Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:09:35 (3999281): wrapper (7.7.26015): starting
21:09:35 (3999281): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 21:09:35] Arguments: --nthreads 4
[2025-06-05 21:09:35] Threads: 4
[2025-06-05 21:09:35] Checking for CVMFS
[2025-06-05 21:09:35] No cvmfs_config command found, will try listing directly
[2025-06-05 21:09:35] CVMFS is ok
[2025-06-05 21:09:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 21:09:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 21:09:35] Further information can be found at the LHC@home message board.
[2025-06-05 21:09:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 21:09:35] Checking for apptainer binary...
[2025-06-05 21:09:35] which: no apptainer in ((null))
[2025-06-05 21:09:35] apptainer is not installed, using version from CVMFS
[2025-06-05 21:09:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 21:09:35] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2025-06-05 21:09:35] apptainer works
[2025-06-05 21:09:35] Set ATHENA_PROC_NUMBER=4
[2025-06-05 21:09:35] Set ATHENA_CORE_NUMBER=4
[2025-06-05 21:09:35] Starting ATLAS job with PandaID=6678150218
[2025-06-05 21:09:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 00:06:50]  *** The last 200 lines of the pilot log: ***
[2025-06-06 00:06:50] 2025-06-05 21:51:42,190 | INFO     | maximum number of monitored processes: 6
[2025-06-06 00:06:50] 2025-06-05 21:51:44,693 | INFO     | monitor loop #708: job 0:6678150218 is in state 'finished'
[2025-06-06 00:06:50] 2025-06-05 21:51:44,693 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 00:06:50] 2025-06-05 21:51:47,212 | INFO     | monitor loop #709: job 0:6678150218 is in state 'finished'
[2025-06-06 00:06:50] 2025-06-05 21:51:47,212 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 00:06:50] 2025-06-05 21:51:48,039 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 00:06:50] 2025-06-05 21:51:48,040 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6678150218/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 00:06:50] 2025-06-05 21:51:48,040 | INFO     | extracted standard info from prmon json
[2025-06-06 00:06:50] 2025-06-05 21:51:48,041 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 00:06:50] 2025-06-05 21:51:48,041 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 00:06:50] 2025-06-05 21:51:48,041 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 00:06:50] 2025-06-05 21:51:48,041 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 00:06:50] 2025-06-05 21:51:48,044 | INFO     | fitting pss+swap vs Time
[2025-06-06 00:06:50] 2025-06-05 21:51:48,045 | INFO     | sum of square deviations: 1246386160.0
[2025-06-06 00:06:50] 2025-06-05 21:51:48,046 | INFO     | sum of deviations: 22556872129.000004
[2025-06-06 00:06:50] 2025-06-05 21:51:48,046 | INFO     | mean x: 1749155434.0
[2025-06-06 00:06:50] 2025-06-05 21:51:48,046 | INFO     | mean y: 2311306.1635220125
[2025-06-06 00:06:50] 2025-06-05 21:51:48,046 | INFO     | -- intersect: -31653588546.32161
[2025-06-06 00:06:50] 2025-06-05 21:51:48,046 | INFO     | intersect: -31653588546.32161
[2025-06-06 00:06:50] 2025-06-05 21:51:48,047 | INFO     | chi2: 1.7371850254350458
[2025-06-06 00:06:50] 2025-06-05 21:51:48,047 | INFO     | sum of square deviations: 1132458442.5
[2025-06-06 00:06:50] 2025-06-05 21:51:48,048 | INFO     | sum of deviations: 21892220856.499996
[2025-06-06 00:06:50] 2025-06-05 21:51:48,048 | INFO     | mean x: 1749155281.5
[2025-06-06 00:06:50] 2025-06-05 21:51:48,048 | INFO     | mean y: 2310416.188311688
[2025-06-06 00:06:50] 2025-06-05 21:51:48,048 | INFO     | -- intersect: -33811640098.743206
[2025-06-06 00:06:50] 2025-06-05 21:51:48,048 | INFO     | intersect: -33811640098.743206
[2025-06-06 00:06:50] 2025-06-05 21:51:48,048 | INFO     | chi2: 1.7390075060539887
[2025-06-06 00:06:50] 2025-06-05 21:51:48,049 | INFO     | current chi2=1.7390075060539887 (change=-0.10490998899132523 %)
[2025-06-06 00:06:50] 2025-06-05 21:51:48,049 | INFO     | right removable region: 153
[2025-06-06 00:06:50] 2025-06-05 21:51:48,049 | INFO     | sum of square deviations: 1132458442.5
[2025-06-06 00:06:50] 2025-06-05 21:51:48,050 | INFO     | sum of deviations: -3697064362.4999995
[2025-06-06 00:06:50] 2025-06-05 21:51:48,050 | INFO     | mean x: 1749155586.5
[2025-06-06 00:06:50] 2025-06-05 21:51:48,050 | INFO     | mean y: 2346012.3441558443
[2025-06-06 00:06:50] 2025-06-05 21:51:48,050 | INFO     | -- intersect: 5712701942.969783
[2025-06-06 00:06:50] 2025-06-05 21:51:48,050 | INFO     | intersect: 5712701942.969783
[2025-06-06 00:06:50] 2025-06-05 21:51:48,050 | INFO     | chi2: 0.0025558190258447686
[2025-06-06 00:06:50] 2025-06-05 21:51:48,051 | INFO     | current chi2=0.0025558190258447686 (change=99.85287583139252 %)
[2025-06-06 00:06:50] 2025-06-05 21:51:48,051 | INFO     | sum of square deviations: 1025693650.0
[2025-06-06 00:06:50] 2025-06-05 21:51:48,052 | INFO     | sum of deviations: -3850563512.0000005
[2025-06-06 00:06:50] 2025-06-05 21:51:48,052 | INFO     | mean x: 1749155739.0
[2025-06-06 00:06:50] 2025-06-05 21:51:48,052 | INFO     | mean y: 2346225.389261745
[2025-06-06 00:06:50] 2025-06-05 21:51:48,052 | INFO     | -- intersect: 6568863689.350159
[2025-06-06 00:06:50] 2025-06-05 21:51:48,052 | INFO     | intersect: 6568863689.350159
[2025-06-06 00:06:50] 2025-06-05 21:51:48,052 | INFO     | chi2: 0.0019759791660303454
[2025-06-06 00:06:50] 2025-06-05 21:51:48,053 | INFO     | current chi2=0.0019759791660303454 (change=22.687046850774976 %)
[2025-06-06 00:06:50] 2025-06-05 21:51:48,053 | INFO     | left removable region: 20
[2025-06-06 00:06:50] 2025-06-05 21:51:48,053 | INFO     | sum of square deviations: 729472282.0
[2025-06-06 00:06:50] 2025-06-05 21:51:48,054 | INFO     | sum of deviations: -2687830068.0000005
[2025-06-06 00:06:50] 2025-06-05 21:51:48,054 | INFO     | mean x: 1749155861.0
[2025-06-06 00:06:50] 2025-06-05 21:51:48,054 | INFO     | mean y: 2344885.5789473685
[2025-06-06 00:06:50] 2025-06-05 21:51:48,054 | INFO     | -- intersect: 6447324129.9229145
[2025-06-06 00:06:50] 2025-06-05 21:51:48,054 | INFO     | intersect: 6447324129.9229145
[2025-06-06 00:06:50] 2025-06-05 21:51:48,054 | INFO     | chi2: 0.0017860614034393106
[2025-06-06 00:06:50] 2025-06-05 21:51:48,055 | INFO     | -- intersect: 6447324129.9229145
[2025-06-06 00:06:50] 2025-06-05 21:51:48,055 | INFO     | current memory leak: -3.68 B/s (using 133 data points, chi2=0.00)
[2025-06-06 00:06:50] 2025-06-05 21:51:48,055 | INFO     | ..............................
[2025-06-06 00:06:50] 2025-06-05 21:51:48,055 | INFO     | . Timing measurements:
[2025-06-06 00:06:50] 2025-06-05 21:51:48,055 | INFO     | . get job = 0 s
[2025-06-06 00:06:50] 2025-06-05 21:51:48,056 | INFO     | . initial setup = 1 s
[2025-06-06 00:06:50] 2025-06-05 21:51:48,056 | INFO     | . payload setup = 7 s
[2025-06-06 00:06:50] 2025-06-05 21:51:48,056 | INFO     | . stage-in = 0 s
[2025-06-06 00:06:50] 2025-06-05 21:51:48,056 | INFO     | . payload execution = 9681 s
[2025-06-06 00:06:50] 2025-06-05 21:51:48,056 | INFO     | . stage-out = 0 s
[2025-06-06 00:06:50] 2025-06-05 21:51:48,056 | INFO     | . log creation = 0 s
[2025-06-06 00:06:50] 2025-06-05 21:51:48,056 | INFO     | ..............................
[2025-06-06 00:06:50] 2025-06-05 21:51:48,157 | INFO     | 
[2025-06-06 00:06:50] 2025-06-05 21:51:48,157 | INFO     | job summary report
[2025-06-06 00:06:50] 2025-06-05 21:51:48,157 | INFO     | --------------------------------------------------
[2025-06-06 00:06:50] 2025-06-05 21:51:48,158 | INFO     | PanDA job id: 6678150218
[2025-06-06 00:06:50] 2025-06-05 21:51:48,158 | INFO     | task id: 45006595
[2025-06-06 00:06:50] 2025-06-05 21:51:48,158 | INFO     | errors: (none)
[2025-06-06 00:06:50] 2025-06-05 21:51:48,158 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 00:06:50] 2025-06-05 21:51:48,158 | INFO     | pilot state: finished 
[2025-06-06 00:06:50] 2025-06-05 21:51:48,158 | INFO     | transexitcode: 0
[2025-06-06 00:06:50] 2025-06-05 21:51:48,158 | INFO     | exeerrorcode: 0
[2025-06-06 00:06:50] 2025-06-05 21:51:48,158 | INFO     | exeerrordiag: 
[2025-06-06 00:06:50] 2025-06-05 21:51:48,158 | INFO     | exitcode: 0
[2025-06-06 00:06:50] 2025-06-05 21:51:48,158 | INFO     | exitmsg: OK
[2025-06-06 00:06:50] 2025-06-05 21:51:48,158 | INFO     | cpuconsumptiontime: 37169 s
[2025-06-06 00:06:50] 2025-06-05 21:51:48,158 | INFO     | nevents: 400
[2025-06-06 00:06:50] 2025-06-05 21:51:48,159 | INFO     | neventsw: 0
[2025-06-06 00:06:50] 2025-06-05 21:51:48,159 | INFO     | pid: 4024328
[2025-06-06 00:06:50] 2025-06-05 21:51:48,159 | INFO     | pgrp: 4024328
[2025-06-06 00:06:50] 2025-06-05 21:51:48,159 | INFO     | corecount: 4
[2025-06-06 00:06:50] 2025-06-05 21:51:48,159 | INFO     | event service: False
[2025-06-06 00:06:50] 2025-06-05 21:51:48,159 | INFO     | sizes: {0: 2397126, 1: 2397381, 6: 2397587, 12: 2397615, 9692: 2425992, 9695: 2434955, 9698: 2435139, 9705: 2435309}
[2025-06-06 00:06:50] 2025-06-05 21:51:48,159 | INFO     | --------------------------------------------------
[2025-06-06 00:06:50] 2025-06-05 21:51:48,159 | INFO     | 
[2025-06-06 00:06:50] 2025-06-05 21:51:48,159 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-06-06 00:06:50] 2025-06-05 21:51:48,182 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 00:06:50] 2025-06-05 21:51:48,182 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 00:06:50] 2025-06-05 21:51:48,183 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 00:06:50] 2025-06-05 21:51:48,183 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 00:06:50] 2025-06-05 21:51:48,183 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 00:06:50] 2025-06-05 21:51:48,183 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 00:06:50] 2025-06-05 21:51:48,183 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 00:06:50] 2025-06-05 21:51:48,183 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 00:06:50] 2025-06-05 21:51:48,183 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 00:06:50] 2025-06-05 21:51:48,183 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 00:06:50] 2025-06-05 21:51:48,183 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 00:06:50] 2025-06-05 21:51:48,183 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 00:06:50] 2025-06-05 21:51:48,184 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 00:06:50] 2025-06-05 21:51:48,184 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 00:06:50] 2025-06-05 21:51:48,184 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 00:06:50] 2025-06-05 21:51:48,184 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 00:06:50] 2025-06-05 21:51:48,184 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 00:06:50] 2025-06-05 21:51:48,184 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 00:06:50] 2025-06-05 21:51:48,184 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 00:06:50] 2025-06-05 21:51:48,184 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 00:06:50] 2025-06-05 21:51:48,184 | INFO     | job 6678150218 has completed (purged errors)
[2025-06-06 00:06:50] 2025-06-05 21:51:48,185 | INFO     | overall cleanup function is called
[2025-06-06 00:06:50] 2025-06-05 21:51:49,190 | INFO     | --- collectZombieJob: --- 10, [4024328]
[2025-06-06 00:06:50] 2025-06-05 21:51:49,191 | INFO     | zombie collector waiting for pid 4024328
[2025-06-06 00:06:50] 2025-06-05 21:51:49,191 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 00:06:50] 2025-06-05 21:51:49,191 | INFO     | collected zombie processes
[2025-06-06 00:06:50] 2025-06-05 21:51:49,191 | INFO     | will attempt to kill all subprocesses of pid=4024328
[2025-06-06 00:06:50] 2025-06-05 21:51:50,186 | INFO     | process IDs to be killed: [4024328] (in reverse order)
[2025-06-06 00:06:50] 2025-06-05 21:51:50,268 | INFO     | PID=4005155 has CPU usage=18.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-06 00:06:50] 2025-06-05 21:51:50,268 | INFO     | .. there are 7 such processes running
[2025-06-06 00:06:50] 2025-06-05 21:51:50,303 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 00:06:50] 2025-06-05 21:51:50,304 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 00:06:50] 2025-06-05 21:51:50,316 | INFO     | did not find any defunct processes belonging to 4024328
[2025-06-06 00:06:50] 2025-06-05 21:51:50,328 | INFO     | did not find any defunct processes belonging to 4024328
[2025-06-06 00:06:50] 2025-06-05 21:51:50,329 | INFO     | ready for new job
[2025-06-06 00:06:50] 2025-06-05 21:51:50,329 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 00:06:50] 2025-06-05 21:51:50,330 | INFO     | **************************************
[2025-06-06 00:06:50] 2025-06-05 21:51:50,331 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 00:06:50] 2025-06-05 21:51:50,331 | INFO     | **************************************
[2025-06-06 00:06:50] 2025-06-05 21:51:50,331 | INFO     | 
[2025-06-06 00:06:50] 2025-06-05 21:51:50,335 | INFO     | architecture information:
[2025-06-06 00:06:50] 2025-06-05 21:51:50,335 | INFO     | executing command: cat /etc/os-release
[2025-06-06 00:06:50] 2025-06-05 21:51:50,350 | INFO     | cat /etc/os-release:
[2025-06-06 00:06:50] NAME="CentOS Linux"
[2025-06-06 00:06:50] VERSION="7 (Core)"
[2025-06-06 00:06:50] ID="centos"
[2025-06-06 00:06:50] ID_LIKE="rhel fedora"
[2025-06-06 00:06:50] VERSION_ID="7"
[2025-06-06 00:06:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 00:06:50] ANSI_COLOR="0;31"
[2025-06-06 00:06:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 00:06:50] HOME_URL="https://www.centos.org/"
[2025-06-06 00:06:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 00:06:50] 
[2025-06-06 00:06:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 00:06:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 00:06:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 00:06:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 00:06:50] 
[2025-06-06 00:06:50] 2025-06-05 21:51:50,351 | INFO     | **************************************
[2025-06-06 00:06:50] 2025-06-05 21:51:50,854 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-06-06 00:06:50] 2025-06-05 21:51:50,872 | INFO     | sufficient remaining disk space (650586882048 B)
[2025-06-06 00:06:50] 2025-06-05 21:51:50,872 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 00:06:50] 2025-06-05 21:51:50,873 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 00:06:50] 2025-06-05 21:51:50,873 | INFO     | update_server=False
[2025-06-06 00:06:50] 2025-06-05 21:51:50,873 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 00:06:50] 2025-06-05 21:51:50,873 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 00:06:50] 2025-06-05 21:51:50,874 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 00:06:50] 2025-06-05 21:51:50,874 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 00:06:50] 2025-06-05 21:51:50,874 | INFO     | aborting loop
[2025-06-06 00:06:50] 2025-06-05 21:51:50,875 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 00:06:50] 2025-06-05 21:51:50,875 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 00:06:50] 2025-06-05 21:51:50,875 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 00:06:50] 2025-06-05 21:51:50,965 | INFO     | all job control threads have been joined
[2025-06-06 00:06:50] 2025-06-05 21:51:51,377 | INFO     | all payload control threads have been joined
[2025-06-06 00:06:50] 2025-06-05 21:51:51,479 | INFO     | all data control threads have been joined
[2025-06-06 00:06:50] 2025-06-05 21:51:51,488 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 00:06:50] 2025-06-05 21:51:51,876 | INFO     | [job] retrieve thread has finished
[2025-06-06 00:06:50] 2025-06-05 21:51:51,881 | INFO     | [job] job monitor thread has finished
[2025-06-06 00:06:50] 2025-06-05 21:51:51,970 | INFO     | [job] control thread has finished
[2025-06-06 00:06:50] 2025-06-05 21:51:52,086 | INFO     | [job] validate thread has finished
[2025-06-06 00:06:50] 2025-06-05 21:51:52,124 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 00:06:50] 2025-06-05 21:51:52,357 | INFO     | [payload] validate_post thread has finished
[2025-06-06 00:06:50] 2025-06-05 21:51:52,383 | INFO     | [payload] control thread has finished
[2025-06-06 00:06:50] 2025-06-05 21:51:52,485 | INFO     | [data] control thread has finished
[2025-06-06 00:06:50] 2025-06-05 21:51:52,579 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 00:06:50] 2025-06-05 21:51:52,643 | INFO     | [payload] failed_post thread has finished
[2025-06-06 00:06:50] 2025-06-05 21:51:52,821 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 00:06:50] 2025-06-05 21:51:52,826 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 00:06:50] 2025-06-05 21:51:52,880 | INFO     | [data] copytool_out thread has finished
[2025-06-06 00:06:50] 2025-06-05 21:51:52,961 | INFO     | [data] copytool_in thread has finished
[2025-06-06 00:06:50] 2025-06-05 21:51:53,167 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 00:06:50] 2025-06-05 21:51:54,172 | INFO     | [job] queue monitor thread has finished
[2025-06-06 00:06:50] 2025-06-05 21:51:55,490 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 00:06:50] 2025-06-05 21:51:55,611 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22931590629184)>', '<ExcThread(monitor, started 22931350451968)>']
[2025-06-06 00:06:50] 2025-06-05 21:51:55,901 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 00:06:50] 2025-06-05 21:51:55,902 | INFO     | [monitor] control thread has ended
[2025-06-06 00:06:50] 2025-06-05 21:52:00,634 | INFO     | all workflow threads have been joined
[2025-06-06 00:06:50] 2025-06-05 21:52:00,634 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 00:06:50] 2025-06-05 21:52:00,635 | INFO     | traces error code: 0
[2025-06-06 00:06:50] 2025-06-05 21:52:00,635 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 00:06:50] 2025-06-05 21:52:00,795 [wrapper] ==== pilot stdout END ====
[2025-06-06 00:06:50] 2025-06-05 21:52:00,798 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 00:06:50] 2025-06-05 21:52:00,800 [wrapper] pilotpid: 4005155
[2025-06-06 00:06:50] 2025-06-05 21:52:00,803 [wrapper] Pilot exit status: 0
[2025-06-06 00:06:50] 2025-06-05 21:52:00,814 [wrapper] pandaids: 6678150218
[2025-06-06 00:06:50] 2025-06-05 21:52:00,884 [wrapper] cleanup supervisor_pilot   66521 4005156
[2025-06-06 00:06:50] 2025-06-05 21:52:00,887 [wrapper] Test setup, not cleaning
[2025-06-06 00:06:50] 2025-06-05 21:52:00,889 [wrapper] apfmon messages muted
[2025-06-06 00:06:50] 2025-06-05 21:52:00,892 [wrapper] ==== wrapper stdout END ====
[2025-06-06 00:06:50] 2025-06-05 21:52:00,894 [wrapper] ==== wrapper stderr END ====
[2025-06-06 00:06:50]  *** Error codes and diagnostics ***
[2025-06-06 00:06:50]     "exeErrorCode": 0,
[2025-06-06 00:06:50]     "exeErrorDiag": "",
[2025-06-06 00:06:50]     "pilotErrorCode": 0,
[2025-06-06 00:06:50]     "pilotErrorDiag": "",
[2025-06-06 00:06:50]  *** Listing of results directory ***
[2025-06-06 00:06:50] total 394312
[2025-06-06 00:06:50] -rw-r--r-- 1 boinc boinc    495897 Jun  3 23:57 pilot3.tar.gz
[2025-06-06 00:06:50] -rwx------ 1 boinc boinc     37140 Jun  3 23:58 runpilot2-wrapper.sh
[2025-06-06 00:06:50] -rw-r--r-- 1 boinc boinc      5111 Jun  3 23:58 queuedata.json
[2025-06-06 00:06:50] -rw-r--r-- 1 boinc boinc       100 Jun  5 21:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 00:06:50] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 21:09 run_atlas
[2025-06-06 00:06:50] -rw-r--r-- 1 boinc boinc       105 Jun  5 21:09 job.xml
[2025-06-06 00:06:50] -rw-r--r-- 2 boinc boinc 215578707 Jun  5 21:09 EVNT.45006593._001873.pool.root.1
[2025-06-06 00:06:50] -rw-r--r-- 2 boinc boinc    508880 Jun  5 21:09 input.tar.gz
[2025-06-06 00:06:50] -rw-r--r-- 1 boinc boinc      6635 Jun  5 21:09 init_data.xml
[2025-06-06 00:06:50] -rw-r--r-- 2 boinc boinc     15093 Jun  5 21:09 start_atlas.sh
[2025-06-06 00:06:50] drwxrwx--x 2 boinc boinc      4096 Jun  5 21:09 shared
[2025-06-06 00:06:50] -rw-r--r-- 1 boinc boinc         0 Jun  5 21:09 boinc_lockfile
[2025-06-06 00:06:50] -rw-r--r-- 1 boinc boinc      2525 Jun  5 21:09 pandaJob.out
[2025-06-06 00:06:50] -rw------- 1 boinc boinc    987543 Jun  5 21:09 agis_schedconf.cvmfs.json
[2025-06-06 00:06:50] -rw------- 1 boinc boinc   1598969 Jun  5 21:09 agis_ddmendpoints.agis.ALL.json
[2025-06-06 00:06:50] drwx------ 4 boinc boinc      4096 Jun  5 21:09 pilot3
[2025-06-06 00:06:50] -rw------- 1 boinc boinc 181944143 Jun  5 23:51 HITS.45006595._046717.pool.root.1
[2025-06-06 00:06:50] -rw------- 1 boinc boinc        95 Jun  5 23:51 pilot_heartbeat.json
[2025-06-06 00:06:50] -rw-r--r-- 1 boinc boinc       528 Jun  5 23:51 boinc_task_state.xml
[2025-06-06 00:06:50] -rw------- 1 boinc boinc      1034 Jun  5 23:51 memory_monitor_summary.json
[2025-06-06 00:06:50] -rw------- 1 boinc boinc    290188 Jun  5 23:51 log.45006595._046717.job.log.tgz.1
[2025-06-06 00:06:50] -rw------- 1 boinc boinc      7720 Jun  5 23:51 heartbeat.json
[2025-06-06 00:06:50] -rw------- 1 boinc boinc      4486 Jun  5 23:52 pilotlog.txt
[2025-06-06 00:06:50] -rw------- 1 boinc boinc    918467 Jun  5 23:52 log.45006595._046717.job.log.1
[2025-06-06 00:06:50] -rw------- 1 boinc boinc       357 Jun  5 23:52 output.list
[2025-06-06 00:06:50] -rw-r--r-- 1 boinc boinc       620 Jun  5 23:52 runtime_log
[2025-06-06 00:06:50] -rw------- 1 boinc boinc   1228800 Jun  5 23:52 result.tar.gz
[2025-06-06 00:06:50] -rw------- 1 boinc boinc       662 Jun  5 23:52 dXrMDmDpog7n9Rq4apOajLDm4fhM0noT9bVof3QYDmj5ZKDm9qKnem.diag
[2025-06-06 00:06:50] -rw-r--r-- 1 boinc boinc      9025 Jun  5 23:52 runtime_log.err
[2025-06-06 00:06:50] -rw-r--r-- 1 boinc boinc        26 Jun  6 00:06 wrapper_checkpoint.txt
[2025-06-06 00:06:50] -rw-r--r-- 1 boinc boinc      8192 Jun  6 00:06 boinc_mmap_file
[2025-06-06 00:06:50] -rw-r--r-- 1 boinc boinc     20965 Jun  6 00:06 stderr.txt
[2025-06-06 00:06:50] HITS file was successfully produced:
[2025-06-06 00:06:50] -rw------- 1 boinc boinc 181944143 Jun  5 23:51 shared/HITS.pool.root.1
[2025-06-06 00:06:50]  *** Contents of shared directory: ***
[2025-06-06 00:06:50] total 389932
[2025-06-06 00:06:50] -rw-r--r-- 2 boinc boinc 215578707 Jun  5 21:09 ATLAS.root_0
[2025-06-06 00:06:50] -rw-r--r-- 2 boinc boinc    508880 Jun  5 21:09 input.tar.gz
[2025-06-06 00:06:50] -rw-r--r-- 2 boinc boinc     15093 Jun  5 21:09 start_atlas.sh
[2025-06-06 00:06:50] -rw------- 1 boinc boinc 181944143 Jun  5 23:51 HITS.pool.root.1
[2025-06-06 00:06:50] -rw------- 1 boinc boinc   1228800 Jun  5 23:52 result.tar.gz
00:06:52 (3999281): run_atlas exited; CPU time 37558.678331
00:06:52 (3999281): called boinc_finish(0)

</stderr_txt>
]]>

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