Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:08:30 (1470154): wrapper (7.7.26015): starting
23:08:30 (1470154): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 23:08:30] Arguments: --nthreads 12
[2025-06-03 23:08:30] Threads: 12
[2025-06-03 23:08:30] Checking for CVMFS
[2025-06-03 23:08:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 23:08:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 23:08:30] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 23:08:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 23:08:30] 2.12.6.0 5533 30945 473544 146765 0 511 22260860 32935936 3757 16776704 1 128183137 99.630 117488442 31762 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 23:08:30] CVMFS is ok
[2025-06-03 23:08:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 23:08:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 23:08:30] Further information can be found at the LHC@home message board.
[2025-06-03 23:08:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 23:08:30] Checking for apptainer binary...
[2025-06-03 23:08:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 23:08:30] Running /usr/bin/apptainer --version
[2025-06-03 23:08:30] apptainer version 1.4.1-1.el9
[2025-06-03 23:08:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 23:08:31] c6-2-29-3.aglt2.org
[2025-06-03 23:08:31] apptainer works
[2025-06-03 23:08:31] Set ATHENA_PROC_NUMBER=12
[2025-06-03 23:08:31] Set ATHENA_CORE_NUMBER=12
[2025-06-03 23:08:31] Starting ATLAS job with PandaID=6678074794
[2025-06-03 23:08:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 23:47:01]  *** The last 200 lines of the pilot log: ***
[2025-06-03 23:47:01]  guid=1321d404-983f-4691-82a2-f66118cc4985
[2025-06-03 23:47:01]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 23:47:01]  is_altstaged=None
[2025-06-03 23:47:01]  is_tar=False
[2025-06-03 23:47:01]  lfn=log.45006595._046081.job.log.tgz.1
[2025-06-03 23:47:01]  mtime=0
[2025-06-03 23:47:01]  protocol_id=None
[2025-06-03 23:47:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 23:47:01]  replicas=None
[2025-06-03 23:47:01]  scope=mc23_13p6TeV
[2025-06-03 23:47:01]  status=None
[2025-06-03 23:47:01]  status_code=0
[2025-06-03 23:47:01]  storage_token=
[2025-06-03 23:47:01]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678074794/log.45006595._046081.job.log.tgz.1
[2025-06-03 23:47:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/40/log.45006595._046081.job.log.tgz.1
[2025-06-03 23:47:01]  workdir=None
[2025-06-03 23:47:01] ]
[2025-06-03 23:47:01] 2025-06-04 03:46:40,424 | INFO     | transferring file log.45006595._046081.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678074794/log.45006595._046081.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 23:47:01] 2025-06-04 03:46:40,424 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678074794/log.45006595._046081.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._046081.job
[2025-06-03 23:47:01] 2025-06-04 03:46:40,445 | INFO     | adding to output.list: log.45006595._046081.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/40/log.45006595._046081.job.log.tg
[2025-06-03 23:47:01] 2025-06-04 03:46:40,446 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 23:47:01] 2025-06-04 03:46:40,446 | INFO     | summary of transferred files:
[2025-06-03 23:47:01] 2025-06-04 03:46:40,446 | INFO     |  -- lfn=log.45006595._046081.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 23:47:01] 2025-06-04 03:46:40,446 | INFO     | stage-out finished correctly
[2025-06-03 23:47:01] 2025-06-04 03:46:40,493 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 23:47:01] 2025-06-04 03:46:40,996 | INFO     | monitor loop #177: job 0:6678074794 is in state 'finished'
[2025-06-03 23:47:01] 2025-06-04 03:46:40,997 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 23:47:01] 2025-06-04 03:46:41,358 | INFO     | job 6678074794 has state=finished
[2025-06-03 23:47:01] 2025-06-04 03:46:41,359 | INFO     | preparing for final server update for job 6678074794 in state='finished'
[2025-06-03 23:47:01] 2025-06-04 03:46:41,360 | INFO     | this job has now completed (state=finished)
[2025-06-03 23:47:01] 2025-06-04 03:46:41,360 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 23:47:01] 2025-06-04 03:46:41,360 | INFO     | log transfer has been attempted: DONE
[2025-06-03 23:47:01] 2025-06-04 03:46:41,360 | INFO     | job 6678074794 has finished - writing final server update
[2025-06-03 23:47:01] 2025-06-04 03:46:41,361 | INFO     | total number of processed events: 400 (read)
[2025-06-03 23:47:01] 2025-06-04 03:46:41,379 | INFO     | executing command: lscpu
[2025-06-03 23:47:01] 2025-06-04 03:46:41,459 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 23:47:01] 2025-06-04 03:46:43,500 | INFO     | monitor loop #178: job 0:6678074794 is in state 'finished'
[2025-06-03 23:47:01] 2025-06-04 03:46:43,501 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 23:47:01] 2025-06-04 03:46:46,004 | INFO     | monitor loop #179: job 0:6678074794 is in state 'finished'
[2025-06-03 23:47:01] 2025-06-04 03:46:46,004 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 23:47:01] 2025-06-04 03:46:46,995 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 23:47:01] 2025-06-04 03:46:46,995 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678074794/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 23:47:01] 2025-06-04 03:46:46,996 | INFO     | extracted standard info from prmon json
[2025-06-03 23:47:01] 2025-06-04 03:46:46,996 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 23:47:01] 2025-06-04 03:46:46,996 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 23:47:01] 2025-06-04 03:46:46,997 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 23:47:01] 2025-06-04 03:46:46,997 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 23:47:01] 2025-06-04 03:46:46,998 | INFO     | fitting pss+swap vs Time
[2025-06-03 23:47:01] 2025-06-04 03:46:46,998 | INFO     | sum of square deviations: 8362947.5
[2025-06-03 23:47:01] 2025-06-04 03:46:46,999 | INFO     | sum of deviations: 4159086933.0000005
[2025-06-03 23:47:01] 2025-06-04 03:46:46,999 | INFO     | mean x: 1749007744.5
[2025-06-03 23:47:01] 2025-06-04 03:46:46,999 | INFO     | mean y: 2372699.066666667
[2025-06-03 23:47:01] 2025-06-04 03:46:46,999 | INFO     | -- intersect: -869819571760.7968
[2025-06-03 23:47:01] 2025-06-04 03:46:46,999 | INFO     | intersect: -869819571760.7968
[2025-06-03 23:47:01] 2025-06-04 03:46:46,999 | INFO     | chi2: 0.6045195410051298
[2025-06-03 23:47:01] 2025-06-04 03:46:46,999 | INFO     | -- intersect: -869819571760.7968
[2025-06-03 23:47:01] 2025-06-04 03:46:46,999 | INFO     | current memory leak: 497.32 B/s (using 30 data points, chi2=0.60)
[2025-06-03 23:47:01] 2025-06-04 03:46:47,000 | INFO     | ..............................
[2025-06-03 23:47:01] 2025-06-04 03:46:47,000 | INFO     | . Timing measurements:
[2025-06-03 23:47:01] 2025-06-04 03:46:47,000 | INFO     | . get job = 0 s
[2025-06-03 23:47:01] 2025-06-04 03:46:47,000 | INFO     | . initial setup = 2 s
[2025-06-03 23:47:01] 2025-06-04 03:46:47,000 | INFO     | . payload setup = 8 s
[2025-06-03 23:47:01] 2025-06-04 03:46:47,000 | INFO     | . stage-in = 0 s
[2025-06-03 23:47:01] 2025-06-04 03:46:47,000 | INFO     | . payload execution = 2245 s
[2025-06-03 23:47:01] 2025-06-04 03:46:47,000 | INFO     | . stage-out = 0 s
[2025-06-03 23:47:01] 2025-06-04 03:46:47,000 | INFO     | . log creation = 0 s
[2025-06-03 23:47:01] 2025-06-04 03:46:47,000 | INFO     | ..............................
[2025-06-03 23:47:01] 2025-06-04 03:46:47,088 | INFO     | 
[2025-06-03 23:47:01] 2025-06-04 03:46:47,089 | INFO     | job summary report
[2025-06-03 23:47:01] 2025-06-04 03:46:47,089 | INFO     | --------------------------------------------------
[2025-06-03 23:47:01] 2025-06-04 03:46:47,089 | INFO     | PanDA job id: 6678074794
[2025-06-03 23:47:01] 2025-06-04 03:46:47,089 | INFO     | task id: 45006595
[2025-06-03 23:47:01] 2025-06-04 03:46:47,090 | INFO     | errors: (none)
[2025-06-03 23:47:01] 2025-06-04 03:46:47,090 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 23:47:01] 2025-06-04 03:46:47,090 | INFO     | pilot state: finished 
[2025-06-03 23:47:01] 2025-06-04 03:46:47,090 | INFO     | transexitcode: 0
[2025-06-03 23:47:01] 2025-06-04 03:46:47,090 | INFO     | exeerrorcode: 0
[2025-06-03 23:47:01] 2025-06-04 03:46:47,090 | INFO     | exeerrordiag: 
[2025-06-03 23:47:01] 2025-06-04 03:46:47,091 | INFO     | exitcode: 0
[2025-06-03 23:47:01] 2025-06-04 03:46:47,091 | INFO     | exitmsg: OK
[2025-06-03 23:47:01] 2025-06-04 03:46:47,091 | INFO     | cpuconsumptiontime: 19398 s
[2025-06-03 23:47:01] 2025-06-04 03:46:47,091 | INFO     | nevents: 400
[2025-06-03 23:47:01] 2025-06-04 03:46:47,091 | INFO     | neventsw: 0
[2025-06-03 23:47:01] 2025-06-04 03:46:47,091 | INFO     | pid: 1480852
[2025-06-03 23:47:01] 2025-06-04 03:46:47,091 | INFO     | pgrp: 1480852
[2025-06-03 23:47:01] 2025-06-04 03:46:47,092 | INFO     | corecount: 12
[2025-06-03 23:47:01] 2025-06-04 03:46:47,092 | INFO     | event service: False
[2025-06-03 23:47:01] 2025-06-04 03:46:47,092 | INFO     | sizes: {0: 2405184, 1: 2405184, 6: 2405418, 11: 2405446, 2258: 2430339, 2259: 2430338, 2261: 2439519, 2267: 2439633}
[2025-06-03 23:47:01] 2025-06-04 03:46:47,092 | INFO     | --------------------------------------------------
[2025-06-03 23:47:01] 2025-06-04 03:46:47,092 | INFO     | 
[2025-06-03 23:47:01] 2025-06-04 03:46:47,092 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 23:47:01] 2025-06-04 03:46:47,117 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 23:47:01] 2025-06-04 03:46:47,118 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 23:47:01] 2025-06-04 03:46:47,118 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 23:47:01] 2025-06-04 03:46:47,118 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 23:47:01] 2025-06-04 03:46:47,118 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 23:47:01] 2025-06-04 03:46:47,118 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 23:47:01] 2025-06-04 03:46:47,118 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 23:47:01] 2025-06-04 03:46:47,119 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 23:47:01] 2025-06-04 03:46:47,119 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 23:47:01] 2025-06-04 03:46:47,119 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 23:47:01] 2025-06-04 03:46:47,119 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 23:47:01] 2025-06-04 03:46:47,119 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 23:47:01] 2025-06-04 03:46:47,119 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 23:47:01] 2025-06-04 03:46:47,119 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 23:47:01] 2025-06-04 03:46:47,120 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 23:47:01] 2025-06-04 03:46:47,120 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 23:47:01] 2025-06-04 03:46:47,120 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 23:47:01] 2025-06-04 03:46:47,120 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 23:47:01] 2025-06-04 03:46:47,120 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 23:47:01] 2025-06-04 03:46:47,120 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 23:47:01] 2025-06-04 03:46:47,120 | INFO     | job 6678074794 has completed (purged errors)
[2025-06-03 23:47:01] 2025-06-04 03:46:47,121 | INFO     | overall cleanup function is called
[2025-06-03 23:47:01] 2025-06-04 03:46:48,130 | INFO     | --- collectZombieJob: --- 10, [1480852]
[2025-06-03 23:47:01] 2025-06-04 03:46:48,130 | INFO     | zombie collector waiting for pid 1480852
[2025-06-03 23:47:01] 2025-06-04 03:46:48,131 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 23:47:01] 2025-06-04 03:46:48,131 | INFO     | collected zombie processes
[2025-06-03 23:47:01] 2025-06-04 03:46:48,131 | INFO     | will attempt to kill all subprocesses of pid=1480852
[2025-06-03 23:47:01] 2025-06-04 03:46:48,265 | INFO     | process IDs to be killed: [1480852] (in reverse order)
[2025-06-03 23:47:01] 2025-06-04 03:46:48,326 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 23:47:01] 2025-06-04 03:46:48,327 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 23:47:01] 2025-06-04 03:46:48,338 | INFO     | did not find any defunct processes belonging to 1480852
[2025-06-03 23:47:01] 2025-06-04 03:46:48,344 | INFO     | did not find any defunct processes belonging to 1480852
[2025-06-03 23:47:01] 2025-06-04 03:46:48,345 | INFO     | ready for new job
[2025-06-03 23:47:01] 2025-06-04 03:46:48,345 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 23:47:01] 2025-06-04 03:46:48,346 | INFO     | **************************************
[2025-06-03 23:47:01] 2025-06-04 03:46:48,346 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 23:47:01] 2025-06-04 03:46:48,346 | INFO     | **************************************
[2025-06-03 23:47:01] 2025-06-04 03:46:48,346 | INFO     | 
[2025-06-03 23:47:01] 2025-06-04 03:46:48,359 | INFO     | architecture information:
[2025-06-03 23:47:01] 2025-06-04 03:46:48,360 | INFO     | executing command: cat /etc/os-release
[2025-06-03 23:47:01] 2025-06-04 03:46:48,376 | INFO     | cat /etc/os-release:
[2025-06-03 23:47:01] NAME="CentOS Linux"
[2025-06-03 23:47:01] VERSION="7 (Core)"
[2025-06-03 23:47:01] ID="centos"
[2025-06-03 23:47:01] ID_LIKE="rhel fedora"
[2025-06-03 23:47:01] VERSION_ID="7"
[2025-06-03 23:47:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 23:47:01] ANSI_COLOR="0;31"
[2025-06-03 23:47:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 23:47:01] HOME_URL="https://www.centos.org/"
[2025-06-03 23:47:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 23:47:01] 
[2025-06-03 23:47:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 23:47:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 23:47:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 23:47:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 23:47:01] 
[2025-06-03 23:47:01] 2025-06-04 03:46:48,377 | INFO     | **************************************
[2025-06-03 23:47:01] 2025-06-04 03:46:48,880 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 23:47:01] 2025-06-04 03:46:48,901 | INFO     | sufficient remaining disk space (76375130112 B)
[2025-06-03 23:47:01] 2025-06-04 03:46:48,901 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 23:47:01] 2025-06-04 03:46:48,902 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 23:47:01] 2025-06-04 03:46:48,902 | INFO     | update_server=False
[2025-06-03 23:47:01] 2025-06-04 03:46:48,902 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 23:47:01] 2025-06-04 03:46:48,902 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 23:47:01] 2025-06-04 03:46:48,903 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:47:01] 2025-06-04 03:46:48,903 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 23:47:01] 2025-06-04 03:46:48,903 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 23:47:01] 2025-06-04 03:46:48,904 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 23:47:01] 2025-06-04 03:46:48,904 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 23:47:01] 2025-06-04 03:46:49,401 | INFO     | all job control threads have been joined
[2025-06-03 23:47:01] 2025-06-04 03:46:49,470 | INFO     | all payload control threads have been joined
[2025-06-03 23:47:01] 2025-06-04 03:46:49,516 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:47:01] 2025-06-04 03:46:49,517 | INFO     | aborting loop
[2025-06-03 23:47:01] 2025-06-04 03:46:49,899 | INFO     | all data control threads have been joined
[2025-06-03 23:47:01] 2025-06-04 03:46:49,903 | INFO     | [job] retrieve thread has finished
[2025-06-03 23:47:01] 2025-06-04 03:46:49,909 | INFO     | [job] queue monitor thread has finished
[2025-06-03 23:47:01] 2025-06-04 03:46:50,407 | INFO     | [job] control thread has finished
[2025-06-03 23:47:01] 2025-06-04 03:46:50,475 | INFO     | [payload] control thread has finished
[2025-06-03 23:47:01] 2025-06-04 03:46:50,493 | INFO     | [data] copytool_in thread has finished
[2025-06-03 23:47:01] 2025-06-04 03:46:50,503 | INFO     | [payload] failed_post thread has finished
[2025-06-03 23:47:01] 2025-06-04 03:46:50,507 | INFO     | [job] validate thread has finished
[2025-06-03 23:47:01] 2025-06-04 03:46:50,522 | INFO     | [job] job monitor thread has finished
[2025-06-03 23:47:01] 2025-06-04 03:46:50,694 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 23:47:01] 2025-06-04 03:46:50,818 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 23:47:01] 2025-06-04 03:46:50,905 | INFO     | [data] control thread has finished
[2025-06-03 23:47:01] 2025-06-04 03:46:50,909 | INFO     | [data] copytool_out thread has finished
[2025-06-03 23:47:01] 2025-06-04 03:46:51,010 | INFO     | [payload] validate_post thread has finished
[2025-06-03 23:47:01] 2025-06-04 03:46:51,034 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 23:47:01] 2025-06-04 03:46:51,054 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 23:47:01] 2025-06-04 03:46:51,294 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 23:47:01] 2025-06-04 03:46:55,061 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 23:47:01] 2025-06-04 03:46:56,171 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139745607038784)>', '<ExcThread(monitor, started 139745250227968)>']
[2025-06-03 23:47:01] 2025-06-04 03:46:56,944 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 23:47:01] 2025-06-04 03:46:56,944 | INFO     | [monitor] control thread has ended
[2025-06-03 23:47:01] 2025-06-04 03:47:01,197 | INFO     | all workflow threads have been joined
[2025-06-03 23:47:01] 2025-06-04 03:47:01,198 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 23:47:01] 2025-06-04 03:47:01,199 | INFO     | traces error code: 0
[2025-06-03 23:47:01] 2025-06-04 03:47:01,199 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 23:47:01] 2025-06-04 03:47:01,298 [wrapper] ==== pilot stdout END ====
[2025-06-03 23:47:01] 2025-06-04 03:47:01,302 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 23:47:01] 2025-06-04 03:47:01,307 [wrapper] pilotpid: 1473870
[2025-06-03 23:47:01] 2025-06-04 03:47:01,312 [wrapper] Pilot exit status: 0
[2025-06-03 23:47:01] 2025-06-04 03:47:01,329 [wrapper] pandaids: 6678074794
[2025-06-03 23:47:01] 2025-06-04 03:47:01,376 [wrapper] cleanup supervisor_pilot 1536096 1473871
[2025-06-03 23:47:01] 2025-06-04 03:47:01,381 [wrapper] Test setup, not cleaning
[2025-06-03 23:47:01] 2025-06-04 03:47:01,385 [wrapper] apfmon messages muted
[2025-06-03 23:47:01] 2025-06-04 03:47:01,389 [wrapper] ==== wrapper stdout END ====
[2025-06-03 23:47:01] 2025-06-04 03:47:01,393 [wrapper] ==== wrapper stderr END ====
[2025-06-03 23:47:01]  *** Error codes and diagnostics ***
[2025-06-03 23:47:01]     "exeErrorCode": 0,
[2025-06-03 23:47:01]     "exeErrorDiag": "",
[2025-06-03 23:47:01]     "pilotErrorCode": 0,
[2025-06-03 23:47:01]     "pilotErrorDiag": "",
[2025-06-03 23:47:01]  *** Listing of results directory ***
[2025-06-03 23:47:01] total 388208
[2025-06-03 23:47:01] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 17:15 pilot3.tar.gz
[2025-06-03 23:47:01] -rwx------. 1 boincer umatlas     37140 Jun  3 17:39 runpilot2-wrapper.sh
[2025-06-03 23:47:01] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 17:39 queuedata.json
[2025-06-03 23:47:01] -rw-r--r--. 1 boincer umatlas       100 Jun  3 23:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 23:47:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 23:08 run_atlas
[2025-06-03 23:47:01] -rw-r--r--. 1 boincer umatlas       105 Jun  3 23:08 job.xml
[2025-06-03 23:47:01] -rw-r--r--. 2 boincer umatlas 216509196 Jun  3 23:08 EVNT.45006593._001848.pool.root.1
[2025-06-03 23:47:01] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 23:08 start_atlas.sh
[2025-06-03 23:47:01] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 23:08 shared
[2025-06-03 23:47:01] -rw-r--r--. 2 boincer umatlas    508882 Jun  3 23:08 input.tar.gz
[2025-06-03 23:47:01] -rw-r--r--. 1 boincer umatlas         0 Jun  3 23:08 boinc_lockfile
[2025-06-03 23:47:01] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 23:08 pandaJob.out
[2025-06-03 23:47:01] -rw-------. 1 boincer umatlas    986077 Jun  3 23:08 agis_schedconf.cvmfs.json
[2025-06-03 23:47:01] -rw-------. 1 boincer umatlas   1603667 Jun  3 23:08 agis_ddmendpoints.agis.ALL.json
[2025-06-03 23:47:01] drwx------. 4 boincer umatlas      4096 Jun  3 23:08 pilot3
[2025-06-03 23:47:01] -rw-r--r--. 1 boincer umatlas      6842 Jun  3 23:37 init_data.xml
[2025-06-03 23:47:01] -rw-------. 1 boincer umatlas        95 Jun  3 23:46 pilot_heartbeat.json
[2025-06-03 23:47:01] -rw-r--r--. 1 boincer umatlas       529 Jun  3 23:46 boinc_task_state.xml
[2025-06-03 23:47:01] -rw-------. 1 boincer umatlas 175976144 Jun  3 23:46 HITS.45006595._046081.pool.root.1
[2025-06-03 23:47:01] -rw-------. 1 boincer umatlas      1028 Jun  3 23:46 memory_monitor_summary.json
[2025-06-03 23:47:01] -rw-------. 1 boincer umatlas    348806 Jun  3 23:46 log.45006595._046081.job.log.tgz.1
[2025-06-03 23:47:01] -rw-------. 1 boincer umatlas      7710 Jun  3 23:46 heartbeat.json
[2025-06-03 23:47:01] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 23:46 boinc_mmap_file
[2025-06-03 23:47:01] -rw-r--r--. 1 boincer umatlas        27 Jun  3 23:46 wrapper_checkpoint.txt
[2025-06-03 23:47:01] -rw-------. 1 boincer umatlas      4476 Jun  3 23:47 pilotlog.txt
[2025-06-03 23:47:01] -rw-------. 1 boincer umatlas    255291 Jun  3 23:47 log.45006595._046081.job.log.1
[2025-06-03 23:47:01] -rw-------. 1 boincer umatlas       357 Jun  3 23:47 output.list
[2025-06-03 23:47:01] -rw-r--r--. 1 boincer umatlas       620 Jun  3 23:47 runtime_log
[2025-06-03 23:47:01] -rw-------. 1 boincer umatlas    624640 Jun  3 23:47 result.tar.gz
[2025-06-03 23:47:01] -rw-------. 1 boincer umatlas       650 Jun  3 23:47 wKHNDm7Wog7n9Rq4apOajLDm4fhM0noT9bVof3QYDmkzZKDmKd5cpm.diag
[2025-06-03 23:47:01] -rw-r--r--. 1 boincer umatlas      8666 Jun  3 23:47 runtime_log.err
[2025-06-03 23:47:01] -rw-r--r--. 1 boincer umatlas     21353 Jun  3 23:47 stderr.txt
[2025-06-03 23:47:01] HITS file was successfully produced:
[2025-06-03 23:47:01] -rw-------. 1 boincer umatlas 175976144 Jun  3 23:46 shared/HITS.pool.root.1
[2025-06-03 23:47:01]  *** Contents of shared directory: ***
[2025-06-03 23:47:01] total 384416
[2025-06-03 23:47:01] -rw-r--r--. 2 boincer umatlas 216509196 Jun  3 23:08 ATLAS.root_0
[2025-06-03 23:47:01] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 23:08 start_atlas.sh
[2025-06-03 23:47:01] -rw-r--r--. 2 boincer umatlas    508882 Jun  3 23:08 input.tar.gz
[2025-06-03 23:47:01] -rw-------. 1 boincer umatlas 175976144 Jun  3 23:46 HITS.pool.root.1
[2025-06-03 23:47:01] -rw-------. 1 boincer umatlas    624640 Jun  3 23:47 result.tar.gz
23:47:02 (1470154): run_atlas exited; CPU time 19418.271720
23:47:02 (1470154): called boinc_finish(0)

</stderr_txt>
]]>

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