Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:13:18 (260075): wrapper (7.7.26015): starting
09:13:18 (260075): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 09:13:18] Arguments: --nthreads 12
[2025-06-04 09:13:18] Threads: 12
[2025-06-04 09:13:18] Checking for CVMFS
[2025-06-04 09:13:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 09:13:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 09:13:18] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 09:13:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 09:13:18] 2.12.7.0 3387806 2136 86720 146771 2 56 3081197 4097024 0 130560 0 2396754 99.993 521846 6456 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-06-04 09:13:18] CVMFS is ok
[2025-06-04 09:13:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 09:13:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 09:13:18] Further information can be found at the LHC@home message board.
[2025-06-04 09:13:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 09:13:18] Checking for apptainer binary...
[2025-06-04 09:13:18] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-06-04 09:13:18] apptainer is not installed, using version from CVMFS
[2025-06-04 09:13:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 09:13:19] pckelar5.cern.ch
[2025-06-04 09:13:19] apptainer works
[2025-06-04 09:13:19] Set ATHENA_PROC_NUMBER=12
[2025-06-04 09:13:19] Set ATHENA_CORE_NUMBER=12
[2025-06-04 09:13:19] Starting ATLAS job with PandaID=6678074776
[2025-06-04 09:13:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 10:14:00]  *** The last 200 lines of the pilot log: ***
[2025-06-04 10:14:00]  replicas=None
[2025-06-04 10:14:00]  scope=mc23_13p6TeV
[2025-06-04 10:14:00]  status=None
[2025-06-04 10:14:00]  status_code=0
[2025-06-04 10:14:00]  storage_token=
[2025-06-04 10:14:00]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6678074776/log.45006595._046063.job.log.tgz.1
[2025-06-04 10:14:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/95/59/log.45006595._046063.job.log.tgz.1
[2025-06-04 10:14:00]  workdir=None
[2025-06-04 10:14:00] ]
[2025-06-04 10:14:00] 2025-06-04 08:13:32,642 | INFO     | transferring file log.45006595._046063.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6678074776/log.45006595._046063.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 10:14:00] 2025-06-04 08:13:32,642 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6678074776/log.45006595._046063.job.log.tgz.1 /var/lib/boinc/slots/0/log.45006595._046063.job
[2025-06-04 10:14:00] 2025-06-04 08:13:32,658 | INFO     | adding to output.list: log.45006595._046063.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/95/59/log.45006595._046063.job.log.tg
[2025-06-04 10:14:00] 2025-06-04 08:13:32,658 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 10:14:00] 2025-06-04 08:13:32,658 | INFO     | summary of transferred files:
[2025-06-04 10:14:00] 2025-06-04 08:13:32,659 | INFO     |  -- lfn=log.45006595._046063.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 10:14:00] 2025-06-04 08:13:32,659 | INFO     | stage-out finished correctly
[2025-06-04 10:14:00] 2025-06-04 08:13:32,791 | WARNING  | process 270864 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 10:14:00] 2025-06-04 08:13:32,792 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6678074776/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:14:00] 2025-06-04 08:13:32,864 | INFO     | number of running child processes to parent process 270864: 1
[2025-06-04 10:14:00] 2025-06-04 08:13:32,864 | INFO     | maximum number of monitored processes: 6
[2025-06-04 10:14:00] 2025-06-04 08:13:34,312 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 10:14:00] 2025-06-04 08:13:35,367 | INFO     | monitor loop #271: job 0:6678074776 is in state 'finished'
[2025-06-04 10:14:00] 2025-06-04 08:13:35,367 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:14:00] 2025-06-04 08:13:35,863 | INFO     | PID=263751 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 10:14:00] 2025-06-04 08:13:36,716 | INFO     | job 6678074776 has state=finished
[2025-06-04 10:14:00] 2025-06-04 08:13:36,716 | INFO     | preparing for final server update for job 6678074776 in state='finished'
[2025-06-04 10:14:00] 2025-06-04 08:13:36,716 | INFO     | this job has now completed (state=finished)
[2025-06-04 10:14:00] 2025-06-04 08:13:36,716 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 10:14:00] 2025-06-04 08:13:36,717 | INFO     | log transfer has been attempted: DONE
[2025-06-04 10:14:00] 2025-06-04 08:13:36,717 | INFO     | job 6678074776 has finished - writing final server update
[2025-06-04 10:14:00] 2025-06-04 08:13:36,717 | INFO     | total number of processed events: 400 (read)
[2025-06-04 10:14:00] 2025-06-04 08:13:36,719 | INFO     | executing command: lscpu
[2025-06-04 10:14:00] 2025-06-04 08:13:36,738 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 10:14:00] 2025-06-04 08:13:37,870 | INFO     | monitor loop #272: job 0:6678074776 is in state 'finished'
[2025-06-04 10:14:00] 2025-06-04 08:13:37,870 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:14:00] 2025-06-04 08:13:40,373 | INFO     | monitor loop #273: job 0:6678074776 is in state 'finished'
[2025-06-04 10:14:00] 2025-06-04 08:13:40,373 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 10:14:00] 2025-06-04 08:13:40,594 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 10:14:00] 2025-06-04 08:13:40,594 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6678074776/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 10:14:00] 2025-06-04 08:13:40,595 | INFO     | extracted standard info from prmon json
[2025-06-04 10:14:00] 2025-06-04 08:13:40,595 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 10:14:00] 2025-06-04 08:13:40,595 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 10:14:00] 2025-06-04 08:13:40,595 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 10:14:00] 2025-06-04 08:13:40,595 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 10:14:00] 2025-06-04 08:13:40,597 | INFO     | fitting pss+swap vs Time
[2025-06-04 10:14:00] 2025-06-04 08:13:40,597 | INFO     | sum of square deviations: 43584073.0
[2025-06-04 10:14:00] 2025-06-04 08:13:40,597 | INFO     | sum of deviations: 756188421.5
[2025-06-04 10:14:00] 2025-06-04 08:13:40,597 | INFO     | mean x: 1749023088.5
[2025-06-04 10:14:00] 2025-06-04 08:13:40,597 | INFO     | mean y: 2866549.8653846155
[2025-06-04 10:14:00] 2025-06-04 08:13:40,597 | INFO     | -- intersect: -30342874851.124603
[2025-06-04 10:14:00] 2025-06-04 08:13:40,597 | INFO     | intersect: -30342874851.124603
[2025-06-04 10:14:00] 2025-06-04 08:13:40,598 | INFO     | chi2: 0.000517740876502721
[2025-06-04 10:14:00] 2025-06-04 08:13:40,598 | INFO     | -- intersect: -30342874851.124603
[2025-06-04 10:14:00] 2025-06-04 08:13:40,598 | INFO     | current memory leak: 17.35 B/s (using 52 data points, chi2=0.00)
[2025-06-04 10:14:00] 2025-06-04 08:13:40,598 | INFO     | ..............................
[2025-06-04 10:14:00] 2025-06-04 08:13:40,598 | INFO     | . Timing measurements:
[2025-06-04 10:14:00] 2025-06-04 08:13:40,598 | INFO     | . get job = 0 s
[2025-06-04 10:14:00] 2025-06-04 08:13:40,598 | INFO     | . initial setup = 1 s
[2025-06-04 10:14:00] 2025-06-04 08:13:40,598 | INFO     | . payload setup = 5 s
[2025-06-04 10:14:00] 2025-06-04 08:13:40,599 | INFO     | . stage-in = 0 s
[2025-06-04 10:14:00] 2025-06-04 08:13:40,599 | INFO     | . payload execution = 3583 s
[2025-06-04 10:14:00] 2025-06-04 08:13:40,599 | INFO     | . stage-out = 0 s
[2025-06-04 10:14:00] 2025-06-04 08:13:40,599 | INFO     | . log creation = 0 s
[2025-06-04 10:14:00] 2025-06-04 08:13:40,599 | INFO     | ..............................
[2025-06-04 10:14:00] 2025-06-04 08:13:40,915 | INFO     | 
[2025-06-04 10:14:00] 2025-06-04 08:13:40,916 | INFO     | job summary report
[2025-06-04 10:14:00] 2025-06-04 08:13:40,916 | INFO     | --------------------------------------------------
[2025-06-04 10:14:00] 2025-06-04 08:13:40,916 | INFO     | PanDA job id: 6678074776
[2025-06-04 10:14:00] 2025-06-04 08:13:40,916 | INFO     | task id: 45006595
[2025-06-04 10:14:00] 2025-06-04 08:13:40,916 | INFO     | errors: (none)
[2025-06-04 10:14:00] 2025-06-04 08:13:40,916 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 10:14:00] 2025-06-04 08:13:40,916 | INFO     | pilot state: finished 
[2025-06-04 10:14:00] 2025-06-04 08:13:40,916 | INFO     | transexitcode: 0
[2025-06-04 10:14:00] 2025-06-04 08:13:40,916 | INFO     | exeerrorcode: 0
[2025-06-04 10:14:00] 2025-06-04 08:13:40,917 | INFO     | exeerrordiag: 
[2025-06-04 10:14:00] 2025-06-04 08:13:40,917 | INFO     | exitcode: 0
[2025-06-04 10:14:00] 2025-06-04 08:13:40,917 | INFO     | exitmsg: OK
[2025-06-04 10:14:00] 2025-06-04 08:13:40,917 | INFO     | cpuconsumptiontime: 38614 s
[2025-06-04 10:14:00] 2025-06-04 08:13:40,917 | INFO     | nevents: 400
[2025-06-04 10:14:00] 2025-06-04 08:13:40,917 | INFO     | neventsw: 0
[2025-06-04 10:14:00] 2025-06-04 08:13:40,917 | INFO     | pid: 270864
[2025-06-04 10:14:00] 2025-06-04 08:13:40,917 | INFO     | pgrp: 270864
[2025-06-04 10:14:00] 2025-06-04 08:13:40,917 | INFO     | corecount: 12
[2025-06-04 10:14:00] 2025-06-04 08:13:40,917 | INFO     | event service: False
[2025-06-04 10:14:00] 2025-06-04 08:13:40,917 | INFO     | sizes: {0: 2404955, 1: 2405210, 4: 2405416, 12: 2405444, 3592: 2431088, 3593: 2440029, 3595: 2440213, 3601: 2440383}
[2025-06-04 10:14:00] 2025-06-04 08:13:40,917 | INFO     | --------------------------------------------------
[2025-06-04 10:14:00] 2025-06-04 08:13:40,917 | INFO     | 
[2025-06-04 10:14:00] 2025-06-04 08:13:40,918 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-06-04 10:14:00] 2025-06-04 08:13:40,936 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 10:14:00] 2025-06-04 08:13:40,936 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 10:14:00] 2025-06-04 08:13:40,936 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 10:14:00] 2025-06-04 08:13:40,936 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 10:14:00] 2025-06-04 08:13:40,936 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 10:14:00] 2025-06-04 08:13:40,936 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 10:14:00] 2025-06-04 08:13:40,936 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 10:14:00] 2025-06-04 08:13:40,937 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 10:14:00] 2025-06-04 08:13:40,937 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 10:14:00] 2025-06-04 08:13:40,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 10:14:00] 2025-06-04 08:13:40,937 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 10:14:00] 2025-06-04 08:13:40,937 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 10:14:00] 2025-06-04 08:13:40,937 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 10:14:00] 2025-06-04 08:13:40,937 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 10:14:00] 2025-06-04 08:13:40,937 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 10:14:00] 2025-06-04 08:13:40,937 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 10:14:00] 2025-06-04 08:13:40,937 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 10:14:00] 2025-06-04 08:13:40,937 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 10:14:00] 2025-06-04 08:13:40,938 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 10:14:00] 2025-06-04 08:13:40,938 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 10:14:00] 2025-06-04 08:13:40,938 | INFO     | job 6678074776 has completed (purged errors)
[2025-06-04 10:14:00] 2025-06-04 08:13:40,938 | INFO     | overall cleanup function is called
[2025-06-04 10:14:00] 2025-06-04 08:13:41,945 | INFO     | --- collectZombieJob: --- 10, [270864]
[2025-06-04 10:14:00] 2025-06-04 08:13:41,945 | INFO     | zombie collector waiting for pid 270864
[2025-06-04 10:14:00] 2025-06-04 08:13:41,945 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 10:14:00] 2025-06-04 08:13:41,945 | INFO     | collected zombie processes
[2025-06-04 10:14:00] 2025-06-04 08:13:41,945 | INFO     | will attempt to kill all subprocesses of pid=270864
[2025-06-04 10:14:00] 2025-06-04 08:13:42,022 | INFO     | process IDs to be killed: [270864] (in reverse order)
[2025-06-04 10:14:00] 2025-06-04 08:13:42,057 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 10:14:00] 2025-06-04 08:13:42,058 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 10:14:00] 2025-06-04 08:13:42,060 | INFO     | did not find any defunct processes belonging to 270864
[2025-06-04 10:14:00] 2025-06-04 08:13:42,062 | INFO     | did not find any defunct processes belonging to 270864
[2025-06-04 10:14:00] 2025-06-04 08:13:42,062 | INFO     | ready for new job
[2025-06-04 10:14:00] 2025-06-04 08:13:42,062 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 10:14:00] 2025-06-04 08:13:42,063 | INFO     | **************************************
[2025-06-04 10:14:00] 2025-06-04 08:13:42,063 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 10:14:00] 2025-06-04 08:13:42,063 | INFO     | **************************************
[2025-06-04 10:14:00] 2025-06-04 08:13:42,063 | INFO     | 
[2025-06-04 10:14:00] 2025-06-04 08:13:42,064 | INFO     | architecture information:
[2025-06-04 10:14:00] 2025-06-04 08:13:42,064 | INFO     | executing command: cat /etc/os-release
[2025-06-04 10:14:00] 2025-06-04 08:13:42,074 | INFO     | cat /etc/os-release:
[2025-06-04 10:14:00] NAME="CentOS Linux"
[2025-06-04 10:14:00] VERSION="7 (Core)"
[2025-06-04 10:14:00] ID="centos"
[2025-06-04 10:14:00] ID_LIKE="rhel fedora"
[2025-06-04 10:14:00] VERSION_ID="7"
[2025-06-04 10:14:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 10:14:00] ANSI_COLOR="0;31"
[2025-06-04 10:14:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 10:14:00] HOME_URL="https://www.centos.org/"
[2025-06-04 10:14:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 10:14:00] 
[2025-06-04 10:14:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 10:14:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 10:14:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 10:14:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 10:14:00] 
[2025-06-04 10:14:00] 2025-06-04 08:13:42,074 | INFO     | **************************************
[2025-06-04 10:14:00] 2025-06-04 08:13:42,577 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-04 10:14:00] 2025-06-04 08:13:42,590 | INFO     | sufficient remaining disk space (1816444010496 B)
[2025-06-04 10:14:00] 2025-06-04 08:13:42,590 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 10:14:00] 2025-06-04 08:13:42,590 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 10:14:00] 2025-06-04 08:13:42,590 | INFO     | update_server=False
[2025-06-04 10:14:00] 2025-06-04 08:13:42,590 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 10:14:00] 2025-06-04 08:13:42,590 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:14:00] 2025-06-04 08:13:42,591 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 10:14:00] 2025-06-04 08:13:42,591 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 10:14:00] 2025-06-04 08:13:42,591 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 10:14:00] 2025-06-04 08:13:42,591 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 10:14:00] 2025-06-04 08:13:42,824 | INFO     | all data control threads have been joined
[2025-06-04 10:14:00] 2025-06-04 08:13:42,876 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 10:14:00] 2025-06-04 08:13:42,876 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 10:14:00] 2025-06-04 08:13:42,876 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 10:14:00] 2025-06-04 08:13:42,876 | INFO     | will abort loop
[2025-06-04 10:14:00] 2025-06-04 08:13:42,977 | INFO     | all payload control threads have been joined
[2025-06-04 10:14:00] 2025-06-04 08:13:43,240 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 10:14:00] 2025-06-04 08:13:43,591 | INFO     | [job] retrieve thread has finished
[2025-06-04 10:14:00] 2025-06-04 08:13:43,596 | INFO     | [job] queue monitor thread has finished
[2025-06-04 10:14:00] 2025-06-04 08:13:43,722 | INFO     | all job control threads have been joined
[2025-06-04 10:14:00] 2025-06-04 08:13:43,798 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 10:14:00] 2025-06-04 08:13:43,830 | INFO     | [data] control thread has finished
[2025-06-04 10:14:00] 2025-06-04 08:13:43,882 | INFO     | [job] job monitor thread has finished
[2025-06-04 10:14:00] 2025-06-04 08:13:43,983 | INFO     | [payload] control thread has finished
[2025-06-04 10:14:00] 2025-06-04 08:13:43,987 | INFO     | [payload] validate_post thread has finished
[2025-06-04 10:14:00] 2025-06-04 08:13:44,434 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 10:14:00] 2025-06-04 08:13:44,727 | INFO     | [job] control thread has finished
[2025-06-04 10:14:00] 2025-06-04 08:13:44,780 | INFO     | [job] validate thread has finished
[2025-06-04 10:14:00] 2025-06-04 08:13:44,887 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 10:14:00] 2025-06-04 08:13:44,947 | INFO     | [data] copytool_in thread has finished
[2025-06-04 10:14:00] 2025-06-04 08:13:45,064 | INFO     | [payload] failed_post thread has finished
[2025-06-04 10:14:00] 2025-06-04 08:13:45,066 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 10:14:00] 2025-06-04 08:13:45,246 | INFO     | [data] copytool_out thread has finished
[2025-06-04 10:14:00] 2025-06-04 08:13:48,893 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 10:14:00] 2025-06-04 08:13:53,186 | INFO     | job.realtimelogging is not enabled
[2025-06-04 10:14:00] 2025-06-04 08:13:54,191 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 10:14:00] 2025-06-04 08:13:55,430 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140636975097664)>', '<ExcThread(monitor, started 140635549988608)>']
[2025-06-04 10:14:00] 2025-06-04 08:13:55,657 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 10:14:00] 2025-06-04 08:13:55,657 | INFO     | [monitor] control thread has ended
[2025-06-04 10:14:00] 2025-06-04 08:14:00,455 | INFO     | all workflow threads have been joined
[2025-06-04 10:14:00] 2025-06-04 08:14:00,456 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 10:14:00] 2025-06-04 08:14:00,456 | INFO     | traces error code: 0
[2025-06-04 10:14:00] 2025-06-04 08:14:00,456 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 10:14:00] 2025-06-04 08:14:00,527 [wrapper] ==== pilot stdout END ====
[2025-06-04 10:14:00] 2025-06-04 08:14:00,530 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 10:14:00] 2025-06-04 08:14:00,532 [wrapper] pilotpid: 263751
[2025-06-04 10:14:00] 2025-06-04 08:14:00,534 [wrapper] Pilot exit status: 0
[2025-06-04 10:14:00] 2025-06-04 08:14:00,543 [wrapper] pandaids: 6678074776
[2025-06-04 10:14:00] 2025-06-04 08:14:00,561 [wrapper] cleanup supervisor_pilot  286918 263752
[2025-06-04 10:14:00] 2025-06-04 08:14:00,563 [wrapper] Test setup, not cleaning
[2025-06-04 10:14:00] 2025-06-04 08:14:00,565 [wrapper] apfmon messages muted
[2025-06-04 10:14:00] 2025-06-04 08:14:00,567 [wrapper] ==== wrapper stdout END ====
[2025-06-04 10:14:00] 2025-06-04 08:14:00,569 [wrapper] ==== wrapper stderr END ====
[2025-06-04 10:14:00]  *** Error codes and diagnostics ***
[2025-06-04 10:14:00]     "exeErrorCode": 0,
[2025-06-04 10:14:00]     "exeErrorDiag": "",
[2025-06-04 10:14:00]     "pilotErrorCode": 0,
[2025-06-04 10:14:00]     "pilotErrorDiag": "",
[2025-06-04 10:14:00]  *** Listing of results directory ***
[2025-06-04 10:14:00] total 386696
[2025-06-04 10:14:00] -rw-r--r-- 1 boinc boinc      5111 Jun  3 23:41 queuedata.json
[2025-06-04 10:14:00] -rw-r--r-- 1 boinc boinc    495897 Jun  3 23:41 pilot3.tar.gz
[2025-06-04 10:14:00] -rwx------ 1 boinc boinc     37140 Jun  3 23:42 runpilot2-wrapper.sh
[2025-06-04 10:14:00] -rw-r--r-- 1 boinc boinc       100 Jun  4 09:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 10:14:00] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 09:13 run_atlas
[2025-06-04 10:14:00] -rw-r--r-- 1 boinc boinc       105 Jun  4 09:13 job.xml
[2025-06-04 10:14:00] -rw-r--r-- 2 boinc boinc     15093 Jun  4 09:13 start_atlas.sh
[2025-06-04 10:14:00] drwxrwx--x 2 boinc boinc        68 Jun  4 09:13 shared
[2025-06-04 10:14:00] -rw-r--r-- 2 boinc boinc    508874 Jun  4 09:13 input.tar.gz
[2025-06-04 10:14:00] -rw-r--r-- 1 boinc boinc      6254 Jun  4 09:13 init_data.xml
[2025-06-04 10:14:00] -rw-r--r-- 2 boinc boinc 216509196 Jun  4 09:13 EVNT.45006593._001848.pool.root.1
[2025-06-04 10:14:00] -rw-r--r-- 1 boinc boinc         0 Jun  4 09:13 boinc_lockfile
[2025-06-04 10:14:00] -rw-r--r-- 1 boinc boinc      2524 Jun  4 09:13 pandaJob.out
[2025-06-04 10:14:00] -rw------- 1 boinc boinc    986745 Jun  4 09:13 agis_schedconf.cvmfs.json
[2025-06-04 10:14:00] -rw------- 1 boinc boinc   1603667 Jun  4 09:13 agis_ddmendpoints.agis.ALL.json
[2025-06-04 10:14:00] drwx------ 4 boinc boinc      4096 Jun  4 09:13 pilot3
[2025-06-04 10:14:00] -rw------- 1 boinc boinc 174253292 Jun  4 10:13 HITS.45006595._046063.pool.root.1
[2025-06-04 10:14:00] -rw-r--r-- 1 boinc boinc       529 Jun  4 10:13 boinc_task_state.xml
[2025-06-04 10:14:00] -rw------- 1 boinc boinc        95 Jun  4 10:13 pilot_heartbeat.json
[2025-06-04 10:14:00] -rw------- 1 boinc boinc      1020 Jun  4 10:13 memory_monitor_summary.json
[2025-06-04 10:14:00] -rw------- 1 boinc boinc    338644 Jun  4 10:13 log.45006595._046063.job.log.tgz.1
[2025-06-04 10:14:00] -rw-r--r-- 1 boinc boinc      8192 Jun  4 10:13 boinc_mmap_file
[2025-06-04 10:14:00] -rw-r--r-- 1 boinc boinc        27 Jun  4 10:13 wrapper_checkpoint.txt
[2025-06-04 10:14:00] -rw------- 1 boinc boinc      7685 Jun  4 10:13 heartbeat.json
[2025-06-04 10:14:00] -rw------- 1 boinc boinc      4736 Jun  4 10:14 pilotlog.txt
[2025-06-04 10:14:00] -rw------- 1 boinc boinc    355680 Jun  4 10:14 log.45006595._046063.job.log.1
[2025-06-04 10:14:00] -rw------- 1 boinc boinc       357 Jun  4 10:14 output.list
[2025-06-04 10:14:00] -rw-r--r-- 1 boinc boinc       620 Jun  4 10:14 runtime_log
[2025-06-04 10:14:00] -rw------- 1 boinc boinc    716800 Jun  4 10:14 result.tar.gz
[2025-06-04 10:14:00] -rw------- 1 boinc boinc       654 Jun  4 10:14 w3QLDmjZog7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6FmKDmpQdgan.diag
[2025-06-04 10:14:00] -rw-r--r-- 1 boinc boinc      8683 Jun  4 10:14 runtime_log.err
[2025-06-04 10:14:00] -rw-r--r-- 1 boinc boinc     21992 Jun  4 10:14 stderr.txt
[2025-06-04 10:14:00] HITS file was successfully produced:
[2025-06-04 10:14:00] -rw------- 1 boinc boinc 174253292 Jun  4 10:13 shared/HITS.pool.root.1
[2025-06-04 10:14:00]  *** Contents of shared directory: ***
[2025-06-04 10:14:00] total 382828
[2025-06-04 10:14:00] -rw-r--r-- 2 boinc boinc     15093 Jun  4 09:13 start_atlas.sh
[2025-06-04 10:14:00] -rw-r--r-- 2 boinc boinc    508874 Jun  4 09:13 input.tar.gz
[2025-06-04 10:14:00] -rw-r--r-- 2 boinc boinc 216509196 Jun  4 09:13 ATLAS.root_0
[2025-06-04 10:14:00] -rw------- 1 boinc boinc 174253292 Jun  4 10:13 HITS.pool.root.1
[2025-06-04 10:14:00] -rw------- 1 boinc boinc    716800 Jun  4 10:14 result.tar.gz
10:14:02 (260075): run_atlas exited; CPU time 38626.665844
10:14:02 (260075): called boinc_finish(0)

</stderr_txt>
]]>

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