]     "exeErrorCode": 0,
[2025-06-05 17:51:58]     "exeErrorDiag": "",
[2025-06-05 17:51:58]     "pilotErrorCode": 0,
[2025-06-05 17:51:58]     "pilotErrorDiag": "",
[2025-06-05 17:51:58]  *** Listing of results directory ***
[2025-06-05 17:51:58] total 395840
[2025-06-05 17:51:58] -rw-r--r-- 1 boinc boinc    495897 Jun  3 23:57 pilot3.tar.gz
[2025-06-05 17:51:58] -rwx------ 1 boinc boinc     37140 Jun  4 00:00 runpilot2-wrapper.sh
[2025-06-05 17:51:58] -rw-r--r-- 1 boinc boinc      5111 Jun  4 00:00 queuedata.json
[2025-06-05 17:51:58] -rw-r--r-- 1 boinc boinc       100 Jun  5 14:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 17:51:58] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 14:26 run_atlas
[2025-06-05 17:51:58] -rw-r--r-- 1 boinc boinc       105 Jun  5 14:26 job.xml
[2025-06-05 17:51:58] -rw-r--r-- 2 boinc boinc 215337275 Jun  5 14:26 EVNT.45006593._001871.pool.root.1
[2025-06-05 17:51:58] -rw-r--r-- 1 boinc boinc      6421 Jun  5 14:26 init_data.xml
[2025-06-05 17:51:58] -rw-r--r-- 2 boinc boinc     15093 Jun  5 14:26 start_atlas.sh
[2025-06-05 17:51:58] drwxrwx--x 2 boinc boinc      4096 Jun  5 14:26 shared
[2025-06-05 17:51:58] -rw-r--r-- 2 boinc boinc    508880 Jun  5 14:26 input.tar.gz
[2025-06-05 17:51:58] -rw-r--r-- 1 boinc boinc         0 Jun  5 14:26 boinc_lockfile
[2025-06-05 17:51:58] -rw-r--r-- 1 boinc boinc      2525 Jun  5 14:26 pandaJob.out
[2025-06-05 17:51:58] -rw------- 1 boinc boinc    983210 Jun  5 14:26 agis_schedconf.cvmfs.json
[2025-06-05 17:51:58] drwx------ 4 boinc boinc      4096 Jun  5 14:26 pilot3
[2025-06-05 17:51:58] -rw------- 1 boinc boinc 183220354 Jun  5 17:49 HITS.45006595._046679.pool.root.1
[2025-06-05 17:51:58] -rw-r--r-- 1 boinc boinc       528 Jun  5 17:49 boinc_task_state.xml
[2025-06-05 17:51:58] -rw------- 1 boinc boinc        95 Jun  5 17:49 pilot_heartbeat.json
[2025-06-05 17:51:58] -rw------- 1 boinc boinc      1037 Jun  5 17:49 memory_monitor_summary.json
[2025-06-05 17:51:58] -rw------- 1 boinc boinc   1598969 Jun  5 17:50 agis_ddmendpoints.agis.ALL.json
[2025-06-05 17:51:58] -rw------- 1 boinc boinc    327377 Jun  5 17:50 log.45006595._046679.job.log.tgz.1
[2025-06-05 17:51:58] -rw------- 1 boinc boinc      7735 Jun  5 17:50 heartbeat.json
[2025-06-05 17:51:58] -rw------- 1 boinc boinc      4487 Jun  5 17:50 pilotlog.txt
[2025-06-05 17:51:58] -rw------- 1 boinc boinc   1146969 Jun  5 17:50 log.45006595._046679.job.log.1
[2025-06-05 17:51:58] -rw------- 1 boinc boinc       357 Jun  5 17:50 output.list
[2025-06-05 17:51:58] -rw-r--r-- 1 boinc boinc       620 Jun  5 17:50 runtime_log
[2025-06-05 17:51:58] -rw------- 1 boinc boinc   1495040 Jun  5 17:50 result.tar.gz
[2025-06-05 17:51:58] -rw-r--r-- 1 boinc boinc      9026 Jun  5 17:50 runtime_log.err
[2025-06-05 17:51:58] -rw------- 1 boinc boinc       666 Jun  5 17:50 CiBODmRrog7n9Rq4apOajLDm4fhM0noT9bVof3QYDmI6ZKDmKoTPsm.diag
[2025-06-05 17:51:58] -rw-r--r-- 1 boinc boinc        26 Jun  5 17:51 wrapper_checkpoint.txt
[2025-06-05 17:51:58] -rw-r--r-- 1 boinc boinc      8192 Jun  5 17:51 boinc_mmap_file
[2025-06-05 17:51:58] -rw-r--r-- 1 boinc boinc     20909 Jun  5 17:51 stderr.txt
[2025-06-05 17:51:58] HITS file was successfully produced:
[2025-06-05 17:51:58] -rw------- 1 boinc boinc 183220354 Jun  5 17:49 shared/HITS.pool.root.1
[2025-06-05 17:51:58]  *** Contents of shared directory: ***
[2025-06-05 17:51:58] total 391204
[2025-06-05 17:51:58] -rw-r--r-- 2 boinc boinc 215337275 Jun  5 14:26 ATLAS.root_0
[2025-06-05 17:51:58] -rw-r--r-- 2 boinc boinc     15093 Jun  5 14:26 start_atlas.sh
[2025-06-05 17:51:58] -rw-r--r-- 2 boinc boinc    508880 Jun  5 14:26 input.tar.gz
[2025-06-05 17:51:58] -rw------- 1 boinc boinc 183220354 Jun  5 17:49 HITS.pool.root.1
[2025-06-05 17:51:58] -rw------- 1 boinc boinc   1495040 Jun  5 17:50 result.tar.gz
17:52:00 (4054672): run_atlas exited; CPU time 47080.713901
17:52:00 (4054672): called boinc_finish(0)

</stderr_txt>
]]>

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