Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:05:57 (1290): wrapper (7.7.26015): starting
17:05:57 (1290): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 17:05:57] Arguments: --nthreads 8
[2025-06-04 17:05:57] Threads: 8
[2025-06-04 17:05:57] Checking for CVMFS
[2025-06-04 17:05:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 17:05:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 17:05:58] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 17:05:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 17:05:59] 2.11.2.0 8450 33378 94668 146783 0 200 16591879 25165824 4302 130560 0 17677404 99.771 20331653 2015 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 17:05:59] CVMFS is ok
[2025-06-04 17:05:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 17:05:59] Checking for apptainer binary...
[2025-06-04 17:05:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 17:05:59] Running /usr/bin/apptainer --version
[2025-06-04 17:05:59] apptainer version 1.3.2-1.el7
[2025-06-04 17:05:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 17:06:09] cg-vwn262.simple-grid.lan
[2025-06-04 17:06:09] apptainer works
[2025-06-04 17:06:09] Set ATHENA_PROC_NUMBER=8
[2025-06-04 17:06:09] Set ATHENA_CORE_NUMBER=8
[2025-06-04 17:06:09] Starting ATLAS job with PandaID=6678150199
[2025-06-04 17:06:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 21:42:43]  *** The last 200 lines of the pilot log: ***
[2025-06-04 21:42:43] 2025-06-04 19:14:08,541 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6678150199/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 21:42:43] 2025-06-04 19:14:08,542 | INFO     | extracted standard info from prmon json
[2025-06-04 21:42:43] 2025-06-04 19:14:08,543 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 21:42:43] 2025-06-04 19:14:08,543 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 21:42:43] 2025-06-04 19:14:08,543 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 21:42:43] 2025-06-04 19:14:08,543 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 21:42:43] 2025-06-04 19:14:08,548 | INFO     | fitting pss+swap vs Time
[2025-06-04 21:42:43] 2025-06-04 19:14:08,549 | INFO     | sum of square deviations: 3871990738.0
[2025-06-04 21:42:43] 2025-06-04 19:14:08,551 | INFO     | sum of deviations: 72739503375.00002
[2025-06-04 21:42:43] 2025-06-04 19:14:08,551 | INFO     | mean x: 1749057287.5
[2025-06-04 21:42:43] 2025-06-04 19:14:08,551 | INFO     | mean y: 2431525.077586207
[2025-06-04 21:42:43] 2025-06-04 19:14:08,551 | INFO     | -- intersect: -32855487585.775055
[2025-06-04 21:42:43] 2025-06-04 19:14:08,551 | INFO     | intersect: -32855487585.775055
[2025-06-04 21:42:43] 2025-06-04 19:14:08,552 | INFO     | chi2: 5.613156272355672
[2025-06-04 21:42:43] 2025-06-04 19:14:08,552 | INFO     | sum of square deviations: 3627000098.0
[2025-06-04 21:42:43] 2025-06-04 19:14:08,554 | INFO     | sum of deviations: 86320037624.00002
[2025-06-04 21:42:43] 2025-06-04 19:14:08,554 | INFO     | mean x: 1749057135.0
[2025-06-04 21:42:43] 2025-06-04 19:14:08,554 | INFO     | mean y: 2439812.1629955946
[2025-06-04 21:42:43] 2025-06-04 19:14:08,554 | INFO     | -- intersect: -41623883215.22769
[2025-06-04 21:42:43] 2025-06-04 19:14:08,555 | INFO     | intersect: -41623883215.22769
[2025-06-04 21:42:43] 2025-06-04 19:14:08,555 | INFO     | chi2: 4.8807938213230075
[2025-06-04 21:42:43] 2025-06-04 19:14:08,555 | INFO     | current chi2=4.8807938213230075 (change=13.047248562087766 %)
[2025-06-04 21:42:43] 2025-06-04 19:14:08,555 | INFO     | right removable region: 226
[2025-06-04 21:42:43] 2025-06-04 19:14:08,556 | INFO     | sum of square deviations: 3627000098.0
[2025-06-04 21:42:43] 2025-06-04 19:14:08,558 | INFO     | sum of deviations: -3176172765.999996
[2025-06-04 21:42:43] 2025-06-04 19:14:08,558 | INFO     | mean x: 1749057440.0
[2025-06-04 21:42:43] 2025-06-04 19:14:08,558 | INFO     | mean y: 2478705.5506607927
[2025-06-04 21:42:43] 2025-06-04 19:14:08,558 | INFO     | -- intersect: 1534132539.847765
[2025-06-04 21:42:43] 2025-06-04 19:14:08,558 | INFO     | intersect: 1534132539.847765
[2025-06-04 21:42:43] 2025-06-04 19:14:08,559 | INFO     | chi2: 1.3388084659339377
[2025-06-04 21:42:43] 2025-06-04 19:14:08,559 | INFO     | current chi2=1.3388084659339377 (change=76.14874054856698 %)
[2025-06-04 21:42:43] 2025-06-04 19:14:08,559 | INFO     | sum of square deviations: 3392567795.5
[2025-06-04 21:42:43] 2025-06-04 19:14:08,561 | INFO     | sum of deviations: -25417688894.5
[2025-06-04 21:42:43] 2025-06-04 19:14:08,561 | INFO     | mean x: 1749057592.5
[2025-06-04 21:42:43] 2025-06-04 19:14:08,561 | INFO     | mean y: 2493049.1126126125
[2025-06-04 21:42:43] 2025-06-04 19:14:08,561 | INFO     | -- intersect: 13106726899.265057
[2025-06-04 21:42:43] 2025-06-04 19:14:08,561 | INFO     | intersect: 13106726899.265057
[2025-06-04 21:42:43] 2025-06-04 19:14:08,562 | INFO     | chi2: 0.8106769432698755
[2025-06-04 21:42:43] 2025-06-04 19:14:08,562 | INFO     | current chi2=0.8106769432698755 (change=39.44787742999844 %)
[2025-06-04 21:42:43] 2025-06-04 19:14:08,562 | INFO     | sum of square deviations: 3168461268.0
[2025-06-04 21:42:43] 2025-06-04 19:14:08,564 | INFO     | sum of deviations: -25377969995.0
[2025-06-04 21:42:43] 2025-06-04 19:14:08,564 | INFO     | mean x: 1749057745.0
[2025-06-04 21:42:43] 2025-06-04 19:14:08,564 | INFO     | mean y: 2493018.6267281105
[2025-06-04 21:42:43] 2025-06-04 19:14:08,564 | INFO     | -- intersect: 14011670097.868954
[2025-06-04 21:42:43] 2025-06-04 19:14:08,564 | INFO     | intersect: 14011670097.868954
[2025-06-04 21:42:43] 2025-06-04 19:14:08,565 | INFO     | chi2: 0.810000045658246
[2025-06-04 21:42:43] 2025-06-04 19:14:08,565 | INFO     | current chi2=0.810000045658246 (change=0.08349782453404977 %)
[2025-06-04 21:42:43] 2025-06-04 19:14:08,565 | INFO     | left removable region: 30
[2025-06-04 21:42:43] 2025-06-04 19:14:08,565 | INFO     | sum of square deviations: 2334722845.0
[2025-06-04 21:42:43] 2025-06-04 19:14:08,567 | INFO     | sum of deviations: -6472553565.499998
[2025-06-04 21:42:43] 2025-06-04 19:14:08,567 | INFO     | mean x: 1749058019.5
[2025-06-04 21:42:43] 2025-06-04 19:14:08,567 | INFO     | mean y: 2500086.7704081633
[2025-06-04 21:42:43] 2025-06-04 19:14:08,568 | INFO     | -- intersect: 4851414699.751415
[2025-06-04 21:42:43] 2025-06-04 19:14:08,568 | INFO     | intersect: 4851414699.751415
[2025-06-04 21:42:43] 2025-06-04 19:14:08,568 | INFO     | chi2: 0.014840765911315142
[2025-06-04 21:42:43] 2025-06-04 19:14:08,568 | INFO     | -- intersect: 4851414699.751415
[2025-06-04 21:42:43] 2025-06-04 19:14:08,568 | INFO     | current memory leak: -2.77 B/s (using 196 data points, chi2=0.01)
[2025-06-04 21:42:43] 2025-06-04 19:14:08,569 | INFO     | ..............................
[2025-06-04 21:42:43] 2025-06-04 19:14:08,569 | INFO     | . Timing measurements:
[2025-06-04 21:42:43] 2025-06-04 19:14:08,569 | INFO     | . get job = 0 s
[2025-06-04 21:42:43] 2025-06-04 19:14:08,569 | INFO     | . initial setup = 10 s
[2025-06-04 21:42:43] 2025-06-04 19:14:08,569 | INFO     | . payload setup = 150 s
[2025-06-04 21:42:43] 2025-06-04 19:14:08,570 | INFO     | . stage-in = 0 s
[2025-06-04 21:42:43] 2025-06-04 19:14:08,570 | INFO     | . payload execution = 14263 s
[2025-06-04 21:42:43] 2025-06-04 19:14:08,570 | INFO     | . stage-out = 3 s
[2025-06-04 21:42:43] 2025-06-04 19:14:08,570 | INFO     | . log creation = 1 s
[2025-06-04 21:42:43] 2025-06-04 19:14:08,570 | INFO     | ..............................
[2025-06-04 21:42:43] 2025-06-04 19:14:08,732 | INFO     | 
[2025-06-04 21:42:43] 2025-06-04 19:14:08,732 | INFO     | job summary report
[2025-06-04 21:42:43] 2025-06-04 19:14:08,732 | INFO     | --------------------------------------------------
[2025-06-04 21:42:43] 2025-06-04 19:14:08,732 | INFO     | PanDA job id: 6678150199
[2025-06-04 21:42:43] 2025-06-04 19:14:08,732 | INFO     | task id: 45006595
[2025-06-04 21:42:43] 2025-06-04 19:14:08,732 | INFO     | errors: (none)
[2025-06-04 21:42:43] 2025-06-04 19:14:08,732 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 21:42:43] 2025-06-04 19:14:08,733 | INFO     | pilot state: finished 
[2025-06-04 21:42:43] 2025-06-04 19:14:08,733 | INFO     | transexitcode: 0
[2025-06-04 21:42:43] 2025-06-04 19:14:08,733 | INFO     | exeerrorcode: 0
[2025-06-04 21:42:43] 2025-06-04 19:14:08,733 | INFO     | exeerrordiag: 
[2025-06-04 21:42:43] 2025-06-04 19:14:08,733 | INFO     | exitcode: 0
[2025-06-04 21:42:43] 2025-06-04 19:14:08,733 | INFO     | exitmsg: OK
[2025-06-04 21:42:43] 2025-06-04 19:14:08,733 | INFO     | cpuconsumptiontime: 52465 s
[2025-06-04 21:42:43] 2025-06-04 19:14:08,733 | INFO     | nevents: 400
[2025-06-04 21:42:43] 2025-06-04 19:14:08,733 | INFO     | neventsw: 0
[2025-06-04 21:42:43] 2025-06-04 19:14:08,733 | INFO     | pid: 12842
[2025-06-04 21:42:43] 2025-06-04 19:14:08,733 | INFO     | pgrp: 12842
[2025-06-04 21:42:43] 2025-06-04 19:14:08,734 | INFO     | corecount: 8
[2025-06-04 21:42:43] 2025-06-04 19:14:08,734 | INFO     | event service: False
[2025-06-04 21:42:43] 2025-06-04 19:14:08,734 | INFO     | sizes: {0: 2396514, 1: 2397200, 2: 2397399, 13: 2397399, 23: 2397455, 34: 2397483, 45: 2397639, 56: 2397667, 66: 2397695, 77: 2397723, 86: 2397985, 88: 2398293, 14
[2025-06-04 21:42:43] 2025-06-04 19:14:08,734 | INFO     | --------------------------------------------------
[2025-06-04 21:42:43] 2025-06-04 19:14:08,734 | INFO     | 
[2025-06-04 21:42:43] 2025-06-04 19:14:08,734 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-04 21:42:43] 2025-06-04 19:14:09,069 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 21:42:43] 2025-06-04 19:14:09,070 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 21:42:43] 2025-06-04 19:14:09,070 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 21:42:43] 2025-06-04 19:14:09,070 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 21:42:43] 2025-06-04 19:14:09,070 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 21:42:43] 2025-06-04 19:14:09,070 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 21:42:43] 2025-06-04 19:14:09,070 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 21:42:43] 2025-06-04 19:14:09,070 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 21:42:43] 2025-06-04 19:14:09,070 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 21:42:43] 2025-06-04 19:14:09,070 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 21:42:43] 2025-06-04 19:14:09,071 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 21:42:43] 2025-06-04 19:14:09,071 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 21:42:43] 2025-06-04 19:14:09,071 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 21:42:43] 2025-06-04 19:14:09,071 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 21:42:43] 2025-06-04 19:14:09,071 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 21:42:43] 2025-06-04 19:14:09,071 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 21:42:43] 2025-06-04 19:14:09,071 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 21:42:43] 2025-06-04 19:14:09,071 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 21:42:43] 2025-06-04 19:14:09,071 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 21:42:43] 2025-06-04 19:14:09,071 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 21:42:43] 2025-06-04 19:14:09,072 | INFO     | job 6678150199 has completed (purged errors)
[2025-06-04 21:42:43] 2025-06-04 19:14:09,072 | INFO     | overall cleanup function is called
[2025-06-04 21:42:43] 2025-06-04 19:14:10,081 | INFO     | --- collectZombieJob: --- 10, [12842]
[2025-06-04 21:42:43] 2025-06-04 19:14:10,081 | INFO     | zombie collector waiting for pid 12842
[2025-06-04 21:42:43] 2025-06-04 19:14:10,081 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 21:42:43] 2025-06-04 19:14:10,081 | INFO     | collected zombie processes
[2025-06-04 21:42:43] 2025-06-04 19:14:10,081 | INFO     | will attempt to kill all subprocesses of pid=12842
[2025-06-04 21:42:43] 2025-06-04 19:14:10,203 | INFO     | process IDs to be killed: [12842] (in reverse order)
[2025-06-04 21:42:43] 2025-06-04 19:14:10,305 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 21:42:43] 2025-06-04 19:14:10,306 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 21:42:43] 2025-06-04 19:14:10,309 | INFO     | did not find any defunct processes belonging to 12842
[2025-06-04 21:42:43] 2025-06-04 19:14:10,312 | INFO     | did not find any defunct processes belonging to 12842
[2025-06-04 21:42:43] 2025-06-04 19:14:10,313 | INFO     | ready for new job
[2025-06-04 21:42:43] 2025-06-04 19:14:10,313 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 21:42:43] 2025-06-04 19:14:10,315 | INFO     | **************************************
[2025-06-04 21:42:43] 2025-06-04 19:14:10,315 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 21:42:43] 2025-06-04 19:14:10,316 | INFO     | **************************************
[2025-06-04 21:42:43] 2025-06-04 19:14:10,316 | INFO     | 
[2025-06-04 21:42:43] 2025-06-04 19:14:10,316 | INFO     | pilot is running in a VM
[2025-06-04 21:42:43] 2025-06-04 19:14:10,316 | INFO     | architecture information:
[2025-06-04 21:42:43] 2025-06-04 19:14:10,324 | INFO     | executing command: cat /etc/os-release
[2025-06-04 21:42:43] 2025-06-04 19:14:10,549 | INFO     | cat /etc/os-release:
[2025-06-04 21:42:43] NAME="CentOS Linux"
[2025-06-04 21:42:43] VERSION="7 (Core)"
[2025-06-04 21:42:43] ID="centos"
[2025-06-04 21:42:43] ID_LIKE="rhel fedora"
[2025-06-04 21:42:43] VERSION_ID="7"
[2025-06-04 21:42:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 21:42:43] ANSI_COLOR="0;31"
[2025-06-04 21:42:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 21:42:43] HOME_URL="https://www.centos.org/"
[2025-06-04 21:42:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 21:42:43] 
[2025-06-04 21:42:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 21:42:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 21:42:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 21:42:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 21:42:43] 
[2025-06-04 21:42:43] 2025-06-04 19:14:10,550 | INFO     | **************************************
[2025-06-04 21:42:43] 2025-06-04 19:14:11,053 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-04 21:42:43] 2025-06-04 19:14:11,378 | INFO     | sufficient remaining disk space (496850960384 B)
[2025-06-04 21:42:43] 2025-06-04 19:14:11,379 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 21:42:43] 2025-06-04 19:14:11,379 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 21:42:43] 2025-06-04 19:14:11,379 | INFO     | update_server=False
[2025-06-04 21:42:43] 2025-06-04 19:14:11,379 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 21:42:43] 2025-06-04 19:14:11,387 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:42:43] 2025-06-04 19:14:11,387 | INFO     | aborting loop
[2025-06-04 21:42:43] 2025-06-04 19:14:11,428 | INFO     | all payload control threads have been joined
[2025-06-04 21:42:43] 2025-06-04 19:14:11,460 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 21:42:43] 2025-06-04 19:14:11,460 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 21:42:43] 2025-06-04 19:14:11,460 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 21:42:43] 2025-06-04 19:14:11,647 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 21:42:43] 2025-06-04 19:14:12,127 | INFO     | all job control threads have been joined
[2025-06-04 21:42:43] 2025-06-04 19:14:12,177 | INFO     | all data control threads have been joined
[2025-06-04 21:42:43] 2025-06-04 19:14:12,385 | INFO     | [job] retrieve thread has finished
[2025-06-04 21:42:43] 2025-06-04 19:14:12,393 | INFO     | [job] job monitor thread has finished
[2025-06-04 21:42:43] 2025-06-04 19:14:12,434 | INFO     | [payload] control thread has finished
[2025-06-04 21:42:43] 2025-06-04 19:14:12,685 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 21:42:43] 2025-06-04 19:14:12,694 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 21:42:43] 2025-06-04 19:14:12,869 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 21:42:43] 2025-06-04 19:14:12,927 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 21:42:43] 2025-06-04 19:14:12,928 | INFO     | [payload] validate_post thread has finished
[2025-06-04 21:42:43] 2025-06-04 19:14:13,006 | INFO     | [data] copytool_in thread has finished
[2025-06-04 21:42:43] 2025-06-04 19:14:13,133 | INFO     | [job] control thread has finished
[2025-06-04 21:42:43] 2025-06-04 19:14:13,182 | INFO     | [data] control thread has finished
[2025-06-04 21:42:43] 2025-06-04 19:14:13,396 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 21:42:43] 2025-06-04 19:14:13,554 | INFO     | [job] validate thread has finished
[2025-06-04 21:42:43] 2025-06-04 19:14:13,654 | INFO     | [data] copytool_out thread has finished
[2025-06-04 21:42:43] 2025-06-04 19:14:13,747 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:42:43] 2025-06-04 19:14:13,969 | INFO     | [payload] failed_post thread has finished
[2025-06-04 21:42:43] 2025-06-04 19:14:14,753 | INFO     | [job] queue monitor thread has finished
[2025-06-04 21:42:43] 2025-06-04 19:14:16,703 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 21:42:43] 2025-06-04 19:14:17,676 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140005460272960)>', '<ExcThread(monitor, started 140004718274304)>']
[2025-06-04 21:42:43] 2025-06-04 19:14:18,502 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 21:42:43] 2025-06-04 19:14:18,502 | INFO     | [monitor] control thread has ended
[2025-06-04 21:42:43] 2025-06-04 19:14:22,702 | INFO     | all workflow threads have been joined
[2025-06-04 21:42:43] 2025-06-04 19:14:22,702 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 21:42:43] 2025-06-04 19:14:22,702 | INFO     | traces error code: 0
[2025-06-04 21:42:43] 2025-06-04 19:14:22,703 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 21:42:43] 2025-06-04 19:14:23,099 [wrapper] ==== pilot stdout END ====
[2025-06-04 21:42:43] 2025-06-04 19:14:23,218 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 21:42:43] 2025-06-04 19:14:23,340 [wrapper] pilotpid: 6216
[2025-06-04 21:42:43] 2025-06-04 19:14:23,396 [wrapper] Pilot exit status: 0
[2025-06-04 21:42:43] 2025-06-04 19:14:23,801 [wrapper] pandaids: 6678150199
[2025-06-04 21:42:43] 2025-06-04 19:14:24,600 [wrapper] cleanup supervisor_pilot  4566 6217
[2025-06-04 21:42:43] 2025-06-04 19:14:24,683 [wrapper] Test setup, not cleaning
[2025-06-04 21:42:43] 2025-06-04 19:14:24,802 [wrapper] apfmon messages muted
[2025-06-04 21:42:43] 2025-06-04 19:14:24,929 [wrapper] ==== wrapper stdout END ====
[2025-06-04 21:42:43] 2025-06-04 19:14:25,038 [wrapper] ==== wrapper stderr END ====
[2025-06-04 21:42:43]  *** Error codes and diagnostics ***
[2025-06-04 21:42:43]     "exeErrorCode": 0,
[2025-06-04 21:42:43]     "exeErrorDiag": "",
[2025-06-04 21:42:43]     "pilotErrorCode": 0,
[2025-06-04 21:42:43]     "pilotErrorDiag": "",
[2025-06-04 21:42:43]  *** Listing of results directory ***
[2025-06-04 21:42:43] total 401152
[2025-06-04 21:42:43] -rw-r--r--. 1 boinc boinc    495897 Jun  3 23:57 pilot3.tar.gz
[2025-06-04 21:42:43] -rw-r--r--. 1 boinc boinc      5111 Jun  4 00:00 queuedata.json
[2025-06-04 21:42:43] -rwx------. 1 boinc boinc     37140 Jun  4 00:00 runpilot2-wrapper.sh
[2025-06-04 21:42:43] -rw-r--r--. 1 boinc boinc       100 Jun  4 17:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 21:42:43] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 17:05 run_atlas
[2025-06-04 21:42:43] -rw-r--r--. 1 boinc boinc       105 Jun  4 17:05 job.xml
[2025-06-04 21:42:43] -rw-r--r--. 2 boinc boinc 215077866 Jun  4 17:05 EVNT.45006593._001872.pool.root.1
[2025-06-04 21:42:43] -rw-r--r--. 2 boinc boinc     15093 Jun  4 17:05 start_atlas.sh
[2025-06-04 21:42:43] drwxrwx--x. 2 boinc boinc        68 Jun  4 17:05 shared
[2025-06-04 21:42:43] -rw-r--r--. 2 boinc boinc    508879 Jun  4 17:05 input.tar.gz
[2025-06-04 21:42:43] -rw-r--r--. 1 boinc boinc      6392 Jun  4 17:05 init_data.xml
[2025-06-04 21:42:43] -rw-r--r--. 1 boinc boinc         0 Jun  4 17:05 boinc_lockfile
[2025-06-04 21:42:43] -rw-r--r--. 1 boinc boinc      2525 Jun  4 17:06 pandaJob.out
[2025-06-04 21:42:43] -rw-------. 1 boinc boinc    987207 Jun  4 17:09 agis_schedconf.cvmfs.json
[2025-06-04 21:42:43] drwx------. 4 boinc boinc      4096 Jun  4 17:09 pilot3
[2025-06-04 21:42:43] -rw-------. 1 boinc boinc 188594241 Jun  4 21:11 HITS.45006595._046698.pool.root.1
[2025-06-04 21:42:43] -rw-r--r--. 1 boinc boinc       530 Jun  4 21:11 boinc_task_state.xml
[2025-06-04 21:42:43] -rw-------. 1 boinc boinc      1020 Jun  4 21:12 memory_monitor_summary.json
[2025-06-04 21:42:43] -rw-------. 1 boinc boinc   1598969 Jun  4 21:12 agis_ddmendpoints.agis.ALL.json
[2025-06-04 21:42:43] -rw-------. 1 boinc boinc    391061 Jun  4 21:12 log.45006595._046698.job.log.tgz.1
[2025-06-04 21:42:43] -rw-------. 1 boinc boinc        95 Jun  4 21:13 pilot_heartbeat.json
[2025-06-04 21:42:43] -rw-------. 1 boinc boinc      7695 Jun  4 21:14 heartbeat.json
[2025-06-04 21:42:43] -rw-------. 1 boinc boinc      4417 Jun  4 21:14 pilotlog.txt
[2025-06-04 21:42:43] -rw-------. 1 boinc boinc   1249491 Jun  4 21:14 log.45006595._046698.job.log.1
[2025-06-04 21:42:43] -rw-------. 1 boinc boinc       357 Jun  4 21:14 output.list
[2025-06-04 21:42:43] -rw-r--r--. 1 boinc boinc       620 Jun  4 21:14 runtime_log
[2025-06-04 21:42:43] -rw-------. 1 boinc boinc   1658880 Jun  4 21:14 result.tar.gz
[2025-06-04 21:42:43] -rw-r--r--. 1 boinc boinc      8673 Jun  4 21:14 runtime_log.err
[2025-06-04 21:42:43] -rw-------. 1 boinc boinc       657 Jun  4 21:14 EiPMDmVrog7n9Rq4apOajLDm4fhM0noT9bVof3QYDmZ6ZKDmD1ZeMm.diag
[2025-06-04 21:42:43] -rw-r--r--. 1 boinc boinc      8192 Jun  4 21:42 boinc_mmap_file
[2025-06-04 21:42:43] -rw-r--r--. 1 boinc boinc        28 Jun  4 21:42 wrapper_checkpoint.txt
[2025-06-04 21:42:43] -rw-r--r--. 1 boinc boinc     20534 Jun  4 21:42 stderr.txt
[2025-06-04 21:42:43] HITS file was successfully produced:
[2025-06-04 21:42:43] -rw-------. 1 boinc boinc 188594241 Jun  4 21:11 shared/HITS.pool.root.1
[2025-06-04 21:42:43]  *** Contents of shared directory: ***
[2025-06-04 21:42:43] total 396352
[2025-06-04 21:42:43] -rw-r--r--. 2 boinc boinc 215077866 Jun  4 17:05 ATLAS.root_0
[2025-06-04 21:42:43] -rw-r--r--. 2 boinc boinc     15093 Jun  4 17:05 start_atlas.sh
[2025-06-04 21:42:43] -rw-r--r--. 2 boinc boinc    508879 Jun  4 17:05 input.tar.gz
[2025-06-04 21:42:43] -rw-------. 1 boinc boinc 188594241 Jun  4 21:11 HITS.pool.root.1
[2025-06-04 21:42:43] -rw-------. 1 boinc boinc   1658880 Jun  4 21:14 result.tar.gz
21:42:45 (1290): run_atlas exited; CPU time 52662.291035
21:42:45 (1290): called boinc_finish(0)

</stderr_txt>
]]>

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