Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:12:59 (659324): wrapper (7.7.26015): starting
01:12:59 (659324): wrapper: running run_atlas (--nthreads 4)
[2025-06-07 01:12:59] Arguments: --nthreads 4
[2025-06-07 01:12:59] Threads: 4
[2025-06-07 01:12:59] Checking for CVMFS
[2025-06-07 01:12:59] No cvmfs_config command found, will try listing directly
[2025-06-07 01:12:59] CVMFS is ok
[2025-06-07 01:12:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-07 01:12:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-07 01:12:59] Further information can be found at the LHC@home message board.
[2025-06-07 01:12:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-07 01:12:59] Checking for apptainer binary...
[2025-06-07 01:12:59] which: no apptainer in ((null))
[2025-06-07 01:12:59] apptainer is not installed, using version from CVMFS
[2025-06-07 01:12:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-07 01:12:59] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-06-07 01:12:59] apptainer works
[2025-06-07 01:12:59] Set ATHENA_PROC_NUMBER=4
[2025-06-07 01:12:59] Set ATHENA_CORE_NUMBER=4
[2025-06-07 01:12:59] Starting ATLAS job with PandaID=6678150116
[2025-06-07 01:12:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-07 02:30:35]  *** The last 200 lines of the pilot log: ***
[2025-06-07 02:30:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-07 02:30:35]  replicas=None
[2025-06-07 02:30:35]  scope=mc23_13p6TeV
[2025-06-07 02:30:35]  status=None
[2025-06-07 02:30:35]  status_code=0
[2025-06-07 02:30:35]  storage_token=
[2025-06-07 02:30:35]  surl=/scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6678150116/log.45006595._046615.job.log.tgz.1
[2025-06-07 02:30:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/29/72/log.45006595._046615.job.log.tgz.1
[2025-06-07 02:30:35]  workdir=None
[2025-06-07 02:30:35] ]
[2025-06-07 02:30:35] 2025-06-07 00:30:11,514 | INFO     | transferring file log.45006595._046615.job.log.tgz.1 from /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6678150116/log.45006595._046615.job.log.tgz.1 to /scratch/b
[2025-06-07 02:30:35] 2025-06-07 00:30:11,514 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6678150116/log.45006595._046615.job.log.tgz.1 /scratch/boinc/var/slot28/slots/0/lo
[2025-06-07 02:30:35] 2025-06-07 00:30:11,532 | INFO     | adding to output.list: log.45006595._046615.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/29/72/log.45006595._046615.job.log.tg
[2025-06-07 02:30:35] 2025-06-07 00:30:11,533 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-07 02:30:35] 2025-06-07 00:30:11,533 | INFO     | summary of transferred files:
[2025-06-07 02:30:35] 2025-06-07 00:30:11,533 | INFO     |  -- lfn=log.45006595._046615.job.log.tgz.1, status_code=0, status=transferred
[2025-06-07 02:30:35] 2025-06-07 00:30:11,533 | INFO     | stage-out finished correctly
[2025-06-07 02:30:35] 2025-06-07 00:30:12,267 | WARNING  | process 670606 can no longer be monitored (due to stat problems) - aborting
[2025-06-07 02:30:35] 2025-06-07 00:30:12,267 | INFO     | using path: /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6678150116/memory_monitor_summary.json (trf name=prmon)
[2025-06-07 02:30:35] 2025-06-07 00:30:12,493 | INFO     | number of running child processes to parent process 670606: 1
[2025-06-07 02:30:35] 2025-06-07 00:30:12,493 | INFO     | maximum number of monitored processes: 6
[2025-06-07 02:30:35] 2025-06-07 00:30:14,122 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-07 02:30:35] 2025-06-07 00:30:14,996 | INFO     | monitor loop #346: job 0:6678150116 is in state 'finished'
[2025-06-07 02:30:35] 2025-06-07 00:30:14,996 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-07 02:30:35] 2025-06-07 00:30:15,980 | INFO     | job 6678150116 has state=finished
[2025-06-07 02:30:35] 2025-06-07 00:30:15,981 | INFO     | preparing for final server update for job 6678150116 in state='finished'
[2025-06-07 02:30:35] 2025-06-07 00:30:16,522 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-07 02:30:35] 2025-06-07 00:30:16,523 | INFO     | this job has now completed (state=finished)
[2025-06-07 02:30:35] 2025-06-07 00:30:16,523 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-07 02:30:35] 2025-06-07 00:30:16,523 | INFO     | log transfer has been attempted: DONE
[2025-06-07 02:30:35] 2025-06-07 00:30:16,523 | INFO     | job 6678150116 has finished - writing final server update
[2025-06-07 02:30:35] 2025-06-07 00:30:16,523 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_629190/.job.ad'
[2025-06-07 02:30:35] 2025-06-07 00:30:16,523 | INFO     | total number of processed events: 400 (read)
[2025-06-07 02:30:35] 2025-06-07 00:30:16,529 | INFO     | executing command: lscpu
[2025-06-07 02:30:35] 2025-06-07 00:30:16,598 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-07 02:30:35] 2025-06-07 00:30:17,499 | INFO     | monitor loop #347: job 0:6678150116 is in state 'finished'
[2025-06-07 02:30:35] 2025-06-07 00:30:17,500 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-07 02:30:35] 2025-06-07 00:30:20,003 | INFO     | monitor loop #348: job 0:6678150116 is in state 'finished'
[2025-06-07 02:30:35] 2025-06-07 00:30:20,003 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-07 02:30:35] 2025-06-07 00:30:20,666 | INFO     | PID=663264 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-07 02:30:35] 2025-06-07 00:30:21,215 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-07 02:30:35] 2025-06-07 00:30:21,215 | INFO     | using path: /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-6678150116/memory_monitor_summary.json (trf name=prmon)
[2025-06-07 02:30:35] 2025-06-07 00:30:21,216 | INFO     | extracted standard info from prmon json
[2025-06-07 02:30:35] 2025-06-07 00:30:21,216 | INFO     | extracted standard memory fields from prmon json
[2025-06-07 02:30:35] 2025-06-07 00:30:21,216 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-07 02:30:35] 2025-06-07 00:30:21,216 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-07 02:30:35] 2025-06-07 00:30:21,216 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-07 02:30:35] 2025-06-07 00:30:21,217 | INFO     | fitting pss+swap vs Time
[2025-06-07 02:30:35] 2025-06-07 00:30:21,218 | INFO     | sum of square deviations: 101843770.0
[2025-06-07 02:30:35] 2025-06-07 00:30:21,218 | INFO     | sum of deviations: 1347551000.0
[2025-06-07 02:30:35] 2025-06-07 00:30:21,218 | INFO     | mean x: 1749253990.0
[2025-06-07 02:30:35] 2025-06-07 00:30:21,218 | INFO     | mean y: 2379089.1014492754
[2025-06-07 02:30:35] 2025-06-07 00:30:21,218 | INFO     | -- intersect: -23142963659.68417
[2025-06-07 02:30:35] 2025-06-07 00:30:21,218 | INFO     | intersect: -23142963659.68417
[2025-06-07 02:30:35] 2025-06-07 00:30:21,218 | INFO     | chi2: 0.003645488330758812
[2025-06-07 02:30:35] 2025-06-07 00:30:21,218 | INFO     | -- intersect: -23142963659.68417
[2025-06-07 02:30:35] 2025-06-07 00:30:21,218 | INFO     | current memory leak: 13.23 B/s (using 69 data points, chi2=0.00)
[2025-06-07 02:30:35] 2025-06-07 00:30:21,219 | INFO     | ..............................
[2025-06-07 02:30:35] 2025-06-07 00:30:21,219 | INFO     | . Timing measurements:
[2025-06-07 02:30:35] 2025-06-07 00:30:21,219 | INFO     | . get job = 0 s
[2025-06-07 02:30:35] 2025-06-07 00:30:21,219 | INFO     | . initial setup = 1 s
[2025-06-07 02:30:35] 2025-06-07 00:30:21,219 | INFO     | . payload setup = 5 s
[2025-06-07 02:30:35] 2025-06-07 00:30:21,219 | INFO     | . stage-in = 0 s
[2025-06-07 02:30:35] 2025-06-07 00:30:21,219 | INFO     | . payload execution = 4599 s
[2025-06-07 02:30:35] 2025-06-07 00:30:21,219 | INFO     | . stage-out = 0 s
[2025-06-07 02:30:35] 2025-06-07 00:30:21,219 | INFO     | . log creation = 0 s
[2025-06-07 02:30:35] 2025-06-07 00:30:21,219 | INFO     | ..............................
[2025-06-07 02:30:35] 2025-06-07 00:30:21,276 | INFO     | 
[2025-06-07 02:30:35] 2025-06-07 00:30:21,277 | INFO     | job summary report
[2025-06-07 02:30:35] 2025-06-07 00:30:21,277 | INFO     | --------------------------------------------------
[2025-06-07 02:30:35] 2025-06-07 00:30:21,277 | INFO     | PanDA job id: 6678150116
[2025-06-07 02:30:35] 2025-06-07 00:30:21,277 | INFO     | task id: 45006595
[2025-06-07 02:30:35] 2025-06-07 00:30:21,277 | INFO     | errors: (none)
[2025-06-07 02:30:35] 2025-06-07 00:30:21,277 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-07 02:30:35] 2025-06-07 00:30:21,277 | INFO     | pilot state: finished 
[2025-06-07 02:30:35] 2025-06-07 00:30:21,277 | INFO     | transexitcode: 0
[2025-06-07 02:30:35] 2025-06-07 00:30:21,277 | INFO     | exeerrorcode: 0
[2025-06-07 02:30:35] 2025-06-07 00:30:21,277 | INFO     | exeerrordiag: 
[2025-06-07 02:30:35] 2025-06-07 00:30:21,277 | INFO     | exitcode: 0
[2025-06-07 02:30:35] 2025-06-07 00:30:21,277 | INFO     | exitmsg: OK
[2025-06-07 02:30:35] 2025-06-07 00:30:21,277 | INFO     | cpuconsumptiontime: 17326 s
[2025-06-07 02:30:35] 2025-06-07 00:30:21,277 | INFO     | nevents: 400
[2025-06-07 02:30:35] 2025-06-07 00:30:21,277 | INFO     | neventsw: 0
[2025-06-07 02:30:35] 2025-06-07 00:30:21,277 | INFO     | pid: 670606
[2025-06-07 02:30:35] 2025-06-07 00:30:21,277 | INFO     | pgrp: 670606
[2025-06-07 02:30:35] 2025-06-07 00:30:21,277 | INFO     | corecount: 4
[2025-06-07 02:30:35] 2025-06-07 00:30:21,277 | INFO     | event service: False
[2025-06-07 02:30:35] 2025-06-07 00:30:21,277 | INFO     | sizes: {0: 2397353, 4: 2397559, 11: 2397587, 4607: 2423741, 4608: 2423740, 4610: 2432759, 4612: 2432943, 4619: 2433113}
[2025-06-07 02:30:35] 2025-06-07 00:30:21,278 | INFO     | --------------------------------------------------
[2025-06-07 02:30:35] 2025-06-07 00:30:21,278 | INFO     | 
[2025-06-07 02:30:35] 2025-06-07 00:30:21,278 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2025-06-07 02:30:35] 2025-06-07 00:30:21,297 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-07 02:30:35] 2025-06-07 00:30:21,297 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-07 02:30:35] 2025-06-07 00:30:21,297 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-07 02:30:35] 2025-06-07 00:30:21,297 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-07 02:30:35] 2025-06-07 00:30:21,297 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-07 02:30:35] 2025-06-07 00:30:21,297 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-07 02:30:35] 2025-06-07 00:30:21,297 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-07 02:30:35] 2025-06-07 00:30:21,297 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-07 02:30:35] 2025-06-07 00:30:21,298 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-07 02:30:35] 2025-06-07 00:30:21,298 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-07 02:30:35] 2025-06-07 00:30:21,298 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-07 02:30:35] 2025-06-07 00:30:21,298 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-07 02:30:35] 2025-06-07 00:30:21,298 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-07 02:30:35] 2025-06-07 00:30:21,298 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-07 02:30:35] 2025-06-07 00:30:21,298 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-07 02:30:35] 2025-06-07 00:30:21,298 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-07 02:30:35] 2025-06-07 00:30:21,298 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-07 02:30:35] 2025-06-07 00:30:21,298 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-07 02:30:35] 2025-06-07 00:30:21,298 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-07 02:30:35] 2025-06-07 00:30:21,298 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-07 02:30:35] 2025-06-07 00:30:21,298 | INFO     | job 6678150116 has completed (purged errors)
[2025-06-07 02:30:35] 2025-06-07 00:30:21,298 | INFO     | overall cleanup function is called
[2025-06-07 02:30:35] 2025-06-07 00:30:22,306 | INFO     | --- collectZombieJob: --- 10, [670606]
[2025-06-07 02:30:35] 2025-06-07 00:30:22,306 | INFO     | zombie collector waiting for pid 670606
[2025-06-07 02:30:35] 2025-06-07 00:30:22,306 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-07 02:30:35] 2025-06-07 00:30:22,306 | INFO     | collected zombie processes
[2025-06-07 02:30:35] 2025-06-07 00:30:22,306 | INFO     | will attempt to kill all subprocesses of pid=670606
[2025-06-07 02:30:35] 2025-06-07 00:30:22,541 | INFO     | process IDs to be killed: [670606] (in reverse order)
[2025-06-07 02:30:35] 2025-06-07 00:30:22,627 | WARNING  | found no corresponding commands to process id(s)
[2025-06-07 02:30:35] 2025-06-07 00:30:22,627 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-07 02:30:35] 2025-06-07 00:30:22,637 | INFO     | did not find any defunct processes belonging to 670606
[2025-06-07 02:30:35] 2025-06-07 00:30:22,645 | INFO     | did not find any defunct processes belonging to 670606
[2025-06-07 02:30:35] 2025-06-07 00:30:22,645 | INFO     | ready for new job
[2025-06-07 02:30:35] 2025-06-07 00:30:22,645 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-07 02:30:35] 2025-06-07 00:30:22,646 | INFO     | **************************************
[2025-06-07 02:30:35] 2025-06-07 00:30:22,647 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-07 02:30:35] 2025-06-07 00:30:22,647 | INFO     | **************************************
[2025-06-07 02:30:35] 2025-06-07 00:30:22,647 | INFO     | 
[2025-06-07 02:30:35] 2025-06-07 00:30:22,652 | INFO     | architecture information:
[2025-06-07 02:30:35] 2025-06-07 00:30:22,653 | INFO     | executing command: cat /etc/os-release
[2025-06-07 02:30:35] 2025-06-07 00:30:22,668 | INFO     | cat /etc/os-release:
[2025-06-07 02:30:35] NAME="CentOS Linux"
[2025-06-07 02:30:35] VERSION="7 (Core)"
[2025-06-07 02:30:35] ID="centos"
[2025-06-07 02:30:35] ID_LIKE="rhel fedora"
[2025-06-07 02:30:35] VERSION_ID="7"
[2025-06-07 02:30:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-07 02:30:35] ANSI_COLOR="0;31"
[2025-06-07 02:30:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-07 02:30:35] HOME_URL="https://www.centos.org/"
[2025-06-07 02:30:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-07 02:30:35] 
[2025-06-07 02:30:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-07 02:30:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-07 02:30:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-07 02:30:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-07 02:30:35] 
[2025-06-07 02:30:35] 2025-06-07 00:30:22,668 | INFO     | **************************************
[2025-06-07 02:30:35] 2025-06-07 00:30:23,171 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2025-06-07 02:30:35] 2025-06-07 00:30:23,185 | INFO     | sufficient remaining disk space (3404117049344 B)
[2025-06-07 02:30:35] 2025-06-07 00:30:23,185 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-07 02:30:35] 2025-06-07 00:30:23,186 | INFO     | current server update state: UPDATING_FINAL
[2025-06-07 02:30:35] 2025-06-07 00:30:23,186 | INFO     | update_server=False
[2025-06-07 02:30:35] 2025-06-07 00:30:23,186 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-07 02:30:35] 2025-06-07 00:30:23,186 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-07 02:30:35] 2025-06-07 00:30:23,186 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-07 02:30:35] 2025-06-07 00:30:23,187 | INFO     | found 0 job(s) in 20 queues
[2025-06-07 02:30:35] 2025-06-07 00:30:23,187 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-07 02:30:35] 2025-06-07 00:30:23,187 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-07 02:30:35] 2025-06-07 00:30:23,394 | INFO     | all payload control threads have been joined
[2025-06-07 02:30:35] 2025-06-07 00:30:23,461 | INFO     | all data control threads have been joined
[2025-06-07 02:30:35] 2025-06-07 00:30:23,511 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-07 02:30:35] 2025-06-07 00:30:23,512 | INFO     | aborting loop
[2025-06-07 02:30:35] 2025-06-07 00:30:24,132 | INFO     | all job control threads have been joined
[2025-06-07 02:30:35] 2025-06-07 00:30:24,191 | INFO     | [job] retrieve thread has finished
[2025-06-07 02:30:35] 2025-06-07 00:30:24,192 | INFO     | [job] queue monitor thread has finished
[2025-06-07 02:30:35] 2025-06-07 00:30:24,372 | INFO     | [job] create_data_payload thread has finished
[2025-06-07 02:30:35] 2025-06-07 00:30:24,399 | INFO     | [payload] control thread has finished
[2025-06-07 02:30:35] 2025-06-07 00:30:24,467 | INFO     | [data] control thread has finished
[2025-06-07 02:30:35] 2025-06-07 00:30:24,517 | INFO     | [job] job monitor thread has finished
[2025-06-07 02:30:35] 2025-06-07 00:30:24,580 | INFO     | [payload] validate_pre thread has finished
[2025-06-07 02:30:35] 2025-06-07 00:30:24,595 | INFO     | [payload] failed_post thread has finished
[2025-06-07 02:30:35] 2025-06-07 00:30:24,605 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-07 02:30:35] 2025-06-07 00:30:24,629 | INFO     | [job] validate thread has finished
[2025-06-07 02:30:35] 2025-06-07 00:30:24,688 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-07 02:30:35] 2025-06-07 00:30:24,976 | INFO     | [payload] validate_post thread has finished
[2025-06-07 02:30:35] 2025-06-07 00:30:25,138 | INFO     | [job] control thread has finished
[2025-06-07 02:30:35] 2025-06-07 00:30:25,237 | INFO     | [data] copytool_in thread has finished
[2025-06-07 02:30:35] 2025-06-07 00:30:25,300 | INFO     | [payload] execute_payloads thread has finished
[2025-06-07 02:30:35] 2025-06-07 00:30:25,640 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-07 02:30:35] 2025-06-07 00:30:26,610 | INFO     | [data] copytool_out thread has finished
[2025-06-07 02:30:35] 2025-06-07 00:30:28,694 | INFO     | [data] queue_monitor thread has finished
[2025-06-07 02:30:35] 2025-06-07 00:30:30,464 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22390188545856)>', '<ExcThread(monitor, started 22389947590400)>']
[2025-06-07 02:30:35] 2025-06-07 00:30:31,227 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-07 02:30:35] 2025-06-07 00:30:31,227 | INFO     | [monitor] control thread has ended
[2025-06-07 02:30:35] 2025-06-07 00:30:35,489 | INFO     | all workflow threads have been joined
[2025-06-07 02:30:35] 2025-06-07 00:30:35,489 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-07 02:30:35] 2025-06-07 00:30:35,490 | INFO     | traces error code: 0
[2025-06-07 02:30:35] 2025-06-07 00:30:35,490 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-07 02:30:35] 2025-06-07 00:30:35,589 [wrapper] ==== pilot stdout END ====
[2025-06-07 02:30:35] 2025-06-07 00:30:35,592 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-07 02:30:35] 2025-06-07 00:30:35,595 [wrapper] pilotpid: 663264
[2025-06-07 02:30:35] 2025-06-07 00:30:35,598 [wrapper] Pilot exit status: 0
[2025-06-07 02:30:35] 2025-06-07 00:30:35,609 [wrapper] pandaids: 6678150116
[2025-06-07 02:30:35] 2025-06-07 00:30:35,671 [wrapper] cleanup supervisor_pilot  714176 663265
[2025-06-07 02:30:35] 2025-06-07 00:30:35,673 [wrapper] Test setup, not cleaning
[2025-06-07 02:30:35] 2025-06-07 00:30:35,676 [wrapper] apfmon messages muted
[2025-06-07 02:30:35] 2025-06-07 00:30:35,679 [wrapper] ==== wrapper stdout END ====
[2025-06-07 02:30:35] 2025-06-07 00:30:35,681 [wrapper] ==== wrapper stderr END ====
[2025-06-07 02:30:35]  *** Error codes and diagnostics ***
[2025-06-07 02:30:35]     "exeErrorCode": 0,
[2025-06-07 02:30:35]     "exeErrorDiag": "",
[2025-06-07 02:30:35]     "pilotErrorCode": 0,
[2025-06-07 02:30:35]     "pilotErrorDiag": "",
[2025-06-07 02:30:35]  *** Listing of results directory ***
[2025-06-07 02:30:35] total 388440
[2025-06-07 02:30:35] -rw-r--r-- 1 boinc boinc    495897 Jun  3 23:41 pilot3.tar.gz
[2025-06-07 02:30:35] -rw-r--r-- 1 boinc boinc      5111 Jun  3 23:50 queuedata.json
[2025-06-07 02:30:35] -rwx------ 1 boinc boinc     37140 Jun  3 23:51 runpilot2-wrapper.sh
[2025-06-07 02:30:35] -rw-r--r-- 1 boinc boinc       100 Jun  7 01:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-07 02:30:35] -rwxr-xr-x 1 boinc boinc      7986 Jun  7 01:10 run_atlas
[2025-06-07 02:30:35] -rw-r--r-- 1 boinc boinc       105 Jun  7 01:10 job.xml
[2025-06-07 02:30:35] -rw-r--r-- 1 boinc boinc      6684 Jun  7 01:12 init_data.xml
[2025-06-07 02:30:35] -rw-r--r-- 2 boinc boinc 215606941 Jun  7 01:12 EVNT.45006593._001868.pool.root.1
[2025-06-07 02:30:35] -rw-r--r-- 2 boinc boinc     15093 Jun  7 01:12 start_atlas.sh
[2025-06-07 02:30:35] drwxrwx--x 2 boinc boinc      4096 Jun  7 01:12 shared
[2025-06-07 02:30:35] -rw-r--r-- 2 boinc boinc    508879 Jun  7 01:12 input.tar.gz
[2025-06-07 02:30:35] -rw-r--r-- 1 boinc boinc         0 Jun  7 01:12 boinc_lockfile
[2025-06-07 02:30:35] -rw-r--r-- 1 boinc boinc      2525 Jun  7 01:12 pandaJob.out
[2025-06-07 02:30:35] -rw------- 1 boinc boinc    985748 Jun  7 01:13 agis_schedconf.cvmfs.json
[2025-06-07 02:30:35] -rw------- 1 boinc boinc   1598969 Jun  7 01:13 agis_ddmendpoints.agis.ALL.json
[2025-06-07 02:30:35] drwx------ 4 boinc boinc      4096 Jun  7 01:13 pilot3
[2025-06-07 02:30:35] -rw------- 1 boinc boinc        95 Jun  7 02:29 pilot_heartbeat.json
[2025-06-07 02:30:35] -rw------- 1 boinc boinc 176948414 Jun  7 02:29 HITS.45006595._046615.pool.root.1
[2025-06-07 02:30:35] -rw-r--r-- 1 boinc boinc       529 Jun  7 02:30 boinc_task_state.xml
[2025-06-07 02:30:35] -rw------- 1 boinc boinc      1012 Jun  7 02:30 memory_monitor_summary.json
[2025-06-07 02:30:35] -rw------- 1 boinc boinc    234603 Jun  7 02:30 log.45006595._046615.job.log.tgz.1
[2025-06-07 02:30:35] -rw------- 1 boinc boinc      7682 Jun  7 02:30 heartbeat.json
[2025-06-07 02:30:35] -rw-r--r-- 1 boinc boinc      8192 Jun  7 02:30 boinc_mmap_file
[2025-06-07 02:30:35] -rw-r--r-- 1 boinc boinc        27 Jun  7 02:30 wrapper_checkpoint.txt
[2025-06-07 02:30:35] -rw------- 1 boinc boinc      4487 Jun  7 02:30 pilotlog.txt
[2025-06-07 02:30:35] -rw------- 1 boinc boinc    453793 Jun  7 02:30 log.45006595._046615.job.log.1
[2025-06-07 02:30:35] -rw------- 1 boinc boinc       357 Jun  7 02:30 output.list
[2025-06-07 02:30:35] -rw-r--r-- 1 boinc boinc       620 Jun  7 02:30 runtime_log
[2025-06-07 02:30:35] -rw------- 1 boinc boinc    706560 Jun  7 02:30 result.tar.gz
[2025-06-07 02:30:35] -rw------- 1 boinc boinc       660 Jun  7 02:30 wI3MDmBjog7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsImKDmfn8Kwm.diag
[2025-06-07 02:30:35] -rw-r--r-- 1 boinc boinc      9025 Jun  7 02:30 runtime_log.err
[2025-06-07 02:30:35] -rw-r--r-- 1 boinc boinc     21830 Jun  7 02:30 stderr.txt
[2025-06-07 02:30:35] HITS file was successfully produced:
[2025-06-07 02:30:35] -rw------- 1 boinc boinc 176948414 Jun  7 02:29 shared/HITS.pool.root.1
[2025-06-07 02:30:35]  *** Contents of shared directory: ***
[2025-06-07 02:30:35] total 384572
[2025-06-07 02:30:35] -rw-r--r-- 2 boinc boinc 215606941 Jun  7 01:12 ATLAS.root_0
[2025-06-07 02:30:35] -rw-r--r-- 2 boinc boinc     15093 Jun  7 01:12 start_atlas.sh
[2025-06-07 02:30:35] -rw-r--r-- 2 boinc boinc    508879 Jun  7 01:12 input.tar.gz
[2025-06-07 02:30:35] -rw------- 1 boinc boinc 176948414 Jun  7 02:29 HITS.pool.root.1
[2025-06-07 02:30:35] -rw------- 1 boinc boinc    706560 Jun  7 02:30 result.tar.gz
02:30:36 (659324): run_atlas exited; CPU time 17407.193551
02:30:36 (659324): called boinc_finish(0)

</stderr_txt>
]]>

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