Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:20:21 (963354): wrapper (7.7.26015): starting
19:20:21 (963354): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 19:20:21] Arguments: --nthreads 12
[2025-06-03 19:20:21] Threads: 12
[2025-06-03 19:20:21] Checking for CVMFS
[2025-06-03 19:20:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 19:20:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 19:20:22] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 19:20:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 19:20:22] 2.11.5.0 907026 10 54316 146764 1 185 24671883 45568001 0 130560 0 144992 99.999 1293 5597 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 19:20:22] CVMFS is ok
[2025-06-03 19:20:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 19:20:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 19:20:22] Further information can be found at the LHC@home message board.
[2025-06-03 19:20:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 19:20:22] Checking for apptainer binary...
[2025-06-03 19:20:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 19:20:22] Running /usr/bin/apptainer --version
[2025-06-03 19:20:22] apptainer version 1.4.0-1.el9
[2025-06-03 19:20:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 19:20:23] wns0059.triumf.lcg
[2025-06-03 19:20:23] apptainer works
[2025-06-03 19:20:23] Set ATHENA_PROC_NUMBER=12
[2025-06-03 19:20:23] Set ATHENA_CORE_NUMBER=12
[2025-06-03 19:20:23] Starting ATLAS job with PandaID=6678213723
[2025-06-03 19:20:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 19:23:52]  *** The last 200 lines of the pilot log: ***
[2025-06-03 19:23:52] 2025-06-04 02:23:39,174 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 19:23:52] 2025-06-04 02:23:39,174 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 19:23:52] 2025-06-04 02:23:39,175 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 19:23:52] 2025-06-04 02:23:39,175 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 19:23:52] 2025-06-04 02:23:39,176 | WARNING  | found no stored workdir sizes
[2025-06-03 19:23:52] 2025-06-04 02:23:39,176 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 19:23:52] 2025-06-04 02:23:39,177 | WARNING  | wrong length of table data, x=[1749003670.0], y=[2217.0] (must be same and length>=4)
[2025-06-03 19:23:52] 2025-06-04 02:23:39,177 | INFO     | ..............................
[2025-06-03 19:23:52] 2025-06-04 02:23:39,177 | INFO     | . Timing measurements:
[2025-06-03 19:23:52] 2025-06-04 02:23:39,178 | INFO     | . get job = 0 s
[2025-06-03 19:23:52] 2025-06-04 02:23:39,178 | INFO     | . initial setup = 4 s
[2025-06-03 19:23:52] 2025-06-04 02:23:39,178 | INFO     | . payload setup = 8 s
[2025-06-03 19:23:52] 2025-06-04 02:23:39,178 | INFO     | . stage-in = 0 s
[2025-06-03 19:23:52] 2025-06-04 02:23:39,178 | INFO     | . payload execution = 25 s
[2025-06-03 19:23:52] 2025-06-04 02:23:39,178 | INFO     | . stage-out = 0 s
[2025-06-03 19:23:52] 2025-06-04 02:23:39,178 | INFO     | . log creation = 0 s
[2025-06-03 19:23:52] 2025-06-04 02:23:39,178 | INFO     | ..............................
[2025-06-03 19:23:52] 2025-06-04 02:23:39,179 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 19:23:52] 2025-06-04 02:23:39,179 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678213723/pilotlog.txt
[2025-06-03 19:23:52] 2025-06-04 02:23:39,195 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 19:23:52] - Log from pilotlog.txt -
[2025-06-03 19:23:52] 2025-06-04 02:23:39,174 | INFO     | extracted standard info from prmon json
[2025-06-03 19:23:52] 2025-06-04 02:23:39,174 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 19:23:52] 2025-06-04 02:23:39,174 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 19:23:52] 2025-06-04 02:23:39,175 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 19:23:52] 2025-06-04 02:23:39,175 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 19:23:52] 2025-06-04 02:23:39,176 | WARNING  | found no stored workdir sizes
[2025-06-03 19:23:52] 2025-06-04 02:23:39,176 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 19:23:52] 2025-06-04 02:23:39,177 | WARNING  | wrong length of table data, x=[1749003670.0], y=[2217.0] (must be same and length>=4)
[2025-06-03 19:23:52] 2025-06-04 02:23:39,177 | INFO     | ..............................
[2025-06-03 19:23:52] 2025-06-04 02:23:39,177 | INFO     | . Timing measurements:
[2025-06-03 19:23:52] 2025-06-04 02:23:39,178 | INFO     | . get job = 0 s
[2025-06-03 19:23:52] 2025-06-04 02:23:39,178 | INFO     | . initial setup = 4 s
[2025-06-03 19:23:52] 2025-06-04 02:23:39,178 | INFO     | . payload setup = 8 s
[2025-06-03 19:23:52] 2025-06-04 02:23:39,178 | INFO     | . stage-in = 0 s
[2025-06-03 19:23:52] 2025-06-04 02:23:39,178 | INFO     | . payload execution = 25 s
[2025-06-03 19:23:52] 2025-06-04 02:23:39,178 | INFO     | . stage-out = 0 s
[2025-06-03 19:23:52] 2025-06-04 02:23:39,178 | INFO     | . log creation = 0 s
[2025-06-03 19:23:52] 2025-06-04 02:23:39,178 | INFO     | ..............................
[2025-06-03 19:23:52] 2025-06-04 02:23:39,179 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 19:23:52] 2025-06-04 02:23:39,179 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678213723/pilotlog.txt
[2025-06-03 19:23:52] 2025-06-04 02:23:39,195 | WARNING  | 
[2025-06-03 19:23:52] [begin log extracts]
[2025-06-03 19:23:52] - Log from pilotlog.txt -
[2025-06-03 19:23:52] 2025-06-04 02:23:39,174 | INFO     | extracted standard info from prmon json
[2025-06-03 19:23:52] 2025-06-04 02:23:39,174 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 19:23:52] 2025-06-04 02:23:39,174 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 19:23:52] 2025-06-04 02:23:39,175 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 19:23:52] 2025-06-04 02:23:39,175 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 19:23:52] 2025-06-04 02:23:39,176 | WARNING  | found no stored workdir sizes
[2025-06-03 19:23:52] 2025-06-04 02:23:39,176 | INFO     | will not add max space = 0 B to job metrics
[2025-06-03 19:23:52] 2025-06-04 02:23:39,177 | WARNING  | wrong length of table data, x=[1749003670.0], y=[2217.0] (must be same and length>=4)
[2025-06-03 19:23:52] 2025-06-04 02:23:39,177 | INFO     | ..............................
[2025-06-03 19:23:52] 2025-06-04 02:23:39,177 | INFO     | . Timing measurements:
[2025-06-03 19:23:52] 2025-06-04 02:23:39,178 | INFO     | . get job = 0 s
[2025-06-03 19:23:52] 2025-06-04 02:23:39,178 | INFO     | . initial setup = 4 s
[2025-06-03 19:23:52] 2025-06-04 02:23:39,178 | INFO     | . payload setup = 8 s
[2025-06-03 19:23:52] 2025-06-04 02:23:39,178 | INFO     | . stage-in = 0 s
[2025-06-03 19:23:52] 2025-06-04 02:23:39,178 | INFO     | . payload execution = 25 s
[2025-06-03 19:23:52] 2025-06-04 02:23:39,178 | INFO     | . stage-out = 0 s
[2025-06-03 19:23:52] 2025-06-04 02:23:39,178 | INFO     | . log creation = 0 s
[2025-06-03 19:23:52] 2025-06-04 02:23:39,178 | INFO     | ..............................
[2025-06-03 19:23:52] 2025-06-04 02:23:39,179 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 19:23:52] 2025-06-04 02:23:39,179 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678213723/pilotlog.txt
[2025-06-03 19:23:52] [end log extracts]
[2025-06-03 19:23:52] 2025-06-04 02:23:39,195 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 19:23:52] 2025-06-04 02:23:39,196 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 19:23:52] 2025-06-04 02:23:39,269 | INFO     | 
[2025-06-03 19:23:52] 2025-06-04 02:23:39,269 | INFO     | job summary report
[2025-06-03 19:23:52] 2025-06-04 02:23:39,269 | INFO     | --------------------------------------------------
[2025-06-03 19:23:52] 2025-06-04 02:23:39,269 | INFO     | PanDA job id: 6678213723
[2025-06-03 19:23:52] 2025-06-04 02:23:39,269 | INFO     | task id: 45006595
[2025-06-03 19:23:52] 2025-06-04 02:23:39,270 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 19:21:25,053 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 19:23:52] 2025-06-04 02:23:39,270 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 19:23:52] 2025-06-04 02:23:39,270 | INFO     | pilot state: failed 
[2025-06-03 19:23:52] 2025-06-04 02:23:39,270 | INFO     | transexitcode: 65
[2025-06-03 19:23:52] 2025-06-04 02:23:39,270 | INFO     | exeerrorcode: 65
[2025-06-03 19:23:52] 2025-06-04 02:23:39,270 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 19:23:52] 2025-06-04 02:23:39,270 | INFO     | exitcode: 65
[2025-06-03 19:23:52] 2025-06-04 02:23:39,270 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 19:23:52] 2025-06-04 02:23:39,271 | INFO     | cpuconsumptiontime: 28 s
[2025-06-03 19:23:52] 2025-06-04 02:23:39,271 | INFO     | nevents: 0
[2025-06-03 19:23:52] 2025-06-04 02:23:39,271 | INFO     | neventsw: 0
[2025-06-03 19:23:52] 2025-06-04 02:23:39,271 | INFO     | pid: 973334
[2025-06-03 19:23:52] 2025-06-04 02:23:39,271 | INFO     | pgrp: 973334
[2025-06-03 19:23:52] 2025-06-04 02:23:39,271 | INFO     | corecount: 12
[2025-06-03 19:23:52] 2025-06-04 02:23:39,271 | INFO     | event service: False
[2025-06-03 19:23:52] 2025-06-04 02:23:39,271 | INFO     | sizes: {0: 2405181, 6: 2405387, 11: 2405415, 37: 2428535, 39: 2432798, 163: 2432912}
[2025-06-03 19:23:52] 2025-06-04 02:23:39,271 | INFO     | --------------------------------------------------
[2025-06-03 19:23:52] 2025-06-04 02:23:39,272 | INFO     | 
[2025-06-03 19:23:52] 2025-06-04 02:23:39,272 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 19:23:52] 2025-06-04 02:23:39,298 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 19:23:52] 2025-06-04 02:23:39,299 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 19:23:52] 2025-06-04 02:23:39,299 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 19:23:52] 2025-06-04 02:23:39,299 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 19:23:52] 2025-06-04 02:23:39,299 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 19:23:52] 2025-06-04 02:23:39,299 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 19:23:52] 2025-06-04 02:23:39,299 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 19:23:52] 2025-06-04 02:23:39,300 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 19:23:52] 2025-06-04 02:23:39,300 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 19:23:52] 2025-06-04 02:23:39,300 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 19:23:52] 2025-06-04 02:23:39,300 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 19:23:52] 2025-06-04 02:23:39,300 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 19:23:52] 2025-06-04 02:23:39,300 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 19:23:52] 2025-06-04 02:23:39,300 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 19:23:52] 2025-06-04 02:23:39,300 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 19:23:52] 2025-06-04 02:23:39,301 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 19:23:52] 2025-06-04 02:23:39,301 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 19:23:52] 2025-06-04 02:23:39,301 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 19:23:52] 2025-06-04 02:23:39,301 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 19:23:52] 2025-06-04 02:23:39,301 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 19:23:52] 2025-06-04 02:23:39,301 | INFO     | job 6678213723 has completed (purged errors)
[2025-06-03 19:23:52] 2025-06-04 02:23:39,302 | INFO     | overall cleanup function is called
[2025-06-03 19:23:52] 2025-06-04 02:23:40,309 | INFO     | --- collectZombieJob: --- 10, [973334]
[2025-06-03 19:23:52] 2025-06-04 02:23:40,309 | INFO     | zombie collector waiting for pid 973334
[2025-06-03 19:23:52] 2025-06-04 02:23:40,309 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 19:23:52] 2025-06-04 02:23:40,310 | INFO     | collected zombie processes
[2025-06-03 19:23:52] 2025-06-04 02:23:40,310 | INFO     | will attempt to kill all subprocesses of pid=973334
[2025-06-03 19:23:52] 2025-06-04 02:23:40,431 | INFO     | process IDs to be killed: [973334] (in reverse order)
[2025-06-03 19:23:52] 2025-06-04 02:23:40,485 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 19:23:52] 2025-06-04 02:23:40,485 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 19:23:52] 2025-06-04 02:23:40,492 | INFO     | did not find any defunct processes belonging to 973334
[2025-06-03 19:23:52] 2025-06-04 02:23:40,497 | INFO     | did not find any defunct processes belonging to 973334
[2025-06-03 19:23:52] 2025-06-04 02:23:40,497 | INFO     | ready for new job
[2025-06-03 19:23:52] 2025-06-04 02:23:40,497 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 19:23:52] 2025-06-04 02:23:40,498 | INFO     | **************************************
[2025-06-03 19:23:52] 2025-06-04 02:23:40,499 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 19:23:52] 2025-06-04 02:23:40,499 | INFO     | **************************************
[2025-06-03 19:23:52] 2025-06-04 02:23:40,499 | INFO     | 
[2025-06-03 19:23:52] 2025-06-04 02:23:40,501 | INFO     | architecture information:
[2025-06-03 19:23:52] 2025-06-04 02:23:40,502 | INFO     | executing command: cat /etc/os-release
[2025-06-03 19:23:52] 2025-06-04 02:23:40,517 | INFO     | cat /etc/os-release:
[2025-06-03 19:23:52] NAME="CentOS Linux"
[2025-06-03 19:23:52] VERSION="7 (Core)"
[2025-06-03 19:23:52] ID="centos"
[2025-06-03 19:23:52] ID_LIKE="rhel fedora"
[2025-06-03 19:23:52] VERSION_ID="7"
[2025-06-03 19:23:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 19:23:52] ANSI_COLOR="0;31"
[2025-06-03 19:23:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 19:23:52] HOME_URL="https://www.centos.org/"
[2025-06-03 19:23:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 19:23:52] 
[2025-06-03 19:23:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 19:23:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 19:23:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 19:23:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 19:23:52] 
[2025-06-03 19:23:52] 2025-06-04 02:23:40,517 | INFO     | **************************************
[2025-06-03 19:23:52] 2025-06-04 02:23:41,020 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 19:23:52] 2025-06-04 02:23:41,040 | INFO     | sufficient remaining disk space (2244018700288 B)
[2025-06-03 19:23:52] 2025-06-04 02:23:41,041 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 19:23:52] 2025-06-04 02:23:41,041 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 19:23:52] 2025-06-04 02:23:41,041 | INFO     | update_server=False
[2025-06-03 19:23:52] 2025-06-04 02:23:41,041 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 19:23:52] 2025-06-04 02:23:41,042 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 19:23:52] 2025-06-04 02:23:41,042 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:23:52] 2025-06-04 02:23:41,042 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 19:23:52] 2025-06-04 02:23:41,043 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 19:23:52] 2025-06-04 02:23:41,044 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 19:23:52] 2025-06-04 02:23:41,044 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 19:23:52] 2025-06-04 02:23:41,280 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 19:23:52] 2025-06-04 02:23:41,280 | INFO     | aborting loop
[2025-06-03 19:23:52] 2025-06-04 02:23:41,332 | INFO     | all data control threads have been joined
[2025-06-03 19:23:52] 2025-06-04 02:23:41,749 | INFO     | all payload control threads have been joined
[2025-06-03 19:23:52] 2025-06-04 02:23:42,047 | INFO     | [job] retrieve thread has finished
[2025-06-03 19:23:52] 2025-06-04 02:23:42,048 | INFO     | [job] queue monitor thread has finished
[2025-06-03 19:23:52] 2025-06-04 02:23:42,231 | INFO     | [payload] failed_post thread has finished
[2025-06-03 19:23:52] 2025-06-04 02:23:42,286 | INFO     | [job] job monitor thread has finished
[2025-06-03 19:23:52] 2025-06-04 02:23:42,337 | INFO     | [data] control thread has finished
[2025-06-03 19:23:52] 2025-06-04 02:23:42,384 | INFO     | all job control threads have been joined
[2025-06-03 19:23:52] 2025-06-04 02:23:42,403 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 19:23:52] 2025-06-04 02:23:42,405 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 19:23:52] 2025-06-04 02:23:42,642 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 19:23:52] 2025-06-04 02:23:42,754 | INFO     | [payload] control thread has finished
[2025-06-03 19:23:52] 2025-06-04 02:23:42,974 | INFO     | [job] validate thread has finished
[2025-06-03 19:23:52] 2025-06-04 02:23:43,048 | INFO     | [data] copytool_out thread has finished
[2025-06-03 19:23:52] 2025-06-04 02:23:43,161 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 19:23:52] 2025-06-04 02:23:43,264 | INFO     | [payload] validate_post thread has finished
[2025-06-03 19:23:52] 2025-06-04 02:23:43,291 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 19:23:52] 2025-06-04 02:23:43,379 | INFO     | [data] copytool_in thread has finished
[2025-06-03 19:23:52] 2025-06-04 02:23:43,390 | INFO     | [job] control thread has finished
[2025-06-03 19:23:52] 2025-06-04 02:23:46,409 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 19:23:52] 2025-06-04 02:23:46,719 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139888565180224)>', '<ExcThread(monitor, started 139887881742080)>']
[2025-06-03 19:23:52] 2025-06-04 02:23:47,075 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 19:23:52] 2025-06-04 02:23:47,075 | INFO     | [monitor] control thread has ended
[2025-06-03 19:23:52] 2025-06-04 02:23:51,745 | INFO     | all workflow threads have been joined
[2025-06-03 19:23:52] 2025-06-04 02:23:51,745 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 19:23:52] 2025-06-04 02:23:51,746 | INFO     | traces error code: 0
[2025-06-03 19:23:52] 2025-06-04 02:23:51,746 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 19:23:52] 2025-06-04 02:23:51,848 [wrapper] ==== pilot stdout END ====
[2025-06-03 19:23:52] 2025-06-04 02:23:51,853 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 19:23:52] 2025-06-04 02:23:51,858 [wrapper] pilotpid: 966962
[2025-06-03 19:23:52] 2025-06-04 02:23:51,862 [wrapper] Pilot exit status: 0
[2025-06-03 19:23:52] 2025-06-04 02:23:51,879 [wrapper] pandaids: 6678213723
[2025-06-03 19:23:52] 2025-06-04 02:23:51,923 [wrapper] cleanup supervisor_pilot  966968 966963
[2025-06-03 19:23:52] 2025-06-04 02:23:51,927 [wrapper] Test setup, not cleaning
[2025-06-03 19:23:52] 2025-06-04 02:23:51,932 [wrapper] apfmon messages muted
[2025-06-03 19:23:52] 2025-06-04 02:23:51,937 [wrapper] ==== wrapper stdout END ====
[2025-06-03 19:23:52] 2025-06-04 02:23:51,941 [wrapper] ==== wrapper stderr END ====
[2025-06-03 19:23:52]  *** Error codes and diagnostics ***
[2025-06-03 19:23:52]     "exeErrorCode": 65,
[2025-06-03 19:23:52]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 19:23:52]     "pilotErrorCode": 1305,
[2025-06-03 19:23:52]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 19:23:52]  *** Listing of results directory ***
[2025-06-03 19:23:52] total 214492
[2025-06-03 19:23:52] -rw-r--r--. 1 boinc boinc    495897 Jun  3 16:42 pilot3.tar.gz
[2025-06-03 19:23:52] -rw-r--r--. 1 boinc boinc      5111 Jun  3 16:50 queuedata.json
[2025-06-03 19:23:52] -rwx------. 1 boinc boinc     37140 Jun  3 16:50 runpilot2-wrapper.sh
[2025-06-03 19:23:52] -rw-r--r--. 1 boinc boinc       100 Jun  3 19:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 19:23:52] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 19:20 run_atlas
[2025-06-03 19:23:52] -rw-r--r--. 1 boinc boinc       105 Jun  3 19:20 job.xml
[2025-06-03 19:23:52] -rw-r--r--. 1 boinc boinc      6597 Jun  3 19:20 init_data.xml
[2025-06-03 19:23:52] -rw-r--r--. 2 boinc boinc 215613929 Jun  3 19:20 EVNT.45006593._001948.pool.root.1
[2025-06-03 19:23:52] -rw-r--r--. 2 boinc boinc     15093 Jun  3 19:20 start_atlas.sh
[2025-06-03 19:23:52] drwxrwx--x. 2 boinc boinc      4096 Jun  3 19:20 shared
[2025-06-03 19:23:52] -rw-r--r--. 2 boinc boinc    508885 Jun  3 19:20 input.tar.gz
[2025-06-03 19:23:52] -rw-r--r--. 1 boinc boinc         0 Jun  3 19:20 boinc_lockfile
[2025-06-03 19:23:52] -rw-r--r--. 1 boinc boinc      2525 Jun  3 19:20 pandaJob.out
[2025-06-03 19:23:52] -rw-------. 1 boinc boinc    986077 Jun  3 19:20 agis_schedconf.cvmfs.json
[2025-06-03 19:23:52] -rw-------. 1 boinc boinc   1603667 Jun  3 19:20 agis_ddmendpoints.agis.ALL.json
[2025-06-03 19:23:52] drwx------. 4 boinc boinc      4096 Jun  3 19:20 pilot3
[2025-06-03 19:23:52] -rw-r--r--. 1 boinc boinc       522 Jun  3 19:21 boinc_task_state.xml
[2025-06-03 19:23:52] -rw-------. 1 boinc boinc       954 Jun  3 19:21 memory_monitor_summary.json
[2025-06-03 19:23:52] -rw-------. 1 boinc boinc     20744 Jun  3 19:21 log.45006595._048563.job.log.tgz.1
[2025-06-03 19:23:52] -rw-r--r--. 1 boinc boinc        22 Jun  3 19:23 wrapper_checkpoint.txt
[2025-06-03 19:23:52] -rw-r--r--. 1 boinc boinc      8192 Jun  3 19:23 boinc_mmap_file
[2025-06-03 19:23:52] -rw-------. 1 boinc boinc        95 Jun  3 19:23 pilot_heartbeat.json
[2025-06-03 19:23:52] -rw-------. 1 boinc boinc      8305 Jun  3 19:23 heartbeat.json
[2025-06-03 19:23:52] -rw-------. 1 boinc boinc      4475 Jun  3 19:23 pilotlog.txt
[2025-06-03 19:23:52] -rw-------. 1 boinc boinc     73996 Jun  3 19:23 log.45006595._048563.job.log.1
[2025-06-03 19:23:52] -rw-------. 1 boinc boinc       188 Jun  3 19:23 output.list
[2025-06-03 19:23:52] -rw-r--r--. 1 boinc boinc       620 Jun  3 19:23 runtime_log
[2025-06-03 19:23:52] -rw-------. 1 boinc boinc    112640 Jun  3 19:23 result.tar.gz
[2025-06-03 19:23:52] -rw-r--r--. 1 boinc boinc      8484 Jun  3 19:23 runtime_log.err
[2025-06-03 19:23:52] -rw-------. 1 boinc boinc       644 Jun  3 19:23 igtNDm5Zqg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOZmKDmo9YlJo.diag
[2025-06-03 19:23:52] -rw-r--r--. 1 boinc boinc     21442 Jun  3 19:23 stderr.txt
[2025-06-03 19:23:52] No HITS result produced
[2025-06-03 19:23:52]  *** Contents of shared directory: ***
[2025-06-03 19:23:52] total 211192
[2025-06-03 19:23:52] -rw-r--r--. 2 boinc boinc 215613929 Jun  3 19:20 ATLAS.root_0
[2025-06-03 19:23:52] -rw-r--r--. 2 boinc boinc     15093 Jun  3 19:20 start_atlas.sh
[2025-06-03 19:23:52] -rw-r--r--. 2 boinc boinc    508885 Jun  3 19:20 input.tar.gz
[2025-06-03 19:23:52] -rw-------. 1 boinc boinc    112640 Jun  3 19:23 result.tar.gz
19:23:53 (963354): run_atlas exited; CPU time 27.554428
19:23:53 (963354): called boinc_finish(0)

</stderr_txt>
]]>

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