Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:10:07 (4932): wrapper (7.7.26015): starting
22:10:07 (4932): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 22:10:07] Arguments: --nthreads 12
[2025-06-03 22:10:07] Threads: 12
[2025-06-03 22:10:07] Checking for CVMFS
[2025-06-03 22:10:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 22:10:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 22:10:07] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 22:10:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 22:10:07] 2.11.2.0 2925 35064 84768 146764 1 56 14014539 20275201 1 130560 0 15095990 99.985 6032927 7267 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-03 22:10:07] CVMFS is ok
[2025-06-03 22:10:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 22:10:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 22:10:07] Further information can be found at the LHC@home message board.
[2025-06-03 22:10:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 22:10:07] Checking for apptainer binary...
[2025-06-03 22:10:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 22:10:07] Running /usr/bin/apptainer --version
[2025-06-03 22:10:07] apptainer version 1.3.2-1.el7
[2025-06-03 22:10:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 22:10:09] c-205-10.aglt2.org
[2025-06-03 22:10:09] apptainer works
[2025-06-03 22:10:09] Set ATHENA_PROC_NUMBER=12
[2025-06-03 22:10:09] Set ATHENA_CORE_NUMBER=12
[2025-06-03 22:10:09] Starting ATLAS job with PandaID=6678074810
[2025-06-03 22:10:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 23:17:12]  *** The last 200 lines of the pilot log: ***
[2025-06-03 23:17:12]  guid=dee36419-82b5-4892-a78c-89ece42724a9
[2025-06-03 23:17:12]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 23:17:12]  is_altstaged=None
[2025-06-03 23:17:12]  is_tar=False
[2025-06-03 23:17:12]  lfn=log.45006595._046097.job.log.tgz.1
[2025-06-03 23:17:12]  mtime=0
[2025-06-03 23:17:12]  protocol_id=None
[2025-06-03 23:17:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 23:17:12]  replicas=None
[2025-06-03 23:17:12]  scope=mc23_13p6TeV
[2025-06-03 23:17:12]  status=None
[2025-06-03 23:17:12]  status_code=0
[2025-06-03 23:17:12]  storage_token=
[2025-06-03 23:17:12]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678074810/log.45006595._046097.job.log.tgz.1
[2025-06-03 23:17:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/70/log.45006595._046097.job.log.tgz.1
[2025-06-03 23:17:12]  workdir=None
[2025-06-03 23:17:12] ]
[2025-06-03 23:17:12] 2025-06-04 03:16:49,249 | INFO     | transferring file log.45006595._046097.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678074810/log.45006595._046097.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 23:17:12] 2025-06-04 03:16:49,249 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678074810/log.45006595._046097.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._046097.job
[2025-06-03 23:17:12] 2025-06-04 03:16:49,271 | INFO     | adding to output.list: log.45006595._046097.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/70/log.45006595._046097.job.log.tg
[2025-06-03 23:17:12] 2025-06-04 03:16:49,272 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 23:17:12] 2025-06-04 03:16:49,272 | INFO     | summary of transferred files:
[2025-06-03 23:17:12] 2025-06-04 03:16:49,273 | INFO     |  -- lfn=log.45006595._046097.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 23:17:12] 2025-06-04 03:16:49,273 | INFO     | stage-out finished correctly
[2025-06-03 23:17:12] 2025-06-04 03:16:50,371 | INFO     | PID=9412 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-03 23:17:12] 2025-06-04 03:16:50,434 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 23:17:12] 2025-06-04 03:16:50,860 | INFO     | monitor loop #300: job 0:6678074810 is in state 'finished'
[2025-06-03 23:17:12] 2025-06-04 03:16:50,860 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 23:17:12] 2025-06-04 03:16:50,888 | INFO     | job 6678074810 has state=finished
[2025-06-03 23:17:12] 2025-06-04 03:16:50,888 | INFO     | preparing for final server update for job 6678074810 in state='finished'
[2025-06-03 23:17:12] 2025-06-04 03:16:50,889 | INFO     | this job has now completed (state=finished)
[2025-06-03 23:17:12] 2025-06-04 03:16:50,889 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 23:17:12] 2025-06-04 03:16:50,889 | INFO     | log transfer has been attempted: DONE
[2025-06-03 23:17:12] 2025-06-04 03:16:50,889 | INFO     | job 6678074810 has finished - writing final server update
[2025-06-03 23:17:12] 2025-06-04 03:16:50,889 | INFO     | total number of processed events: 400 (read)
[2025-06-03 23:17:12] 2025-06-04 03:16:50,891 | INFO     | executing command: lscpu
[2025-06-03 23:17:12] 2025-06-04 03:16:50,922 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 23:17:12] 2025-06-04 03:16:53,363 | INFO     | monitor loop #301: job 0:6678074810 is in state 'finished'
[2025-06-03 23:17:12] 2025-06-04 03:16:53,363 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 23:17:12] 2025-06-04 03:16:55,785 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-03 23:17:12] 2025-06-04 03:16:55,786 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678074810/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 23:17:12] 2025-06-04 03:16:55,787 | INFO     | extracted standard info from prmon json
[2025-06-03 23:17:12] 2025-06-04 03:16:55,787 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 23:17:12] 2025-06-04 03:16:55,787 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 23:17:12] 2025-06-04 03:16:55,788 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 23:17:12] 2025-06-04 03:16:55,788 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 23:17:12] 2025-06-04 03:16:55,790 | INFO     | fitting pss+swap vs Time
[2025-06-03 23:17:12] 2025-06-04 03:16:55,790 | INFO     | sum of square deviations: 60482994.5
[2025-06-03 23:17:12] 2025-06-04 03:16:55,790 | INFO     | sum of deviations: 2296887412.0
[2025-06-03 23:17:12] 2025-06-04 03:16:55,791 | INFO     | mean x: 1749005096.5
[2025-06-03 23:17:12] 2025-06-04 03:16:55,791 | INFO     | mean y: 2691422.103448276
[2025-06-03 23:17:12] 2025-06-04 03:16:55,791 | INFO     | -- intersect: -66417098518.599556
[2025-06-03 23:17:12] 2025-06-04 03:16:55,791 | INFO     | intersect: -66417098518.599556
[2025-06-03 23:17:12] 2025-06-04 03:16:55,791 | INFO     | chi2: 0.04917645380683254
[2025-06-03 23:17:12] 2025-06-04 03:16:55,791 | INFO     | -- intersect: -66417098518.599556
[2025-06-03 23:17:12] 2025-06-04 03:16:55,792 | INFO     | current memory leak: 37.98 B/s (using 58 data points, chi2=0.05)
[2025-06-03 23:17:12] 2025-06-04 03:16:55,792 | INFO     | ..............................
[2025-06-03 23:17:12] 2025-06-04 03:16:55,792 | INFO     | . Timing measurements:
[2025-06-03 23:17:12] 2025-06-04 03:16:55,792 | INFO     | . get job = 0 s
[2025-06-03 23:17:12] 2025-06-04 03:16:55,793 | INFO     | . initial setup = 2 s
[2025-06-03 23:17:12] 2025-06-04 03:16:55,793 | INFO     | . payload setup = 9 s
[2025-06-03 23:17:12] 2025-06-04 03:16:55,793 | INFO     | . stage-in = 0 s
[2025-06-03 23:17:12] 2025-06-04 03:16:55,793 | INFO     | . payload execution = 3957 s
[2025-06-03 23:17:12] 2025-06-04 03:16:55,793 | INFO     | . stage-out = 0 s
[2025-06-03 23:17:12] 2025-06-04 03:16:55,793 | INFO     | . log creation = 0 s
[2025-06-03 23:17:12] 2025-06-04 03:16:55,793 | INFO     | ..............................
[2025-06-03 23:17:12] 2025-06-04 03:16:56,260 | INFO     | 
[2025-06-03 23:17:12] 2025-06-04 03:16:56,260 | INFO     | job summary report
[2025-06-03 23:17:12] 2025-06-04 03:16:56,261 | INFO     | --------------------------------------------------
[2025-06-03 23:17:12] 2025-06-04 03:16:56,261 | INFO     | PanDA job id: 6678074810
[2025-06-03 23:17:12] 2025-06-04 03:16:56,261 | INFO     | task id: 45006595
[2025-06-03 23:17:12] 2025-06-04 03:16:56,261 | INFO     | errors: (none)
[2025-06-03 23:17:12] 2025-06-04 03:16:56,261 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 23:17:12] 2025-06-04 03:16:56,261 | INFO     | pilot state: finished 
[2025-06-03 23:17:12] 2025-06-04 03:16:56,262 | INFO     | transexitcode: 0
[2025-06-03 23:17:12] 2025-06-04 03:16:56,262 | INFO     | exeerrorcode: 0
[2025-06-03 23:17:12] 2025-06-04 03:16:56,262 | INFO     | exeerrordiag: 
[2025-06-03 23:17:12] 2025-06-04 03:16:56,262 | INFO     | exitcode: 0
[2025-06-03 23:17:12] 2025-06-04 03:16:56,262 | INFO     | exitmsg: OK
[2025-06-03 23:17:12] 2025-06-04 03:16:56,263 | INFO     | cpuconsumptiontime: 40503 s
[2025-06-03 23:17:12] 2025-06-04 03:16:56,263 | INFO     | nevents: 400
[2025-06-03 23:17:12] 2025-06-04 03:16:56,263 | INFO     | neventsw: 0
[2025-06-03 23:17:12] 2025-06-04 03:16:56,263 | INFO     | pid: 15830
[2025-06-03 23:17:12] 2025-06-04 03:16:56,263 | INFO     | pgrp: 15830
[2025-06-03 23:17:12] 2025-06-04 03:16:56,263 | INFO     | corecount: 12
[2025-06-03 23:17:12] 2025-06-04 03:16:56,264 | INFO     | event service: False
[2025-06-03 23:17:12] 2025-06-04 03:16:56,264 | INFO     | sizes: {0: 2405013, 1: 2405212, 6: 2405418, 11: 2405446, 3970: 2431162, 3971: 2440103, 3973: 2440287, 3978: 2440457}
[2025-06-03 23:17:12] 2025-06-04 03:16:56,264 | INFO     | --------------------------------------------------
[2025-06-03 23:17:12] 2025-06-04 03:16:56,264 | INFO     | 
[2025-06-03 23:17:12] 2025-06-04 03:16:56,264 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 23:17:12] 2025-06-04 03:16:56,292 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 23:17:12] 2025-06-04 03:16:56,293 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 23:17:12] 2025-06-04 03:16:56,293 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 23:17:12] 2025-06-04 03:16:56,293 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 23:17:12] 2025-06-04 03:16:56,293 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 23:17:12] 2025-06-04 03:16:56,293 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 23:17:12] 2025-06-04 03:16:56,294 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 23:17:12] 2025-06-04 03:16:56,294 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 23:17:12] 2025-06-04 03:16:56,294 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 23:17:12] 2025-06-04 03:16:56,294 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 23:17:12] 2025-06-04 03:16:56,294 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 23:17:12] 2025-06-04 03:16:56,295 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 23:17:12] 2025-06-04 03:16:56,295 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 23:17:12] 2025-06-04 03:16:56,295 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 23:17:12] 2025-06-04 03:16:56,295 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 23:17:12] 2025-06-04 03:16:56,295 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 23:17:12] 2025-06-04 03:16:56,295 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 23:17:12] 2025-06-04 03:16:56,296 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 23:17:12] 2025-06-04 03:16:56,296 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 23:17:12] 2025-06-04 03:16:56,296 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 23:17:12] 2025-06-04 03:16:56,296 | INFO     | job 6678074810 has completed (purged errors)
[2025-06-03 23:17:12] 2025-06-04 03:16:56,296 | INFO     | overall cleanup function is called
[2025-06-03 23:17:12] 2025-06-04 03:16:57,303 | INFO     | --- collectZombieJob: --- 10, [15830]
[2025-06-03 23:17:12] 2025-06-04 03:16:57,303 | INFO     | zombie collector waiting for pid 15830
[2025-06-03 23:17:12] 2025-06-04 03:16:57,303 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 23:17:12] 2025-06-04 03:16:57,303 | INFO     | collected zombie processes
[2025-06-03 23:17:12] 2025-06-04 03:16:57,303 | INFO     | will attempt to kill all subprocesses of pid=15830
[2025-06-03 23:17:12] 2025-06-04 03:16:57,402 | INFO     | process IDs to be killed: [15830] (in reverse order)
[2025-06-03 23:17:12] 2025-06-04 03:16:57,453 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 23:17:12] 2025-06-04 03:16:57,453 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 23:17:12] 2025-06-04 03:16:57,457 | INFO     | did not find any defunct processes belonging to 15830
[2025-06-03 23:17:12] 2025-06-04 03:16:57,459 | INFO     | did not find any defunct processes belonging to 15830
[2025-06-03 23:17:12] 2025-06-04 03:16:57,459 | INFO     | ready for new job
[2025-06-03 23:17:12] 2025-06-04 03:16:57,459 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 23:17:12] 2025-06-04 03:16:57,460 | INFO     | **************************************
[2025-06-03 23:17:12] 2025-06-04 03:16:57,460 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 23:17:12] 2025-06-04 03:16:57,461 | INFO     | **************************************
[2025-06-03 23:17:12] 2025-06-04 03:16:57,461 | INFO     | 
[2025-06-03 23:17:12] 2025-06-04 03:16:57,461 | INFO     | architecture information:
[2025-06-03 23:17:12] 2025-06-04 03:16:57,462 | INFO     | executing command: cat /etc/os-release
[2025-06-03 23:17:12] 2025-06-04 03:16:57,477 | INFO     | cat /etc/os-release:
[2025-06-03 23:17:12] NAME="CentOS Linux"
[2025-06-03 23:17:12] VERSION="7 (Core)"
[2025-06-03 23:17:12] ID="centos"
[2025-06-03 23:17:12] ID_LIKE="rhel fedora"
[2025-06-03 23:17:12] VERSION_ID="7"
[2025-06-03 23:17:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 23:17:12] ANSI_COLOR="0;31"
[2025-06-03 23:17:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 23:17:12] HOME_URL="https://www.centos.org/"
[2025-06-03 23:17:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 23:17:12] 
[2025-06-03 23:17:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 23:17:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 23:17:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 23:17:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 23:17:12] 
[2025-06-03 23:17:12] 2025-06-04 03:16:57,477 | INFO     | **************************************
[2025-06-03 23:17:12] 2025-06-04 03:16:57,980 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 23:17:12] 2025-06-04 03:16:57,999 | INFO     | sufficient remaining disk space (29419896832 B)
[2025-06-03 23:17:12] 2025-06-04 03:16:58,000 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 23:17:12] 2025-06-04 03:16:58,000 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 23:17:12] 2025-06-04 03:16:58,000 | INFO     | update_server=False
[2025-06-03 23:17:12] 2025-06-04 03:16:58,000 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 23:17:12] 2025-06-04 03:16:58,001 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 23:17:12] 2025-06-04 03:16:58,080 | INFO     | all payload control threads have been joined
[2025-06-03 23:17:12] 2025-06-04 03:16:58,239 | INFO     | all job control threads have been joined
[2025-06-03 23:17:12] 2025-06-04 03:16:58,373 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 23:17:12] 2025-06-04 03:16:58,373 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 23:17:12] 2025-06-04 03:16:58,373 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:17:12] 2025-06-04 03:16:58,373 | INFO     | will abort loop
[2025-06-03 23:17:12] 2025-06-04 03:16:58,390 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 23:17:12] 2025-06-04 03:16:58,390 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 23:17:12] 2025-06-04 03:16:58,390 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 23:17:12] 2025-06-04 03:16:58,426 | INFO     | all data control threads have been joined
[2025-06-03 23:17:12] 2025-06-04 03:16:59,006 | INFO     | [job] retrieve thread has finished
[2025-06-03 23:17:12] 2025-06-04 03:16:59,052 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 23:17:12] 2025-06-04 03:16:59,084 | INFO     | [payload] control thread has finished
[2025-06-03 23:17:12] 2025-06-04 03:16:59,245 | INFO     | [job] control thread has finished
[2025-06-03 23:17:12] 2025-06-04 03:16:59,375 | INFO     | [job] job monitor thread has finished
[2025-06-03 23:17:12] 2025-06-04 03:16:59,414 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 23:17:12] 2025-06-04 03:16:59,431 | INFO     | [data] control thread has finished
[2025-06-03 23:17:12] 2025-06-04 03:16:59,557 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 23:17:12] 2025-06-04 03:16:59,611 | INFO     | [payload] failed_post thread has finished
[2025-06-03 23:17:12] 2025-06-04 03:16:59,780 | INFO     | [data] copytool_in thread has finished
[2025-06-03 23:17:12] 2025-06-04 03:16:59,827 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 23:17:12] 2025-06-04 03:17:00,007 | INFO     | [data] copytool_out thread has finished
[2025-06-03 23:17:12] 2025-06-04 03:17:00,345 | INFO     | [payload] validate_post thread has finished
[2025-06-03 23:17:12] 2025-06-04 03:17:00,403 | INFO     | [job] validate thread has finished
[2025-06-03 23:17:12] 2025-06-04 03:17:00,891 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:17:12] 2025-06-04 03:17:01,028 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 23:17:12] 2025-06-04 03:17:01,897 | INFO     | [job] queue monitor thread has finished
[2025-06-03 23:17:12] 2025-06-04 03:17:05,034 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 23:17:12] 2025-06-04 03:17:06,804 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140205932742464)>', '<ExcThread(monitor, started 140205046626048)>']
[2025-06-03 23:17:12] 2025-06-04 03:17:07,431 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 23:17:12] 2025-06-04 03:17:07,431 | INFO     | [monitor] control thread has ended
[2025-06-03 23:17:12] 2025-06-04 03:17:11,815 | INFO     | all workflow threads have been joined
[2025-06-03 23:17:12] 2025-06-04 03:17:11,815 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 23:17:12] 2025-06-04 03:17:11,815 | INFO     | traces error code: 0
[2025-06-03 23:17:12] 2025-06-04 03:17:11,815 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 23:17:12] 2025-06-04 03:17:11,905 [wrapper] ==== pilot stdout END ====
[2025-06-03 23:17:12] 2025-06-04 03:17:11,909 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 23:17:12] 2025-06-04 03:17:11,913 [wrapper] pilotpid: 9412
[2025-06-03 23:17:12] 2025-06-04 03:17:11,917 [wrapper] Pilot exit status: 0
[2025-06-03 23:17:12] 2025-06-04 03:17:11,933 [wrapper] pandaids: 6678074810
[2025-06-03 23:17:12] 2025-06-04 03:17:11,973 [wrapper] cleanup supervisor_pilot 25656 9413
[2025-06-03 23:17:12] 2025-06-04 03:17:11,977 [wrapper] Test setup, not cleaning
[2025-06-03 23:17:12] 2025-06-04 03:17:11,980 [wrapper] apfmon messages muted
[2025-06-03 23:17:12] 2025-06-04 03:17:11,984 [wrapper] ==== wrapper stdout END ====
[2025-06-03 23:17:12] 2025-06-04 03:17:11,988 [wrapper] ==== wrapper stderr END ====
[2025-06-03 23:17:12]  *** Error codes and diagnostics ***
[2025-06-03 23:17:12]     "exeErrorCode": 0,
[2025-06-03 23:17:12]     "exeErrorDiag": "",
[2025-06-03 23:17:12]     "pilotErrorCode": 0,
[2025-06-03 23:17:12]     "pilotErrorDiag": "",
[2025-06-03 23:17:12]  *** Listing of results directory ***
[2025-06-03 23:17:12] total 390468
[2025-06-03 23:17:12] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 17:41 pilot3.tar.gz
[2025-06-03 23:17:12] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 17:43 queuedata.json
[2025-06-03 23:17:12] -rwx------ 1 boincer umatlas     37140 Jun  3 17:43 runpilot2-wrapper.sh
[2025-06-03 23:17:12] -rw-r--r-- 1 boincer umatlas       100 Jun  3 22:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 23:17:12] -rwxr-xr-x 1 boincer umatlas      7986 Jun  3 22:10 run_atlas
[2025-06-03 23:17:12] -rw-r--r-- 1 boincer umatlas       105 Jun  3 22:10 job.xml
[2025-06-03 23:17:12] -rw-r--r-- 2 boincer umatlas 216994038 Jun  3 22:10 EVNT.45006593._001849.pool.root.1
[2025-06-03 23:17:12] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 22:10 start_atlas.sh
[2025-06-03 23:17:12] drwxrwx--x 2 boincer umatlas      4096 Jun  3 22:10 shared
[2025-06-03 23:17:12] -rw-r--r-- 2 boincer umatlas    508884 Jun  3 22:10 input.tar.gz
[2025-06-03 23:17:12] -rw-r--r-- 1 boincer umatlas         0 Jun  3 22:10 boinc_lockfile
[2025-06-03 23:17:12] -rw-r--r-- 1 boincer umatlas      2525 Jun  3 22:10 pandaJob.out
[2025-06-03 23:17:12] -rw------- 1 boincer umatlas    986077 Jun  3 22:10 agis_schedconf.cvmfs.json
[2025-06-03 23:17:12] -rw------- 1 boincer umatlas   1603667 Jun  3 22:10 agis_ddmendpoints.agis.ALL.json
[2025-06-03 23:17:12] drwx------ 4 boincer umatlas      4096 Jun  3 22:10 pilot3
[2025-06-03 23:17:12] -rw-r--r-- 1 boincer umatlas      5868 Jun  3 23:09 init_data.xml
[2025-06-03 23:17:12] -rw------- 1 boincer umatlas        95 Jun  3 23:16 pilot_heartbeat.json
[2025-06-03 23:17:12] -rw------- 1 boincer umatlas 177511638 Jun  3 23:16 HITS.45006595._046097.pool.root.1
[2025-06-03 23:17:12] -rw-r--r-- 1 boincer umatlas       529 Jun  3 23:16 boinc_task_state.xml
[2025-06-03 23:17:12] -rw------- 1 boincer umatlas      1049 Jun  3 23:16 memory_monitor_summary.json
[2025-06-03 23:17:12] -rw------- 1 boincer umatlas    357405 Jun  3 23:16 log.45006595._046097.job.log.tgz.1
[2025-06-03 23:17:12] -rw------- 1 boincer umatlas      7748 Jun  3 23:16 heartbeat.json
[2025-06-03 23:17:12] -rw-r--r-- 1 boincer umatlas        27 Jun  3 23:16 wrapper_checkpoint.txt
[2025-06-03 23:17:12] -rw-r--r-- 1 boincer umatlas      8192 Jun  3 23:16 boinc_mmap_file
[2025-06-03 23:17:12] -rw------- 1 boincer umatlas      4539 Jun  3 23:17 pilotlog.txt
[2025-06-03 23:17:12] -rw------- 1 boincer umatlas    389460 Jun  3 23:17 log.45006595._046097.job.log.1
[2025-06-03 23:17:12] -rw------- 1 boincer umatlas       357 Jun  3 23:17 output.list
[2025-06-03 23:17:12] -rw-r--r-- 1 boincer umatlas       620 Jun  3 23:17 runtime_log
[2025-06-03 23:17:12] -rw------- 1 boincer umatlas    768000 Jun  3 23:17 result.tar.gz
[2025-06-03 23:17:12] -rw------- 1 boincer umatlas       659 Jun  3 23:17 vIyMDmMbog7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmiGmKDmYxIZ8m.diag
[2025-06-03 23:17:12] -rw-r--r-- 1 boincer umatlas      8661 Jun  3 23:17 runtime_log.err
[2025-06-03 23:17:12] -rw-r--r-- 1 boincer umatlas     21360 Jun  3 23:17 stderr.txt
[2025-06-03 23:17:12] HITS file was successfully produced:
[2025-06-03 23:17:12] -rw------- 1 boincer umatlas 177511638 Jun  3 23:16 shared/HITS.pool.root.1
[2025-06-03 23:17:12]  *** Contents of shared directory: ***
[2025-06-03 23:17:12] total 386536
[2025-06-03 23:17:12] -rw-r--r-- 2 boincer umatlas 216994038 Jun  3 22:10 ATLAS.root_0
[2025-06-03 23:17:12] -rw-r--r-- 2 boincer umatlas     15093 Jun  3 22:10 start_atlas.sh
[2025-06-03 23:17:12] -rw-r--r-- 2 boincer umatlas    508884 Jun  3 22:10 input.tar.gz
[2025-06-03 23:17:12] -rw------- 1 boincer umatlas 177511638 Jun  3 23:16 HITS.pool.root.1
[2025-06-03 23:17:12] -rw------- 1 boincer umatlas    768000 Jun  3 23:17 result.tar.gz
23:17:13 (4932): run_atlas exited; CPU time 40425.859287
23:17:13 (4932): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN