Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:18:26 (3806171): wrapper (7.7.26015): starting
16:18:26 (3806171): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 16:18:26] Arguments: --nthreads 4
[2025-06-05 16:18:26] Threads: 4
[2025-06-05 16:18:26] Checking for CVMFS
[2025-06-05 16:18:26] No cvmfs_config command found, will try listing directly
[2025-06-05 16:18:26] CVMFS is ok
[2025-06-05 16:18:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 16:18:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 16:18:26] Further information can be found at the LHC@home message board.
[2025-06-05 16:18:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 16:18:26] Checking for apptainer binary...
[2025-06-05 16:18:26] which: no apptainer in ((null))
[2025-06-05 16:18:26] apptainer is not installed, using version from CVMFS
[2025-06-05 16:18:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 16:18:26] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-06-05 16:18:26] apptainer works
[2025-06-05 16:18:26] Set ATHENA_PROC_NUMBER=4
[2025-06-05 16:18:26] Set ATHENA_CORE_NUMBER=4
[2025-06-05 16:18:26] Starting ATLAS job with PandaID=6678074929
[2025-06-05 16:18:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 18:58:38]  *** The last 200 lines of the pilot log: ***
[2025-06-05 18:58:38] 2025-06-05 16:54:01,049 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6678074929/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 18:58:38] 2025-06-05 16:54:01,050 | INFO     | extracted standard info from prmon json
[2025-06-05 18:58:38] 2025-06-05 16:54:01,051 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 18:58:38] 2025-06-05 16:54:01,051 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 18:58:38] 2025-06-05 16:54:01,051 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 18:58:38] 2025-06-05 16:54:01,051 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 18:58:38] 2025-06-05 16:54:01,054 | INFO     | fitting pss+swap vs Time
[2025-06-05 18:58:38] 2025-06-05 16:54:01,055 | INFO     | sum of square deviations: 1110539892.0
[2025-06-05 18:58:38] 2025-06-05 16:54:01,056 | INFO     | sum of deviations: -16307899515.00001
[2025-06-05 18:58:38] 2025-06-05 16:54:01,056 | INFO     | mean x: 1749137780.0
[2025-06-05 18:58:38] 2025-06-05 16:54:01,056 | INFO     | mean y: 2348018.522875817
[2025-06-05 18:58:38] 2025-06-05 16:54:01,056 | INFO     | -- intersect: 25687839696.59237
[2025-06-05 18:58:38] 2025-06-05 16:54:01,056 | INFO     | intersect: 25687839696.59237
[2025-06-05 18:58:38] 2025-06-05 16:54:01,056 | INFO     | chi2: 2.2637259229274953
[2025-06-05 18:58:38] 2025-06-05 16:54:01,057 | INFO     | sum of square deviations: 1005179777.0
[2025-06-05 18:58:38] 2025-06-05 16:54:01,057 | INFO     | sum of deviations: -6827983821.000001
[2025-06-05 18:58:38] 2025-06-05 16:54:01,058 | INFO     | mean x: 1749137627.5
[2025-06-05 18:58:38] 2025-06-05 16:54:01,058 | INFO     | mean y: 2361404.6756756757
[2025-06-05 18:58:38] 2025-06-05 16:54:01,058 | INFO     | -- intersect: 11883901099.910042
[2025-06-05 18:58:38] 2025-06-05 16:54:01,058 | INFO     | intersect: 11883901099.910042
[2025-06-05 18:58:38] 2025-06-05 16:54:01,058 | INFO     | chi2: 1.6058014940363432
[2025-06-05 18:58:38] 2025-06-05 16:54:01,058 | INFO     | current chi2=1.6058014940363432 (change=29.063784720029673 %)
[2025-06-05 18:58:38] 2025-06-05 16:54:01,059 | INFO     | sum of square deviations: 906703512.0
[2025-06-05 18:58:38] 2025-06-05 16:54:01,059 | INFO     | sum of deviations: -6267628975.999996
[2025-06-05 18:58:38] 2025-06-05 16:54:01,059 | INFO     | mean x: 1749137475.0
[2025-06-05 18:58:38] 2025-06-05 16:54:01,059 | INFO     | mean y: 2362272.832167832
[2025-06-05 18:58:38] 2025-06-05 16:54:01,060 | INFO     | -- intersect: 12093354064.774702
[2025-06-05 18:58:38] 2025-06-05 16:54:01,060 | INFO     | intersect: 12093354064.774702
[2025-06-05 18:58:38] 2025-06-05 16:54:01,060 | INFO     | chi2: 1.605331473755794
[2025-06-05 18:58:38] 2025-06-05 16:54:01,060 | INFO     | current chi2=1.605331473755794 (change=0.029270135959817006 %)
[2025-06-05 18:58:38] 2025-06-05 16:54:01,060 | INFO     | right removable region: 142
[2025-06-05 18:58:38] 2025-06-05 16:54:01,060 | INFO     | sum of square deviations: 1005179777.0
[2025-06-05 18:58:38] 2025-06-05 16:54:01,061 | INFO     | sum of deviations: -37674171447.99999
[2025-06-05 18:58:38] 2025-06-05 16:54:01,061 | INFO     | mean x: 1749137932.5
[2025-06-05 18:58:38] 2025-06-05 16:54:01,061 | INFO     | mean y: 2378451.364864865
[2025-06-05 18:58:38] 2025-06-05 16:54:01,061 | INFO     | -- intersect: 65560126292.1327
[2025-06-05 18:58:38] 2025-06-05 16:54:01,061 | INFO     | intersect: 65560126292.1327
[2025-06-05 18:58:38] 2025-06-05 16:54:01,062 | INFO     | chi2: 0.7745976145859028
[2025-06-05 18:58:38] 2025-06-05 16:54:01,062 | INFO     | current chi2=0.7745976145859028 (change=65.78218207687537 %)
[2025-06-05 18:58:38] 2025-06-05 16:54:01,062 | INFO     | sum of square deviations: 906703512.0
[2025-06-05 18:58:38] 2025-06-05 16:54:01,063 | INFO     | sum of deviations: -32573894409.0
[2025-06-05 18:58:38] 2025-06-05 16:54:01,063 | INFO     | mean x: 1749138085.0
[2025-06-05 18:58:38] 2025-06-05 16:54:01,063 | INFO     | mean y: 2370542.6223776224
[2025-06-05 18:58:38] 2025-06-05 16:54:01,063 | INFO     | -- intersect: 62841257271.838524
[2025-06-05 18:58:38] 2025-06-05 16:54:01,063 | INFO     | intersect: 62841257271.838524
[2025-06-05 18:58:38] 2025-06-05 16:54:01,063 | INFO     | chi2: 0.7640330651118
[2025-06-05 18:58:38] 2025-06-05 16:54:01,063 | INFO     | current chi2=0.7640330651118 (change=1.3638758079251978 %)
[2025-06-05 18:58:38] 2025-06-05 16:54:01,063 | INFO     | left removable region: 20
[2025-06-05 18:58:38] 2025-06-05 16:54:01,064 | INFO     | sum of square deviations: 563026370.5
[2025-06-05 18:58:38] 2025-06-05 16:54:01,064 | INFO     | sum of deviations: -14978725710.5
[2025-06-05 18:58:38] 2025-06-05 16:54:01,064 | INFO     | mean x: 1749138054.5
[2025-06-05 18:58:38] 2025-06-05 16:54:01,064 | INFO     | mean y: 2373761.9918032787
[2025-06-05 18:58:38] 2025-06-05 16:54:01,064 | INFO     | -- intersect: 46536356042.228714
[2025-06-05 18:58:38] 2025-06-05 16:54:01,065 | INFO     | intersect: 46536356042.228714
[2025-06-05 18:58:38] 2025-06-05 16:54:01,065 | INFO     | chi2: 0.05267555393792171
[2025-06-05 18:58:38] 2025-06-05 16:54:01,065 | INFO     | -- intersect: 46536356042.228714
[2025-06-05 18:58:38] 2025-06-05 16:54:01,065 | INFO     | current memory leak: -26.60 B/s (using 122 data points, chi2=0.05)
[2025-06-05 18:58:38] 2025-06-05 16:54:01,066 | INFO     | ..............................
[2025-06-05 18:58:38] 2025-06-05 16:54:01,066 | INFO     | . Timing measurements:
[2025-06-05 18:58:38] 2025-06-05 16:54:01,066 | INFO     | . get job = 0 s
[2025-06-05 18:58:38] 2025-06-05 16:54:01,066 | INFO     | . initial setup = 1 s
[2025-06-05 18:58:38] 2025-06-05 16:54:01,066 | INFO     | . payload setup = 7 s
[2025-06-05 18:58:38] 2025-06-05 16:54:01,066 | INFO     | . stage-in = 0 s
[2025-06-05 18:58:38] 2025-06-05 16:54:01,066 | INFO     | . payload execution = 9291 s
[2025-06-05 18:58:38] 2025-06-05 16:54:01,066 | INFO     | . stage-out = 0 s
[2025-06-05 18:58:38] 2025-06-05 16:54:01,066 | INFO     | . log creation = 0 s
[2025-06-05 18:58:38] 2025-06-05 16:54:01,066 | INFO     | ..............................
[2025-06-05 18:58:38] 2025-06-05 16:54:01,637 | INFO     | 
[2025-06-05 18:58:38] 2025-06-05 16:54:01,638 | INFO     | job summary report
[2025-06-05 18:58:38] 2025-06-05 16:54:01,638 | INFO     | --------------------------------------------------
[2025-06-05 18:58:38] 2025-06-05 16:54:01,638 | INFO     | PanDA job id: 6678074929
[2025-06-05 18:58:38] 2025-06-05 16:54:01,638 | INFO     | task id: 45006595
[2025-06-05 18:58:38] 2025-06-05 16:54:01,638 | INFO     | errors: (none)
[2025-06-05 18:58:38] 2025-06-05 16:54:01,638 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 18:58:38] 2025-06-05 16:54:01,638 | INFO     | pilot state: finished 
[2025-06-05 18:58:38] 2025-06-05 16:54:01,638 | INFO     | transexitcode: 0
[2025-06-05 18:58:38] 2025-06-05 16:54:01,638 | INFO     | exeerrorcode: 0
[2025-06-05 18:58:38] 2025-06-05 16:54:01,639 | INFO     | exeerrordiag: 
[2025-06-05 18:58:38] 2025-06-05 16:54:01,639 | INFO     | exitcode: 0
[2025-06-05 18:58:38] 2025-06-05 16:54:01,639 | INFO     | exitmsg: OK
[2025-06-05 18:58:38] 2025-06-05 16:54:01,639 | INFO     | cpuconsumptiontime: 35341 s
[2025-06-05 18:58:38] 2025-06-05 16:54:01,639 | INFO     | nevents: 400
[2025-06-05 18:58:38] 2025-06-05 16:54:01,639 | INFO     | neventsw: 0
[2025-06-05 18:58:38] 2025-06-05 16:54:01,639 | INFO     | pid: 3816995
[2025-06-05 18:58:38] 2025-06-05 16:54:01,639 | INFO     | pgrp: 3816995
[2025-06-05 18:58:38] 2025-06-05 16:54:01,639 | INFO     | corecount: 4
[2025-06-05 18:58:38] 2025-06-05 16:54:01,639 | INFO     | event service: False
[2025-06-05 18:58:38] 2025-06-05 16:54:01,639 | INFO     | sizes: {0: 2397182, 1: 2397381, 5: 2397587, 11: 2397643, 9302: 2425736, 9303: 2434699, 9304: 2434883, 9309: 2435053}
[2025-06-05 18:58:38] 2025-06-05 16:54:01,640 | INFO     | --------------------------------------------------
[2025-06-05 18:58:38] 2025-06-05 16:54:01,640 | INFO     | 
[2025-06-05 18:58:38] 2025-06-05 16:54:01,640 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2025-06-05 18:58:38] 2025-06-05 16:54:01,660 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 18:58:38] 2025-06-05 16:54:01,660 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 18:58:38] 2025-06-05 16:54:01,660 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 18:58:38] 2025-06-05 16:54:01,660 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 18:58:38] 2025-06-05 16:54:01,660 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 18:58:38] 2025-06-05 16:54:01,660 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 18:58:38] 2025-06-05 16:54:01,660 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 18:58:38] 2025-06-05 16:54:01,660 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 18:58:38] 2025-06-05 16:54:01,661 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 18:58:38] 2025-06-05 16:54:01,661 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 18:58:38] 2025-06-05 16:54:01,661 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 18:58:38] 2025-06-05 16:54:01,661 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 18:58:38] 2025-06-05 16:54:01,661 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 18:58:38] 2025-06-05 16:54:01,661 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 18:58:38] 2025-06-05 16:54:01,661 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 18:58:38] 2025-06-05 16:54:01,661 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 18:58:38] 2025-06-05 16:54:01,661 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 18:58:38] 2025-06-05 16:54:01,661 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 18:58:38] 2025-06-05 16:54:01,661 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 18:58:38] 2025-06-05 16:54:01,661 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 18:58:38] 2025-06-05 16:54:01,662 | INFO     | job 6678074929 has completed (purged errors)
[2025-06-05 18:58:38] 2025-06-05 16:54:01,662 | INFO     | overall cleanup function is called
[2025-06-05 18:58:38] 2025-06-05 16:54:02,669 | INFO     | --- collectZombieJob: --- 10, [3816995]
[2025-06-05 18:58:38] 2025-06-05 16:54:02,670 | INFO     | zombie collector waiting for pid 3816995
[2025-06-05 18:58:38] 2025-06-05 16:54:02,670 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 18:58:38] 2025-06-05 16:54:02,670 | INFO     | collected zombie processes
[2025-06-05 18:58:38] 2025-06-05 16:54:02,670 | INFO     | will attempt to kill all subprocesses of pid=3816995
[2025-06-05 18:58:38] 2025-06-05 16:54:03,034 | INFO     | process IDs to be killed: [3816995] (in reverse order)
[2025-06-05 18:58:38] 2025-06-05 16:54:03,140 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 18:58:38] 2025-06-05 16:54:03,141 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 18:58:38] 2025-06-05 16:54:03,154 | INFO     | did not find any defunct processes belonging to 3816995
[2025-06-05 18:58:38] 2025-06-05 16:54:03,168 | INFO     | did not find any defunct processes belonging to 3816995
[2025-06-05 18:58:38] 2025-06-05 16:54:03,168 | INFO     | ready for new job
[2025-06-05 18:58:38] 2025-06-05 16:54:03,169 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 18:58:38] 2025-06-05 16:54:03,171 | INFO     | **************************************
[2025-06-05 18:58:38] 2025-06-05 16:54:03,171 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 18:58:38] 2025-06-05 16:54:03,171 | INFO     | **************************************
[2025-06-05 18:58:38] 2025-06-05 16:54:03,171 | INFO     | 
[2025-06-05 18:58:38] 2025-06-05 16:54:03,176 | INFO     | architecture information:
[2025-06-05 18:58:38] 2025-06-05 16:54:03,176 | INFO     | executing command: cat /etc/os-release
[2025-06-05 18:58:38] 2025-06-05 16:54:03,192 | INFO     | cat /etc/os-release:
[2025-06-05 18:58:38] NAME="CentOS Linux"
[2025-06-05 18:58:38] VERSION="7 (Core)"
[2025-06-05 18:58:38] ID="centos"
[2025-06-05 18:58:38] ID_LIKE="rhel fedora"
[2025-06-05 18:58:38] VERSION_ID="7"
[2025-06-05 18:58:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 18:58:38] ANSI_COLOR="0;31"
[2025-06-05 18:58:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 18:58:38] HOME_URL="https://www.centos.org/"
[2025-06-05 18:58:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 18:58:38] 
[2025-06-05 18:58:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 18:58:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 18:58:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 18:58:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 18:58:38] 
[2025-06-05 18:58:38] 2025-06-05 16:54:03,193 | INFO     | **************************************
[2025-06-05 18:58:38] 2025-06-05 16:54:03,696 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2025-06-05 18:58:38] 2025-06-05 16:54:03,711 | INFO     | sufficient remaining disk space (662337224704 B)
[2025-06-05 18:58:38] 2025-06-05 16:54:03,711 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 18:58:38] 2025-06-05 16:54:03,712 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 18:58:38] 2025-06-05 16:54:03,712 | INFO     | update_server=False
[2025-06-05 18:58:38] 2025-06-05 16:54:03,712 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 18:58:38] 2025-06-05 16:54:03,712 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 18:58:38] 2025-06-05 16:54:03,712 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:58:38] 2025-06-05 16:54:03,713 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 18:58:38] 2025-06-05 16:54:03,714 | INFO     | aborting loop
[2025-06-05 18:58:38] 2025-06-05 16:54:03,714 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 18:58:38] 2025-06-05 16:54:03,714 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 18:58:38] 2025-06-05 16:54:03,956 | INFO     | all job control threads have been joined
[2025-06-05 18:58:38] 2025-06-05 16:54:04,171 | INFO     | all data control threads have been joined
[2025-06-05 18:58:38] 2025-06-05 16:54:04,667 | INFO     | all payload control threads have been joined
[2025-06-05 18:58:38] 2025-06-05 16:54:04,714 | INFO     | [job] retrieve thread has finished
[2025-06-05 18:58:38] 2025-06-05 16:54:04,719 | INFO     | [job] job monitor thread has finished
[2025-06-05 18:58:38] 2025-06-05 16:54:04,959 | INFO     | [job] control thread has finished
[2025-06-05 18:58:38] 2025-06-05 16:54:04,962 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 18:58:38] 2025-06-05 16:54:05,062 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 18:58:38] 2025-06-05 16:54:05,136 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 18:58:38] 2025-06-05 16:54:05,177 | INFO     | [data] control thread has finished
[2025-06-05 18:58:38] 2025-06-05 16:54:05,672 | INFO     | [payload] control thread has finished
[2025-06-05 18:58:38] 2025-06-05 16:54:05,700 | INFO     | [job] validate thread has finished
[2025-06-05 18:58:38] 2025-06-05 16:54:05,783 | INFO     | [payload] validate_post thread has finished
[2025-06-05 18:58:38] 2025-06-05 16:54:05,928 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 18:58:38] 2025-06-05 16:54:05,929 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 18:58:38] 2025-06-05 16:54:06,078 | INFO     | [data] copytool_in thread has finished
[2025-06-05 18:58:38] 2025-06-05 16:54:06,174 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 18:58:38] 2025-06-05 16:54:06,216 | INFO     | [payload] failed_post thread has finished
[2025-06-05 18:58:38] 2025-06-05 16:54:06,617 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 18:58:38] 2025-06-05 16:54:07,067 | INFO     | [data] copytool_out thread has finished
[2025-06-05 18:58:38] 2025-06-05 16:54:07,180 | INFO     | [job] queue monitor thread has finished
[2025-06-05 18:58:38] 2025-06-05 16:54:10,622 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 18:58:38] 2025-06-05 16:54:11,488 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22415290640192)>', '<ExcThread(monitor, started 22415046301440)>']
[2025-06-05 18:58:38] 2025-06-05 16:54:11,745 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 18:58:38] 2025-06-05 16:54:11,745 | INFO     | [monitor] control thread has ended
[2025-06-05 18:58:38] 2025-06-05 16:54:16,505 | INFO     | all workflow threads have been joined
[2025-06-05 18:58:38] 2025-06-05 16:54:16,505 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 18:58:38] 2025-06-05 16:54:16,506 | INFO     | traces error code: 0
[2025-06-05 18:58:38] 2025-06-05 16:54:16,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 18:58:38] 2025-06-05 16:54:16,672 [wrapper] ==== pilot stdout END ====
[2025-06-05 18:58:38] 2025-06-05 16:54:16,674 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 18:58:38] 2025-06-05 16:54:16,677 [wrapper] pilotpid: 3809855
[2025-06-05 18:58:38] 2025-06-05 16:54:16,679 [wrapper] Pilot exit status: 0
[2025-06-05 18:58:38] 2025-06-05 16:54:16,691 [wrapper] pandaids: 6678074929
[2025-06-05 18:58:38] 2025-06-05 16:54:16,763 [wrapper] cleanup supervisor_pilot 4122428 3809856
[2025-06-05 18:58:38] 2025-06-05 16:54:16,766 [wrapper] Test setup, not cleaning
[2025-06-05 18:58:38] 2025-06-05 16:54:16,769 [wrapper] apfmon messages muted
[2025-06-05 18:58:38] 2025-06-05 16:54:16,772 [wrapper] ==== wrapper stdout END ====
[2025-06-05 18:58:38] 2025-06-05 16:54:16,774 [wrapper] ==== wrapper stderr END ====
[2025-06-05 18:58:38]  *** Error codes and diagnostics ***
[2025-06-05 18:58:38]     "exeErrorCode": 0,
[2025-06-05 18:58:38]     "exeErrorDiag": "",
[2025-06-05 18:58:38]     "pilotErrorCode": 0,
[2025-06-05 18:58:38]     "pilotErrorDiag": "",
[2025-06-05 18:58:38]  *** Listing of results directory ***
[2025-06-05 18:58:38] total 389140
[2025-06-05 18:58:38] -rw-r--r-- 1 boinc boinc    495897 Jun  3 23:41 pilot3.tar.gz
[2025-06-05 18:58:38] -rw-r--r-- 1 boinc boinc      5111 Jun  3 23:46 queuedata.json
[2025-06-05 18:58:38] -rwx------ 1 boinc boinc     37140 Jun  3 23:46 runpilot2-wrapper.sh
[2025-06-05 18:58:38] -rw-r--r-- 1 boinc boinc       100 Jun  5 16:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 18:58:38] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 16:18 run_atlas
[2025-06-05 18:58:38] -rw-r--r-- 1 boinc boinc       105 Jun  5 16:18 job.xml
[2025-06-05 18:58:38] -rw-r--r-- 2 boinc boinc 214603888 Jun  5 16:18 EVNT.45006593._001854.pool.root.1
[2025-06-05 18:58:38] -rw-r--r-- 1 boinc boinc      6635 Jun  5 16:18 init_data.xml
[2025-06-05 18:58:38] -rw-r--r-- 2 boinc boinc     15093 Jun  5 16:18 start_atlas.sh
[2025-06-05 18:58:38] drwxrwx--x 2 boinc boinc      4096 Jun  5 16:18 shared
[2025-06-05 18:58:38] -rw-r--r-- 2 boinc boinc    508879 Jun  5 16:18 input.tar.gz
[2025-06-05 18:58:38] -rw-r--r-- 1 boinc boinc         0 Jun  5 16:18 boinc_lockfile
[2025-06-05 18:58:38] -rw-r--r-- 1 boinc boinc      2525 Jun  5 16:18 pandaJob.out
[2025-06-05 18:58:38] -rw------- 1 boinc boinc    983210 Jun  5 16:18 agis_schedconf.cvmfs.json
[2025-06-05 18:58:38] -rw------- 1 boinc boinc   1598969 Jun  5 16:18 agis_ddmendpoints.agis.ALL.json
[2025-06-05 18:58:38] drwx------ 4 boinc boinc      4096 Jun  5 16:18 pilot3
[2025-06-05 18:58:38] -rw------- 1 boinc boinc        95 Jun  5 18:53 pilot_heartbeat.json
[2025-06-05 18:58:38] -rw------- 1 boinc boinc 177702678 Jun  5 18:53 HITS.45006595._046216.pool.root.1
[2025-06-05 18:58:38] -rw-r--r-- 1 boinc boinc       529 Jun  5 18:53 boinc_task_state.xml
[2025-06-05 18:58:38] -rw------- 1 boinc boinc      1034 Jun  5 18:53 memory_monitor_summary.json
[2025-06-05 18:58:38] -rw------- 1 boinc boinc    283105 Jun  5 18:53 log.45006595._046216.job.log.tgz.1
[2025-06-05 18:58:38] -rw------- 1 boinc boinc      7722 Jun  5 18:54 heartbeat.json
[2025-06-05 18:58:38] -rw------- 1 boinc boinc      4486 Jun  5 18:54 pilotlog.txt
[2025-06-05 18:58:38] -rw------- 1 boinc boinc    885058 Jun  5 18:54 log.45006595._046216.job.log.1
[2025-06-05 18:58:38] -rw------- 1 boinc boinc       357 Jun  5 18:54 output.list
[2025-06-05 18:58:38] -rw-r--r-- 1 boinc boinc       620 Jun  5 18:54 runtime_log
[2025-06-05 18:58:38] -rw------- 1 boinc boinc   1187840 Jun  5 18:54 result.tar.gz
[2025-06-05 18:58:38] -rw-r--r-- 1 boinc boinc      9025 Jun  5 18:54 runtime_log.err
[2025-06-05 18:58:38] -rw------- 1 boinc boinc       662 Jun  5 18:54 ktAODm8dog7n9Rq4apOajLDm4fhM0noT9bVof3QYDmZ1ZKDmMudhbm.diag
[2025-06-05 18:58:38] -rw-r--r-- 1 boinc boinc        26 Jun  5 18:58 wrapper_checkpoint.txt
[2025-06-05 18:58:38] -rw-r--r-- 1 boinc boinc      8192 Jun  5 18:58 boinc_mmap_file
[2025-06-05 18:58:38] -rw-r--r-- 1 boinc boinc     20644 Jun  5 18:58 stderr.txt
[2025-06-05 18:58:38] HITS file was successfully produced:
[2025-06-05 18:58:38] -rw------- 1 boinc boinc 177702678 Jun  5 18:53 shared/HITS.pool.root.1
[2025-06-05 18:58:38]  *** Contents of shared directory: ***
[2025-06-05 18:58:38] total 384800
[2025-06-05 18:58:38] -rw-r--r-- 2 boinc boinc 214603888 Jun  5 16:18 ATLAS.root_0
[2025-06-05 18:58:38] -rw-r--r-- 2 boinc boinc     15093 Jun  5 16:18 start_atlas.sh
[2025-06-05 18:58:38] -rw-r--r-- 2 boinc boinc    508879 Jun  5 16:18 input.tar.gz
[2025-06-05 18:58:38] -rw------- 1 boinc boinc 177702678 Jun  5 18:53 HITS.pool.root.1
[2025-06-05 18:58:38] -rw------- 1 boinc boinc   1187840 Jun  5 18:54 result.tar.gz
18:58:40 (3806171): run_atlas exited; CPU time 35695.930686
18:58:40 (3806171): called boinc_finish(0)

</stderr_txt>
]]>

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