Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
14:32:05 (2941663): wrapper (7.7.26015): starting
14:32:05 (2941663): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 14:32:05] Arguments: --nthreads 3
[2025-06-04 14:32:05] Threads: 3
[2025-06-04 14:32:05] Checking for CVMFS
[2025-06-04 14:32:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 14:32:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 14:32:05] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 14:32:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 14:32:05] 2.9.2.0 2199589 2448 67904 146780 3 55 30196627 36864001 0 130560 0 2005318 99.992 601199 44140 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 14:32:05] CVMFS is ok
[2025-06-04 14:32:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 14:32:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 14:32:05] Further information can be found at the LHC@home message board.
[2025-06-04 14:32:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 14:32:05] Checking for apptainer binary...
[2025-06-04 14:32:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 14:32:05] Running /usr/bin/apptainer --version
[2025-06-04 14:32:05] apptainer version 1.3.6-6.1
[2025-06-04 14:32:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 14:32:05] cosA133a
[2025-06-04 14:32:05] apptainer works
[2025-06-04 14:32:05] Set ATHENA_PROC_NUMBER=3
[2025-06-04 14:32:05] Set ATHENA_CORE_NUMBER=3
[2025-06-04 14:32:05] Starting ATLAS job with PandaID=6678074440
[2025-06-04 14:32:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 15:53:05]  *** The last 200 lines of the pilot log: ***
[2025-06-04 15:53:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 15:53:05]  replicas=None
[2025-06-04 15:53:05]  scope=mc23_13p6TeV
[2025-06-04 15:53:05]  status=None
[2025-06-04 15:53:05]  status_code=0
[2025-06-04 15:53:05]  storage_token=
[2025-06-04 15:53:05]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6678074440/log.45006595._045953.job.log.tgz.1
[2025-06-04 15:53:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/24/4a/log.45006595._045953.job.log.tgz.1
[2025-06-04 15:53:05]  workdir=None
[2025-06-04 15:53:05] ]
[2025-06-04 15:53:05] 2025-06-04 13:52:35,564 | INFO     | transferring file log.45006595._045953.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6678074440/log.45006595._045953.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 15:53:05] 2025-06-04 13:52:35,564 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6678074440/log.45006595._045953.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0459
[2025-06-04 15:53:05] 2025-06-04 13:52:35,576 | INFO     | adding to output.list: log.45006595._045953.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/24/4a/log.45006595._045953.job.log.tg
[2025-06-04 15:53:05] 2025-06-04 13:52:35,576 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 15:53:05] 2025-06-04 13:52:35,576 | INFO     | summary of transferred files:
[2025-06-04 15:53:05] 2025-06-04 13:52:35,576 | INFO     |  -- lfn=log.45006595._045953.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 15:53:05] 2025-06-04 13:52:35,576 | INFO     | stage-out finished correctly
[2025-06-04 15:53:05] 2025-06-04 13:52:36,256 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 15:53:05] 2025-06-04 13:52:36,401 | WARNING  | process 2951800 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 15:53:05] 2025-06-04 13:52:36,401 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678074440/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 15:53:05] 2025-06-04 13:52:36,433 | INFO     | number of running child processes to parent process 2951800: 1
[2025-06-04 15:53:05] 2025-06-04 13:52:36,433 | INFO     | maximum number of monitored processes: 6
[2025-06-04 15:53:05] 2025-06-04 13:52:36,746 | INFO     | job 6678074440 has state=finished
[2025-06-04 15:53:05] 2025-06-04 13:52:36,747 | INFO     | preparing for final server update for job 6678074440 in state='finished'
[2025-06-04 15:53:05] 2025-06-04 13:52:36,748 | INFO     | this job has now completed (state=finished)
[2025-06-04 15:53:05] 2025-06-04 13:52:36,748 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 15:53:05] 2025-06-04 13:52:36,748 | INFO     | log transfer has been attempted: DONE
[2025-06-04 15:53:05] 2025-06-04 13:52:36,749 | INFO     | job 6678074440 has finished - writing final server update
[2025-06-04 15:53:05] 2025-06-04 13:52:36,749 | INFO     | total number of processed events: 400 (read)
[2025-06-04 15:53:05] 2025-06-04 13:52:36,752 | INFO     | executing command: lscpu
[2025-06-04 15:53:05] 2025-06-04 13:52:36,768 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 15:53:05] 2025-06-04 13:52:38,937 | INFO     | monitor loop #372: job 0:6678074440 is in state 'finished'
[2025-06-04 15:53:05] 2025-06-04 13:52:38,937 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 15:53:05] 2025-06-04 13:52:40,321 | INFO     | 4825s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 15:53:05] 2025-06-04 13:52:41,440 | INFO     | monitor loop #373: job 0:6678074440 is in state 'finished'
[2025-06-04 15:53:05] 2025-06-04 13:52:41,441 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 15:53:05] 2025-06-04 13:52:43,944 | INFO     | monitor loop #374: job 0:6678074440 is in state 'finished'
[2025-06-04 15:53:05] 2025-06-04 13:52:43,944 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 15:53:05] 2025-06-04 13:52:44,722 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 15:53:05] 2025-06-04 13:52:44,722 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678074440/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 15:53:05] 2025-06-04 13:52:44,722 | INFO     | extracted standard info from prmon json
[2025-06-04 15:53:05] 2025-06-04 13:52:44,722 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 15:53:05] 2025-06-04 13:52:44,722 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 15:53:05] 2025-06-04 13:52:44,722 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 15:53:05] 2025-06-04 13:52:44,722 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 15:53:05] 2025-06-04 13:52:44,723 | INFO     | fitting pss+swap vs Time
[2025-06-04 15:53:05] 2025-06-04 13:52:44,723 | INFO     | sum of square deviations: 115715658.0
[2025-06-04 15:53:05] 2025-06-04 13:52:44,723 | INFO     | sum of deviations: -9764787219.0
[2025-06-04 15:53:05] 2025-06-04 13:52:44,723 | INFO     | mean x: 1749042833.5
[2025-06-04 15:53:05] 2025-06-04 13:52:44,723 | INFO     | mean y: 2520948.027777778
[2025-06-04 15:53:05] 2025-06-04 13:52:44,723 | INFO     | -- intersect: 147597335696.81784
[2025-06-04 15:53:05] 2025-06-04 13:52:44,724 | INFO     | intersect: 147597335696.81784
[2025-06-04 15:53:05] 2025-06-04 13:52:44,724 | INFO     | chi2: 0.0452251977260242
[2025-06-04 15:53:05] 2025-06-04 13:52:44,724 | INFO     | -- intersect: 147597335696.81784
[2025-06-04 15:53:05] 2025-06-04 13:52:44,724 | INFO     | current memory leak: -84.39 B/s (using 72 data points, chi2=0.05)
[2025-06-04 15:53:05] 2025-06-04 13:52:44,724 | INFO     | ..............................
[2025-06-04 15:53:05] 2025-06-04 13:52:44,724 | INFO     | . Timing measurements:
[2025-06-04 15:53:05] 2025-06-04 13:52:44,724 | INFO     | . get job = 0 s
[2025-06-04 15:53:05] 2025-06-04 13:52:44,724 | INFO     | . initial setup = 1 s
[2025-06-04 15:53:05] 2025-06-04 13:52:44,724 | INFO     | . payload setup = 7 s
[2025-06-04 15:53:05] 2025-06-04 13:52:44,724 | INFO     | . stage-in = 0 s
[2025-06-04 15:53:05] 2025-06-04 13:52:44,724 | INFO     | . payload execution = 4792 s
[2025-06-04 15:53:05] 2025-06-04 13:52:44,724 | INFO     | . stage-out = 0 s
[2025-06-04 15:53:05] 2025-06-04 13:52:44,724 | INFO     | . log creation = 0 s
[2025-06-04 15:53:05] 2025-06-04 13:52:44,724 | INFO     | ..............................
[2025-06-04 15:53:05] 2025-06-04 13:52:44,755 | INFO     | 
[2025-06-04 15:53:05] 2025-06-04 13:52:44,755 | INFO     | job summary report
[2025-06-04 15:53:05] 2025-06-04 13:52:44,756 | INFO     | --------------------------------------------------
[2025-06-04 15:53:05] 2025-06-04 13:52:44,756 | INFO     | PanDA job id: 6678074440
[2025-06-04 15:53:05] 2025-06-04 13:52:44,756 | INFO     | task id: 45006595
[2025-06-04 15:53:05] 2025-06-04 13:52:44,756 | INFO     | errors: (none)
[2025-06-04 15:53:05] 2025-06-04 13:52:44,756 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 15:53:05] 2025-06-04 13:52:44,756 | INFO     | pilot state: finished 
[2025-06-04 15:53:05] 2025-06-04 13:52:44,756 | INFO     | transexitcode: 0
[2025-06-04 15:53:05] 2025-06-04 13:52:44,756 | INFO     | exeerrorcode: 0
[2025-06-04 15:53:05] 2025-06-04 13:52:44,756 | INFO     | exeerrordiag: 
[2025-06-04 15:53:05] 2025-06-04 13:52:44,756 | INFO     | exitcode: 0
[2025-06-04 15:53:05] 2025-06-04 13:52:44,756 | INFO     | exitmsg: OK
[2025-06-04 15:53:05] 2025-06-04 13:52:44,756 | INFO     | cpuconsumptiontime: 13736 s
[2025-06-04 15:53:05] 2025-06-04 13:52:44,756 | INFO     | nevents: 400
[2025-06-04 15:53:05] 2025-06-04 13:52:44,756 | INFO     | neventsw: 0
[2025-06-04 15:53:05] 2025-06-04 13:52:44,756 | INFO     | pid: 2951800
[2025-06-04 15:53:05] 2025-06-04 13:52:44,756 | INFO     | pgrp: 2951800
[2025-06-04 15:53:05] 2025-06-04 13:52:44,756 | INFO     | corecount: 3
[2025-06-04 15:53:05] 2025-06-04 13:52:44,756 | INFO     | event service: False
[2025-06-04 15:53:05] 2025-06-04 13:52:44,756 | INFO     | sizes: {0: 2397345, 5: 2397551, 11: 2397607, 4803: 2432753, 4804: 2432753, 4813: 2432923}
[2025-06-04 15:53:05] 2025-06-04 13:52:44,756 | INFO     | --------------------------------------------------
[2025-06-04 15:53:05] 2025-06-04 13:52:44,756 | INFO     | 
[2025-06-04 15:53:05] 2025-06-04 13:52:44,756 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 15:53:05] 2025-06-04 13:52:44,768 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 15:53:05] 2025-06-04 13:52:44,768 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 15:53:05] 2025-06-04 13:52:44,768 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 15:53:05] 2025-06-04 13:52:44,768 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 15:53:05] 2025-06-04 13:52:44,768 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 15:53:05] 2025-06-04 13:52:44,768 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 15:53:05] 2025-06-04 13:52:44,768 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 15:53:05] 2025-06-04 13:52:44,768 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 15:53:05] 2025-06-04 13:52:44,768 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 15:53:05] 2025-06-04 13:52:44,768 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 15:53:05] 2025-06-04 13:52:44,768 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 15:53:05] 2025-06-04 13:52:44,768 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 15:53:05] 2025-06-04 13:52:44,768 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 15:53:05] 2025-06-04 13:52:44,769 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 15:53:05] 2025-06-04 13:52:44,769 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 15:53:05] 2025-06-04 13:52:44,769 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 15:53:05] 2025-06-04 13:52:44,769 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 15:53:05] 2025-06-04 13:52:44,769 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 15:53:05] 2025-06-04 13:52:44,769 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 15:53:05] 2025-06-04 13:52:44,769 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 15:53:05] 2025-06-04 13:52:44,769 | INFO     | job 6678074440 has completed (purged errors)
[2025-06-04 15:53:05] 2025-06-04 13:52:44,769 | INFO     | overall cleanup function is called
[2025-06-04 15:53:05] 2025-06-04 13:52:45,775 | INFO     | --- collectZombieJob: --- 10, [2951800]
[2025-06-04 15:53:05] 2025-06-04 13:52:45,776 | INFO     | zombie collector waiting for pid 2951800
[2025-06-04 15:53:05] 2025-06-04 13:52:45,776 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 15:53:05] 2025-06-04 13:52:45,776 | INFO     | collected zombie processes
[2025-06-04 15:53:05] 2025-06-04 13:52:45,776 | INFO     | will attempt to kill all subprocesses of pid=2951800
[2025-06-04 15:53:05] 2025-06-04 13:52:45,815 | INFO     | process IDs to be killed: [2951800] (in reverse order)
[2025-06-04 15:53:05] 2025-06-04 13:52:45,840 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 15:53:05] 2025-06-04 13:52:45,840 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 15:53:05] 2025-06-04 13:52:45,841 | INFO     | did not find any defunct processes belonging to 2951800
[2025-06-04 15:53:05] 2025-06-04 13:52:45,842 | INFO     | did not find any defunct processes belonging to 2951800
[2025-06-04 15:53:05] 2025-06-04 13:52:45,842 | INFO     | ready for new job
[2025-06-04 15:53:05] 2025-06-04 13:52:45,842 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 15:53:05] 2025-06-04 13:52:45,842 | INFO     | **************************************
[2025-06-04 15:53:05] 2025-06-04 13:52:45,843 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 15:53:05] 2025-06-04 13:52:45,843 | INFO     | **************************************
[2025-06-04 15:53:05] 2025-06-04 13:52:45,843 | INFO     | 
[2025-06-04 15:53:05] 2025-06-04 13:52:45,843 | INFO     | architecture information:
[2025-06-04 15:53:05] 2025-06-04 13:52:45,843 | INFO     | executing command: cat /etc/os-release
[2025-06-04 15:53:05] 2025-06-04 13:52:45,852 | INFO     | cat /etc/os-release:
[2025-06-04 15:53:05] NAME="CentOS Linux"
[2025-06-04 15:53:05] VERSION="7 (Core)"
[2025-06-04 15:53:05] ID="centos"
[2025-06-04 15:53:05] ID_LIKE="rhel fedora"
[2025-06-04 15:53:05] VERSION_ID="7"
[2025-06-04 15:53:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 15:53:05] ANSI_COLOR="0;31"
[2025-06-04 15:53:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 15:53:05] HOME_URL="https://www.centos.org/"
[2025-06-04 15:53:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 15:53:05] 
[2025-06-04 15:53:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 15:53:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 15:53:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 15:53:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 15:53:05] 
[2025-06-04 15:53:05] 2025-06-04 13:52:45,852 | INFO     | **************************************
[2025-06-04 15:53:05] 2025-06-04 13:52:46,355 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 15:53:05] 2025-06-04 13:52:46,369 | INFO     | sufficient remaining disk space (325279809536 B)
[2025-06-04 15:53:05] 2025-06-04 13:52:46,369 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 15:53:05] 2025-06-04 13:52:46,369 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 15:53:05] 2025-06-04 13:52:46,369 | INFO     | update_server=False
[2025-06-04 15:53:05] 2025-06-04 13:52:46,369 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 15:53:05] 2025-06-04 13:52:46,369 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:53:05] 2025-06-04 13:52:46,369 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 15:53:05] 2025-06-04 13:52:46,448 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 15:53:05] 2025-06-04 13:52:46,448 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 15:53:05] 2025-06-04 13:52:46,449 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:53:05] 2025-06-04 13:52:46,449 | INFO     | will abort loop
[2025-06-04 15:53:05] 2025-06-04 13:52:46,798 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 15:53:05] 2025-06-04 13:52:47,340 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 15:53:05] 2025-06-04 13:52:47,340 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 15:53:05] 2025-06-04 13:52:47,340 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 15:53:05] 2025-06-04 13:52:47,347 | INFO     | all payload control threads have been joined
[2025-06-04 15:53:05] 2025-06-04 13:52:47,375 | INFO     | [job] retrieve thread has finished
[2025-06-04 15:53:05] 2025-06-04 13:52:47,375 | INFO     | [job] queue monitor thread has finished
[2025-06-04 15:53:05] 2025-06-04 13:52:47,400 | INFO     | all data control threads have been joined
[2025-06-04 15:53:05] 2025-06-04 13:52:47,451 | INFO     | [job] job monitor thread has finished
[2025-06-04 15:53:05] 2025-06-04 13:52:47,471 | INFO     | [payload] validate_post thread has finished
[2025-06-04 15:53:05] 2025-06-04 13:52:47,527 | INFO     | all job control threads have been joined
[2025-06-04 15:53:05] 2025-06-04 13:52:47,876 | INFO     | [job] validate thread has finished
[2025-06-04 15:53:05] 2025-06-04 13:52:47,943 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 15:53:05] 2025-06-04 13:52:47,944 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 15:53:05] 2025-06-04 13:52:47,992 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 15:53:05] 2025-06-04 13:52:48,316 | INFO     | [data] copytool_in thread has finished
[2025-06-04 15:53:05] 2025-06-04 13:52:48,353 | INFO     | [payload] control thread has finished
[2025-06-04 15:53:05] 2025-06-04 13:52:48,375 | INFO     | [data] copytool_out thread has finished
[2025-06-04 15:53:05] 2025-06-04 13:52:48,406 | INFO     | [data] control thread has finished
[2025-06-04 15:53:05] 2025-06-04 13:52:48,511 | INFO     | [payload] failed_post thread has finished
[2025-06-04 15:53:05] 2025-06-04 13:52:48,533 | INFO     | [job] control thread has finished
[2025-06-04 15:53:05] 2025-06-04 13:52:50,806 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 15:53:05] 2025-06-04 13:52:57,393 | INFO     | job.realtimelogging is not enabled
[2025-06-04 15:53:05] 2025-06-04 13:52:58,399 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 15:53:05] 2025-06-04 13:53:00,168 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139973234157376)>', '<ExcThread(monitor, started 139972883494656)>']
[2025-06-04 15:53:05] 2025-06-04 13:53:00,409 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 15:53:05] 2025-06-04 13:53:00,409 | INFO     | [monitor] control thread has ended
[2025-06-04 15:53:05] 2025-06-04 13:53:05,180 | INFO     | all workflow threads have been joined
[2025-06-04 15:53:05] 2025-06-04 13:53:05,180 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 15:53:05] 2025-06-04 13:53:05,180 | INFO     | traces error code: 0
[2025-06-04 15:53:05] 2025-06-04 13:53:05,181 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 15:53:05] 2025-06-04 13:53:05,227 [wrapper] ==== pilot stdout END ====
[2025-06-04 15:53:05] 2025-06-04 13:53:05,230 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 15:53:05] 2025-06-04 13:53:05,233 [wrapper] pilotpid: 2945303
[2025-06-04 15:53:05] 2025-06-04 13:53:05,236 [wrapper] Pilot exit status: 0
[2025-06-04 15:53:05] 2025-06-04 13:53:05,244 [wrapper] pandaids: 6678074440
[2025-06-04 15:53:05] 2025-06-04 13:53:05,259 [wrapper] cleanup supervisor_pilot 2963860 2945304
[2025-06-04 15:53:05] 2025-06-04 13:53:05,261 [wrapper] Test setup, not cleaning
[2025-06-04 15:53:05] 2025-06-04 13:53:05,264 [wrapper] apfmon messages muted
[2025-06-04 15:53:05] 2025-06-04 13:53:05,266 [wrapper] ==== wrapper stdout END ====
[2025-06-04 15:53:05] 2025-06-04 13:53:05,269 [wrapper] ==== wrapper stderr END ====
[2025-06-04 15:53:05]  *** Error codes and diagnostics ***
[2025-06-04 15:53:05]     "exeErrorCode": 0,
[2025-06-04 15:53:05]     "exeErrorDiag": "",
[2025-06-04 15:53:05]     "pilotErrorCode": 0,
[2025-06-04 15:53:05]     "pilotErrorDiag": "",
[2025-06-04 15:53:05]  *** Listing of results directory ***
[2025-06-04 15:53:05] total 390096
[2025-06-04 15:53:05] -rw-r--r-- 1 boinc boinc    495897 Jun  3 23:15 pilot3.tar.gz
[2025-06-04 15:53:05] -rw-r--r-- 1 boinc boinc      5111 Jun  3 23:27 queuedata.json
[2025-06-04 15:53:05] -rwx------ 1 boinc boinc     37140 Jun  3 23:28 runpilot2-wrapper.sh
[2025-06-04 15:53:05] -rw-r--r-- 1 boinc boinc       100 Jun  4 14:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 15:53:05] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 14:32 run_atlas
[2025-06-04 15:53:05] -rw-r--r-- 1 boinc boinc       105 Jun  4 14:32 job.xml
[2025-06-04 15:53:05] -rw-r--r-- 2 boinc boinc 214664949 Jun  4 14:32 EVNT.45006593._001843.pool.root.1
[2025-06-04 15:53:05] -rw-r--r-- 1 boinc boinc      6682 Jun  4 14:32 init_data.xml
[2025-06-04 15:53:05] drwxrwx--x 2 boinc boinc      4096 Jun  4 14:32 shared
[2025-06-04 15:53:05] -rw-r--r-- 2 boinc boinc    508879 Jun  4 14:32 input.tar.gz
[2025-06-04 15:53:05] -rw-r--r-- 2 boinc boinc     15093 Jun  4 14:32 start_atlas.sh
[2025-06-04 15:53:05] -rw-r--r-- 1 boinc boinc         0 Jun  4 14:32 boinc_lockfile
[2025-06-04 15:53:05] -rw-r--r-- 1 boinc boinc      2525 Jun  4 14:32 pandaJob.out
[2025-06-04 15:53:05] -rw------- 1 boinc boinc    986811 Jun  4 14:32 agis_schedconf.cvmfs.json
[2025-06-04 15:53:05] -rw------- 1 boinc boinc   1598969 Jun  4 14:32 agis_ddmendpoints.agis.ALL.json
[2025-06-04 15:53:05] drwx------ 4 boinc boinc      4096 Jun  4 14:32 pilot3
[2025-06-04 15:53:05] -rw------- 1 boinc boinc 179557538 Jun  4 15:52 HITS.45006595._045953.pool.root.1
[2025-06-04 15:53:05] -rw-r--r-- 1 boinc boinc       529 Jun  4 15:52 boinc_task_state.xml
[2025-06-04 15:53:05] -rw------- 1 boinc boinc      1019 Jun  4 15:52 memory_monitor_summary.json
[2025-06-04 15:53:05] -rw------- 1 boinc boinc    230542 Jun  4 15:52 log.45006595._045953.job.log.tgz.1
[2025-06-04 15:53:05] -rw------- 1 boinc boinc        95 Jun  4 15:52 pilot_heartbeat.json
[2025-06-04 15:53:05] -rw-r--r-- 1 boinc boinc      8192 Jun  4 15:52 boinc_mmap_file
[2025-06-04 15:53:05] -rw-r--r-- 1 boinc boinc        27 Jun  4 15:52 wrapper_checkpoint.txt
[2025-06-04 15:53:05] -rw------- 1 boinc boinc      7678 Jun  4 15:52 heartbeat.json
[2025-06-04 15:53:05] -rw------- 1 boinc boinc      4615 Jun  4 15:53 pilotlog.txt
[2025-06-04 15:53:05] -rw------- 1 boinc boinc    471165 Jun  4 15:53 log.45006595._045953.job.log.1
[2025-06-04 15:53:05] -rw------- 1 boinc boinc       357 Jun  4 15:53 output.list
[2025-06-04 15:53:05] -rw-r--r-- 1 boinc boinc       620 Jun  4 15:53 runtime_log
[2025-06-04 15:53:05] -rw------- 1 boinc boinc    716800 Jun  4 15:53 result.tar.gz
[2025-06-04 15:53:05] -rw-r--r-- 1 boinc boinc      8743 Jun  4 15:53 runtime_log.err
[2025-06-04 15:53:05] -rw------- 1 boinc boinc       660 Jun  4 15:53 Ye8MDmgMog7n9Rq4apOajLDm4fhM0noT9bVof3QYDmuyZKDmyqmurm.diag
[2025-06-04 15:53:05] -rw-r--r-- 1 boinc boinc     21789 Jun  4 15:53 stderr.txt
[2025-06-04 15:53:05] HITS file was successfully produced:
[2025-06-04 15:53:05] -rw------- 1 boinc boinc 179557538 Jun  4 15:52 shared/HITS.pool.root.1
[2025-06-04 15:53:05]  *** Contents of shared directory: ***
[2025-06-04 15:53:05] total 386212
[2025-06-04 15:53:05] -rw-r--r-- 2 boinc boinc 214664949 Jun  4 14:32 ATLAS.root_0
[2025-06-04 15:53:05] -rw-r--r-- 2 boinc boinc    508879 Jun  4 14:32 input.tar.gz
[2025-06-04 15:53:05] -rw-r--r-- 2 boinc boinc     15093 Jun  4 14:32 start_atlas.sh
[2025-06-04 15:53:05] -rw------- 1 boinc boinc 179557538 Jun  4 15:52 HITS.pool.root.1
[2025-06-04 15:53:05] -rw------- 1 boinc boinc    716800 Jun  4 15:53 result.tar.gz
15:53:06 (2941663): run_atlas exited; CPU time 13757.717869
15:53:06 (2941663): called boinc_finish(0)

</stderr_txt>
]]>

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