Stderr output

<core_client_version>8.2.1</core_client_version>
<![CDATA[
<stderr_txt>
13:07:44 (1210801): wrapper (7.7.26015): starting
13:07:44 (1210801): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 13:07:44] Arguments: --nthreads 4
[2025-06-04 13:07:44] Threads: 4
[2025-06-04 13:07:44] Checking for CVMFS
[2025-06-04 13:07:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 13:07:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 13:07:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 13:07:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 13:07:44] 2.12.7.0 14849 22367 46012 146775 0 56 33532337 33554433 0 130560 0 10139629 99.990 3030389 2095 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2025-06-04 13:07:44] CVMFS is ok
[2025-06-04 13:07:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 13:07:44] Checking for apptainer binary...
[2025-06-04 13:07:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 13:07:44] Running /usr/bin/apptainer --version
[2025-06-04 13:07:44] apptainer version 1.4.0
[2025-06-04 13:07:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 13:07:44] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2025-06-04 13:07:44] apptainer works
[2025-06-04 13:07:44] Set ATHENA_PROC_NUMBER=4
[2025-06-04 13:07:44] Set ATHENA_CORE_NUMBER=4
[2025-06-04 13:07:44] Starting ATLAS job with PandaID=6667202729
[2025-06-04 13:07:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:29:46]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:29:46]  guid=2e4769db-7b98-457d-a231-1a65971e7d8d
[2025-06-04 14:29:46]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 14:29:46]  is_altstaged=None
[2025-06-04 14:29:46]  is_tar=False
[2025-06-04 14:29:46]  lfn=log.44871837._069706.job.log.tgz.1
[2025-06-04 14:29:46]  mtime=0
[2025-06-04 14:29:46]  protocol_id=None
[2025-06-04 14:29:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 14:29:46]  replicas=None
[2025-06-04 14:29:46]  scope=mc23_13p6TeV
[2025-06-04 14:29:46]  status=None
[2025-06-04 14:29:46]  status_code=0
[2025-06-04 14:29:46]  storage_token=
[2025-06-04 14:29:46]  surl=/home/ek/BOINC/slots/1/PanDA_Pilot-6667202729/log.44871837._069706.job.log.tgz.1
[2025-06-04 14:29:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/ee/log.44871837._069706.job.log.tgz.1
[2025-06-04 14:29:46]  workdir=None
[2025-06-04 14:29:46] ]
[2025-06-04 14:29:46] 2025-06-04 11:29:24,079 | INFO     | transferring file log.44871837._069706.job.log.tgz.1 from /home/ek/BOINC/slots/1/PanDA_Pilot-6667202729/log.44871837._069706.job.log.tgz.1 to /home/ek/BOINC/slots/
[2025-06-04 14:29:46] 2025-06-04 11:29:24,079 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/1/PanDA_Pilot-6667202729/log.44871837._069706.job.log.tgz.1 /home/ek/BOINC/slots/1/log.44871837._069706.job
[2025-06-04 14:29:46] 2025-06-04 11:29:24,089 | INFO     | adding to output.list: log.44871837._069706.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/ee/log.44871837._069706.job.log.tg
[2025-06-04 14:29:46] 2025-06-04 11:29:24,089 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 14:29:46] 2025-06-04 11:29:24,089 | INFO     | summary of transferred files:
[2025-06-04 14:29:46] 2025-06-04 11:29:24,089 | INFO     |  -- lfn=log.44871837._069706.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 14:29:46] 2025-06-04 11:29:24,090 | INFO     | stage-out finished correctly
[2025-06-04 14:29:46] 2025-06-04 11:29:24,191 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 14:29:46] 2025-06-04 11:29:24,914 | INFO     | job 6667202729 has state=finished
[2025-06-04 14:29:46] 2025-06-04 11:29:24,915 | INFO     | preparing for final server update for job 6667202729 in state='finished'
[2025-06-04 14:29:46] 2025-06-04 11:29:24,915 | INFO     | this job has now completed (state=finished)
[2025-06-04 14:29:46] 2025-06-04 11:29:24,915 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 14:29:46] 2025-06-04 11:29:24,915 | INFO     | log transfer has been attempted: DONE
[2025-06-04 14:29:46] 2025-06-04 11:29:24,915 | INFO     | job 6667202729 has finished - writing final server update
[2025-06-04 14:29:46] 2025-06-04 11:29:24,915 | INFO     | total number of processed events: 400 (read)
[2025-06-04 14:29:46] 2025-06-04 11:29:24,916 | INFO     | executing command: lscpu
[2025-06-04 14:29:46] 2025-06-04 11:29:24,935 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 14:29:46] 2025-06-04 11:29:27,086 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 14:29:46] 2025-06-04 11:29:27,086 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6667202729/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:29:46] 2025-06-04 11:29:27,086 | INFO     | extracted standard info from prmon json
[2025-06-04 14:29:46] 2025-06-04 11:29:27,086 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 14:29:46] 2025-06-04 11:29:27,086 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:29:46] 2025-06-04 11:29:27,086 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:29:46] 2025-06-04 11:29:27,086 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:29:46] 2025-06-04 11:29:27,087 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:29:46] 2025-06-04 11:29:27,087 | INFO     | sum of square deviations: 120605052.0
[2025-06-04 14:29:46] 2025-06-04 11:29:27,087 | INFO     | sum of deviations: -10281853596.999998
[2025-06-04 14:29:46] 2025-06-04 11:29:27,087 | INFO     | mean x: 1749034193.0
[2025-06-04 14:29:46] 2025-06-04 11:29:27,088 | INFO     | mean y: 2452716.493150685
[2025-06-04 14:29:46] 2025-06-04 11:29:27,088 | INFO     | -- intersect: 149111575513.21515
[2025-06-04 14:29:46] 2025-06-04 11:29:27,088 | INFO     | intersect: 149111575513.21515
[2025-06-04 14:29:46] 2025-06-04 11:29:27,088 | INFO     | chi2: 0.15283986375768385
[2025-06-04 14:29:46] 2025-06-04 11:29:27,088 | INFO     | -- intersect: 149111575513.21515
[2025-06-04 14:29:46] 2025-06-04 11:29:27,088 | INFO     | current memory leak: -85.25 B/s (using 73 data points, chi2=0.15)
[2025-06-04 14:29:46] 2025-06-04 11:29:27,088 | INFO     | ..............................
[2025-06-04 14:29:46] 2025-06-04 11:29:27,088 | INFO     | . Timing measurements:
[2025-06-04 14:29:46] 2025-06-04 11:29:27,088 | INFO     | . get job = 0 s
[2025-06-04 14:29:46] 2025-06-04 11:29:27,088 | INFO     | . initial setup = 2 s
[2025-06-04 14:29:46] 2025-06-04 11:29:27,088 | INFO     | . payload setup = 3 s
[2025-06-04 14:29:46] 2025-06-04 11:29:27,088 | INFO     | . stage-in = 0 s
[2025-06-04 14:29:46] 2025-06-04 11:29:27,088 | INFO     | . payload execution = 4871 s
[2025-06-04 14:29:46] 2025-06-04 11:29:27,088 | INFO     | . stage-out = 0 s
[2025-06-04 14:29:46] 2025-06-04 11:29:27,088 | INFO     | . log creation = 0 s
[2025-06-04 14:29:46] 2025-06-04 11:29:27,088 | INFO     | ..............................
[2025-06-04 14:29:46] 2025-06-04 11:29:27,618 | INFO     | 
[2025-06-04 14:29:46] 2025-06-04 11:29:27,619 | INFO     | job summary report
[2025-06-04 14:29:46] 2025-06-04 11:29:27,619 | INFO     | --------------------------------------------------
[2025-06-04 14:29:46] 2025-06-04 11:29:27,619 | INFO     | PanDA job id: 6667202729
[2025-06-04 14:29:46] 2025-06-04 11:29:27,619 | INFO     | task id: 44871837
[2025-06-04 14:29:46] 2025-06-04 11:29:27,619 | INFO     | errors: (none)
[2025-06-04 14:29:46] 2025-06-04 11:29:27,619 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:29:46] 2025-06-04 11:29:27,619 | INFO     | pilot state: finished 
[2025-06-04 14:29:46] 2025-06-04 11:29:27,619 | INFO     | transexitcode: 0
[2025-06-04 14:29:46] 2025-06-04 11:29:27,619 | INFO     | exeerrorcode: 0
[2025-06-04 14:29:46] 2025-06-04 11:29:27,619 | INFO     | exeerrordiag: 
[2025-06-04 14:29:46] 2025-06-04 11:29:27,619 | INFO     | exitcode: 0
[2025-06-04 14:29:46] 2025-06-04 11:29:27,619 | INFO     | exitmsg: OK
[2025-06-04 14:29:46] 2025-06-04 11:29:27,619 | INFO     | cpuconsumptiontime: 18463 s
[2025-06-04 14:29:46] 2025-06-04 11:29:27,619 | INFO     | nevents: 400
[2025-06-04 14:29:46] 2025-06-04 11:29:27,619 | INFO     | neventsw: 0
[2025-06-04 14:29:46] 2025-06-04 11:29:27,619 | INFO     | pid: 1221528
[2025-06-04 14:29:46] 2025-06-04 11:29:27,619 | INFO     | pgrp: 1221528
[2025-06-04 14:29:46] 2025-06-04 11:29:27,619 | INFO     | corecount: 4
[2025-06-04 14:29:46] 2025-06-04 11:29:27,619 | INFO     | event service: False
[2025-06-04 14:29:46] 2025-06-04 11:29:27,619 | INFO     | sizes: {0: 2405234, 3: 2405440, 11: 2405468, 4879: 2440698, 4882: 2440812}
[2025-06-04 14:29:46] 2025-06-04 11:29:27,619 | INFO     | --------------------------------------------------
[2025-06-04 14:29:46] 2025-06-04 11:29:27,619 | INFO     | 
[2025-06-04 14:29:46] 2025-06-04 11:29:27,619 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/1
[2025-06-04 14:29:46] 2025-06-04 11:29:27,629 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:29:46] 2025-06-04 11:29:27,629 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:29:46] 2025-06-04 11:29:27,629 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:29:46] 2025-06-04 11:29:27,629 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:29:46] 2025-06-04 11:29:27,629 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:29:46] 2025-06-04 11:29:27,629 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:29:46] 2025-06-04 11:29:27,629 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:29:46] 2025-06-04 11:29:27,629 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:29:46] 2025-06-04 11:29:27,630 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:29:46] 2025-06-04 11:29:27,630 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:29:46] 2025-06-04 11:29:27,630 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:29:46] 2025-06-04 11:29:27,630 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:29:46] 2025-06-04 11:29:27,630 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:29:46] 2025-06-04 11:29:27,630 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:29:46] 2025-06-04 11:29:27,630 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:29:46] 2025-06-04 11:29:27,630 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:29:46] 2025-06-04 11:29:27,630 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:29:46] 2025-06-04 11:29:27,630 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:29:46] 2025-06-04 11:29:27,630 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:29:46] 2025-06-04 11:29:27,630 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:29:46] 2025-06-04 11:29:27,630 | INFO     | job 6667202729 has completed (purged errors)
[2025-06-04 14:29:46] 2025-06-04 11:29:27,630 | INFO     | overall cleanup function is called
[2025-06-04 14:29:46] 2025-06-04 11:29:28,077 | WARNING  | process 1221528 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 14:29:46] 2025-06-04 11:29:28,155 | INFO     | using path: /home/ek/BOINC/slots/1/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:29:46] 2025-06-04 11:29:28,284 | INFO     | number of running child processes to parent process 1221528: 1
[2025-06-04 14:29:46] 2025-06-04 11:29:28,284 | INFO     | maximum number of monitored processes: 6
[2025-06-04 14:29:46] 2025-06-04 11:29:28,284 | INFO     | aborting job monitoring since job object (job id=6667202729) has expired
[2025-06-04 14:29:46] 2025-06-04 11:29:28,637 | INFO     | --- collectZombieJob: --- 10, [1221528]
[2025-06-04 14:29:46] 2025-06-04 11:29:28,637 | INFO     | zombie collector waiting for pid 1221528
[2025-06-04 14:29:46] 2025-06-04 11:29:28,637 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:29:46] 2025-06-04 11:29:28,637 | INFO     | collected zombie processes
[2025-06-04 14:29:46] 2025-06-04 11:29:28,637 | INFO     | will attempt to kill all subprocesses of pid=1221528
[2025-06-04 14:29:46] 2025-06-04 11:29:28,767 | INFO     | process IDs to be killed: [1221528] (in reverse order)
[2025-06-04 14:29:46] 2025-06-04 11:29:28,802 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:29:46] 2025-06-04 11:29:28,802 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:29:46] 2025-06-04 11:29:28,805 | INFO     | did not find any defunct processes belonging to 1221528
[2025-06-04 14:29:46] 2025-06-04 11:29:28,808 | INFO     | did not find any defunct processes belonging to 1221528
[2025-06-04 14:29:46] 2025-06-04 11:29:28,808 | INFO     | ready for new job
[2025-06-04 14:29:46] 2025-06-04 11:29:28,808 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:29:46] 2025-06-04 11:29:28,809 | INFO     | **************************************
[2025-06-04 14:29:46] 2025-06-04 11:29:28,809 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:29:46] 2025-06-04 11:29:28,809 | INFO     | **************************************
[2025-06-04 14:29:46] 2025-06-04 11:29:28,809 | INFO     | 
[2025-06-04 14:29:46] 2025-06-04 11:29:28,809 | INFO     | architecture information:
[2025-06-04 14:29:46] 2025-06-04 11:29:28,810 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:29:46] 2025-06-04 11:29:28,817 | INFO     | cat /etc/os-release:
[2025-06-04 14:29:46] NAME="CentOS Linux"
[2025-06-04 14:29:46] VERSION="7 (Core)"
[2025-06-04 14:29:46] ID="centos"
[2025-06-04 14:29:46] ID_LIKE="rhel fedora"
[2025-06-04 14:29:46] VERSION_ID="7"
[2025-06-04 14:29:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:29:46] ANSI_COLOR="0;31"
[2025-06-04 14:29:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:29:46] HOME_URL="https://www.centos.org/"
[2025-06-04 14:29:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:29:46] 
[2025-06-04 14:29:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:29:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:29:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:29:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:29:46] 
[2025-06-04 14:29:46] 2025-06-04 11:29:28,817 | INFO     | **************************************
[2025-06-04 14:29:46] 2025-06-04 11:29:29,320 | INFO     | executing command: df -mP /home/ek/BOINC/slots/1
[2025-06-04 14:29:46] 2025-06-04 11:29:29,328 | INFO     | sufficient remaining disk space (138067050496 B)
[2025-06-04 14:29:46] 2025-06-04 11:29:29,328 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:29:46] 2025-06-04 11:29:29,328 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:29:46] 2025-06-04 11:29:29,328 | INFO     | update_server=False
[2025-06-04 14:29:46] 2025-06-04 11:29:29,328 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:29:46] 2025-06-04 11:29:29,329 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:29:46] 2025-06-04 11:29:29,329 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 14:29:46] 2025-06-04 11:29:29,329 | INFO     | aborting loop
[2025-06-04 14:29:46] 2025-06-04 11:29:29,329 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:29:46] 2025-06-04 11:29:29,329 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:29:46] 2025-06-04 11:29:29,329 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:29:46] 2025-06-04 11:29:29,457 | INFO     | all job control threads have been joined
[2025-06-04 14:29:46] 2025-06-04 11:29:29,629 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:29:46] 2025-06-04 11:29:30,079 | INFO     | all data control threads have been joined
[2025-06-04 14:29:46] 2025-06-04 11:29:30,229 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:29:46] 2025-06-04 11:29:30,334 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:29:46] 2025-06-04 11:29:30,334 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:29:46] 2025-06-04 11:29:30,462 | INFO     | [job] control thread has finished
[2025-06-04 14:29:46] 2025-06-04 11:29:30,650 | INFO     | all payload control threads have been joined
[2025-06-04 14:29:46] 2025-06-04 11:29:30,775 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:29:46] 2025-06-04 11:29:31,071 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:29:46] 2025-06-04 11:29:31,084 | INFO     | [data] control thread has finished
[2025-06-04 14:29:46] 2025-06-04 11:29:31,205 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:29:46] 2025-06-04 11:29:31,634 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:29:46] 2025-06-04 11:29:31,650 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:29:46] 2025-06-04 11:29:31,655 | INFO     | [payload] control thread has finished
[2025-06-04 14:29:46] 2025-06-04 11:29:31,657 | INFO     | [job] validate thread has finished
[2025-06-04 14:29:46] 2025-06-04 11:29:31,756 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:29:46] 2025-06-04 11:29:31,820 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:29:46] 2025-06-04 11:29:32,131 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:29:46] 2025-06-04 11:29:33,136 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:29:46] 2025-06-04 11:29:34,234 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:29:46] 2025-06-04 11:29:39,727 | INFO     | job.realtimelogging is not enabled
[2025-06-04 14:29:46] 2025-06-04 11:29:40,732 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:29:46] 2025-06-04 11:29:41,691 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140685343020864)>', '<ExcThread(monitor, started 140684849825536)>']
[2025-06-04 14:29:46] 2025-06-04 11:29:42,387 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:29:46] 2025-06-04 11:29:42,388 | INFO     | [monitor] control thread has ended
[2025-06-04 14:29:46] 2025-06-04 11:29:46,716 | INFO     | all workflow threads have been joined
[2025-06-04 14:29:46] 2025-06-04 11:29:46,717 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:29:46] 2025-06-04 11:29:46,717 | INFO     | traces error code: 0
[2025-06-04 14:29:46] 2025-06-04 11:29:46,717 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:29:46] 2025-06-04 11:29:46,778 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:29:46] 2025-06-04 11:29:46,780 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:29:46] 2025-06-04 11:29:46,782 [wrapper] pilotpid: 1214737
[2025-06-04 14:29:46] 2025-06-04 11:29:46,785 [wrapper] Pilot exit status: 0
[2025-06-04 14:29:46] 2025-06-04 11:29:46,792 [wrapper] pandaids: 6667202729
[2025-06-04 14:29:46] 2025-06-04 11:29:46,821 [wrapper] cleanup supervisor_pilot 1280151 1214738
[2025-06-04 14:29:46] 2025-06-04 11:29:46,823 [wrapper] Test setup, not cleaning
[2025-06-04 14:29:46] 2025-06-04 11:29:46,825 [wrapper] apfmon messages muted
[2025-06-04 14:29:46] 2025-06-04 11:29:46,826 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:29:46] 2025-06-04 11:29:46,828 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:29:46]  *** Error codes and diagnostics ***
[2025-06-04 14:29:46]     "exeErrorCode": 0,
[2025-06-04 14:29:46]     "exeErrorDiag": "",
[2025-06-04 14:29:46]     "pilotErrorCode": 0,
[2025-06-04 14:29:46]     "pilotErrorDiag": "",
[2025-06-04 14:29:46]  *** Listing of results directory ***
[2025-06-04 14:29:46] total 419532
[2025-06-04 14:29:46] -rw-r--r-- 1 ek ek    495897 May 27 18:39 pilot3.tar.gz
[2025-06-04 14:29:46] -rw-r--r-- 1 ek ek      5111 May 27 18:46 queuedata.json
[2025-06-04 14:29:46] -rwx------ 1 ek ek     37140 May 27 18:47 runpilot2-wrapper.sh
[2025-06-04 14:29:46] -rw-rw-r-- 1 ek ek       100 Jun  4 13:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:29:46] -rwxr-xr-x 1 ek ek      7986 Jun  4 13:07 run_atlas
[2025-06-04 14:29:46] -rw-rw-r-- 1 ek ek       105 Jun  4 13:07 job.xml
[2025-06-04 14:29:46] -rw-r--r-- 2 ek ek 227368773 Jun  4 13:07 EVNT.44871834._002741.pool.root.1
[2025-06-04 14:29:46] -rw-r--r-- 2 ek ek    508885 Jun  4 13:07 input.tar.gz
[2025-06-04 14:29:46] -rw-r--r-- 2 ek ek     15093 Jun  4 13:07 start_atlas.sh
[2025-06-04 14:29:46] drwxrwx--x 2 ek ek      4096 Jun  4 13:07 shared
[2025-06-04 14:29:46] -rw-rw-r-- 1 ek ek         0 Jun  4 13:07 boinc_setup_complete
[2025-06-04 14:29:46] -rw-rw-r-- 1 ek ek      9842 Jun  4 13:07 init_data.xml
[2025-06-04 14:29:46] -rw-rw-r-- 1 ek ek         0 Jun  4 13:07 boinc_lockfile
[2025-06-04 14:29:46] -rw-rw-r-- 1 ek ek      2559 Jun  4 13:07 pandaJob.out
[2025-06-04 14:29:46] -rw------- 1 ek ek    986766 Jun  4 13:07 agis_schedconf.cvmfs.json
[2025-06-04 14:29:46] -rw------- 1 ek ek   1603667 Jun  4 13:07 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:29:46] drwx------ 4 ek ek      4096 Jun  4 13:07 pilot3
[2025-06-04 14:29:46] -rw------- 1 ek ek        95 Jun  4 14:28 pilot_heartbeat.json
[2025-06-04 14:29:46] -rw------- 1 ek ek 196968770 Jun  4 14:29 HITS.44871837._069706.pool.root.1
[2025-06-04 14:29:46] -rw-rw-r-- 1 ek ek       529 Jun  4 14:29 boinc_task_state.xml
[2025-06-04 14:29:46] -rw------- 1 ek ek      1033 Jun  4 14:29 memory_monitor_summary.json
[2025-06-04 14:29:46] -rw------- 1 ek ek    238203 Jun  4 14:29 log.44871837._069706.job.log.tgz.1
[2025-06-04 14:29:46] -rw------- 1 ek ek      7701 Jun  4 14:29 heartbeat.json
[2025-06-04 14:29:46] -rw-rw-r-- 1 ek ek      8192 Jun  4 14:29 boinc_mmap_file
[2025-06-04 14:29:46] -rw-rw-r-- 1 ek ek        27 Jun  4 14:29 wrapper_checkpoint.txt
[2025-06-04 14:29:46] -rw------- 1 ek ek      4549 Jun  4 14:29 pilotlog.txt
[2025-06-04 14:29:46] -rw------- 1 ek ek    473472 Jun  4 14:29 log.44871837._069706.job.log.1
[2025-06-04 14:29:46] -rw------- 1 ek ek       357 Jun  4 14:29 output.list
[2025-06-04 14:29:46] -rw-rw-r-- 1 ek ek       620 Jun  4 14:29 runtime_log
[2025-06-04 14:29:46] -rw------- 1 ek ek    727040 Jun  4 14:29 result.tar.gz
[2025-06-04 14:29:46] -rw-rw-r-- 1 ek ek      8854 Jun  4 14:29 runtime_log.err
[2025-06-04 14:29:46] -rw------- 1 ek ek       666 Jun  4 14:29 D5EMDmqhBe7n9Rq4apOajLDm4fhM0noT9bVof3QYDmJ2RKDmDjndcn.diag
[2025-06-04 14:29:46] -rw-rw-r-- 1 ek ek     21091 Jun  4 14:29 stderr.txt
[2025-06-04 14:29:46] HITS file was successfully produced:
[2025-06-04 14:29:46] -rw------- 1 ek ek 196968770 Jun  4 14:29 shared/HITS.pool.root.1
[2025-06-04 14:29:46]  *** Contents of shared directory: ***
[2025-06-04 14:29:46] total 415632
[2025-06-04 14:29:46] -rw-r--r-- 2 ek ek 227368773 Jun  4 13:07 ATLAS.root_0
[2025-06-04 14:29:46] -rw-r--r-- 2 ek ek    508885 Jun  4 13:07 input.tar.gz
[2025-06-04 14:29:46] -rw-r--r-- 2 ek ek     15093 Jun  4 13:07 start_atlas.sh
[2025-06-04 14:29:46] -rw------- 1 ek ek 196968770 Jun  4 14:29 HITS.pool.root.1
[2025-06-04 14:29:46] -rw------- 1 ek ek    727040 Jun  4 14:29 result.tar.gz
14:29:47 (1210801): run_atlas exited; CPU time 18511.334682
14:29:47 (1210801): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN