Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
09:30:22 (1619356): wrapper (7.7.26015): starting
09:30:22 (1619356): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 09:30:22] Arguments: --nthreads 4
[2025-06-05 09:30:22] Threads: 4
[2025-06-05 09:30:22] Checking for CVMFS
[2025-06-05 09:30:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 09:30:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 09:30:22] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 09:30:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 09:30:22] 2.12.7.0 2709 3642 60624 146810 0 56 4831459 6144000 911 130560 0 4533387 99.994 843364 11726 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2025-06-05 09:30:22] CVMFS is ok
[2025-06-05 09:30:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 09:30:22] Checking for apptainer binary...
[2025-06-05 09:30:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 09:30:22] Running /usr/bin/apptainer --version
[2025-06-05 09:30:22] apptainer version 1.4.0
[2025-06-05 09:30:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 09:30:22] TS-P310
[2025-06-05 09:30:22] apptainer works
[2025-06-05 09:30:22] Set ATHENA_PROC_NUMBER=4
[2025-06-05 09:30:22] Set ATHENA_CORE_NUMBER=4
[2025-06-05 09:30:22] Starting ATLAS job with PandaID=6678212663
[2025-06-05 09:30:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 11:28:43]  *** The last 200 lines of the pilot log: ***
[2025-06-05 11:28:43] 2025-06-05 09:28:26,183 | INFO     | job 6678212663 has finished - writing final server update
[2025-06-05 11:28:43] 2025-06-05 09:28:26,183 | INFO     | total number of processed events: 400 (read)
[2025-06-05 11:28:43] 2025-06-05 09:28:26,184 | INFO     | executing command: lscpu
[2025-06-05 11:28:43] 2025-06-05 09:28:26,198 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 11:28:43] 2025-06-05 09:28:26,206 | INFO     | monitor loop #535: job 0:6678212663 is in state 'finished'
[2025-06-05 11:28:43] 2025-06-05 09:28:26,206 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:28:43] 2025-06-05 09:28:28,709 | INFO     | monitor loop #536: job 0:6678212663 is in state 'finished'
[2025-06-05 11:28:43] 2025-06-05 09:28:28,709 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:28:43] 2025-06-05 09:28:30,120 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 11:28:43] 2025-06-05 09:28:30,120 | INFO     | using path: /var/lib/boinc2/slots/0/PanDA_Pilot-6678212663/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 11:28:43] 2025-06-05 09:28:30,120 | INFO     | extracted standard info from prmon json
[2025-06-05 11:28:43] 2025-06-05 09:28:30,120 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 11:28:43] 2025-06-05 09:28:30,121 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 11:28:43] 2025-06-05 09:28:30,121 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 11:28:43] 2025-06-05 09:28:30,121 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 11:28:43] 2025-06-05 09:28:30,122 | INFO     | fitting pss+swap vs Time
[2025-06-05 11:28:43] 2025-06-05 09:28:30,122 | INFO     | sum of square deviations: 483971865.0
[2025-06-05 11:28:43] 2025-06-05 09:28:30,122 | INFO     | sum of deviations: -14001880830.000002
[2025-06-05 11:28:43] 2025-06-05 09:28:30,122 | INFO     | mean x: 1749112156.5
[2025-06-05 11:28:43] 2025-06-05 09:28:30,122 | INFO     | mean y: 2441428.724137931
[2025-06-05 11:28:43] 2025-06-05 09:28:30,122 | INFO     | -- intersect: 50606333400.04217
[2025-06-05 11:28:43] 2025-06-05 09:28:30,122 | INFO     | intersect: 50606333400.04217
[2025-06-05 11:28:43] 2025-06-05 09:28:30,123 | INFO     | chi2: 1.526134379990389
[2025-06-05 11:28:43] 2025-06-05 09:28:30,123 | INFO     | sum of square deviations: 424045160.0
[2025-06-05 11:28:43] 2025-06-05 09:28:30,123 | INFO     | sum of deviations: -12637280086.0
[2025-06-05 11:28:43] 2025-06-05 09:28:30,123 | INFO     | mean x: 1749112004.0
[2025-06-05 11:28:43] 2025-06-05 09:28:30,123 | INFO     | mean y: 2444903.5225225226
[2025-06-05 11:28:43] 2025-06-05 09:28:30,123 | INFO     | -- intersect: 52129011555.84029
[2025-06-05 11:28:43] 2025-06-05 09:28:30,123 | INFO     | intersect: 52129011555.84029
[2025-06-05 11:28:43] 2025-06-05 09:28:30,123 | INFO     | chi2: 1.5234530657301708
[2025-06-05 11:28:43] 2025-06-05 09:28:30,123 | INFO     | current chi2=1.5234530657301708 (change=0.17569319552548918 %)
[2025-06-05 11:28:43] 2025-06-05 09:28:30,123 | INFO     | right removable region: 110
[2025-06-05 11:28:43] 2025-06-05 09:28:30,123 | INFO     | sum of square deviations: 424045160.0
[2025-06-05 11:28:43] 2025-06-05 09:28:30,124 | INFO     | sum of deviations: -27394033354.0
[2025-06-05 11:28:43] 2025-06-05 09:28:30,124 | INFO     | mean x: 1749112309.0
[2025-06-05 11:28:43] 2025-06-05 09:28:30,124 | INFO     | mean y: 2474510.6756756757
[2025-06-05 11:28:43] 2025-06-05 09:28:30,124 | INFO     | -- intersect: 112998083121.41411
[2025-06-05 11:28:43] 2025-06-05 09:28:30,124 | INFO     | intersect: 112998083121.41411
[2025-06-05 11:28:43] 2025-06-05 09:28:30,124 | INFO     | chi2: 0.13350753865608186
[2025-06-05 11:28:43] 2025-06-05 09:28:30,124 | INFO     | current chi2=0.13350753865608186 (change=91.25191461469319 %)
[2025-06-05 11:28:43] 2025-06-05 09:28:30,124 | INFO     | sum of square deviations: 369281342.5
[2025-06-05 11:28:43] 2025-06-05 09:28:30,124 | INFO     | sum of deviations: -23542280281.000004
[2025-06-05 11:28:43] 2025-06-05 09:28:30,124 | INFO     | mean x: 1749112461.5
[2025-06-05 11:28:43] 2025-06-05 09:28:30,124 | INFO     | mean y: 2463763.962264151
[2025-06-05 11:28:43] 2025-06-05 09:28:30,124 | INFO     | -- intersect: 111511199983.48256
[2025-06-05 11:28:43] 2025-06-05 09:28:30,124 | INFO     | intersect: 111511199983.48256
[2025-06-05 11:28:43] 2025-06-05 09:28:30,124 | INFO     | chi2: 0.13279994560946445
[2025-06-05 11:28:43] 2025-06-05 09:28:30,124 | INFO     | current chi2=0.13279994560946445 (change=0.5300023157794743 %)
[2025-06-05 11:28:43] 2025-06-05 09:28:30,125 | INFO     | left removable region: 20
[2025-06-05 11:28:43] 2025-06-05 09:28:30,125 | INFO     | sum of square deviations: 226022842.5
[2025-06-05 11:28:43] 2025-06-05 09:28:30,125 | INFO     | sum of deviations: -13827701979.0
[2025-06-05 11:28:43] 2025-06-05 09:28:30,125 | INFO     | mean x: 1749112583.5
[2025-06-05 11:28:43] 2025-06-05 09:28:30,125 | INFO     | mean y: 2441357.0
[2025-06-05 11:28:43] 2025-06-05 09:28:30,125 | INFO     | -- intersect: 107010243156.31041
[2025-06-05 11:28:43] 2025-06-05 09:28:30,125 | INFO     | intersect: 107010243156.31041
[2025-06-05 11:28:43] 2025-06-05 09:28:30,125 | INFO     | chi2: 0.11166472038651931
[2025-06-05 11:28:43] 2025-06-05 09:28:30,125 | INFO     | -- intersect: 107010243156.31041
[2025-06-05 11:28:43] 2025-06-05 09:28:30,125 | INFO     | current memory leak: -61.18 B/s (using 90 data points, chi2=0.11)
[2025-06-05 11:28:43] 2025-06-05 09:28:30,125 | INFO     | ..............................
[2025-06-05 11:28:43] 2025-06-05 09:28:30,125 | INFO     | . Timing measurements:
[2025-06-05 11:28:43] 2025-06-05 09:28:30,125 | INFO     | . get job = 0 s
[2025-06-05 11:28:43] 2025-06-05 09:28:30,125 | INFO     | . initial setup = 1 s
[2025-06-05 11:28:43] 2025-06-05 09:28:30,125 | INFO     | . payload setup = 3 s
[2025-06-05 11:28:43] 2025-06-05 09:28:30,126 | INFO     | . stage-in = 0 s
[2025-06-05 11:28:43] 2025-06-05 09:28:30,126 | INFO     | . payload execution = 7051 s
[2025-06-05 11:28:43] 2025-06-05 09:28:30,126 | INFO     | . stage-out = 0 s
[2025-06-05 11:28:43] 2025-06-05 09:28:30,126 | INFO     | . log creation = 0 s
[2025-06-05 11:28:43] 2025-06-05 09:28:30,126 | INFO     | ..............................
[2025-06-05 11:28:43] 2025-06-05 09:28:30,164 | INFO     | 
[2025-06-05 11:28:43] 2025-06-05 09:28:30,164 | INFO     | job summary report
[2025-06-05 11:28:43] 2025-06-05 09:28:30,164 | INFO     | --------------------------------------------------
[2025-06-05 11:28:43] 2025-06-05 09:28:30,164 | INFO     | PanDA job id: 6678212663
[2025-06-05 11:28:43] 2025-06-05 09:28:30,164 | INFO     | task id: 45006595
[2025-06-05 11:28:43] 2025-06-05 09:28:30,164 | INFO     | errors: (none)
[2025-06-05 11:28:43] 2025-06-05 09:28:30,164 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 11:28:43] 2025-06-05 09:28:30,164 | INFO     | pilot state: finished 
[2025-06-05 11:28:43] 2025-06-05 09:28:30,164 | INFO     | transexitcode: 0
[2025-06-05 11:28:43] 2025-06-05 09:28:30,164 | INFO     | exeerrorcode: 0
[2025-06-05 11:28:43] 2025-06-05 09:28:30,165 | INFO     | exeerrordiag: 
[2025-06-05 11:28:43] 2025-06-05 09:28:30,165 | INFO     | exitcode: 0
[2025-06-05 11:28:43] 2025-06-05 09:28:30,165 | INFO     | exitmsg: OK
[2025-06-05 11:28:43] 2025-06-05 09:28:30,165 | INFO     | cpuconsumptiontime: 26976 s
[2025-06-05 11:28:43] 2025-06-05 09:28:30,165 | INFO     | nevents: 400
[2025-06-05 11:28:43] 2025-06-05 09:28:30,165 | INFO     | neventsw: 0
[2025-06-05 11:28:43] 2025-06-05 09:28:30,165 | INFO     | pid: 1629436
[2025-06-05 11:28:43] 2025-06-05 09:28:30,165 | INFO     | pgrp: 1629436
[2025-06-05 11:28:43] 2025-06-05 09:28:30,165 | INFO     | corecount: 4
[2025-06-05 11:28:43] 2025-06-05 09:28:30,165 | INFO     | event service: False
[2025-06-05 11:28:43] 2025-06-05 09:28:30,165 | INFO     | sizes: {0: 2397343, 3: 2397549, 11: 2397577, 7059: 2424751, 7060: 2433694, 7062: 2433750, 7069: 2434048}
[2025-06-05 11:28:43] 2025-06-05 09:28:30,165 | INFO     | --------------------------------------------------
[2025-06-05 11:28:43] 2025-06-05 09:28:30,165 | INFO     | 
[2025-06-05 11:28:43] 2025-06-05 09:28:30,165 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/0
[2025-06-05 11:28:43] 2025-06-05 09:28:30,174 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 11:28:43] 2025-06-05 09:28:30,174 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 11:28:43] 2025-06-05 09:28:30,175 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 11:28:43] 2025-06-05 09:28:30,175 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 11:28:43] 2025-06-05 09:28:30,175 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 11:28:43] 2025-06-05 09:28:30,175 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 11:28:43] 2025-06-05 09:28:30,175 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 11:28:43] 2025-06-05 09:28:30,175 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 11:28:43] 2025-06-05 09:28:30,175 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 11:28:43] 2025-06-05 09:28:30,175 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 11:28:43] 2025-06-05 09:28:30,175 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 11:28:43] 2025-06-05 09:28:30,175 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 11:28:43] 2025-06-05 09:28:30,175 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 11:28:43] 2025-06-05 09:28:30,175 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 11:28:43] 2025-06-05 09:28:30,175 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 11:28:43] 2025-06-05 09:28:30,175 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 11:28:43] 2025-06-05 09:28:30,175 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 11:28:43] 2025-06-05 09:28:30,176 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 11:28:43] 2025-06-05 09:28:30,176 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 11:28:43] 2025-06-05 09:28:30,176 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 11:28:43] 2025-06-05 09:28:30,176 | INFO     | job 6678212663 has completed (purged errors)
[2025-06-05 11:28:43] 2025-06-05 09:28:30,176 | INFO     | overall cleanup function is called
[2025-06-05 11:28:43] 2025-06-05 09:28:31,182 | INFO     | --- collectZombieJob: --- 10, [1629436]
[2025-06-05 11:28:43] 2025-06-05 09:28:31,182 | INFO     | zombie collector waiting for pid 1629436
[2025-06-05 11:28:43] 2025-06-05 09:28:31,183 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 11:28:43] 2025-06-05 09:28:31,183 | INFO     | collected zombie processes
[2025-06-05 11:28:43] 2025-06-05 09:28:31,183 | INFO     | will attempt to kill all subprocesses of pid=1629436
[2025-06-05 11:28:43] 2025-06-05 09:28:31,243 | INFO     | process IDs to be killed: [1629436] (in reverse order)
[2025-06-05 11:28:43] 2025-06-05 09:28:31,269 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 11:28:43] 2025-06-05 09:28:31,269 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 11:28:43] 2025-06-05 09:28:31,271 | INFO     | did not find any defunct processes belonging to 1629436
[2025-06-05 11:28:43] 2025-06-05 09:28:31,273 | INFO     | did not find any defunct processes belonging to 1629436
[2025-06-05 11:28:43] 2025-06-05 09:28:31,273 | INFO     | ready for new job
[2025-06-05 11:28:43] 2025-06-05 09:28:31,273 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 11:28:43] 2025-06-05 09:28:31,274 | INFO     | **************************************
[2025-06-05 11:28:43] 2025-06-05 09:28:31,274 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 11:28:43] 2025-06-05 09:28:31,274 | INFO     | **************************************
[2025-06-05 11:28:43] 2025-06-05 09:28:31,274 | INFO     | 
[2025-06-05 11:28:43] 2025-06-05 09:28:31,275 | INFO     | architecture information:
[2025-06-05 11:28:43] 2025-06-05 09:28:31,275 | INFO     | executing command: cat /etc/os-release
[2025-06-05 11:28:43] 2025-06-05 09:28:31,283 | INFO     | cat /etc/os-release:
[2025-06-05 11:28:43] NAME="CentOS Linux"
[2025-06-05 11:28:43] VERSION="7 (Core)"
[2025-06-05 11:28:43] ID="centos"
[2025-06-05 11:28:43] ID_LIKE="rhel fedora"
[2025-06-05 11:28:43] VERSION_ID="7"
[2025-06-05 11:28:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 11:28:43] ANSI_COLOR="0;31"
[2025-06-05 11:28:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 11:28:43] HOME_URL="https://www.centos.org/"
[2025-06-05 11:28:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 11:28:43] 
[2025-06-05 11:28:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 11:28:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 11:28:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 11:28:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 11:28:43] 
[2025-06-05 11:28:43] 2025-06-05 09:28:31,283 | INFO     | **************************************
[2025-06-05 11:28:43] 2025-06-05 09:28:31,786 | INFO     | executing command: df -mP /var/lib/boinc2/slots/0
[2025-06-05 11:28:43] 2025-06-05 09:28:31,795 | INFO     | sufficient remaining disk space (91117060096 B)
[2025-06-05 11:28:43] 2025-06-05 09:28:31,795 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 11:28:43] 2025-06-05 09:28:31,795 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 11:28:43] 2025-06-05 09:28:31,795 | INFO     | update_server=False
[2025-06-05 11:28:43] 2025-06-05 09:28:31,795 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 11:28:43] 2025-06-05 09:28:31,795 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 11:28:43] 2025-06-05 09:28:31,795 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 11:28:43] 2025-06-05 09:28:31,921 | INFO     | all data control threads have been joined
[2025-06-05 11:28:43] 2025-06-05 09:28:31,934 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 11:28:43] 2025-06-05 09:28:31,935 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 11:28:43] 2025-06-05 09:28:31,935 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 11:28:43] 2025-06-05 09:28:32,217 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 11:28:43] 2025-06-05 09:28:32,217 | INFO     | aborting loop
[2025-06-05 11:28:43] 2025-06-05 09:28:32,282 | INFO     | all payload control threads have been joined
[2025-06-05 11:28:43] 2025-06-05 09:28:32,502 | INFO     | all job control threads have been joined
[2025-06-05 11:28:43] 2025-06-05 09:28:32,799 | INFO     | [job] queue monitor thread has finished
[2025-06-05 11:28:43] 2025-06-05 09:28:32,800 | INFO     | [job] retrieve thread has finished
[2025-06-05 11:28:43] 2025-06-05 09:28:32,862 | INFO     | [payload] validate_post thread has finished
[2025-06-05 11:28:43] 2025-06-05 09:28:32,927 | INFO     | [data] control thread has finished
[2025-06-05 11:28:43] 2025-06-05 09:28:33,223 | INFO     | [job] job monitor thread has finished
[2025-06-05 11:28:43] 2025-06-05 09:28:33,287 | INFO     | [payload] control thread has finished
[2025-06-05 11:28:43] 2025-06-05 09:28:33,345 | INFO     | [payload] failed_post thread has finished
[2025-06-05 11:28:43] 2025-06-05 09:28:33,508 | INFO     | [job] control thread has finished
[2025-06-05 11:28:43] 2025-06-05 09:28:33,602 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 11:28:43] 2025-06-05 09:28:33,646 | INFO     | [data] copytool_in thread has finished
[2025-06-05 11:28:43] 2025-06-05 09:28:33,697 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 11:28:43] 2025-06-05 09:28:33,799 | INFO     | [data] copytool_out thread has finished
[2025-06-05 11:28:43] 2025-06-05 09:28:33,892 | INFO     | [job] validate thread has finished
[2025-06-05 11:28:43] 2025-06-05 09:28:34,044 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 11:28:43] 2025-06-05 09:28:34,259 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 11:28:43] 2025-06-05 09:28:34,472 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 11:28:43] 2025-06-05 09:28:38,477 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 11:28:43] 2025-06-05 09:28:38,611 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140642144642880)>', '<ExcThread(monitor, started 140641497499392)>']
[2025-06-05 11:28:43] 2025-06-05 09:28:38,967 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 11:28:43] 2025-06-05 09:28:38,968 | INFO     | [monitor] control thread has ended
[2025-06-05 11:28:43] 2025-06-05 09:28:43,636 | INFO     | all workflow threads have been joined
[2025-06-05 11:28:43] 2025-06-05 09:28:43,636 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 11:28:43] 2025-06-05 09:28:43,636 | INFO     | traces error code: 0
[2025-06-05 11:28:43] 2025-06-05 09:28:43,636 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 11:28:43] 2025-06-05 09:28:43,714 [wrapper] ==== pilot stdout END ====
[2025-06-05 11:28:43] 2025-06-05 09:28:43,716 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 11:28:43] 2025-06-05 09:28:43,717 [wrapper] pilotpid: 1622974
[2025-06-05 11:28:43] 2025-06-05 09:28:43,718 [wrapper] Pilot exit status: 0
[2025-06-05 11:28:43] 2025-06-05 09:28:43,724 [wrapper] pandaids: 6678212663
[2025-06-05 11:28:43] 2025-06-05 09:28:43,741 [wrapper] cleanup supervisor_pilot 1668520 1622975
[2025-06-05 11:28:43] 2025-06-05 09:28:43,743 [wrapper] Test setup, not cleaning
[2025-06-05 11:28:43] 2025-06-05 09:28:43,745 [wrapper] apfmon messages muted
[2025-06-05 11:28:43] 2025-06-05 09:28:43,746 [wrapper] ==== wrapper stdout END ====
[2025-06-05 11:28:43] 2025-06-05 09:28:43,748 [wrapper] ==== wrapper stderr END ====
[2025-06-05 11:28:43]  *** Error codes and diagnostics ***
[2025-06-05 11:28:43]     "exeErrorCode": 0,
[2025-06-05 11:28:43]     "exeErrorDiag": "",
[2025-06-05 11:28:43]     "pilotErrorCode": 0,
[2025-06-05 11:28:43]     "pilotErrorDiag": "",
[2025-06-05 11:28:43]  *** Listing of results directory ***
[2025-06-05 11:28:43] insgesamt 392720
[2025-06-05 11:28:43] -rw-r--r-- 1 boinc boinc    495897  4. Jun 01:42 pilot3.tar.gz
[2025-06-05 11:28:43] -rw-r--r-- 1 boinc boinc      5111  4. Jun 01:46 queuedata.json
[2025-06-05 11:28:43] -rwx------ 1 boinc boinc     37140  4. Jun 01:47 runpilot2-wrapper.sh
[2025-06-05 11:28:43] -rw-r--r-- 1 boinc boinc       100  5. Jun 09:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 11:28:43] -rwxr-xr-x 1 boinc boinc      7986  5. Jun 09:30 run_atlas
[2025-06-05 11:28:43] -rw-r--r-- 1 boinc boinc       105  5. Jun 09:30 job.xml
[2025-06-05 11:28:43] -rw-r--r-- 2 boinc boinc     15093  5. Jun 09:30 start_atlas.sh
[2025-06-05 11:28:43] drwxrwx--x 2 boinc boinc      4096  5. Jun 09:30 shared
[2025-06-05 11:28:43] -rw-r--r-- 2 boinc boinc    508884  5. Jun 09:30 input.tar.gz
[2025-06-05 11:28:43] -rw-r--r-- 1 boinc boinc      6726  5. Jun 09:30 init_data.xml
[2025-06-05 11:28:43] -rw-r--r-- 2 boinc boinc 215047511  5. Jun 09:30 EVNT.45006593._001946.pool.root.1
[2025-06-05 11:28:43] -rw-r--r-- 1 boinc boinc         0  5. Jun 09:30 boinc_lockfile
[2025-06-05 11:28:43] -rw-r--r-- 1 boinc boinc      2525  5. Jun 09:30 pandaJob.out
[2025-06-05 11:28:43] -rw------- 1 boinc boinc    983087  5. Jun 09:30 agis_schedconf.cvmfs.json
[2025-06-05 11:28:43] -rw------- 1 boinc boinc   1598969  5. Jun 09:30 agis_ddmendpoints.agis.ALL.json
[2025-06-05 11:28:43] drwx------ 4 boinc boinc      4096  5. Jun 09:30 pilot3
[2025-06-05 11:28:43] -rw------- 1 boinc boinc 181352846  5. Jun 11:27 HITS.45006595._048522.pool.root.1
[2025-06-05 11:28:43] -rw-r--r-- 1 boinc boinc       529  5. Jun 11:28 boinc_task_state.xml
[2025-06-05 11:28:43] -rw------- 1 boinc boinc      1019  5. Jun 11:28 memory_monitor_summary.json
[2025-06-05 11:28:43] -rw------- 1 boinc boinc    271751  5. Jun 11:28 log.45006595._048522.job.log.tgz.1
[2025-06-05 11:28:43] -rw------- 1 boinc boinc        95  5. Jun 11:28 pilot_heartbeat.json
[2025-06-05 11:28:43] -rw-r--r-- 1 boinc boinc      8192  5. Jun 11:28 boinc_mmap_file
[2025-06-05 11:28:43] -rw------- 1 boinc boinc      7658  5. Jun 11:28 heartbeat.json
[2025-06-05 11:28:43] -rw-r--r-- 1 boinc boinc        27  5. Jun 11:28 wrapper_checkpoint.txt
[2025-06-05 11:28:43] -rw------- 1 boinc boinc      4354  5. Jun 11:28 pilotlog.txt
[2025-06-05 11:28:43] -rw------- 1 boinc boinc    686400  5. Jun 11:28 log.45006595._048522.job.log.1
[2025-06-05 11:28:43] -rw------- 1 boinc boinc       357  5. Jun 11:28 output.list
[2025-06-05 11:28:43] -rw-r--r-- 1 boinc boinc       620  5. Jun 11:28 runtime_log
[2025-06-05 11:28:43] -rw------- 1 boinc boinc    972800  5. Jun 11:28 result.tar.gz
[2025-06-05 11:28:43] -rw-r--r-- 1 boinc boinc      8641  5. Jun 11:28 runtime_log.err
[2025-06-05 11:28:43] -rw------- 1 boinc boinc       644  5. Jun 11:28 8sdMDmMXqg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmiXmKDmVmqp9n.diag
[2025-06-05 11:28:43] -rw-r--r-- 1 boinc boinc     20765  5. Jun 11:28 stderr.txt
[2025-06-05 11:28:43] HITS file was successfully produced:
[2025-06-05 11:28:43] -rw------- 1 boinc boinc 181352846  5. Jun 11:27 shared/HITS.pool.root.1
[2025-06-05 11:28:43]  *** Contents of shared directory: ***
[2025-06-05 11:28:43] insgesamt 388588
[2025-06-05 11:28:43] -rw-r--r-- 2 boinc boinc     15093  5. Jun 09:30 start_atlas.sh
[2025-06-05 11:28:43] -rw-r--r-- 2 boinc boinc    508884  5. Jun 09:30 input.tar.gz
[2025-06-05 11:28:43] -rw-r--r-- 2 boinc boinc 215047511  5. Jun 09:30 ATLAS.root_0
[2025-06-05 11:28:43] -rw------- 1 boinc boinc 181352846  5. Jun 11:27 HITS.pool.root.1
[2025-06-05 11:28:43] -rw------- 1 boinc boinc    972800  5. Jun 11:28 result.tar.gz
11:28:45 (1619356): run_atlas exited; CPU time 27042.317826
11:28:45 (1619356): called boinc_finish(0)

</stderr_txt>
]]>

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