Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:49:05 (27384): wrapper (7.7.26015): starting
12:49:05 (27384): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 12:49:05] Arguments: --nthreads 8
[2025-06-04 12:49:05] Threads: 8
[2025-06-04 12:49:05] Checking for CVMFS
[2025-06-04 12:49:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 12:49:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 12:49:05] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 12:49:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 12:49:07] 2.11.2.0 5632 33103 94244 146777 2 94 20731950 25165824 3749 130560 0 16886096 99.783 19974942 2138 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 12:49:07] CVMFS is ok
[2025-06-04 12:49:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:49:07] Checking for apptainer binary...
[2025-06-04 12:49:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 12:49:07] Running /usr/bin/apptainer --version
[2025-06-04 12:49:07] apptainer version 1.3.2-1.el7
[2025-06-04 12:49:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:49:23] cg-vwn252.simple-grid.lan
[2025-06-04 12:49:23] apptainer works
[2025-06-04 12:49:23] Set ATHENA_PROC_NUMBER=8
[2025-06-04 12:49:23] Set ATHENA_CORE_NUMBER=8
[2025-06-04 12:49:23] Starting ATLAS job with PandaID=6678075700
[2025-06-04 12:49:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 16:54:26]  *** The last 200 lines of the pilot log: ***
[2025-06-04 16:54:26] 2025-06-04 14:48:22,756 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6678075700/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 16:54:26] 2025-06-04 14:48:22,757 | INFO     | extracted standard info from prmon json
[2025-06-04 16:54:26] 2025-06-04 14:48:22,757 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 16:54:26] 2025-06-04 14:48:22,757 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 16:54:26] 2025-06-04 14:48:22,758 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 16:54:26] 2025-06-04 14:48:22,758 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 16:54:26] 2025-06-04 14:48:22,763 | INFO     | fitting pss+swap vs Time
[2025-06-04 16:54:26] 2025-06-04 14:48:22,763 | INFO     | sum of square deviations: 3438620752.0
[2025-06-04 16:54:26] 2025-06-04 14:48:22,765 | INFO     | sum of deviations: 95977652784.0
[2025-06-04 16:54:26] 2025-06-04 14:48:22,765 | INFO     | mean x: 1749041615.0
[2025-06-04 16:54:26] 2025-06-04 14:48:22,765 | INFO     | mean y: 2410619.33632287
[2025-06-04 16:54:26] 2025-06-04 14:48:22,766 | INFO     | -- intersect: -48816264348.41034
[2025-06-04 16:54:26] 2025-06-04 14:48:22,766 | INFO     | intersect: -48816264348.41034
[2025-06-04 16:54:26] 2025-06-04 14:48:22,766 | INFO     | chi2: 6.303033659861664
[2025-06-04 16:54:26] 2025-06-04 14:48:22,767 | INFO     | sum of square deviations: 3212467674.5
[2025-06-04 16:54:26] 2025-06-04 14:48:22,768 | INFO     | sum of deviations: 108213203065.5
[2025-06-04 16:54:26] 2025-06-04 14:48:22,768 | INFO     | mean x: 1749041462.5
[2025-06-04 16:54:26] 2025-06-04 14:48:22,769 | INFO     | mean y: 2418689.729357798
[2025-06-04 16:54:26] 2025-06-04 14:48:22,769 | INFO     | -- intersect: -58914712353.76049
[2025-06-04 16:54:26] 2025-06-04 14:48:22,769 | INFO     | intersect: -58914712353.76049
[2025-06-04 16:54:26] 2025-06-04 14:48:22,769 | INFO     | chi2: 5.57988852706782
[2025-06-04 16:54:26] 2025-06-04 14:48:22,769 | INFO     | current chi2=5.57988852706782 (change=11.472969554310064 %)
[2025-06-04 16:54:26] 2025-06-04 14:48:22,769 | INFO     | right removable region: 217
[2025-06-04 16:54:26] 2025-06-04 14:48:22,770 | INFO     | sum of square deviations: 3212467674.5
[2025-06-04 16:54:26] 2025-06-04 14:48:22,772 | INFO     | sum of deviations: 19805391367.0
[2025-06-04 16:54:26] 2025-06-04 14:48:22,772 | INFO     | mean x: 1749041767.5
[2025-06-04 16:54:26] 2025-06-04 14:48:22,772 | INFO     | mean y: 2461939.211009174
[2025-06-04 16:54:26] 2025-06-04 14:48:22,772 | INFO     | -- intersect: -10780668112.971846
[2025-06-04 16:54:26] 2025-06-04 14:48:22,772 | INFO     | intersect: -10780668112.971846
[2025-06-04 16:54:26] 2025-06-04 14:48:22,772 | INFO     | chi2: 1.589241038564996
[2025-06-04 16:54:26] 2025-06-04 14:48:22,773 | INFO     | current chi2=1.589241038564996 (change=74.78609310488949 %)
[2025-06-04 16:54:26] 2025-06-04 14:48:22,773 | INFO     | sum of square deviations: 2996454322.0
[2025-06-04 16:54:26] 2025-06-04 14:48:22,775 | INFO     | sum of deviations: -6114158283.0
[2025-06-04 16:54:26] 2025-06-04 14:48:22,775 | INFO     | mean x: 1749041920.0
[2025-06-04 16:54:26] 2025-06-04 14:48:22,775 | INFO     | mean y: 2480077.708920188
[2025-06-04 16:54:26] 2025-06-04 14:48:22,775 | INFO     | -- intersect: 3571337798.6384044
[2025-06-04 16:54:26] 2025-06-04 14:48:22,775 | INFO     | intersect: 3571337798.6384044
[2025-06-04 16:54:26] 2025-06-04 14:48:22,776 | INFO     | chi2: 0.838532467497119
[2025-06-04 16:54:26] 2025-06-04 14:48:22,776 | INFO     | current chi2=0.838532467497119 (change=47.23692333956646 %)
[2025-06-04 16:54:26] 2025-06-04 14:48:22,776 | INFO     | sum of square deviations: 2790348132.0
[2025-06-04 16:54:26] 2025-06-04 14:48:22,778 | INFO     | sum of deviations: -11759397823.5
[2025-06-04 16:54:26] 2025-06-04 14:48:22,778 | INFO     | mean x: 1749042072.5
[2025-06-04 16:54:26] 2025-06-04 14:48:22,778 | INFO     | mean y: 2484238.1201923075
[2025-06-04 16:54:26] 2025-06-04 14:48:22,778 | INFO     | -- intersect: 7373493362.284356
[2025-06-04 16:54:26] 2025-06-04 14:48:22,778 | INFO     | intersect: 7373493362.284356
[2025-06-04 16:54:26] 2025-06-04 14:48:22,779 | INFO     | chi2: 0.7940498715220667
[2025-06-04 16:54:26] 2025-06-04 14:48:22,779 | INFO     | current chi2=0.7940498715220667 (change=5.304814983232006 %)
[2025-06-04 16:54:26] 2025-06-04 14:48:22,779 | INFO     | left removable region: 30
[2025-06-04 16:54:26] 2025-06-04 14:48:22,779 | INFO     | sum of square deviations: 2027639878.0
[2025-06-04 16:54:26] 2025-06-04 14:48:22,781 | INFO     | sum of deviations: 2143330648.0000002
[2025-06-04 16:54:26] 2025-06-04 14:48:22,781 | INFO     | mean x: 1749042347.0
[2025-06-04 16:54:26] 2025-06-04 14:48:22,781 | INFO     | mean y: 2494500.470588235
[2025-06-04 16:54:26] 2025-06-04 14:48:22,781 | INFO     | -- intersect: -1846342715.4716363
[2025-06-04 16:54:26] 2025-06-04 14:48:22,781 | INFO     | intersect: -1846342715.4716363
[2025-06-04 16:54:26] 2025-06-04 14:48:22,782 | INFO     | chi2: 0.0022083945820059424
[2025-06-04 16:54:26] 2025-06-04 14:48:22,782 | INFO     | -- intersect: -1846342715.4716363
[2025-06-04 16:54:26] 2025-06-04 14:48:22,782 | INFO     | current memory leak: 1.06 B/s (using 187 data points, chi2=0.00)
[2025-06-04 16:54:26] 2025-06-04 14:48:22,783 | INFO     | ..............................
[2025-06-04 16:54:26] 2025-06-04 14:48:22,783 | INFO     | . Timing measurements:
[2025-06-04 16:54:26] 2025-06-04 14:48:22,783 | INFO     | . get job = 0 s
[2025-06-04 16:54:26] 2025-06-04 14:48:22,783 | INFO     | . initial setup = 7 s
[2025-06-04 16:54:26] 2025-06-04 14:48:22,783 | INFO     | . payload setup = 158 s
[2025-06-04 16:54:26] 2025-06-04 14:48:22,783 | INFO     | . stage-in = 0 s
[2025-06-04 16:54:26] 2025-06-04 14:48:22,783 | INFO     | . payload execution = 13723 s
[2025-06-04 16:54:26] 2025-06-04 14:48:22,784 | INFO     | . stage-out = 4 s
[2025-06-04 16:54:26] 2025-06-04 14:48:22,784 | INFO     | . log creation = 0 s
[2025-06-04 16:54:26] 2025-06-04 14:48:22,784 | INFO     | ..............................
[2025-06-04 16:54:26] 2025-06-04 14:48:22,913 | INFO     | 
[2025-06-04 16:54:26] 2025-06-04 14:48:22,913 | INFO     | job summary report
[2025-06-04 16:54:26] 2025-06-04 14:48:22,913 | INFO     | --------------------------------------------------
[2025-06-04 16:54:26] 2025-06-04 14:48:22,913 | INFO     | PanDA job id: 6678075700
[2025-06-04 16:54:26] 2025-06-04 14:48:22,913 | INFO     | task id: 45006595
[2025-06-04 16:54:26] 2025-06-04 14:48:22,914 | INFO     | errors: (none)
[2025-06-04 16:54:26] 2025-06-04 14:48:22,914 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 16:54:26] 2025-06-04 14:48:22,914 | INFO     | pilot state: finished 
[2025-06-04 16:54:26] 2025-06-04 14:48:22,914 | INFO     | transexitcode: 0
[2025-06-04 16:54:26] 2025-06-04 14:48:22,914 | INFO     | exeerrorcode: 0
[2025-06-04 16:54:26] 2025-06-04 14:48:22,914 | INFO     | exeerrordiag: 
[2025-06-04 16:54:26] 2025-06-04 14:48:22,914 | INFO     | exitcode: 0
[2025-06-04 16:54:26] 2025-06-04 14:48:22,914 | INFO     | exitmsg: OK
[2025-06-04 16:54:26] 2025-06-04 14:48:22,914 | INFO     | cpuconsumptiontime: 49037 s
[2025-06-04 16:54:26] 2025-06-04 14:48:22,914 | INFO     | nevents: 400
[2025-06-04 16:54:26] 2025-06-04 14:48:22,914 | INFO     | neventsw: 0
[2025-06-04 16:54:26] 2025-06-04 14:48:22,914 | INFO     | pid: 9251
[2025-06-04 16:54:26] 2025-06-04 14:48:22,915 | INFO     | pgrp: 9251
[2025-06-04 16:54:26] 2025-06-04 14:48:22,915 | INFO     | corecount: 8
[2025-06-04 16:54:26] 2025-06-04 14:48:22,915 | INFO     | event service: False
[2025-06-04 16:54:26] 2025-06-04 14:48:22,915 | INFO     | sizes: {0: 2405014, 1: 2405213, 12: 2405213, 23: 2405241, 34: 2405269, 44: 2405297, 55: 2405453, 66: 2405481, 76: 2405509, 87: 2405771, 98: 2405799, 13885: 2435674
[2025-06-04 16:54:26] 2025-06-04 14:48:22,915 | INFO     | --------------------------------------------------
[2025-06-04 16:54:26] 2025-06-04 14:48:22,915 | INFO     | 
[2025-06-04 16:54:26] 2025-06-04 14:48:22,915 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-06-04 16:54:26] 2025-06-04 14:48:23,564 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 16:54:26] 2025-06-04 14:48:23,565 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 16:54:26] 2025-06-04 14:48:23,565 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 16:54:26] 2025-06-04 14:48:23,565 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 16:54:26] 2025-06-04 14:48:23,565 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 16:54:26] 2025-06-04 14:48:23,565 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 16:54:26] 2025-06-04 14:48:23,565 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 16:54:26] 2025-06-04 14:48:23,565 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 16:54:26] 2025-06-04 14:48:23,565 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 16:54:26] 2025-06-04 14:48:23,566 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 16:54:26] 2025-06-04 14:48:23,566 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 16:54:26] 2025-06-04 14:48:23,566 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 16:54:26] 2025-06-04 14:48:23,566 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 16:54:26] 2025-06-04 14:48:23,566 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 16:54:26] 2025-06-04 14:48:23,566 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 16:54:26] 2025-06-04 14:48:23,566 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 16:54:26] 2025-06-04 14:48:23,566 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 16:54:26] 2025-06-04 14:48:23,566 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 16:54:26] 2025-06-04 14:48:23,566 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 16:54:26] 2025-06-04 14:48:23,567 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 16:54:26] 2025-06-04 14:48:23,567 | INFO     | job 6678075700 has completed (purged errors)
[2025-06-04 16:54:26] 2025-06-04 14:48:23,567 | INFO     | overall cleanup function is called
[2025-06-04 16:54:26] 2025-06-04 14:48:24,576 | INFO     | --- collectZombieJob: --- 10, [9251]
[2025-06-04 16:54:26] 2025-06-04 14:48:24,577 | INFO     | zombie collector waiting for pid 9251
[2025-06-04 16:54:26] 2025-06-04 14:48:24,577 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 16:54:26] 2025-06-04 14:48:24,577 | INFO     | collected zombie processes
[2025-06-04 16:54:26] 2025-06-04 14:48:24,577 | INFO     | will attempt to kill all subprocesses of pid=9251
[2025-06-04 16:54:26] 2025-06-04 14:48:24,712 | INFO     | process IDs to be killed: [9251] (in reverse order)
[2025-06-04 16:54:26] 2025-06-04 14:48:25,505 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 16:54:26] 2025-06-04 14:48:25,506 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 16:54:26] 2025-06-04 14:48:25,509 | INFO     | did not find any defunct processes belonging to 9251
[2025-06-04 16:54:26] 2025-06-04 14:48:25,513 | INFO     | did not find any defunct processes belonging to 9251
[2025-06-04 16:54:26] 2025-06-04 14:48:25,513 | INFO     | ready for new job
[2025-06-04 16:54:26] 2025-06-04 14:48:25,513 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 16:54:26] 2025-06-04 14:48:25,515 | INFO     | **************************************
[2025-06-04 16:54:26] 2025-06-04 14:48:25,515 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 16:54:26] 2025-06-04 14:48:25,515 | INFO     | **************************************
[2025-06-04 16:54:26] 2025-06-04 14:48:25,516 | INFO     | 
[2025-06-04 16:54:26] 2025-06-04 14:48:25,516 | INFO     | pilot is running in a VM
[2025-06-04 16:54:26] 2025-06-04 14:48:25,516 | INFO     | architecture information:
[2025-06-04 16:54:26] 2025-06-04 14:48:25,517 | INFO     | executing command: cat /etc/os-release
[2025-06-04 16:54:26] 2025-06-04 14:48:25,580 | INFO     | cat /etc/os-release:
[2025-06-04 16:54:26] NAME="CentOS Linux"
[2025-06-04 16:54:26] VERSION="7 (Core)"
[2025-06-04 16:54:26] ID="centos"
[2025-06-04 16:54:26] ID_LIKE="rhel fedora"
[2025-06-04 16:54:26] VERSION_ID="7"
[2025-06-04 16:54:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 16:54:26] ANSI_COLOR="0;31"
[2025-06-04 16:54:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 16:54:26] HOME_URL="https://www.centos.org/"
[2025-06-04 16:54:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 16:54:26] 
[2025-06-04 16:54:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 16:54:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 16:54:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 16:54:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 16:54:26] 
[2025-06-04 16:54:26] 2025-06-04 14:48:25,580 | INFO     | **************************************
[2025-06-04 16:54:26] 2025-06-04 14:48:26,084 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-06-04 16:54:26] 2025-06-04 14:48:26,368 | INFO     | sufficient remaining disk space (496551067648 B)
[2025-06-04 16:54:26] 2025-06-04 14:48:26,369 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 16:54:26] 2025-06-04 14:48:26,369 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 16:54:26] 2025-06-04 14:48:26,369 | INFO     | update_server=False
[2025-06-04 16:54:26] 2025-06-04 14:48:26,369 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 16:54:26] 2025-06-04 14:48:26,371 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 16:54:26] 2025-06-04 14:48:26,482 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:54:26] 2025-06-04 14:48:26,483 | INFO     | aborting loop
[2025-06-04 16:54:26] 2025-06-04 14:48:26,646 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 16:54:26] 2025-06-04 14:48:26,771 | INFO     | all payload control threads have been joined
[2025-06-04 16:54:26] 2025-06-04 14:48:27,081 | INFO     | all data control threads have been joined
[2025-06-04 16:54:26] 2025-06-04 14:48:27,240 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 16:54:26] 2025-06-04 14:48:27,241 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 16:54:26] 2025-06-04 14:48:27,241 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 16:54:26] 2025-06-04 14:48:27,377 | INFO     | [job] retrieve thread has finished
[2025-06-04 16:54:26] 2025-06-04 14:48:27,489 | INFO     | [job] job monitor thread has finished
[2025-06-04 16:54:26] 2025-06-04 14:48:27,671 | INFO     | all job control threads have been joined
[2025-06-04 16:54:26] 2025-06-04 14:48:27,698 | INFO     | [payload] failed_post thread has finished
[2025-06-04 16:54:26] 2025-06-04 14:48:27,712 | INFO     | [payload] validate_post thread has finished
[2025-06-04 16:54:26] 2025-06-04 14:48:27,741 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 16:54:26] 2025-06-04 14:48:27,777 | INFO     | [payload] control thread has finished
[2025-06-04 16:54:26] 2025-06-04 14:48:27,869 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 16:54:26] 2025-06-04 14:48:27,929 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:54:26] 2025-06-04 14:48:28,087 | INFO     | [data] control thread has finished
[2025-06-04 16:54:26] 2025-06-04 14:48:28,146 | INFO     | [data] copytool_in thread has finished
[2025-06-04 16:54:26] 2025-06-04 14:48:28,507 | INFO     | [job] validate thread has finished
[2025-06-04 16:54:26] 2025-06-04 14:48:28,653 | INFO     | [data] copytool_out thread has finished
[2025-06-04 16:54:26] 2025-06-04 14:48:28,677 | INFO     | [job] control thread has finished
[2025-06-04 16:54:26] 2025-06-04 14:48:28,731 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 16:54:26] 2025-06-04 14:48:28,807 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 16:54:26] 2025-06-04 14:48:28,934 | INFO     | [job] queue monitor thread has finished
[2025-06-04 16:54:26] 2025-06-04 14:48:30,380 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 16:54:26] 2025-06-04 14:48:31,286 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140525206554432)>', '<ExcThread(monitor, started 140524526749440)>']
[2025-06-04 16:54:26] 2025-06-04 14:48:32,270 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 16:54:26] 2025-06-04 14:48:32,271 | INFO     | [monitor] control thread has ended
[2025-06-04 16:54:26] 2025-06-04 14:48:36,312 | INFO     | all workflow threads have been joined
[2025-06-04 16:54:26] 2025-06-04 14:48:36,313 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 16:54:26] 2025-06-04 14:48:36,313 | INFO     | traces error code: 0
[2025-06-04 16:54:26] 2025-06-04 14:48:36,313 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 16:54:26] 2025-06-04 14:48:36,623 [wrapper] ==== pilot stdout END ====
[2025-06-04 16:54:26] 2025-06-04 14:48:36,724 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 16:54:26] 2025-06-04 14:48:36,828 [wrapper] pilotpid: 2579
[2025-06-04 16:54:26] 2025-06-04 14:48:36,940 [wrapper] Pilot exit status: 0
[2025-06-04 16:54:26] 2025-06-04 14:48:37,397 [wrapper] pandaids: 6678075700
[2025-06-04 16:54:26] 2025-06-04 14:48:38,077 [wrapper] cleanup supervisor_pilot 20057 2580
[2025-06-04 16:54:26] 2025-06-04 14:48:38,169 [wrapper] Test setup, not cleaning
[2025-06-04 16:54:26] 2025-06-04 14:48:38,219 [wrapper] apfmon messages muted
[2025-06-04 16:54:26] 2025-06-04 14:48:38,277 [wrapper] ==== wrapper stdout END ====
[2025-06-04 16:54:26] 2025-06-04 14:48:38,327 [wrapper] ==== wrapper stderr END ====
[2025-06-04 16:54:26]  *** Error codes and diagnostics ***
[2025-06-04 16:54:26]     "exeErrorCode": 0,
[2025-06-04 16:54:26]     "exeErrorDiag": "",
[2025-06-04 16:54:26]     "pilotErrorCode": 0,
[2025-06-04 16:54:26]     "pilotErrorDiag": "",
[2025-06-04 16:54:26]  *** Listing of results directory ***
[2025-06-04 16:54:26] total 384488
[2025-06-04 16:54:26] -rw-r--r--. 1 boinc boinc    495897 Jun  3 23:41 pilot3.tar.gz
[2025-06-04 16:54:26] -rwx------. 1 boinc boinc     37140 Jun  3 23:44 runpilot2-wrapper.sh
[2025-06-04 16:54:26] -rw-r--r--. 1 boinc boinc      5111 Jun  3 23:44 queuedata.json
[2025-06-04 16:54:26] -rw-r--r--. 1 boinc boinc       100 Jun  4 12:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 16:54:26] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 12:49 run_atlas
[2025-06-04 16:54:26] -rw-r--r--. 1 boinc boinc       105 Jun  4 12:49 job.xml
[2025-06-04 16:54:26] -rw-r--r--. 1 boinc boinc      6391 Jun  4 12:49 init_data.xml
[2025-06-04 16:54:26] -rw-r--r--. 2 boinc boinc 213290507 Jun  4 12:49 EVNT.45006593._001857.pool.root.1
[2025-06-04 16:54:26] -rw-r--r--. 2 boinc boinc     15093 Jun  4 12:49 start_atlas.sh
[2025-06-04 16:54:26] drwxrwx--x. 2 boinc boinc        68 Jun  4 12:49 shared
[2025-06-04 16:54:26] -rw-r--r--. 2 boinc boinc    508876 Jun  4 12:49 input.tar.gz
[2025-06-04 16:54:26] -rw-r--r--. 1 boinc boinc         0 Jun  4 12:49 boinc_lockfile
[2025-06-04 16:54:26] -rw-r--r--. 1 boinc boinc      2525 Jun  4 12:49 pandaJob.out
[2025-06-04 16:54:26] -rw-------. 1 boinc boinc    986812 Jun  4 12:52 agis_schedconf.cvmfs.json
[2025-06-04 16:54:26] drwx------. 4 boinc boinc      4096 Jun  4 12:52 pilot3
[2025-06-04 16:54:26] -rw-------. 1 boinc boinc 173409008 Jun  4 16:45 HITS.45006595._046307.pool.root.1
[2025-06-04 16:54:26] -rw-r--r--. 1 boinc boinc       531 Jun  4 16:45 boinc_task_state.xml
[2025-06-04 16:54:26] -rw-------. 1 boinc boinc      1014 Jun  4 16:46 memory_monitor_summary.json
[2025-06-04 16:54:26] -rw-------. 1 boinc boinc   1598969 Jun  4 16:46 agis_ddmendpoints.agis.ALL.json
[2025-06-04 16:54:26] -rw-------. 1 boinc boinc    395172 Jun  4 16:47 log.45006595._046307.job.log.tgz.1
[2025-06-04 16:54:26] -rw-------. 1 boinc boinc        95 Jun  4 16:47 pilot_heartbeat.json
[2025-06-04 16:54:26] -rw-------. 1 boinc boinc      7688 Jun  4 16:48 heartbeat.json
[2025-06-04 16:54:26] -rw-------. 1 boinc boinc      4417 Jun  4 16:48 pilotlog.txt
[2025-06-04 16:54:26] -rw-------. 1 boinc boinc   1206381 Jun  4 16:48 log.45006595._046307.job.log.1
[2025-06-04 16:54:26] -rw-------. 1 boinc boinc       357 Jun  4 16:48 output.list
[2025-06-04 16:54:26] -rw-r--r--. 1 boinc boinc       620 Jun  4 16:48 runtime_log
[2025-06-04 16:54:26] -rw-------. 1 boinc boinc   1617920 Jun  4 16:48 result.tar.gz
[2025-06-04 16:54:26] -rw-r--r--. 1 boinc boinc      8673 Jun  4 16:48 runtime_log.err
[2025-06-04 16:54:26] -rw-------. 1 boinc boinc       656 Jun  4 16:48 QERODmIcog7n9Rq4apOajLDm4fhM0noT9bVof3QYDmC0ZKDmlNrWmn.diag
[2025-06-04 16:54:26] -rw-r--r--. 1 boinc boinc      8192 Jun  4 16:54 boinc_mmap_file
[2025-06-04 16:54:26] -rw-r--r--. 1 boinc boinc        28 Jun  4 16:54 wrapper_checkpoint.txt
[2025-06-04 16:54:26] -rw-r--r--. 1 boinc boinc     20506 Jun  4 16:54 stderr.txt
[2025-06-04 16:54:27] HITS file was successfully produced:
[2025-06-04 16:54:27] -rw-------. 1 boinc boinc 173409008 Jun  4 16:45 shared/HITS.pool.root.1
[2025-06-04 16:54:27]  *** Contents of shared directory: ***
[2025-06-04 16:54:27] total 379736
[2025-06-04 16:54:27] -rw-r--r--. 2 boinc boinc 213290507 Jun  4 12:49 ATLAS.root_0
[2025-06-04 16:54:27] -rw-r--r--. 2 boinc boinc     15093 Jun  4 12:49 start_atlas.sh
[2025-06-04 16:54:27] -rw-r--r--. 2 boinc boinc    508876 Jun  4 12:49 input.tar.gz
[2025-06-04 16:54:27] -rw-------. 1 boinc boinc 173409008 Jun  4 16:45 HITS.pool.root.1
[2025-06-04 16:54:27] -rw-------. 1 boinc boinc   1617920 Jun  4 16:48 result.tar.gz
16:54:28 (27384): run_atlas exited; CPU time 49229.856075
16:54:28 (27384): called boinc_finish(0)

</stderr_txt>
]]>

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