Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:47:46 (22180): wrapper (7.7.26015): starting
12:47:46 (22180): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 12:47:46] Arguments: --nthreads 8
[2025-06-04 12:47:46] Threads: 8
[2025-06-04 12:47:46] Checking for CVMFS
[2025-06-04 12:47:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 12:47:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 12:47:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 12:47:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 12:47:48] 2.11.2.0 20954 33249 88548 146777 3 16 21453660 25165825 3134 130560 0 17116094 99.806 18924428 2081 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 12:47:48] CVMFS is ok
[2025-06-04 12:47:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:47:48] Checking for apptainer binary...
[2025-06-04 12:47:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 12:47:48] Running /usr/bin/apptainer --version
[2025-06-04 12:47:48] apptainer version 1.3.2-1.el7
[2025-06-04 12:47:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:48:07] cg-vwn319.simple-grid.lan
[2025-06-04 12:48:07] apptainer works
[2025-06-04 12:48:07] Set ATHENA_PROC_NUMBER=8
[2025-06-04 12:48:07] Set ATHENA_CORE_NUMBER=8
[2025-06-04 12:48:07] Starting ATLAS job with PandaID=6678150211
[2025-06-04 12:48:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 17:29:31]  *** The last 200 lines of the pilot log: ***
[2025-06-04 17:29:31] 2025-06-04 14:49:25,058 | INFO     | extracted standard info from prmon json
[2025-06-04 17:29:31] 2025-06-04 14:49:25,058 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 17:29:31] 2025-06-04 14:49:25,058 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 17:29:31] 2025-06-04 14:49:25,059 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 17:29:31] 2025-06-04 14:49:25,059 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 17:29:31] 2025-06-04 14:49:25,064 | INFO     | fitting pss+swap vs Time
[2025-06-04 17:29:31] 2025-06-04 14:49:25,065 | INFO     | sum of square deviations: 3531973200.0
[2025-06-04 17:29:31] 2025-06-04 14:49:25,072 | INFO     | sum of deviations: 116518380363.0
[2025-06-04 17:29:31] 2025-06-04 14:49:25,072 | INFO     | mean x: 1749041607.0
[2025-06-04 17:29:31] 2025-06-04 14:49:25,072 | INFO     | mean y: 2401832.4577777777
[2025-06-04 17:29:31] 2025-06-04 14:49:25,072 | INFO     | -- intersect: -57697779820.99835
[2025-06-04 17:29:31] 2025-06-04 14:49:25,073 | INFO     | intersect: -57697779820.99835
[2025-06-04 17:29:31] 2025-06-04 14:49:25,073 | INFO     | chi2: 7.814642609742107
[2025-06-04 17:29:31] 2025-06-04 14:49:25,074 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 17:29:31] 2025-06-04 14:49:25,075 | INFO     | sum of deviations: 128538988696.0
[2025-06-04 17:29:31] 2025-06-04 14:49:25,076 | INFO     | mean x: 1749041454.5
[2025-06-04 17:29:31] 2025-06-04 14:49:25,076 | INFO     | mean y: 2409615.809090909
[2025-06-04 17:29:31] 2025-06-04 14:49:25,076 | INFO     | -- intersect: -68089809547.17509
[2025-06-04 17:29:31] 2025-06-04 14:49:25,076 | INFO     | intersect: -68089809547.17509
[2025-06-04 17:29:31] 2025-06-04 14:49:25,076 | INFO     | chi2: 7.107850802031269
[2025-06-04 17:29:31] 2025-06-04 14:49:25,077 | INFO     | current chi2=7.107850802031269 (change=9.044454660405291 %)
[2025-06-04 17:29:31] 2025-06-04 14:49:25,077 | INFO     | right removable region: 219
[2025-06-04 17:29:31] 2025-06-04 14:49:25,077 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 17:29:31] 2025-06-04 14:49:25,079 | INFO     | sum of deviations: 39618408038.99999
[2025-06-04 17:29:31] 2025-06-04 14:49:25,079 | INFO     | mean x: 1749041759.5
[2025-06-04 17:29:31] 2025-06-04 14:49:25,079 | INFO     | mean y: 2452719.8181818184
[2025-06-04 17:29:31] 2025-06-04 14:49:25,079 | INFO     | -- intersect: -20984998798.798317
[2025-06-04 17:29:31] 2025-06-04 14:49:25,080 | INFO     | intersect: -20984998798.798317
[2025-06-04 17:29:31] 2025-06-04 14:49:25,080 | INFO     | chi2: 2.890386054136896
[2025-06-04 17:29:31] 2025-06-04 14:49:25,080 | INFO     | current chi2=2.890386054136896 (change=63.01320228600598 %)
[2025-06-04 17:29:31] 2025-06-04 14:49:25,081 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 17:29:31] 2025-06-04 14:49:25,082 | INFO     | sum of deviations: -9142413857.0
[2025-06-04 17:29:31] 2025-06-04 14:49:25,083 | INFO     | mean x: 1749041912.0
[2025-06-04 17:29:31] 2025-06-04 14:49:25,083 | INFO     | mean y: 2486370.623255814
[2025-06-04 17:29:31] 2025-06-04 14:49:25,083 | INFO     | -- intersect: 5191402906.560798
[2025-06-04 17:29:31] 2025-06-04 14:49:25,083 | INFO     | intersect: 5191402906.560798
[2025-06-04 17:29:31] 2025-06-04 14:49:25,083 | INFO     | chi2: 0.858046078420425
[2025-06-04 17:29:31] 2025-06-04 14:49:25,083 | INFO     | current chi2=0.858046078420425 (change=70.31378984159097 %)
[2025-06-04 17:29:31] 2025-06-04 14:49:25,084 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 17:29:31] 2025-06-04 14:49:25,092 | INFO     | sum of deviations: -16696417878.5
[2025-06-04 17:29:31] 2025-06-04 14:49:25,092 | INFO     | mean x: 1749042064.5
[2025-06-04 17:29:31] 2025-06-04 14:49:25,092 | INFO     | mean y: 2491830.557142857
[2025-06-04 17:29:31] 2025-06-04 14:49:25,092 | INFO     | -- intersect: 10171933275.302763
[2025-06-04 17:29:31] 2025-06-04 14:49:25,093 | INFO     | intersect: 10171933275.302763
[2025-06-04 17:29:31] 2025-06-04 14:49:25,093 | INFO     | chi2: 0.7993278373022469
[2025-06-04 17:29:31] 2025-06-04 14:49:25,093 | INFO     | current chi2=0.7993278373022469 (change=6.843250332927623 %)
[2025-06-04 17:29:31] 2025-06-04 14:49:25,093 | INFO     | left removable region: 30
[2025-06-04 17:29:31] 2025-06-04 14:49:25,094 | INFO     | sum of square deviations: 2093397390.0
[2025-06-04 17:29:31] 2025-06-04 14:49:25,095 | INFO     | sum of deviations: -801321010.0000006
[2025-06-04 17:29:31] 2025-06-04 14:49:25,095 | INFO     | mean x: 1749042339.0
[2025-06-04 17:29:31] 2025-06-04 14:49:25,095 | INFO     | mean y: 2500826.1534391535
[2025-06-04 17:29:31] 2025-06-04 14:49:25,096 | INFO     | -- intersect: 672007906.0396158
[2025-06-04 17:29:31] 2025-06-04 14:49:25,096 | INFO     | intersect: 672007906.0396158
[2025-06-04 17:29:31] 2025-06-04 14:49:25,096 | INFO     | chi2: 0.006207933069974709
[2025-06-04 17:29:31] 2025-06-04 14:49:25,096 | INFO     | -- intersect: 672007906.0396158
[2025-06-04 17:29:31] 2025-06-04 14:49:25,096 | INFO     | current memory leak: -0.38 B/s (using 189 data points, chi2=0.01)
[2025-06-04 17:29:31] 2025-06-04 14:49:25,097 | INFO     | ..............................
[2025-06-04 17:29:31] 2025-06-04 14:49:25,097 | INFO     | . Timing measurements:
[2025-06-04 17:29:31] 2025-06-04 14:49:25,098 | INFO     | . get job = 0 s
[2025-06-04 17:29:31] 2025-06-04 14:49:25,098 | INFO     | . initial setup = 3 s
[2025-06-04 17:29:31] 2025-06-04 14:49:25,098 | INFO     | . payload setup = 159 s
[2025-06-04 17:29:31] 2025-06-04 14:49:25,098 | INFO     | . stage-in = 0 s
[2025-06-04 17:29:31] 2025-06-04 14:49:25,098 | INFO     | . payload execution = 13858 s
[2025-06-04 17:29:31] 2025-06-04 14:49:25,098 | INFO     | . stage-out = 2 s
[2025-06-04 17:29:31] 2025-06-04 14:49:25,098 | INFO     | . log creation = 0 s
[2025-06-04 17:29:31] 2025-06-04 14:49:25,098 | INFO     | ..............................
[2025-06-04 17:29:31] 2025-06-04 14:49:25,276 | INFO     | 
[2025-06-04 17:29:31] 2025-06-04 14:49:25,276 | INFO     | job summary report
[2025-06-04 17:29:31] 2025-06-04 14:49:25,276 | INFO     | --------------------------------------------------
[2025-06-04 17:29:31] 2025-06-04 14:49:25,276 | INFO     | PanDA job id: 6678150211
[2025-06-04 17:29:31] 2025-06-04 14:49:25,277 | INFO     | task id: 45006595
[2025-06-04 17:29:31] 2025-06-04 14:49:25,277 | INFO     | errors: (none)
[2025-06-04 17:29:31] 2025-06-04 14:49:25,277 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 17:29:31] 2025-06-04 14:49:25,277 | INFO     | pilot state: finished 
[2025-06-04 17:29:31] 2025-06-04 14:49:25,277 | INFO     | transexitcode: 0
[2025-06-04 17:29:31] 2025-06-04 14:49:25,277 | INFO     | exeerrorcode: 0
[2025-06-04 17:29:31] 2025-06-04 14:49:25,277 | INFO     | exeerrordiag: 
[2025-06-04 17:29:31] 2025-06-04 14:49:25,277 | INFO     | exitcode: 0
[2025-06-04 17:29:31] 2025-06-04 14:49:25,277 | INFO     | exitmsg: OK
[2025-06-04 17:29:31] 2025-06-04 14:49:25,277 | INFO     | cpuconsumptiontime: 51092 s
[2025-06-04 17:29:31] 2025-06-04 14:49:25,278 | INFO     | nevents: 400
[2025-06-04 17:29:31] 2025-06-04 14:49:25,278 | INFO     | neventsw: 0
[2025-06-04 17:29:31] 2025-06-04 14:49:25,278 | INFO     | pid: 4901
[2025-06-04 17:29:31] 2025-06-04 14:49:25,278 | INFO     | pgrp: 4901
[2025-06-04 17:29:31] 2025-06-04 14:49:25,278 | INFO     | corecount: 8
[2025-06-04 17:29:31] 2025-06-04 14:49:25,278 | INFO     | event service: False
[2025-06-04 17:29:31] 2025-06-04 14:49:25,278 | INFO     | sizes: {0: 2404354, 1: 2405039, 2: 2405238, 13: 2405238, 23: 2405294, 34: 2405322, 45: 2405478, 56: 2405506, 66: 2405534, 77: 2405562, 88: 2406132, 99: 2406132, 14
[2025-06-04 17:29:31] 2025-06-04 14:49:25,278 | INFO     | --------------------------------------------------
[2025-06-04 17:29:31] 2025-06-04 14:49:25,278 | INFO     | 
[2025-06-04 17:29:31] 2025-06-04 14:49:25,279 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-06-04 17:29:31] 2025-06-04 14:49:25,677 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 17:29:31] 2025-06-04 14:49:25,678 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 17:29:31] 2025-06-04 14:49:25,678 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 17:29:31] 2025-06-04 14:49:25,678 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 17:29:31] 2025-06-04 14:49:25,678 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 17:29:31] 2025-06-04 14:49:25,678 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 17:29:31] 2025-06-04 14:49:25,678 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 17:29:31] 2025-06-04 14:49:25,679 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 17:29:31] 2025-06-04 14:49:25,679 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 17:29:31] 2025-06-04 14:49:25,679 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 17:29:31] 2025-06-04 14:49:25,679 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 17:29:31] 2025-06-04 14:49:25,679 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 17:29:31] 2025-06-04 14:49:25,679 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 17:29:31] 2025-06-04 14:49:25,679 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 17:29:31] 2025-06-04 14:49:25,679 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 17:29:31] 2025-06-04 14:49:25,679 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 17:29:31] 2025-06-04 14:49:25,680 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 17:29:31] 2025-06-04 14:49:25,680 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 17:29:31] 2025-06-04 14:49:25,680 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 17:29:31] 2025-06-04 14:49:25,680 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 17:29:31] 2025-06-04 14:49:25,680 | INFO     | job 6678150211 has completed (purged errors)
[2025-06-04 17:29:31] 2025-06-04 14:49:25,680 | INFO     | overall cleanup function is called
[2025-06-04 17:29:31] 2025-06-04 14:49:26,689 | INFO     | --- collectZombieJob: --- 10, [4901]
[2025-06-04 17:29:31] 2025-06-04 14:49:26,689 | INFO     | zombie collector waiting for pid 4901
[2025-06-04 17:29:31] 2025-06-04 14:49:26,689 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 17:29:31] 2025-06-04 14:49:26,690 | INFO     | collected zombie processes
[2025-06-04 17:29:31] 2025-06-04 14:49:26,690 | INFO     | will attempt to kill all subprocesses of pid=4901
[2025-06-04 17:29:31] 2025-06-04 14:49:26,809 | INFO     | process IDs to be killed: [4901] (in reverse order)
[2025-06-04 17:29:31] 2025-06-04 14:49:27,789 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 17:29:31] 2025-06-04 14:49:27,789 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 17:29:31] 2025-06-04 14:49:27,793 | INFO     | did not find any defunct processes belonging to 4901
[2025-06-04 17:29:31] 2025-06-04 14:49:27,796 | INFO     | did not find any defunct processes belonging to 4901
[2025-06-04 17:29:31] 2025-06-04 14:49:27,797 | INFO     | ready for new job
[2025-06-04 17:29:31] 2025-06-04 14:49:27,797 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 17:29:31] 2025-06-04 14:49:27,799 | INFO     | **************************************
[2025-06-04 17:29:31] 2025-06-04 14:49:27,799 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 17:29:31] 2025-06-04 14:49:27,799 | INFO     | **************************************
[2025-06-04 17:29:31] 2025-06-04 14:49:27,799 | INFO     | 
[2025-06-04 17:29:31] 2025-06-04 14:49:27,800 | INFO     | pilot is running in a VM
[2025-06-04 17:29:31] 2025-06-04 14:49:27,800 | INFO     | architecture information:
[2025-06-04 17:29:31] 2025-06-04 14:49:27,801 | INFO     | executing command: cat /etc/os-release
[2025-06-04 17:29:31] 2025-06-04 14:49:27,951 | INFO     | cat /etc/os-release:
[2025-06-04 17:29:31] NAME="CentOS Linux"
[2025-06-04 17:29:31] VERSION="7 (Core)"
[2025-06-04 17:29:31] ID="centos"
[2025-06-04 17:29:31] ID_LIKE="rhel fedora"
[2025-06-04 17:29:31] VERSION_ID="7"
[2025-06-04 17:29:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 17:29:31] ANSI_COLOR="0;31"
[2025-06-04 17:29:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 17:29:31] HOME_URL="https://www.centos.org/"
[2025-06-04 17:29:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 17:29:31] 
[2025-06-04 17:29:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 17:29:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 17:29:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 17:29:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 17:29:31] 
[2025-06-04 17:29:31] 2025-06-04 14:49:27,951 | INFO     | **************************************
[2025-06-04 17:29:31] 2025-06-04 14:49:28,455 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-06-04 17:29:31] 2025-06-04 14:49:28,578 | INFO     | sufficient remaining disk space (496819503104 B)
[2025-06-04 17:29:31] 2025-06-04 14:49:28,578 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 17:29:31] 2025-06-04 14:49:28,578 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 17:29:31] 2025-06-04 14:49:28,578 | INFO     | update_server=False
[2025-06-04 17:29:31] 2025-06-04 14:49:28,579 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 17:29:31] 2025-06-04 14:49:28,579 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 17:29:31] 2025-06-04 14:49:28,579 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 17:29:31] 2025-06-04 14:49:28,579 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 17:29:31] 2025-06-04 14:49:28,579 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 17:29:31] 2025-06-04 14:49:28,580 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 17:29:31] 2025-06-04 14:49:28,585 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 17:29:31] 2025-06-04 14:49:28,811 | INFO     | all data control threads have been joined
[2025-06-04 17:29:31] 2025-06-04 14:49:29,528 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:29:31] 2025-06-04 14:49:29,528 | INFO     | aborting loop
[2025-06-04 17:29:31] 2025-06-04 14:49:29,585 | INFO     | [job] retrieve thread has finished
[2025-06-04 17:29:31] 2025-06-04 14:49:29,586 | INFO     | [job] validate thread has finished
[2025-06-04 17:29:31] 2025-06-04 14:49:29,601 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 17:29:31] 2025-06-04 14:49:29,632 | INFO     | all payload control threads have been joined
[2025-06-04 17:29:31] 2025-06-04 14:49:29,817 | INFO     | [data] control thread has finished
[2025-06-04 17:29:31] 2025-06-04 14:49:30,125 | INFO     | all job control threads have been joined
[2025-06-04 17:29:31] 2025-06-04 14:49:30,132 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 17:29:31] 2025-06-04 14:49:30,234 | INFO     | [data] copytool_in thread has finished
[2025-06-04 17:29:31] 2025-06-04 14:49:30,289 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:29:31] 2025-06-04 14:49:30,534 | INFO     | [job] job monitor thread has finished
[2025-06-04 17:29:31] 2025-06-04 14:49:30,552 | INFO     | [payload] validate_post thread has finished
[2025-06-04 17:29:31] 2025-06-04 14:49:30,590 | INFO     | [data] copytool_out thread has finished
[2025-06-04 17:29:31] 2025-06-04 14:49:30,638 | INFO     | [payload] control thread has finished
[2025-06-04 17:29:31] 2025-06-04 14:49:30,653 | INFO     | [payload] failed_post thread has finished
[2025-06-04 17:29:31] 2025-06-04 14:49:30,712 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 17:29:31] 2025-06-04 14:49:30,834 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 17:29:31] 2025-06-04 14:49:31,131 | INFO     | [job] control thread has finished
[2025-06-04 17:29:31] 2025-06-04 14:49:31,295 | INFO     | [job] queue monitor thread has finished
[2025-06-04 17:29:31] 2025-06-04 14:49:32,594 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 17:29:31] 2025-06-04 14:49:34,052 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139863642666816)>', '<ExcThread(monitor, started 139863353435904)>']
[2025-06-04 17:29:31] 2025-06-04 14:49:34,615 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 17:29:31] 2025-06-04 14:49:34,615 | INFO     | [monitor] control thread has ended
[2025-06-04 17:29:31] 2025-06-04 14:49:39,078 | INFO     | all workflow threads have been joined
[2025-06-04 17:29:31] 2025-06-04 14:49:39,078 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 17:29:31] 2025-06-04 14:49:39,079 | INFO     | traces error code: 0
[2025-06-04 17:29:31] 2025-06-04 14:49:39,079 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 17:29:31] 2025-06-04 14:49:39,538 [wrapper] ==== pilot stdout END ====
[2025-06-04 17:29:31] 2025-06-04 14:49:39,625 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 17:29:31] 2025-06-04 14:49:39,660 [wrapper] pilotpid: 28692
[2025-06-04 17:29:31] 2025-06-04 14:49:39,727 [wrapper] Pilot exit status: 0
[2025-06-04 17:29:31] 2025-06-04 14:49:39,906 [wrapper] pandaids: 6678150211
[2025-06-04 17:29:31] 2025-06-04 14:49:40,901 [wrapper] cleanup supervisor_pilot 12259 28693
[2025-06-04 17:29:31] 2025-06-04 14:49:40,931 [wrapper] Test setup, not cleaning
[2025-06-04 17:29:31] 2025-06-04 14:49:40,968 [wrapper] apfmon messages muted
[2025-06-04 17:29:31] 2025-06-04 14:49:41,046 [wrapper] ==== wrapper stdout END ====
[2025-06-04 17:29:31] 2025-06-04 14:49:41,088 [wrapper] ==== wrapper stderr END ====
[2025-06-04 17:29:31]  *** Error codes and diagnostics ***
[2025-06-04 17:29:31]     "exeErrorCode": 0,
[2025-06-04 17:29:31]     "exeErrorDiag": "",
[2025-06-04 17:29:31]     "pilotErrorCode": 0,
[2025-06-04 17:29:31]     "pilotErrorDiag": "",
[2025-06-04 17:29:31]  *** Listing of results directory ***
[2025-06-04 17:29:31] total 393960
[2025-06-04 17:29:31] -rw-r--r--. 1 boinc boinc    495897 Jun  3 23:57 pilot3.tar.gz
[2025-06-04 17:29:31] -rw-r--r--. 1 boinc boinc      5111 Jun  4 00:00 queuedata.json
[2025-06-04 17:29:31] -rwx------. 1 boinc boinc     37140 Jun  4 00:00 runpilot2-wrapper.sh
[2025-06-04 17:29:31] -rw-r--r--. 1 boinc boinc       100 Jun  4 12:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 17:29:31] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 12:47 run_atlas
[2025-06-04 17:29:31] -rw-r--r--. 1 boinc boinc       105 Jun  4 12:47 job.xml
[2025-06-04 17:29:31] -rw-r--r--. 1 boinc boinc      6391 Jun  4 12:47 init_data.xml
[2025-06-04 17:29:31] -rw-r--r--. 2 boinc boinc 215578707 Jun  4 12:47 EVNT.45006593._001873.pool.root.1
[2025-06-04 17:29:31] -rw-r--r--. 2 boinc boinc     15093 Jun  4 12:47 start_atlas.sh
[2025-06-04 17:29:31] drwxrwx--x. 2 boinc boinc        68 Jun  4 12:47 shared
[2025-06-04 17:29:31] -rw-r--r--. 2 boinc boinc    508877 Jun  4 12:47 input.tar.gz
[2025-06-04 17:29:31] -rw-r--r--. 1 boinc boinc         0 Jun  4 12:47 boinc_lockfile
[2025-06-04 17:29:31] -rw-r--r--. 1 boinc boinc      2524 Jun  4 12:48 pandaJob.out
[2025-06-04 17:29:31] -rw-------. 1 boinc boinc    986812 Jun  4 12:51 agis_schedconf.cvmfs.json
[2025-06-04 17:29:31] drwx------. 4 boinc boinc      4096 Jun  4 12:51 pilot3
[2025-06-04 17:29:31] -rw-------. 1 boinc boinc 180840332 Jun  4 16:46 HITS.45006595._046710.pool.root.1
[2025-06-04 17:29:31] -rw-r--r--. 1 boinc boinc       531 Jun  4 16:46 boinc_task_state.xml
[2025-06-04 17:29:31] -rw-------. 1 boinc boinc      1013 Jun  4 16:47 memory_monitor_summary.json
[2025-06-04 17:29:31] -rw-------. 1 boinc boinc   1598969 Jun  4 16:48 agis_ddmendpoints.agis.ALL.json
[2025-06-04 17:29:31] -rw-------. 1 boinc boinc    371305 Jun  4 16:48 log.45006595._046710.job.log.tgz.1
[2025-06-04 17:29:31] -rw-------. 1 boinc boinc        95 Jun  4 16:48 pilot_heartbeat.json
[2025-06-04 17:29:31] -rw-------. 1 boinc boinc      7685 Jun  4 16:49 heartbeat.json
[2025-06-04 17:29:31] -rw-------. 1 boinc boinc      4539 Jun  4 16:49 pilotlog.txt
[2025-06-04 17:29:31] -rw-------. 1 boinc boinc   1214668 Jun  4 16:49 log.45006595._046710.job.log.1
[2025-06-04 17:29:31] -rw-------. 1 boinc boinc       357 Jun  4 16:49 output.list
[2025-06-04 17:29:31] -rw-r--r--. 1 boinc boinc       620 Jun  4 16:49 runtime_log
[2025-06-04 17:29:31] -rw-------. 1 boinc boinc   1607680 Jun  4 16:49 result.tar.gz
[2025-06-04 17:29:31] -rw-------. 1 boinc boinc       657 Jun  4 16:49 x5eMDmVrog7n9Rq4apOajLDm4fhM0noT9bVof3QYDmj6ZKDm1DdZam.diag
[2025-06-04 17:29:31] -rw-r--r--. 1 boinc boinc      8659 Jun  4 16:49 runtime_log.err
[2025-06-04 17:29:31] -rw-r--r--. 1 boinc boinc      8192 Jun  4 17:29 boinc_mmap_file
[2025-06-04 17:29:31] -rw-r--r--. 1 boinc boinc        28 Jun  4 17:29 wrapper_checkpoint.txt
[2025-06-04 17:29:31] -rw-r--r--. 1 boinc boinc     20491 Jun  4 17:29 stderr.txt
[2025-06-04 17:29:31] HITS file was successfully produced:
[2025-06-04 17:29:31] -rw-------. 1 boinc boinc 180840332 Jun  4 16:46 shared/HITS.pool.root.1
[2025-06-04 17:29:31]  *** Contents of shared directory: ***
[2025-06-04 17:29:31] total 389220
[2025-06-04 17:29:31] -rw-r--r--. 2 boinc boinc 215578707 Jun  4 12:47 ATLAS.root_0
[2025-06-04 17:29:31] -rw-r--r--. 2 boinc boinc     15093 Jun  4 12:47 start_atlas.sh
[2025-06-04 17:29:31] -rw-r--r--. 2 boinc boinc    508877 Jun  4 12:47 input.tar.gz
[2025-06-04 17:29:31] -rw-------. 1 boinc boinc 180840332 Jun  4 16:46 HITS.pool.root.1
[2025-06-04 17:29:31] -rw-------. 1 boinc boinc   1607680 Jun  4 16:49 result.tar.gz
17:29:33 (22180): run_atlas exited; CPU time 51286.662052
17:29:33 (22180): called boinc_finish(0)

</stderr_txt>
]]>

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