Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-04 17:19:40 (11104): Detected: vboxwrapper 26206
2025-06-04 17:19:40 (11104): Detected: BOINC client v8.0.2
2025-06-04 17:19:41 (11104): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-06-04 17:19:41 (11104): Successfully copied 'init_data.xml' to the shared directory.
2025-06-04 17:19:42 (11104): Create VM. (boinc_5e0e3ce43df6e38c, slot#5)
2025-06-04 17:19:42 (11104): Setting Memory Size for VM. (4800MB)
2025-06-04 17:19:43 (11104): Setting CPU Count for VM. (8)
2025-06-04 17:19:43 (11104): Setting Chipset Options for VM.
2025-06-04 17:19:43 (11104): Setting Graphics Controller Options for VM.
2025-06-04 17:19:43 (11104): Setting Boot Options for VM.
2025-06-04 17:19:44 (11104): Setting Network Configuration for NAT.
2025-06-04 17:19:44 (11104): Enabling VM Network Access.
2025-06-04 17:19:44 (11104): Disabling USB Support for VM.
2025-06-04 17:19:45 (11104): Disabling COM Port Support for VM.
2025-06-04 17:19:45 (11104): Disabling LPT Port Support for VM.
2025-06-04 17:19:45 (11104): Disabling Audio Support for VM.
2025-06-04 17:19:45 (11104): Disabling Clipboard Support for VM.
2025-06-04 17:19:46 (11104): Disabling Drag and Drop Support for VM.
2025-06-04 17:19:46 (11104): Adding storage controller(s) to VM.
2025-06-04 17:19:46 (11104): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-04 17:19:49 (11104): Adding VirtualBox Guest Additions to VM.
2025-06-04 17:19:49 (11104): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-04 17:19:49 (11104): forwarding host port 59897 to guest port 80
2025-06-04 17:19:50 (11104): Enabling remote desktop for VM.
2025-06-04 17:19:50 (11104): Required extension pack not installed, remote desktop not enabled.
2025-06-04 17:19:50 (11104): Enabling shared directory for VM.
2025-06-04 17:19:51 (11104): Starting VM using VBoxManage interface. (boinc_5e0e3ce43df6e38c, slot#5)
2025-06-04 17:19:55 (11104): Successfully started VM. (PID = '19912')
2025-06-04 17:19:55 (11104): Reporting VM Process ID to BOINC.
2025-06-04 17:19:55 (11104): Guest Log: BIOS: VirtualBox 7.0.6
2025-06-04 17:19:55 (11104): Guest Log: CPUID EDX: 0x178bfbff
2025-06-04 17:19:55 (11104): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-04 17:19:55 (11104): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-04 17:19:55 (11104): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-04 17:19:55 (11104): Detected: Web Application Enabled (http://localhost:59897)
2025-06-04 17:19:55 (11104): Preference change detected
2025-06-04 17:19:55 (11104): Setting CPU throttle for VM. (100%)
2025-06-04 17:19:56 (11104): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 800 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-04 17:19:57 (11104): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-04 17:19:57 (11104): Guest Log: BIOS: Booting from Hard Disk...
2025-06-04 17:19:59 (11104): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-04 17:19:59 (11104): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-04 17:19:59 (11104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-04 17:19:59 (11104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-04 17:19:59 (11104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-04 17:19:59 (11104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-04 17:19:59 (11104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-04 17:19:59 (11104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-04 17:19:59 (11104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-04 17:19:59 (11104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-04 17:19:59 (11104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-04 17:19:59 (11104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-04 17:19:59 (11104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-04 17:19:59 (11104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-04 17:19:59 (11104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-04 17:19:59 (11104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-04 17:19:59 (11104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-04 17:19:59 (11104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-04 17:19:59 (11104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-04 17:19:59 (11104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-04 17:19:59 (11104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-04 17:19:59 (11104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-04 17:19:59 (11104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-04 17:19:59 (11104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-04 17:19:59 (11104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-04 17:19:59 (11104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-04 17:19:59 (11104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-04 17:19:59 (11104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-04 17:19:59 (11104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-04 17:19:59 (11104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-04 17:19:59 (11104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-04 17:19:59 (11104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-04 17:20:04 (11104): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-04 17:20:04 (11104): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-04 17:20:08 (11104): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-04 17:20:08 (11104): Guest Log: 00:00:00.000069 main     Log opened 2025-06-04T17:20:06.568425000Z
2025-06-04 17:20:08 (11104): Guest Log: 00:00:00.000129 main     OS Product: Linux
2025-06-04 17:20:08 (11104): Guest Log: 00:00:00.000152 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-04 17:20:08 (11104): Guest Log: 00:00:00.000170 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-04 17:20:08 (11104): Guest Log: 00:00:00.000186 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-04 17:20:08 (11104): Guest Log: 00:00:00.000186 main     Process ID: 1365
2025-06-04 17:20:08 (11104): Guest Log: 00:00:00.000186 main     Package type: LINUX_64BITS_GENERIC
2025-06-04 17:20:08 (11104): Guest Log: 00:00:00.000623 main     5.2.32 r132073 started. Verbose level = 0
2025-06-04 17:20:08 (11104): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-04 17:20:08 (11104): Guest Log: [INFO] Mounting shared directory
2025-06-04 17:20:08 (11104): Guest Log: [INFO] Checking for init_data.xml
2025-06-04 17:20:11 (11104): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-04 17:20:11 (11104): Guest Log: [INFO] Detected branch: prod
2025-06-04 17:20:11 (11104): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-04 17:20:11 (11104): Guest Log: Copying input files
2025-06-04 17:20:12 (11104): Guest Log: Copied input files into RunAtlas.
2025-06-04 17:20:12 (11104): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-04 17:20:12 (11104): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-04 17:20:12 (11104): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-04 17:20:12 (11104): Guest Log: Further information can be found at the LHC@home message board.
2025-06-04 17:20:18 (11104): Guest Log: 00:00:10.018025 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 187 864 242 000ns (GuestNow=1 749 050 418 705 553 000 ns GuestLast=1 749 057 606 569 795 000 ns fSetTimeLastLoop=true )
2025-06-04 17:20:25 (11104): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-04 17:20:25 (11104): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-04 17:20:25 (11104): Guest Log: 2.6.3.0 1642 0 30164 146786 4 1 3117617 4096000 0 65024 0 0 n/a 1 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-06-04 17:20:26 (11104): Guest Log: copied the webapp to /var/www
2025-06-04 17:20:26 (11104): Guest Log: ATHENA_PROC_NUMBER=8
2025-06-04 17:20:26 (11104): Guest Log: ATHENA_CORE_NUMBER=8
2025-06-04 17:20:26 (11104): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-04 17:20:26 (11104): Guest Log:  *** Starting ATLAS job. (PandaID=6678074812 taskID=45006595) ***
2025-06-04 18:22:24 (11104): Guest Log:  *** Job finished ***
2025-06-04 18:22:24 (11104): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-04 18:22:24 (11104): Guest Log: 2025-06-04 16:22:09,839 | INFO     | [data] copytool_out thread has finished
2025-06-04 18:22:24 (11104): Guest Log: 2025-06-04 16:22:11,257 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-06-04 18:22:24 (11104): Guest Log: 2025-06-04 16:22:15,315 | INFO     | [data] queue_monitor thread has finished
2025-06-04 18:22:24 (11104): Guest Log: 2025-06-04 16:22:17,221 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139891482961728)>', '<ExcThread(monitor, started 139890742245120)>']
2025-06-04 18:22:24 (11104): Guest Log: 2025-06-04 16:22:17,498 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-04 18:22:24 (11104): Guest Log: 2025-06-04 16:22:17,498 | INFO     | [monitor] control thread has ended
2025-06-04 18:22:24 (11104): Guest Log: 2025-06-04 16:22:22,339 | INFO     | all workflow threads have been joined
2025-06-04 18:22:24 (11104): Guest Log: 2025-06-04 16:22:22,339 | INFO     | end of generic workflow (traces error code: 0)
2025-06-04 18:22:24 (11104): Guest Log: 2025-06-04 16:22:22,339 | INFO     | traces error code: 0
2025-06-04 18:22:24 (11104): Guest Log: 2025-06-04 16:22:22,339 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-04 18:22:24 (11104): Guest Log: 2025-06-04 16:22:22,390 [wrapper] ==== pilot stdout END ====
2025-06-04 18:22:24 (11104): Guest Log: 2025-06-04 16:22:22,392 [wrapper] ==== wrapper stdout RESUME ====
2025-06-04 18:22:24 (11104): Guest Log: 2025-06-04 16:22:22,395 [wrapper] pilotpid: 5996
2025-06-04 18:22:24 (11104): Guest Log: 2025-06-04 16:22:22,397 [wrapper] Pilot exit status: 0
2025-06-04 18:22:24 (11104): Guest Log: 2025-06-04 16:22:22,464 [wrapper] pandaids: 6678074812
2025-06-04 18:22:24 (11104): Guest Log: 2025-06-04 16:22:22,483 [wrapper] cleanup supervisor_pilot 31187 5997
2025-06-04 18:22:24 (11104): Guest Log: 2025-06-04 16:22:22,486 [wrapper] Test setup, not cleaning
2025-06-04 18:22:24 (11104): Guest Log: 2025-06-04 16:22:22,490 [wrapper] apfmon messages muted
2025-06-04 18:22:24 (11104): Guest Log: 2025-06-04 16:22:22,494 [wrapper] ==== wrapper stdout END ====
2025-06-04 18:22:24 (11104): Guest Log: 2025-06-04 16:22:22,497 [wrapper] ==== wrapper stderr END ====
2025-06-04 18:22:24 (11104): Guest Log:  *** Error codes and diagnostics ***
2025-06-04 18:22:24 (11104): Guest Log:     "exeErrorCode": 0,
2025-06-04 18:22:24 (11104): Guest Log:     "exeErrorDiag": "",
2025-06-04 18:22:24 (11104): Guest Log:     "pilotErrorCode": 0,
2025-06-04 18:22:24 (11104): Guest Log:     "pilotErrorDiag": "",
2025-06-04 18:22:24 (11104): Guest Log:  *** Listing of results directory ***
2025-06-04 18:22:24 (11104): Guest Log: total 176536
2025-06-04 18:22:24 (11104): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  3 21:41 pilot3.tar.gz
2025-06-04 18:22:24 (11104): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  3 21:43 queuedata.json
2025-06-04 18:22:24 (11104): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  3 21:43 runpilot2-wrapper.sh
2025-06-04 18:22:24 (11104): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  4 15:20 start_atlas.sh
2025-06-04 18:22:24 (11104): Guest Log: -rwxr-xr-x. 1 atlas atlas    508885 Jun  4 15:20 input.tar.gz
2025-06-04 18:22:24 (11104): Guest Log: -rwxr-xr-x. 1 atlas atlas      9242 Jun  4 15:20 init_data.xml
2025-06-04 18:22:24 (11104): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  4 15:20 EVNT.45006593._001849.pool.root.1 -> /data/./ATLAS.root_0
2025-06-04 18:22:24 (11104): Guest Log: -rw-r--r--. 1 atlas atlas      2525 Jun  4 15:20 pandaJob.out
2025-06-04 18:22:24 (11104): Guest Log: -rw-------. 1 atlas atlas    990989 Jun  4 15:21 agis_schedconf.cvmfs.json
2025-06-04 18:22:24 (11104): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  4 15:21 agis_ddmendpoints.agis.ALL.json
2025-06-04 18:22:24 (11104): Guest Log: drwx------. 4 atlas atlas      4096 Jun  4 15:21 pilot3
2025-06-04 18:22:24 (11104): Guest Log: -rw-------. 1 atlas atlas 175733734 Jun  4 16:21 HITS.45006595._046099.pool.root.1
2025-06-04 18:22:24 (11104): Guest Log: -rw-------. 1 atlas atlas      1024 Jun  4 16:21 memory_monitor_summary.json
2025-06-04 18:22:24 (11104): Guest Log: -rw-------. 1 atlas atlas    292398 Jun  4 16:21 log.45006595._046099.job.log.tgz.1
2025-06-04 18:22:24 (11104): Guest Log: -rw-------. 1 atlas atlas        95 Jun  4 16:21 pilot_heartbeat.json
2025-06-04 18:22:24 (11104): Guest Log: -rw-------. 1 atlas atlas      7702 Jun  4 16:22 heartbeat.json
2025-06-04 18:22:24 (11104): Guest Log: -rw-------. 1 atlas atlas      4413 Jun  4 16:22 pilotlog.txt
2025-06-04 18:22:24 (11104): Guest Log: -rw-------. 1 atlas atlas    346892 Jun  4 16:22 log.45006595._046099.job.log.1
2025-06-04 18:22:24 (11104): Guest Log: -rw-------. 1 atlas atlas       357 Jun  4 16:22 output.list
2025-06-04 18:22:24 (11104): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  4 16:22 runtime_log
2025-06-04 18:22:24 (11104): Guest Log: -rw-------. 1 atlas atlas    655360 Jun  4 16:22 result.tar.gz
2025-06-04 18:22:24 (11104): Guest Log: -rw-r--r--. 1 atlas atlas      8586 Jun  4 16:22 runtime_log.err
2025-06-04 18:22:24 (11104): Guest Log: -rw-------. 1 atlas atlas       649 Jun  4 16:22 Ic0MDmMbog7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkGmKDml5PTUo.diag
2025-06-04 18:22:24 (11104): Guest Log: Looking for outputfile HITS.45006595._046099.pool.root.1
2025-06-04 18:22:24 (11104): Guest Log: HITS file was successfully produced
2025-06-04 18:22:24 (11104): Guest Log: -rw-------. 1 atlas atlas 175733734 Jun  4 16:21 /home/atlas/RunAtlas/HITS.45006595._046099.pool.root.1
2025-06-04 18:22:25 (11104): Guest Log: Successfully finished the ATLAS job!
2025-06-04 18:22:25 (11104): Guest Log: Copying the results back to the shared directory!
2025-06-04 18:22:25 (11104): Guest Log:  *** Contents of shared directory: ***
2025-06-04 18:22:25 (11104): Guest Log: total 384696
2025-06-04 18:22:25 (11104): Guest Log: -rwxrwxrwx. 1 root root 216994038 Jun  4 15:19 ATLAS.root_0
2025-06-04 18:22:25 (11104): Guest Log: -rwxrwxrwx. 1 root root 175733734 Jun  4  2025 HITS.pool.root.1
2025-06-04 18:22:25 (11104): Guest Log: -rwxrwxrwx. 1 root root      9242 Jun  4 15:19 init_data.xml
2025-06-04 18:22:25 (11104): Guest Log: -rwxrwxrwx. 1 root root    508885 Jun  4 02:39 input.tar.gz
2025-06-04 18:22:25 (11104): Guest Log: -rwxrwxrwx. 1 root root    655360 Jun  4  2025 result.tar.gz
2025-06-04 18:22:25 (11104): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  4 02:39 start_atlas.sh
2025-06-04 18:22:25 (11104): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-04 18:22:25 (11104): VM Completion File Detected.
2025-06-04 18:22:25 (11104): Powering off VM.
2025-06-04 18:22:26 (11104): Successfully stopped VM.
2025-06-04 18:22:26 (11104): Deregistering VM. (boinc_5e0e3ce43df6e38c, slot#5)
2025-06-04 18:22:26 (11104): Removing network bandwidth throttle group from VM.
2025-06-04 18:22:27 (11104): Removing VM from VirtualBox.
18:22:32 (11104): called boinc_finish(0)

</stderr_txt>
]]>

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