Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:21:59 (28092): wrapper (7.7.26015): starting
22:21:59 (28092): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 22:21:59] Arguments: --nthreads 12
[2025-06-03 22:21:59] Threads: 12
[2025-06-03 22:21:59] Checking for CVMFS
[2025-06-03 22:22:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 22:22:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 22:22:00] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 22:22:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 22:22:00] 2.11.2.0 2916 35029 86164 146765 2 55 10375399 20275200 1 130560 0 15524725 99.982 6494144 7768 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 22:22:00] CVMFS is ok
[2025-06-03 22:22:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 22:22:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 22:22:00] Further information can be found at the LHC@home message board.
[2025-06-03 22:22:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 22:22:00] Checking for apptainer binary...
[2025-06-03 22:22:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 22:22:00] Running /usr/bin/apptainer --version
[2025-06-03 22:22:00] apptainer version 1.3.2-1.el7
[2025-06-03 22:22:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 22:22:01] c-205-23.aglt2.org
[2025-06-03 22:22:01] apptainer works
[2025-06-03 22:22:01] Set ATHENA_PROC_NUMBER=12
[2025-06-03 22:22:01] Set ATHENA_CORE_NUMBER=12
[2025-06-03 22:22:01] Starting ATLAS job with PandaID=6678074824
[2025-06-03 22:22:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 23:30:31]  *** The last 200 lines of the pilot log: ***
[2025-06-03 23:30:31]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 23:30:31]  is_altstaged=None
[2025-06-03 23:30:31]  is_tar=False
[2025-06-03 23:30:31]  lfn=log.45006595._046111.job.log.tgz.1
[2025-06-03 23:30:31]  mtime=0
[2025-06-03 23:30:31]  protocol_id=None
[2025-06-03 23:30:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 23:30:31]  replicas=None
[2025-06-03 23:30:31]  scope=mc23_13p6TeV
[2025-06-03 23:30:31]  status=None
[2025-06-03 23:30:31]  status_code=0
[2025-06-03 23:30:31]  storage_token=
[2025-06-03 23:30:31]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678074824/log.45006595._046111.job.log.tgz.1
[2025-06-03 23:30:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3a/fb/log.45006595._046111.job.log.tgz.1
[2025-06-03 23:30:31]  workdir=None
[2025-06-03 23:30:31] ]
[2025-06-03 23:30:31] 2025-06-04 03:30:04,529 | INFO     | transferring file log.45006595._046111.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678074824/log.45006595._046111.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 23:30:31] 2025-06-04 03:30:04,529 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678074824/log.45006595._046111.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._046111.job
[2025-06-03 23:30:31] 2025-06-04 03:30:04,552 | INFO     | adding to output.list: log.45006595._046111.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3a/fb/log.45006595._046111.job.log.tg
[2025-06-03 23:30:31] 2025-06-04 03:30:04,553 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 23:30:31] 2025-06-04 03:30:04,553 | INFO     | summary of transferred files:
[2025-06-03 23:30:31] 2025-06-04 03:30:04,553 | INFO     |  -- lfn=log.45006595._046111.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 23:30:31] 2025-06-04 03:30:04,554 | INFO     | stage-out finished correctly
[2025-06-03 23:30:31] 2025-06-04 03:30:04,639 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 23:30:31] 2025-06-04 03:30:04,720 | INFO     | job 6678074824 has state=finished
[2025-06-03 23:30:31] 2025-06-04 03:30:04,720 | INFO     | preparing for final server update for job 6678074824 in state='finished'
[2025-06-03 23:30:31] 2025-06-04 03:30:04,781 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-03 23:30:31] 2025-06-04 03:30:04,781 | INFO     | this job has now completed (state=finished)
[2025-06-03 23:30:31] 2025-06-04 03:30:04,781 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 23:30:31] 2025-06-04 03:30:04,781 | INFO     | log transfer has been attempted: DONE
[2025-06-03 23:30:31] 2025-06-04 03:30:04,781 | INFO     | job 6678074824 has finished - writing final server update
[2025-06-03 23:30:31] 2025-06-04 03:30:04,782 | INFO     | total number of processed events: 400 (read)
[2025-06-03 23:30:31] 2025-06-04 03:30:04,783 | INFO     | executing command: lscpu
[2025-06-03 23:30:31] 2025-06-04 03:30:04,810 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 23:30:31] 2025-06-04 03:30:06,396 | INFO     | monitor loop #305: job 0:6678074824 is in state 'finished'
[2025-06-03 23:30:31] 2025-06-04 03:30:06,396 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 23:30:31] 2025-06-04 03:30:08,899 | INFO     | monitor loop #306: job 0:6678074824 is in state 'finished'
[2025-06-03 23:30:31] 2025-06-04 03:30:08,899 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 23:30:31] 2025-06-04 03:30:10,831 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 23:30:31] 2025-06-04 03:30:10,837 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678074824/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 23:30:31] 2025-06-04 03:30:10,838 | INFO     | extracted standard info from prmon json
[2025-06-03 23:30:31] 2025-06-04 03:30:10,838 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 23:30:31] 2025-06-04 03:30:10,838 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 23:30:31] 2025-06-04 03:30:10,839 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 23:30:31] 2025-06-04 03:30:10,839 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 23:30:31] 2025-06-04 03:30:10,840 | INFO     | fitting pss+swap vs Time
[2025-06-03 23:30:31] 2025-06-04 03:30:10,841 | INFO     | sum of square deviations: 66959395.0
[2025-06-03 23:30:31] 2025-06-04 03:30:10,841 | INFO     | sum of deviations: -2935392956.0
[2025-06-03 23:30:31] 2025-06-04 03:30:10,841 | INFO     | mean x: 1749005870.5
[2025-06-03 23:30:31] 2025-06-04 03:30:10,841 | INFO     | mean y: 2890157.933333333
[2025-06-03 23:30:31] 2025-06-04 03:30:10,841 | INFO     | -- intersect: 76676514707.08508
[2025-06-03 23:30:31] 2025-06-04 03:30:10,841 | INFO     | intersect: 76676514707.08508
[2025-06-03 23:30:31] 2025-06-04 03:30:10,842 | INFO     | chi2: 0.09766034069096109
[2025-06-03 23:30:31] 2025-06-04 03:30:10,842 | INFO     | -- intersect: 76676514707.08508
[2025-06-03 23:30:31] 2025-06-04 03:30:10,842 | INFO     | current memory leak: -43.84 B/s (using 60 data points, chi2=0.10)
[2025-06-03 23:30:31] 2025-06-04 03:30:10,842 | INFO     | ..............................
[2025-06-03 23:30:31] 2025-06-04 03:30:10,842 | INFO     | . Timing measurements:
[2025-06-03 23:30:31] 2025-06-04 03:30:10,842 | INFO     | . get job = 0 s
[2025-06-03 23:30:31] 2025-06-04 03:30:10,843 | INFO     | . initial setup = 2 s
[2025-06-03 23:30:31] 2025-06-04 03:30:10,843 | INFO     | . payload setup = 9 s
[2025-06-03 23:30:31] 2025-06-04 03:30:10,843 | INFO     | . stage-in = 0 s
[2025-06-03 23:30:31] 2025-06-04 03:30:10,843 | INFO     | . payload execution = 4039 s
[2025-06-03 23:30:31] 2025-06-04 03:30:10,843 | INFO     | . stage-out = 0 s
[2025-06-03 23:30:31] 2025-06-04 03:30:10,843 | INFO     | . log creation = 0 s
[2025-06-03 23:30:31] 2025-06-04 03:30:10,843 | INFO     | ..............................
[2025-06-03 23:30:31] 2025-06-04 03:30:10,940 | INFO     | 
[2025-06-03 23:30:31] 2025-06-04 03:30:10,941 | INFO     | job summary report
[2025-06-03 23:30:31] 2025-06-04 03:30:10,941 | INFO     | --------------------------------------------------
[2025-06-03 23:30:31] 2025-06-04 03:30:10,941 | INFO     | PanDA job id: 6678074824
[2025-06-03 23:30:31] 2025-06-04 03:30:10,941 | INFO     | task id: 45006595
[2025-06-03 23:30:31] 2025-06-04 03:30:10,941 | INFO     | errors: (none)
[2025-06-03 23:30:31] 2025-06-04 03:30:10,941 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 23:30:31] 2025-06-04 03:30:10,941 | INFO     | pilot state: finished 
[2025-06-03 23:30:31] 2025-06-04 03:30:10,941 | INFO     | transexitcode: 0
[2025-06-03 23:30:31] 2025-06-04 03:30:10,941 | INFO     | exeerrorcode: 0
[2025-06-03 23:30:31] 2025-06-04 03:30:10,942 | INFO     | exeerrordiag: 
[2025-06-03 23:30:31] 2025-06-04 03:30:10,942 | INFO     | exitcode: 0
[2025-06-03 23:30:31] 2025-06-04 03:30:10,942 | INFO     | exitmsg: OK
[2025-06-03 23:30:31] 2025-06-04 03:30:10,942 | INFO     | cpuconsumptiontime: 42208 s
[2025-06-03 23:30:31] 2025-06-04 03:30:10,942 | INFO     | nevents: 400
[2025-06-03 23:30:31] 2025-06-04 03:30:10,942 | INFO     | neventsw: 0
[2025-06-03 23:30:31] 2025-06-04 03:30:10,942 | INFO     | pid: 6041
[2025-06-03 23:30:31] 2025-06-04 03:30:10,942 | INFO     | pgrp: 6041
[2025-06-03 23:30:31] 2025-06-04 03:30:10,942 | INFO     | corecount: 12
[2025-06-03 23:30:31] 2025-06-04 03:30:10,943 | INFO     | event service: False
[2025-06-03 23:30:31] 2025-06-04 03:30:10,943 | INFO     | sizes: {0: 2405178, 1: 2405178, 5: 2405412, 11: 2405468, 4053: 2431280, 4054: 2440405, 4060: 2440519}
[2025-06-03 23:30:31] 2025-06-04 03:30:10,943 | INFO     | --------------------------------------------------
[2025-06-03 23:30:31] 2025-06-04 03:30:10,943 | INFO     | 
[2025-06-03 23:30:31] 2025-06-04 03:30:10,943 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 23:30:31] 2025-06-04 03:30:10,967 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 23:30:31] 2025-06-04 03:30:10,968 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 23:30:31] 2025-06-04 03:30:10,968 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 23:30:31] 2025-06-04 03:30:10,968 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 23:30:31] 2025-06-04 03:30:10,968 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 23:30:31] 2025-06-04 03:30:10,968 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 23:30:31] 2025-06-04 03:30:10,969 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 23:30:31] 2025-06-04 03:30:10,969 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 23:30:31] 2025-06-04 03:30:10,969 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 23:30:31] 2025-06-04 03:30:10,969 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 23:30:31] 2025-06-04 03:30:10,969 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 23:30:31] 2025-06-04 03:30:10,969 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 23:30:31] 2025-06-04 03:30:10,970 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 23:30:31] 2025-06-04 03:30:10,970 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 23:30:31] 2025-06-04 03:30:10,970 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 23:30:31] 2025-06-04 03:30:10,970 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 23:30:31] 2025-06-04 03:30:10,970 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 23:30:31] 2025-06-04 03:30:10,970 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 23:30:31] 2025-06-04 03:30:10,970 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 23:30:31] 2025-06-04 03:30:10,970 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 23:30:31] 2025-06-04 03:30:10,971 | INFO     | job 6678074824 has completed (purged errors)
[2025-06-03 23:30:31] 2025-06-04 03:30:10,971 | INFO     | overall cleanup function is called
[2025-06-03 23:30:31] 2025-06-04 03:30:11,978 | INFO     | --- collectZombieJob: --- 10, [6041]
[2025-06-03 23:30:31] 2025-06-04 03:30:11,978 | INFO     | zombie collector waiting for pid 6041
[2025-06-03 23:30:31] 2025-06-04 03:30:11,979 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 23:30:31] 2025-06-04 03:30:11,979 | INFO     | collected zombie processes
[2025-06-03 23:30:31] 2025-06-04 03:30:11,979 | INFO     | will attempt to kill all subprocesses of pid=6041
[2025-06-03 23:30:31] 2025-06-04 03:30:12,075 | INFO     | process IDs to be killed: [6041] (in reverse order)
[2025-06-03 23:30:31] 2025-06-04 03:30:12,125 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 23:30:31] 2025-06-04 03:30:12,125 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 23:30:31] 2025-06-04 03:30:12,134 | INFO     | did not find any defunct processes belonging to 6041
[2025-06-03 23:30:31] 2025-06-04 03:30:12,141 | INFO     | did not find any defunct processes belonging to 6041
[2025-06-03 23:30:31] 2025-06-04 03:30:12,142 | INFO     | ready for new job
[2025-06-03 23:30:31] 2025-06-04 03:30:12,142 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 23:30:31] 2025-06-04 03:30:12,144 | INFO     | **************************************
[2025-06-03 23:30:31] 2025-06-04 03:30:12,144 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 23:30:31] 2025-06-04 03:30:12,144 | INFO     | **************************************
[2025-06-03 23:30:31] 2025-06-04 03:30:12,145 | INFO     | 
[2025-06-03 23:30:31] 2025-06-04 03:30:12,145 | INFO     | architecture information:
[2025-06-03 23:30:31] 2025-06-04 03:30:12,146 | INFO     | executing command: cat /etc/os-release
[2025-06-03 23:30:31] 2025-06-04 03:30:12,163 | INFO     | cat /etc/os-release:
[2025-06-03 23:30:31] NAME="CentOS Linux"
[2025-06-03 23:30:31] VERSION="7 (Core)"
[2025-06-03 23:30:31] ID="centos"
[2025-06-03 23:30:31] ID_LIKE="rhel fedora"
[2025-06-03 23:30:31] VERSION_ID="7"
[2025-06-03 23:30:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 23:30:31] ANSI_COLOR="0;31"
[2025-06-03 23:30:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 23:30:31] HOME_URL="https://www.centos.org/"
[2025-06-03 23:30:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 23:30:31] 
[2025-06-03 23:30:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 23:30:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 23:30:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 23:30:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 23:30:31] 
[2025-06-03 23:30:31] 2025-06-04 03:30:12,163 | INFO     | **************************************
[2025-06-03 23:30:31] 2025-06-04 03:30:12,227 | INFO     | PID=31899 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 23:30:31] 2025-06-04 03:30:12,666 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 23:30:31] 2025-06-04 03:30:12,684 | INFO     | sufficient remaining disk space (29417799680 B)
[2025-06-03 23:30:31] 2025-06-04 03:30:12,684 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 23:30:31] 2025-06-04 03:30:12,685 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 23:30:31] 2025-06-04 03:30:12,685 | INFO     | update_server=False
[2025-06-03 23:30:31] 2025-06-04 03:30:12,685 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 23:30:31] 2025-06-04 03:30:12,685 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 23:30:31] 2025-06-04 03:30:12,686 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 23:30:31] 2025-06-04 03:30:12,686 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 23:30:31] 2025-06-04 03:30:12,686 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 23:30:31] 2025-06-04 03:30:12,686 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:30:31] 2025-06-04 03:30:12,687 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:30:31] 2025-06-04 03:30:12,687 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 23:30:31] 2025-06-04 03:30:12,687 | INFO     | aborting loop
[2025-06-03 23:30:31] 2025-06-04 03:30:13,251 | INFO     | all job control threads have been joined
[2025-06-03 23:30:31] 2025-06-04 03:30:13,373 | INFO     | all data control threads have been joined
[2025-06-03 23:30:31] 2025-06-04 03:30:13,617 | INFO     | all payload control threads have been joined
[2025-06-03 23:30:31] 2025-06-04 03:30:13,691 | INFO     | [job] retrieve thread has finished
[2025-06-03 23:30:31] 2025-06-04 03:30:13,692 | INFO     | [job] queue monitor thread has finished
[2025-06-03 23:30:31] 2025-06-04 03:30:13,693 | INFO     | [job] job monitor thread has finished
[2025-06-03 23:30:31] 2025-06-04 03:30:13,716 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 23:30:31] 2025-06-04 03:30:13,719 | INFO     | [data] copytool_in thread has finished
[2025-06-03 23:30:31] 2025-06-04 03:30:14,257 | INFO     | [job] control thread has finished
[2025-06-03 23:30:31] 2025-06-04 03:30:14,299 | INFO     | [payload] validate_post thread has finished
[2025-06-03 23:30:31] 2025-06-04 03:30:14,306 | INFO     | [payload] failed_post thread has finished
[2025-06-03 23:30:31] 2025-06-04 03:30:14,379 | INFO     | [data] control thread has finished
[2025-06-03 23:30:31] 2025-06-04 03:30:14,612 | INFO     | [job] validate thread has finished
[2025-06-03 23:30:31] 2025-06-04 03:30:14,622 | INFO     | [payload] control thread has finished
[2025-06-03 23:30:31] 2025-06-04 03:30:14,693 | INFO     | [data] copytool_out thread has finished
[2025-06-03 23:30:31] 2025-06-04 03:30:14,876 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 23:30:31] 2025-06-04 03:30:15,094 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 23:30:31] 2025-06-04 03:30:15,229 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 23:30:31] 2025-06-04 03:30:19,235 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 23:30:31] 2025-06-04 03:30:23,497 | INFO     | job.realtimelogging is not enabled
[2025-06-03 23:30:31] 2025-06-04 03:30:24,502 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 23:30:31] 2025-06-04 03:30:26,143 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140604450801472)>', '<ExcThread(monitor, started 140603731994368)>']
[2025-06-03 23:30:31] 2025-06-04 03:30:26,757 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 23:30:31] 2025-06-04 03:30:26,758 | INFO     | [monitor] control thread has ended
[2025-06-03 23:30:31] 2025-06-04 03:30:31,168 | INFO     | all workflow threads have been joined
[2025-06-03 23:30:31] 2025-06-04 03:30:31,168 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 23:30:31] 2025-06-04 03:30:31,169 | INFO     | traces error code: 0
[2025-06-03 23:30:31] 2025-06-04 03:30:31,169 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 23:30:31] 2025-06-04 03:30:31,270 [wrapper] ==== pilot stdout END ====
[2025-06-03 23:30:31] 2025-06-04 03:30:31,274 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 23:30:31] 2025-06-04 03:30:31,277 [wrapper] pilotpid: 31899
[2025-06-03 23:30:31] 2025-06-04 03:30:31,281 [wrapper] Pilot exit status: 0
[2025-06-03 23:30:31] 2025-06-04 03:30:31,295 [wrapper] pandaids: 6678074824
[2025-06-03 23:30:31] 2025-06-04 03:30:31,334 [wrapper] cleanup supervisor_pilot  7255 31900
[2025-06-03 23:30:31] 2025-06-04 03:30:31,338 [wrapper] Test setup, not cleaning
[2025-06-03 23:30:31] 2025-06-04 03:30:31,342 [wrapper] apfmon messages muted
[2025-06-03 23:30:31] 2025-06-04 03:30:31,346 [wrapper] ==== wrapper stdout END ====
[2025-06-03 23:30:31] 2025-06-04 03:30:31,350 [wrapper] ==== wrapper stderr END ====
[2025-06-03 23:30:31]  *** Error codes and diagnostics ***
[2025-06-03 23:30:31]     "exeErrorCode": 0,
[2025-06-03 23:30:31]     "exeErrorDiag": "",
[2025-06-03 23:30:31]     "pilotErrorCode": 0,
[2025-06-03 23:30:31]     "pilotErrorDiag": "",
[2025-06-03 23:30:31]  *** Listing of results directory ***
[2025-06-03 23:30:31] total 391340
[2025-06-03 23:30:31] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 17:15 pilot3.tar.gz
[2025-06-03 23:30:31] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 17:39 queuedata.json
[2025-06-03 23:30:31] -rwx------ 1 boincer umatlas     37140 Jun  3 17:40 runpilot2-wrapper.sh
[2025-06-03 23:30:31] -rw-r--r-- 1 boincer umatlas       100 Jun  3 22:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 23:30:31] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 22:21 run_atlas
[2025-06-03 23:30:31] -rw-r--r-- 1 boincer umatlas       105 Jun  3 22:21 job.xml
[2025-06-03 23:30:31] -rw-r--r-- 2 boincer umatlas 215619315 Jun  3 22:21 EVNT.45006593._001850.pool.root.1
[2025-06-03 23:30:31] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 22:21 start_atlas.sh
[2025-06-03 23:30:31] drwxrwx--x 2 boincer umatlas      4096 Jun  3 22:21 shared
[2025-06-03 23:30:31] -rw-r--r-- 2 boincer umatlas    508883 Jun  3 22:21 input.tar.gz
[2025-06-03 23:30:31] -rw-r--r-- 1 boincer umatlas         0 Jun  3 22:21 boinc_lockfile
[2025-06-03 23:30:31] -rw-r--r-- 1 boincer umatlas      2522 Jun  3 22:22 pandaJob.out
[2025-06-03 23:30:31] -rw------- 1 boincer umatlas    986077 Jun  3 22:22 agis_schedconf.cvmfs.json
[2025-06-03 23:30:31] -rw------- 1 boincer umatlas   1603667 Jun  3 22:22 agis_ddmendpoints.agis.ALL.json
[2025-06-03 23:30:31] drwx------ 4 boincer umatlas      4096 Jun  3 22:22 pilot3
[2025-06-03 23:30:31] -rw------- 1 boincer umatlas 179794249 Jun  3 23:29 HITS.45006595._046111.pool.root.1
[2025-06-03 23:30:31] -rw-r--r-- 1 boincer umatlas       530 Jun  3 23:29 boinc_task_state.xml
[2025-06-03 23:30:31] -rw------- 1 boincer umatlas      1048 Jun  3 23:30 memory_monitor_summary.json
[2025-06-03 23:30:31] -rw------- 1 boincer umatlas    344778 Jun  3 23:30 log.45006595._046111.job.log.tgz.1
[2025-06-03 23:30:31] -rw------- 1 boincer umatlas        95 Jun  3 23:30 pilot_heartbeat.json
[2025-06-03 23:30:31] -rw------- 1 boincer umatlas      7747 Jun  3 23:30 heartbeat.json
[2025-06-03 23:30:31] -rw-r--r-- 1 boincer umatlas      5868 Jun  3 23:30 init_data.xml
[2025-06-03 23:30:31] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 23:30 boinc_mmap_file
[2025-06-03 23:30:31] -rw-r--r-- 1 boincer umatlas        27 Jun  3 23:30 wrapper_checkpoint.txt
[2025-06-03 23:30:31] -rw------- 1 boincer umatlas      4865 Jun  3 23:30 pilotlog.txt
[2025-06-03 23:30:31] -rw------- 1 boincer umatlas    395503 Jun  3 23:30 log.45006595._046111.job.log.1
[2025-06-03 23:30:31] -rw------- 1 boincer umatlas       357 Jun  3 23:30 output.list
[2025-06-03 23:30:31] -rw-r--r-- 1 boincer umatlas       620 Jun  3 23:30 runtime_log
[2025-06-03 23:30:31] -rw------- 1 boincer umatlas    757760 Jun  3 23:30 result.tar.gz
[2025-06-03 23:30:31] -rw-r--r-- 1 boincer umatlas      8661 Jun  3 23:30 runtime_log.err
[2025-06-03 23:30:31] -rw------- 1 boincer umatlas       659 Jun  3 23:30 6CMMDmaYog7n9Rq4apOajLDm4fhM0noT9bVof3QYDmszZKDmLfQvDn.diag
[2025-06-03 23:30:31] -rw-r--r-- 1 boincer umatlas     21402 Jun  3 23:30 stderr.txt
[2025-06-03 23:30:31] HITS file was successfully produced:
[2025-06-03 23:30:31] -rw------- 1 boincer umatlas 179794249 Jun  3 23:29 shared/HITS.pool.root.1
[2025-06-03 23:30:31]  *** Contents of shared directory: ***
[2025-06-03 23:30:31] total 387416
[2025-06-03 23:30:31] -rw-r--r-- 2 boincer umatlas 215619315 Jun  3 22:21 ATLAS.root_0
[2025-06-03 23:30:31] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 22:21 start_atlas.sh
[2025-06-03 23:30:31] -rw-r--r-- 2 boincer umatlas    508883 Jun  3 22:21 input.tar.gz
[2025-06-03 23:30:31] -rw------- 1 boincer umatlas 179794249 Jun  3 23:29 HITS.pool.root.1
[2025-06-03 23:30:31] -rw------- 1 boincer umatlas    757760 Jun  3 23:30 result.tar.gz
23:30:32 (28092): run_atlas exited; CPU time 42175.459507
23:30:32 (28092): called boinc_finish(0)

</stderr_txt>
]]>

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