Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
15:11:51 (784753): wrapper (7.7.26015): starting
15:11:51 (784753): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 15:11:51] Arguments: --nthreads 3
[2025-06-04 15:11:51] Threads: 3
[2025-06-04 15:11:51] Checking for CVMFS
[2025-06-04 15:11:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 15:11:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 15:11:51] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 15:11:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 15:11:52] 2.9.2.0 8891 2582 68868 146780 1 56 32614900 36864000 0 130560 0 2078036 99.992 605227 49085 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 15:11:52] CVMFS is ok
[2025-06-04 15:11:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 15:11:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 15:11:52] Further information can be found at the LHC@home message board.
[2025-06-04 15:11:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 15:11:52] Checking for apptainer binary...
[2025-06-04 15:11:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 15:11:52] Running /usr/bin/apptainer --version
[2025-06-04 15:11:52] apptainer version 1.3.6-6.1
[2025-06-04 15:11:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 15:11:52] atlasA223a
[2025-06-04 15:11:52] apptainer works
[2025-06-04 15:11:52] Set ATHENA_PROC_NUMBER=3
[2025-06-04 15:11:52] Set ATHENA_CORE_NUMBER=3
[2025-06-04 15:11:52] Starting ATLAS job with PandaID=6677921305
[2025-06-04 15:11:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 16:31:13]  *** The last 200 lines of the pilot log: ***
[2025-06-04 16:31:13]  status=None
[2025-06-04 16:31:13]  status_code=0
[2025-06-04 16:31:13]  storage_token=
[2025-06-04 16:31:13]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6677921305/log.45006595._042516.job.log.tgz.1
[2025-06-04 16:31:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/9b/log.45006595._042516.job.log.tgz.1
[2025-06-04 16:31:13]  workdir=None
[2025-06-04 16:31:13] ]
[2025-06-04 16:31:13] 2025-06-04 14:30:51,233 | INFO     | transferring file log.45006595._042516.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6677921305/log.45006595._042516.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 16:31:13] 2025-06-04 14:30:51,233 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6677921305/log.45006595._042516.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0425
[2025-06-04 16:31:13] 2025-06-04 14:30:51,245 | INFO     | adding to output.list: log.45006595._042516.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ce/9b/log.45006595._042516.job.log.tg
[2025-06-04 16:31:13] 2025-06-04 14:30:51,246 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 16:31:13] 2025-06-04 14:30:51,246 | INFO     | summary of transferred files:
[2025-06-04 16:31:13] 2025-06-04 14:30:51,246 | INFO     |  -- lfn=log.45006595._042516.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 16:31:13] 2025-06-04 14:30:51,246 | INFO     | stage-out finished correctly
[2025-06-04 16:31:13] 2025-06-04 14:30:51,277 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 16:31:13] 2025-06-04 14:30:53,526 | INFO     | job 6677921305 has state=finished
[2025-06-04 16:31:13] 2025-06-04 14:30:53,526 | INFO     | preparing for final server update for job 6677921305 in state='finished'
[2025-06-04 16:31:13] 2025-06-04 14:30:53,528 | INFO     | this job has now completed (state=finished)
[2025-06-04 16:31:13] 2025-06-04 14:30:53,528 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 16:31:13] 2025-06-04 14:30:53,528 | INFO     | log transfer has been attempted: DONE
[2025-06-04 16:31:13] 2025-06-04 14:30:53,529 | INFO     | job 6677921305 has finished - writing final server update
[2025-06-04 16:31:13] 2025-06-04 14:30:53,529 | INFO     | total number of processed events: 400 (read)
[2025-06-04 16:31:13] 2025-06-04 14:30:53,532 | INFO     | executing command: lscpu
[2025-06-04 16:31:13] 2025-06-04 14:30:53,545 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 16:31:13] 2025-06-04 14:30:54,813 | WARNING  | process 794895 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 16:31:13] 2025-06-04 14:30:54,813 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677921305/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 16:31:13] 2025-06-04 14:30:54,814 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677921305/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 16:31:13] 2025-06-04 14:30:54,814 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2453457 B
[2025-06-04 16:31:13] 2025-06-04 14:30:54,814 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15787 B
[2025-06-04 16:31:13] 2025-06-04 14:30:54,814 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 16:31:13] 2025-06-04 14:30:56,526 | INFO     | PID=788398 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 16:31:13] 2025-06-04 14:31:01,067 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 16:31:13] 2025-06-04 14:31:01,068 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677921305/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 16:31:13] 2025-06-04 14:31:01,070 | INFO     | extracted standard info from prmon json
[2025-06-04 16:31:13] 2025-06-04 14:31:01,070 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 16:31:13] 2025-06-04 14:31:01,070 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 16:31:13] 2025-06-04 14:31:01,071 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 16:31:13] 2025-06-04 14:31:01,071 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 16:31:13] 2025-06-04 14:31:01,072 | INFO     | fitting pss+swap vs Time
[2025-06-04 16:31:13] 2025-06-04 14:31:01,072 | INFO     | sum of square deviations: 106336877.5
[2025-06-04 16:31:13] 2025-06-04 14:31:01,072 | INFO     | sum of deviations: -5713072303.0
[2025-06-04 16:31:13] 2025-06-04 14:31:01,072 | INFO     | mean x: 1749045160.5
[2025-06-04 16:31:13] 2025-06-04 14:31:01,072 | INFO     | mean y: 2407864.4857142856
[2025-06-04 16:31:13] 2025-06-04 14:31:01,072 | INFO     | -- intersect: 93971891434.74326
[2025-06-04 16:31:13] 2025-06-04 14:31:01,072 | INFO     | intersect: 93971891434.74326
[2025-06-04 16:31:13] 2025-06-04 14:31:01,073 | INFO     | chi2: 0.10791157149549747
[2025-06-04 16:31:13] 2025-06-04 14:31:01,073 | INFO     | -- intersect: 93971891434.74326
[2025-06-04 16:31:13] 2025-06-04 14:31:01,073 | INFO     | current memory leak: -53.73 B/s (using 70 data points, chi2=0.11)
[2025-06-04 16:31:13] 2025-06-04 14:31:01,073 | INFO     | ..............................
[2025-06-04 16:31:13] 2025-06-04 14:31:01,073 | INFO     | . Timing measurements:
[2025-06-04 16:31:13] 2025-06-04 14:31:01,073 | INFO     | . get job = 0 s
[2025-06-04 16:31:13] 2025-06-04 14:31:01,073 | INFO     | . initial setup = 1 s
[2025-06-04 16:31:13] 2025-06-04 14:31:01,073 | INFO     | . payload setup = 5 s
[2025-06-04 16:31:13] 2025-06-04 14:31:01,073 | INFO     | . stage-in = 0 s
[2025-06-04 16:31:13] 2025-06-04 14:31:01,073 | INFO     | . payload execution = 4699 s
[2025-06-04 16:31:13] 2025-06-04 14:31:01,073 | INFO     | . stage-out = 0 s
[2025-06-04 16:31:13] 2025-06-04 14:31:01,074 | INFO     | . log creation = 0 s
[2025-06-04 16:31:13] 2025-06-04 14:31:01,074 | INFO     | ..............................
[2025-06-04 16:31:13] 2025-06-04 14:31:01,102 | INFO     | sufficient remaining disk space (322818801664 B)
[2025-06-04 16:31:13] 2025-06-04 14:31:01,106 | INFO     | 
[2025-06-04 16:31:13] 2025-06-04 14:31:01,106 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 16:31:13] 2025-06-04 14:31:01,106 | INFO     | job summary report
[2025-06-04 16:31:13] 2025-06-04 14:31:01,106 | INFO     | --------------------------------------------------
[2025-06-04 16:31:13] 2025-06-04 14:31:01,107 | INFO     | PanDA job id: 6677921305
[2025-06-04 16:31:13] 2025-06-04 14:31:01,107 | INFO     | task id: 45006595
[2025-06-04 16:31:13] 2025-06-04 14:31:01,107 | INFO     | errors: (none)
[2025-06-04 16:31:13] 2025-06-04 14:31:01,107 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 16:31:13] 2025-06-04 14:31:01,107 | INFO     | pilot state: finished 
[2025-06-04 16:31:13] 2025-06-04 14:31:01,107 | INFO     | transexitcode: 0
[2025-06-04 16:31:13] 2025-06-04 14:31:01,107 | INFO     | exeerrorcode: 0
[2025-06-04 16:31:13] 2025-06-04 14:31:01,107 | INFO     | exeerrordiag: 
[2025-06-04 16:31:13] 2025-06-04 14:31:01,107 | INFO     | exitcode: 0
[2025-06-04 16:31:13] 2025-06-04 14:31:01,107 | INFO     | exitmsg: OK
[2025-06-04 16:31:13] 2025-06-04 14:31:01,107 | INFO     | cpuconsumptiontime: 13426 s
[2025-06-04 16:31:13] 2025-06-04 14:31:01,107 | INFO     | nevents: 400
[2025-06-04 16:31:13] 2025-06-04 14:31:01,107 | INFO     | neventsw: 0
[2025-06-04 16:31:13] 2025-06-04 14:31:01,107 | INFO     | pid: 794895
[2025-06-04 16:31:13] 2025-06-04 14:31:01,107 | INFO     | pgrp: 794895
[2025-06-04 16:31:13] 2025-06-04 14:31:01,107 | INFO     | corecount: 3
[2025-06-04 16:31:13] 2025-06-04 14:31:01,107 | INFO     | event service: False
[2025-06-04 16:31:13] 2025-06-04 14:31:01,108 | INFO     | sizes: {0: 2397345, 7: 2397551, 11: 2397579, 4709: 2423723, 4710: 2432726, 4720: 2432840}
[2025-06-04 16:31:13] 2025-06-04 14:31:01,108 | INFO     | --------------------------------------------------
[2025-06-04 16:31:13] 2025-06-04 14:31:01,108 | INFO     | 
[2025-06-04 16:31:13] 2025-06-04 14:31:01,108 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 16:31:13] 2025-06-04 14:31:01,110 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6677921305: 2749966 B (within 2537553920 B limit)
[2025-06-04 16:31:13] 2025-06-04 14:31:01,110 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6677921305/HITS.45006595._042516.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 16:31:13] 2025-06-04 14:31:01,111 | INFO     | total size of present files: 0 B (workdir size: 2749966 B)
[2025-06-04 16:31:13] 2025-06-04 14:31:01,111 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6677921305/HITS.45006595._042516.pool.root.1 since it does not exist
[2025-06-04 16:31:13] 2025-06-04 14:31:01,120 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 16:31:13] 2025-06-04 14:31:01,120 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 16:31:13] 2025-06-04 14:31:01,120 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 16:31:13] 2025-06-04 14:31:01,120 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 16:31:13] 2025-06-04 14:31:01,120 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 16:31:13] 2025-06-04 14:31:01,120 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 16:31:13] 2025-06-04 14:31:01,120 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 16:31:13] 2025-06-04 14:31:01,120 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 16:31:13] 2025-06-04 14:31:01,120 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 16:31:13] 2025-06-04 14:31:01,120 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 16:31:13] 2025-06-04 14:31:01,120 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 16:31:13] 2025-06-04 14:31:01,121 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 16:31:13] 2025-06-04 14:31:01,121 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 16:31:13] 2025-06-04 14:31:01,121 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 16:31:13] 2025-06-04 14:31:01,121 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 16:31:13] 2025-06-04 14:31:01,121 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 16:31:13] 2025-06-04 14:31:01,121 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 16:31:13] 2025-06-04 14:31:01,121 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 16:31:13] 2025-06-04 14:31:01,121 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 16:31:13] 2025-06-04 14:31:01,121 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 16:31:13] 2025-06-04 14:31:01,121 | INFO     | job 6677921305 has completed (purged errors)
[2025-06-04 16:31:13] 2025-06-04 14:31:01,121 | INFO     | overall cleanup function is called
[2025-06-04 16:31:13] 2025-06-04 14:31:01,156 | INFO     | number of running child processes to parent process 794895: 1
[2025-06-04 16:31:13] 2025-06-04 14:31:01,156 | INFO     | maximum number of monitored processes: 6
[2025-06-04 16:31:13] 2025-06-04 14:31:01,157 | INFO     | aborting job monitoring since job object (job id=6677921305) has expired
[2025-06-04 16:31:13] 2025-06-04 14:31:02,129 | INFO     | --- collectZombieJob: --- 10, [794895]
[2025-06-04 16:31:13] 2025-06-04 14:31:02,129 | INFO     | zombie collector waiting for pid 794895
[2025-06-04 16:31:13] 2025-06-04 14:31:02,129 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 16:31:13] 2025-06-04 14:31:02,129 | INFO     | collected zombie processes
[2025-06-04 16:31:13] 2025-06-04 14:31:02,130 | INFO     | will attempt to kill all subprocesses of pid=794895
[2025-06-04 16:31:13] 2025-06-04 14:31:02,169 | INFO     | process IDs to be killed: [794895] (in reverse order)
[2025-06-04 16:31:13] 2025-06-04 14:31:02,196 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 16:31:13] 2025-06-04 14:31:02,196 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 16:31:13] 2025-06-04 14:31:02,197 | INFO     | did not find any defunct processes belonging to 794895
[2025-06-04 16:31:13] 2025-06-04 14:31:02,198 | INFO     | did not find any defunct processes belonging to 794895
[2025-06-04 16:31:13] 2025-06-04 14:31:02,198 | INFO     | ready for new job
[2025-06-04 16:31:13] 2025-06-04 14:31:02,198 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 16:31:13] 2025-06-04 14:31:02,199 | INFO     | **************************************
[2025-06-04 16:31:13] 2025-06-04 14:31:02,199 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 16:31:13] 2025-06-04 14:31:02,199 | INFO     | **************************************
[2025-06-04 16:31:13] 2025-06-04 14:31:02,199 | INFO     | 
[2025-06-04 16:31:13] 2025-06-04 14:31:02,200 | INFO     | architecture information:
[2025-06-04 16:31:13] 2025-06-04 14:31:02,200 | INFO     | executing command: cat /etc/os-release
[2025-06-04 16:31:13] 2025-06-04 14:31:02,210 | INFO     | cat /etc/os-release:
[2025-06-04 16:31:13] NAME="CentOS Linux"
[2025-06-04 16:31:13] VERSION="7 (Core)"
[2025-06-04 16:31:13] ID="centos"
[2025-06-04 16:31:13] ID_LIKE="rhel fedora"
[2025-06-04 16:31:13] VERSION_ID="7"
[2025-06-04 16:31:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 16:31:13] ANSI_COLOR="0;31"
[2025-06-04 16:31:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 16:31:13] HOME_URL="https://www.centos.org/"
[2025-06-04 16:31:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 16:31:13] 
[2025-06-04 16:31:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 16:31:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 16:31:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 16:31:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 16:31:13] 
[2025-06-04 16:31:13] 2025-06-04 14:31:02,210 | INFO     | **************************************
[2025-06-04 16:31:13] 2025-06-04 14:31:02,711 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 16:31:13] 2025-06-04 14:31:02,724 | INFO     | sufficient remaining disk space (322821947392 B)
[2025-06-04 16:31:13] 2025-06-04 14:31:02,724 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 16:31:13] 2025-06-04 14:31:02,724 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 16:31:13] 2025-06-04 14:31:02,724 | INFO     | update_server=False
[2025-06-04 16:31:13] 2025-06-04 14:31:02,724 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 16:31:13] 2025-06-04 14:31:02,724 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:31:13] 2025-06-04 14:31:02,724 | INFO     | aborting loop
[2025-06-04 16:31:13] 2025-06-04 14:31:02,724 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 16:31:13] 2025-06-04 14:31:02,725 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:31:13] 2025-06-04 14:31:02,725 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 16:31:13] 2025-06-04 14:31:02,725 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 16:31:13] 2025-06-04 14:31:02,725 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 16:31:13] 2025-06-04 14:31:02,725 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 16:31:13] 2025-06-04 14:31:02,725 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 16:31:13] 2025-06-04 14:31:02,899 | INFO     | all payload control threads have been joined
[2025-06-04 16:31:13] 2025-06-04 14:31:03,415 | INFO     | all data control threads have been joined
[2025-06-04 16:31:13] 2025-06-04 14:31:03,730 | INFO     | [job] retrieve thread has finished
[2025-06-04 16:31:13] 2025-06-04 14:31:03,731 | INFO     | [job] job monitor thread has finished
[2025-06-04 16:31:13] 2025-06-04 14:31:03,731 | INFO     | [job] queue monitor thread has finished
[2025-06-04 16:31:13] 2025-06-04 14:31:03,822 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 16:31:13] 2025-06-04 14:31:03,879 | INFO     | [payload] validate_post thread has finished
[2025-06-04 16:31:13] 2025-06-04 14:31:03,905 | INFO     | [payload] control thread has finished
[2025-06-04 16:31:13] 2025-06-04 14:31:04,225 | INFO     | all job control threads have been joined
[2025-06-04 16:31:13] 2025-06-04 14:31:04,231 | INFO     | [payload] failed_post thread has finished
[2025-06-04 16:31:13] 2025-06-04 14:31:04,421 | INFO     | [data] control thread has finished
[2025-06-04 16:31:13] 2025-06-04 14:31:04,482 | INFO     | [data] copytool_in thread has finished
[2025-06-04 16:31:13] 2025-06-04 14:31:04,548 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 16:31:13] 2025-06-04 14:31:04,731 | INFO     | [data] copytool_out thread has finished
[2025-06-04 16:31:13] 2025-06-04 14:31:04,992 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 16:31:13] 2025-06-04 14:31:05,086 | INFO     | [job] validate thread has finished
[2025-06-04 16:31:13] 2025-06-04 14:31:05,117 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 16:31:13] 2025-06-04 14:31:05,231 | INFO     | [job] control thread has finished
[2025-06-04 16:31:13] 2025-06-04 14:31:06,731 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 16:31:13] 2025-06-04 14:31:08,541 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140348669675328)>', '<ExcThread(monitor, started 140348013651712)>']
[2025-06-04 16:31:13] 2025-06-04 14:31:08,755 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 16:31:13] 2025-06-04 14:31:08,756 | INFO     | [monitor] control thread has ended
[2025-06-04 16:31:13] 2025-06-04 14:31:13,567 | INFO     | all workflow threads have been joined
[2025-06-04 16:31:13] 2025-06-04 14:31:13,568 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 16:31:13] 2025-06-04 14:31:13,568 | INFO     | traces error code: 0
[2025-06-04 16:31:13] 2025-06-04 14:31:13,569 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 16:31:13] 2025-06-04 14:31:13,616 [wrapper] ==== pilot stdout END ====
[2025-06-04 16:31:13] 2025-06-04 14:31:13,619 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 16:31:13] 2025-06-04 14:31:13,622 [wrapper] pilotpid: 788398
[2025-06-04 16:31:13] 2025-06-04 14:31:13,625 [wrapper] Pilot exit status: 0
[2025-06-04 16:31:13] 2025-06-04 14:31:13,632 [wrapper] pandaids: 6677921305
[2025-06-04 16:31:13] 2025-06-04 14:31:13,649 [wrapper] cleanup supervisor_pilot  806843 788399
[2025-06-04 16:31:13] 2025-06-04 14:31:13,652 [wrapper] Test setup, not cleaning
[2025-06-04 16:31:13] 2025-06-04 14:31:13,654 [wrapper] apfmon messages muted
[2025-06-04 16:31:13] 2025-06-04 14:31:13,657 [wrapper] ==== wrapper stdout END ====
[2025-06-04 16:31:13] 2025-06-04 14:31:13,660 [wrapper] ==== wrapper stderr END ====
[2025-06-04 16:31:13]  *** Error codes and diagnostics ***
[2025-06-04 16:31:13]     "exeErrorCode": 0,
[2025-06-04 16:31:13]     "exeErrorDiag": "",
[2025-06-04 16:31:13]     "pilotErrorCode": 0,
[2025-06-04 16:31:13]     "pilotErrorDiag": "",
[2025-06-04 16:31:13]  *** Listing of results directory ***
[2025-06-04 16:31:13] total 386024
[2025-06-04 16:31:13] -rw-r--r-- 1 boinc boinc    495897 Jun  3 19:46 pilot3.tar.gz
[2025-06-04 16:31:13] -rwx------ 1 boinc boinc     37140 Jun  3 20:36 runpilot2-wrapper.sh
[2025-06-04 16:31:13] -rw-r--r-- 1 boinc boinc      5111 Jun  3 20:36 queuedata.json
[2025-06-04 16:31:13] -rw-r--r-- 1 boinc boinc       100 Jun  4 15:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 16:31:13] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 15:11 run_atlas
[2025-06-04 16:31:13] -rw-r--r-- 1 boinc boinc       105 Jun  4 15:11 job.xml
[2025-06-04 16:31:13] -rw-r--r-- 2 boinc boinc 214796312 Jun  4 15:11 EVNT.45006593._001705.pool.root.1
[2025-06-04 16:31:13] -rw-r--r-- 1 boinc boinc      6683 Jun  4 15:11 init_data.xml
[2025-06-04 16:31:13] drwxrwx--x 2 boinc boinc      4096 Jun  4 15:11 shared
[2025-06-04 16:31:13] -rw-r--r-- 2 boinc boinc    508880 Jun  4 15:11 input.tar.gz
[2025-06-04 16:31:13] -rw-r--r-- 2 boinc boinc     15093 Jun  4 15:11 start_atlas.sh
[2025-06-04 16:31:13] -rw-r--r-- 1 boinc boinc         0 Jun  4 15:11 boinc_lockfile
[2025-06-04 16:31:13] -rw-r--r-- 1 boinc boinc      2525 Jun  4 15:11 pandaJob.out
[2025-06-04 16:31:13] -rw------- 1 boinc boinc    986811 Jun  4 15:12 agis_schedconf.cvmfs.json
[2025-06-04 16:31:13] -rw------- 1 boinc boinc   1598969 Jun  4 15:12 agis_ddmendpoints.agis.ALL.json
[2025-06-04 16:31:13] drwx------ 4 boinc boinc      4096 Jun  4 15:12 pilot3
[2025-06-04 16:31:13] -rw------- 1 boinc boinc        95 Jun  4 16:30 pilot_heartbeat.json
[2025-06-04 16:31:13] -rw------- 1 boinc boinc 175265337 Jun  4 16:30 HITS.45006595._042516.pool.root.1
[2025-06-04 16:31:13] -rw-r--r-- 1 boinc boinc       530 Jun  4 16:30 boinc_task_state.xml
[2025-06-04 16:31:13] -rw------- 1 boinc boinc      1017 Jun  4 16:30 memory_monitor_summary.json
[2025-06-04 16:31:13] -rw------- 1 boinc boinc    235171 Jun  4 16:30 log.45006595._042516.job.log.tgz.1
[2025-06-04 16:31:13] -rw------- 1 boinc boinc      7663 Jun  4 16:31 heartbeat.json
[2025-06-04 16:31:13] -rw-r--r-- 1 boinc boinc      8192 Jun  4 16:31 boinc_mmap_file
[2025-06-04 16:31:13] -rw------- 1 boinc boinc      4480 Jun  4 16:31 pilotlog.txt
[2025-06-04 16:31:13] -rw-r--r-- 1 boinc boinc        27 Jun  4 16:31 wrapper_checkpoint.txt
[2025-06-04 16:31:13] -rw------- 1 boinc boinc    461850 Jun  4 16:31 log.45006595._042516.job.log.1
[2025-06-04 16:31:13] -rw------- 1 boinc boinc       357 Jun  4 16:31 output.list
[2025-06-04 16:31:13] -rw-r--r-- 1 boinc boinc       620 Jun  4 16:31 runtime_log
[2025-06-04 16:31:13] -rw------- 1 boinc boinc    716800 Jun  4 16:31 result.tar.gz
[2025-06-04 16:31:13] -rw-r--r-- 1 boinc boinc      8753 Jun  4 16:31 runtime_log.err
[2025-06-04 16:31:13] -rw------- 1 boinc boinc       662 Jun  4 16:31 G0FNDmMglg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmsaZKDmDRyakn.diag
[2025-06-04 16:31:13] -rw-r--r-- 1 boinc boinc     22321 Jun  4 16:31 stderr.txt
[2025-06-04 16:31:13] HITS file was successfully produced:
[2025-06-04 16:31:13] -rw------- 1 boinc boinc 175265337 Jun  4 16:30 shared/HITS.pool.root.1
[2025-06-04 16:31:13]  *** Contents of shared directory: ***
[2025-06-04 16:31:13] total 382148
[2025-06-04 16:31:13] -rw-r--r-- 2 boinc boinc 214796312 Jun  4 15:11 ATLAS.root_0
[2025-06-04 16:31:13] -rw-r--r-- 2 boinc boinc    508880 Jun  4 15:11 input.tar.gz
[2025-06-04 16:31:13] -rw-r--r-- 2 boinc boinc     15093 Jun  4 15:11 start_atlas.sh
[2025-06-04 16:31:13] -rw------- 1 boinc boinc 175265337 Jun  4 16:30 HITS.pool.root.1
[2025-06-04 16:31:13] -rw------- 1 boinc boinc    716800 Jun  4 16:31 result.tar.gz
16:31:15 (784753): run_atlas exited; CPU time 13451.482159
16:31:15 (784753): called boinc_finish(0)

</stderr_txt>
]]>

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