Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:27:21 (2593295): wrapper (7.7.26015): starting
19:27:21 (2593295): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 19:27:21] Arguments: --nthreads 4
[2025-06-05 19:27:21] Threads: 4
[2025-06-05 19:27:21] Checking for CVMFS
[2025-06-05 19:27:21] No cvmfs_config command found, will try listing directly
[2025-06-05 19:27:21] CVMFS is ok
[2025-06-05 19:27:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 19:27:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 19:27:21] Further information can be found at the LHC@home message board.
[2025-06-05 19:27:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 19:27:21] Checking for apptainer binary...
[2025-06-05 19:27:21] which: no apptainer in ((null))
[2025-06-05 19:27:21] apptainer is not installed, using version from CVMFS
[2025-06-05 19:27:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 19:27:21] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2025-06-05 19:27:21] apptainer works
[2025-06-05 19:27:21] Set ATHENA_PROC_NUMBER=4
[2025-06-05 19:27:21] Set ATHENA_CORE_NUMBER=4
[2025-06-05 19:27:21] Starting ATLAS job with PandaID=6678212552
[2025-06-05 19:27:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 21:58:15]  *** The last 200 lines of the pilot log: ***
[2025-06-05 21:58:15] 2025-06-05 19:58:02,785 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-6678212552/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 21:58:15] 2025-06-05 19:58:02,786 | INFO     | extracted standard info from prmon json
[2025-06-05 21:58:15] 2025-06-05 19:58:02,786 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 21:58:15] 2025-06-05 19:58:02,786 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 21:58:15] 2025-06-05 19:58:02,787 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 21:58:15] 2025-06-05 19:58:02,787 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 21:58:15] 2025-06-05 19:58:02,791 | INFO     | fitting pss+swap vs Time
[2025-06-05 21:58:15] 2025-06-05 19:58:02,791 | INFO     | sum of square deviations: 1005179777.0
[2025-06-05 21:58:15] 2025-06-05 19:58:02,792 | INFO     | sum of deviations: -15523859744.0
[2025-06-05 21:58:15] 2025-06-05 19:58:02,793 | INFO     | mean x: 1749148962.5
[2025-06-05 21:58:15] 2025-06-05 19:58:02,793 | INFO     | mean y: 2334869.9864864866
[2025-06-05 21:58:15] 2025-06-05 19:58:02,793 | INFO     | -- intersect: 27015953514.65717
[2025-06-05 21:58:15] 2025-06-05 19:58:02,793 | INFO     | intersect: 27015953514.65717
[2025-06-05 21:58:15] 2025-06-05 19:58:02,793 | INFO     | chi2: 2.407294731949899
[2025-06-05 21:58:15] 2025-06-05 19:58:02,793 | INFO     | sum of square deviations: 906703512.0
[2025-06-05 21:58:15] 2025-06-05 19:58:02,794 | INFO     | sum of deviations: -5833834979.000003
[2025-06-05 21:58:15] 2025-06-05 19:58:02,794 | INFO     | mean x: 1749148810.0
[2025-06-05 21:58:15] 2025-06-05 19:58:02,794 | INFO     | mean y: 2349490.986013986
[2025-06-05 21:58:15] 2025-06-05 19:58:02,795 | INFO     | -- intersect: 11256574688.311852
[2025-06-05 21:58:15] 2025-06-05 19:58:02,795 | INFO     | intersect: 11256574688.311852
[2025-06-05 21:58:15] 2025-06-05 19:58:02,795 | INFO     | chi2: 1.64117180242331
[2025-06-05 21:58:15] 2025-06-05 19:58:02,795 | INFO     | current chi2=1.64117180242331 (change=31.82505737077041 %)
[2025-06-05 21:58:15] 2025-06-05 19:58:02,795 | INFO     | sum of square deviations: 814878534.5
[2025-06-05 21:58:15] 2025-06-05 19:58:02,796 | INFO     | sum of deviations: -5392214041.499999
[2025-06-05 21:58:15] 2025-06-05 19:58:02,796 | INFO     | mean x: 1749148657.5
[2025-06-05 21:58:15] 2025-06-05 19:58:02,796 | INFO     | mean y: 2350225.065217391
[2025-06-05 21:58:15] 2025-06-05 19:58:02,797 | INFO     | -- intersect: 11576816298.62501
[2025-06-05 21:58:15] 2025-06-05 19:58:02,797 | INFO     | intersect: 11576816298.62501
[2025-06-05 21:58:15] 2025-06-05 19:58:02,797 | INFO     | chi2: 1.640444783879601
[2025-06-05 21:58:15] 2025-06-05 19:58:02,797 | INFO     | current chi2=1.640444783879601 (change=0.044298746946263574 %)
[2025-06-05 21:58:15] 2025-06-05 19:58:02,797 | INFO     | right removable region: 137
[2025-06-05 21:58:15] 2025-06-05 19:58:02,797 | INFO     | sum of square deviations: 906703512.0
[2025-06-05 21:58:15] 2025-06-05 19:58:02,798 | INFO     | sum of deviations: -35589480527.0
[2025-06-05 21:58:15] 2025-06-05 19:58:02,798 | INFO     | mean x: 1749149115.0
[2025-06-05 21:58:15] 2025-06-05 19:58:02,798 | INFO     | mean y: 2365413.5594405592
[2025-06-05 21:58:15] 2025-06-05 19:58:02,799 | INFO     | -- intersect: 68659106612.011734
[2025-06-05 21:58:15] 2025-06-05 19:58:02,799 | INFO     | intersect: 68659106612.011734
[2025-06-05 21:58:15] 2025-06-05 19:58:02,799 | INFO     | chi2: 0.9448806042565218
[2025-06-05 21:58:15] 2025-06-05 19:58:02,799 | INFO     | current chi2=0.9448806042565218 (change=60.74927628445512 %)
[2025-06-05 21:58:15] 2025-06-05 19:58:02,799 | INFO     | sum of square deviations: 814878534.5
[2025-06-05 21:58:15] 2025-06-05 19:58:02,800 | INFO     | sum of deviations: -29128077273.500004
[2025-06-05 21:58:15] 2025-06-05 19:58:02,800 | INFO     | mean x: 1749149267.5
[2025-06-05 21:58:15] 2025-06-05 19:58:02,801 | INFO     | mean y: 2354645.804347826
[2025-06-05 21:58:15] 2025-06-05 19:58:02,801 | INFO     | -- intersect: 62526219086.39592
[2025-06-05 21:58:15] 2025-06-05 19:58:02,801 | INFO     | intersect: 62526219086.39592
[2025-06-05 21:58:15] 2025-06-05 19:58:02,801 | INFO     | chi2: 0.919397796614133
[2025-06-05 21:58:15] 2025-06-05 19:58:02,801 | INFO     | current chi2=0.919397796614133 (change=2.69693414465205 %)
[2025-06-05 21:58:15] 2025-06-05 19:58:02,801 | INFO     | left removable region: 20
[2025-06-05 21:58:15] 2025-06-05 19:58:02,802 | INFO     | sum of square deviations: 496597218.0
[2025-06-05 21:58:15] 2025-06-05 19:58:02,802 | INFO     | sum of deviations: -9070899409.0
[2025-06-05 21:58:15] 2025-06-05 19:58:02,802 | INFO     | mean x: 1749149237.0
[2025-06-05 21:58:15] 2025-06-05 19:58:02,803 | INFO     | mean y: 2352298.205128205
[2025-06-05 21:58:15] 2025-06-05 19:58:02,803 | INFO     | -- intersect: 31952504665.261078
[2025-06-05 21:58:15] 2025-06-05 19:58:02,803 | INFO     | intersect: 31952504665.261078
[2025-06-05 21:58:15] 2025-06-05 19:58:02,803 | INFO     | chi2: 0.05291178871568646
[2025-06-05 21:58:15] 2025-06-05 19:58:02,803 | INFO     | -- intersect: 31952504665.261078
[2025-06-05 21:58:15] 2025-06-05 19:58:02,803 | INFO     | current memory leak: -18.27 B/s (using 117 data points, chi2=0.05)
[2025-06-05 21:58:15] 2025-06-05 19:58:02,804 | INFO     | ..............................
[2025-06-05 21:58:15] 2025-06-05 19:58:02,804 | INFO     | . Timing measurements:
[2025-06-05 21:58:15] 2025-06-05 19:58:02,804 | INFO     | . get job = 0 s
[2025-06-05 21:58:15] 2025-06-05 19:58:02,804 | INFO     | . initial setup = 1 s
[2025-06-05 21:58:15] 2025-06-05 19:58:02,804 | INFO     | . payload setup = 7 s
[2025-06-05 21:58:15] 2025-06-05 19:58:02,804 | INFO     | . stage-in = 0 s
[2025-06-05 21:58:15] 2025-06-05 19:58:02,804 | INFO     | . payload execution = 8998 s
[2025-06-05 21:58:15] 2025-06-05 19:58:02,804 | INFO     | . stage-out = 0 s
[2025-06-05 21:58:15] 2025-06-05 19:58:02,804 | INFO     | . log creation = 0 s
[2025-06-05 21:58:15] 2025-06-05 19:58:02,805 | INFO     | ..............................
[2025-06-05 21:58:15] 2025-06-05 19:58:02,920 | INFO     | 
[2025-06-05 21:58:15] 2025-06-05 19:58:02,921 | INFO     | job summary report
[2025-06-05 21:58:15] 2025-06-05 19:58:02,921 | INFO     | --------------------------------------------------
[2025-06-05 21:58:15] 2025-06-05 19:58:02,921 | INFO     | PanDA job id: 6678212552
[2025-06-05 21:58:15] 2025-06-05 19:58:02,921 | INFO     | task id: 45006595
[2025-06-05 21:58:15] 2025-06-05 19:58:02,921 | INFO     | errors: (none)
[2025-06-05 21:58:15] 2025-06-05 19:58:02,921 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 21:58:15] 2025-06-05 19:58:02,921 | INFO     | pilot state: finished 
[2025-06-05 21:58:15] 2025-06-05 19:58:02,921 | INFO     | transexitcode: 0
[2025-06-05 21:58:15] 2025-06-05 19:58:02,921 | INFO     | exeerrorcode: 0
[2025-06-05 21:58:15] 2025-06-05 19:58:02,921 | INFO     | exeerrordiag: 
[2025-06-05 21:58:15] 2025-06-05 19:58:02,921 | INFO     | exitcode: 0
[2025-06-05 21:58:15] 2025-06-05 19:58:02,921 | INFO     | exitmsg: OK
[2025-06-05 21:58:15] 2025-06-05 19:58:02,921 | INFO     | cpuconsumptiontime: 34374 s
[2025-06-05 21:58:15] 2025-06-05 19:58:02,922 | INFO     | nevents: 400
[2025-06-05 21:58:15] 2025-06-05 19:58:02,922 | INFO     | neventsw: 0
[2025-06-05 21:58:15] 2025-06-05 19:58:02,922 | INFO     | pid: 2604044
[2025-06-05 21:58:15] 2025-06-05 19:58:02,922 | INFO     | pgrp: 2604044
[2025-06-05 21:58:15] 2025-06-05 19:58:02,922 | INFO     | corecount: 4
[2025-06-05 21:58:15] 2025-06-05 19:58:02,922 | INFO     | event service: False
[2025-06-05 21:58:15] 2025-06-05 19:58:02,922 | INFO     | sizes: {0: 2397126, 1: 2397381, 6: 2397587, 12: 2397615, 9009: 2425596, 9010: 2434559, 9012: 2434743, 9016: 2434913}
[2025-06-05 21:58:15] 2025-06-05 19:58:02,922 | INFO     | --------------------------------------------------
[2025-06-05 21:58:15] 2025-06-05 19:58:02,922 | INFO     | 
[2025-06-05 21:58:15] 2025-06-05 19:58:02,922 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2025-06-05 21:58:15] 2025-06-05 19:58:02,945 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 21:58:15] 2025-06-05 19:58:02,945 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 21:58:15] 2025-06-05 19:58:02,946 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 21:58:15] 2025-06-05 19:58:02,946 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 21:58:15] 2025-06-05 19:58:02,946 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 21:58:15] 2025-06-05 19:58:02,946 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 21:58:15] 2025-06-05 19:58:02,946 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 21:58:15] 2025-06-05 19:58:02,946 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 21:58:15] 2025-06-05 19:58:02,946 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 21:58:15] 2025-06-05 19:58:02,946 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 21:58:15] 2025-06-05 19:58:02,946 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 21:58:15] 2025-06-05 19:58:02,946 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 21:58:15] 2025-06-05 19:58:02,946 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 21:58:15] 2025-06-05 19:58:02,947 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 21:58:15] 2025-06-05 19:58:02,947 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 21:58:15] 2025-06-05 19:58:02,947 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 21:58:15] 2025-06-05 19:58:02,947 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 21:58:15] 2025-06-05 19:58:02,947 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 21:58:15] 2025-06-05 19:58:02,947 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 21:58:15] 2025-06-05 19:58:02,947 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 21:58:15] 2025-06-05 19:58:02,947 | INFO     | job 6678212552 has completed (purged errors)
[2025-06-05 21:58:15] 2025-06-05 19:58:02,947 | INFO     | overall cleanup function is called
[2025-06-05 21:58:15] 2025-06-05 19:58:03,954 | INFO     | --- collectZombieJob: --- 10, [2604044]
[2025-06-05 21:58:15] 2025-06-05 19:58:03,955 | INFO     | zombie collector waiting for pid 2604044
[2025-06-05 21:58:15] 2025-06-05 19:58:03,955 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 21:58:15] 2025-06-05 19:58:03,955 | INFO     | collected zombie processes
[2025-06-05 21:58:15] 2025-06-05 19:58:03,955 | INFO     | will attempt to kill all subprocesses of pid=2604044
[2025-06-05 21:58:15] 2025-06-05 19:58:04,308 | INFO     | process IDs to be killed: [2604044] (in reverse order)
[2025-06-05 21:58:15] 2025-06-05 19:58:04,417 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 21:58:15] 2025-06-05 19:58:04,418 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 21:58:15] 2025-06-05 19:58:04,430 | INFO     | did not find any defunct processes belonging to 2604044
[2025-06-05 21:58:15] 2025-06-05 19:58:04,441 | INFO     | did not find any defunct processes belonging to 2604044
[2025-06-05 21:58:15] 2025-06-05 19:58:04,442 | INFO     | ready for new job
[2025-06-05 21:58:15] 2025-06-05 19:58:04,442 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 21:58:15] 2025-06-05 19:58:04,444 | INFO     | **************************************
[2025-06-05 21:58:15] 2025-06-05 19:58:04,444 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 21:58:15] 2025-06-05 19:58:04,444 | INFO     | **************************************
[2025-06-05 21:58:15] 2025-06-05 19:58:04,444 | INFO     | 
[2025-06-05 21:58:15] 2025-06-05 19:58:04,448 | INFO     | architecture information:
[2025-06-05 21:58:15] 2025-06-05 19:58:04,448 | INFO     | executing command: cat /etc/os-release
[2025-06-05 21:58:15] 2025-06-05 19:58:04,464 | INFO     | cat /etc/os-release:
[2025-06-05 21:58:15] NAME="CentOS Linux"
[2025-06-05 21:58:15] VERSION="7 (Core)"
[2025-06-05 21:58:15] ID="centos"
[2025-06-05 21:58:15] ID_LIKE="rhel fedora"
[2025-06-05 21:58:15] VERSION_ID="7"
[2025-06-05 21:58:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 21:58:15] ANSI_COLOR="0;31"
[2025-06-05 21:58:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 21:58:15] HOME_URL="https://www.centos.org/"
[2025-06-05 21:58:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 21:58:15] 
[2025-06-05 21:58:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 21:58:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 21:58:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 21:58:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 21:58:15] 
[2025-06-05 21:58:15] 2025-06-05 19:58:04,465 | INFO     | **************************************
[2025-06-05 21:58:15] 2025-06-05 19:58:04,968 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2025-06-05 21:58:15] 2025-06-05 19:58:04,986 | INFO     | sufficient remaining disk space (656164257792 B)
[2025-06-05 21:58:15] 2025-06-05 19:58:04,986 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 21:58:15] 2025-06-05 19:58:04,986 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 21:58:15] 2025-06-05 19:58:04,986 | INFO     | update_server=False
[2025-06-05 21:58:15] 2025-06-05 19:58:04,986 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 21:58:15] 2025-06-05 19:58:04,987 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 21:58:15] 2025-06-05 19:58:04,987 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 21:58:15] 2025-06-05 19:58:04,987 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 21:58:15] 2025-06-05 19:58:04,988 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 21:58:15] 2025-06-05 19:58:04,989 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 21:58:15] 2025-06-05 19:58:04,989 | INFO     | aborting loop
[2025-06-05 21:58:15] 2025-06-05 19:58:04,989 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 21:58:15] 2025-06-05 19:58:04,989 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 21:58:15] 2025-06-05 19:58:05,559 | INFO     | all data control threads have been joined
[2025-06-05 21:58:15] 2025-06-05 19:58:05,971 | INFO     | all payload control threads have been joined
[2025-06-05 21:58:15] 2025-06-05 19:58:05,992 | INFO     | [job] retrieve thread has finished
[2025-06-05 21:58:15] 2025-06-05 19:58:05,994 | INFO     | [job] job monitor thread has finished
[2025-06-05 21:58:15] 2025-06-05 19:58:06,001 | INFO     | [payload] failed_post thread has finished
[2025-06-05 21:58:15] 2025-06-05 19:58:06,108 | INFO     | [job] validate thread has finished
[2025-06-05 21:58:15] 2025-06-05 19:58:06,177 | INFO     | all job control threads have been joined
[2025-06-05 21:58:15] 2025-06-05 19:58:06,357 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 21:58:15] 2025-06-05 19:58:06,497 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 21:58:15] 2025-06-05 19:58:06,540 | INFO     | [payload] validate_post thread has finished
[2025-06-05 21:58:15] 2025-06-05 19:58:06,561 | INFO     | [data] control thread has finished
[2025-06-05 21:58:15] 2025-06-05 19:58:06,715 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 21:58:15] 2025-06-05 19:58:06,816 | INFO     | [data] copytool_in thread has finished
[2025-06-05 21:58:15] 2025-06-05 19:58:06,977 | INFO     | [payload] control thread has finished
[2025-06-05 21:58:15] 2025-06-05 19:58:06,993 | INFO     | [data] copytool_out thread has finished
[2025-06-05 21:58:15] 2025-06-05 19:58:07,183 | INFO     | [job] control thread has finished
[2025-06-05 21:58:15] 2025-06-05 19:58:07,251 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 21:58:15] 2025-06-05 19:58:07,931 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 21:58:15] 2025-06-05 19:58:08,935 | INFO     | [job] queue monitor thread has finished
[2025-06-05 21:58:15] 2025-06-05 19:58:08,994 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 21:58:15] 2025-06-05 19:58:10,179 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23262400022336)>', '<ExcThread(monitor, started 23262161499904)>']
[2025-06-05 21:58:15] 2025-06-05 19:58:11,018 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 21:58:15] 2025-06-05 19:58:11,018 | INFO     | [monitor] control thread has ended
[2025-06-05 21:58:15] 2025-06-05 19:58:15,205 | INFO     | all workflow threads have been joined
[2025-06-05 21:58:15] 2025-06-05 19:58:15,205 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 21:58:15] 2025-06-05 19:58:15,206 | INFO     | traces error code: 0
[2025-06-05 21:58:15] 2025-06-05 19:58:15,206 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 21:58:15] 2025-06-05 19:58:15,370 [wrapper] ==== pilot stdout END ====
[2025-06-05 21:58:15] 2025-06-05 19:58:15,373 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 21:58:15] 2025-06-05 19:58:15,376 [wrapper] pilotpid: 2597021
[2025-06-05 21:58:15] 2025-06-05 19:58:15,379 [wrapper] Pilot exit status: 0
[2025-06-05 21:58:15] 2025-06-05 19:58:15,391 [wrapper] pandaids: 6678212552
[2025-06-05 21:58:15] 2025-06-05 19:58:15,467 [wrapper] cleanup supervisor_pilot 2890608 2597022
[2025-06-05 21:58:15] 2025-06-05 19:58:15,471 [wrapper] Test setup, not cleaning
[2025-06-05 21:58:15] 2025-06-05 19:58:15,475 [wrapper] apfmon messages muted
[2025-06-05 21:58:15] 2025-06-05 19:58:15,478 [wrapper] ==== wrapper stdout END ====
[2025-06-05 21:58:15] 2025-06-05 19:58:15,482 [wrapper] ==== wrapper stderr END ====
[2025-06-05 21:58:15]  *** Error codes and diagnostics ***
[2025-06-05 21:58:15]     "exeErrorCode": 0,
[2025-06-05 21:58:15]     "exeErrorDiag": "",
[2025-06-05 21:58:15]     "pilotErrorCode": 0,
[2025-06-05 21:58:15]     "pilotErrorDiag": "",
[2025-06-05 21:58:15]  *** Listing of results directory ***
[2025-06-05 21:58:15] total 394320
[2025-06-05 21:58:15] -rw-r--r-- 1 boinc boinc    495897 Jun  4 01:42 pilot3.tar.gz
[2025-06-05 21:58:15] -rw-r--r-- 1 boinc boinc      5111 Jun  4 01:45 queuedata.json
[2025-06-05 21:58:15] -rwx------ 1 boinc boinc     37140 Jun  4 01:45 runpilot2-wrapper.sh
[2025-06-05 21:58:15] -rw-r--r-- 1 boinc boinc       100 Jun  5 19:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 21:58:15] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 19:27 run_atlas
[2025-06-05 21:58:15] -rw-r--r-- 1 boinc boinc       105 Jun  5 19:27 job.xml
[2025-06-05 21:58:15] -rw-r--r-- 2 boinc boinc 217218916 Jun  5 19:27 EVNT.45006593._001942.pool.root.1
[2025-06-05 21:58:15] -rw-r--r-- 1 boinc boinc      6633 Jun  5 19:27 init_data.xml
[2025-06-05 21:58:15] -rw-r--r-- 2 boinc boinc     15093 Jun  5 19:27 start_atlas.sh
[2025-06-05 21:58:15] drwxrwx--x 2 boinc boinc      4096 Jun  5 19:27 shared
[2025-06-05 21:58:15] -rw-r--r-- 2 boinc boinc    508878 Jun  5 19:27 input.tar.gz
[2025-06-05 21:58:15] -rw-r--r-- 1 boinc boinc         0 Jun  5 19:27 boinc_lockfile
[2025-06-05 21:58:15] -rw-r--r-- 1 boinc boinc      2525 Jun  5 19:27 pandaJob.out
[2025-06-05 21:58:15] -rw------- 1 boinc boinc    983229 Jun  5 19:27 agis_schedconf.cvmfs.json
[2025-06-05 21:58:15] -rw------- 1 boinc boinc   1598969 Jun  5 19:27 agis_ddmendpoints.agis.ALL.json
[2025-06-05 21:58:15] drwx------ 4 boinc boinc      4096 Jun  5 19:27 pilot3
[2025-06-05 21:58:15] -rw------- 1 boinc boinc 180461562 Jun  5 21:57 HITS.45006595._048411.pool.root.1
[2025-06-05 21:58:15] -rw-r--r-- 1 boinc boinc       528 Jun  5 21:57 boinc_task_state.xml
[2025-06-05 21:58:15] -rw------- 1 boinc boinc        95 Jun  5 21:57 pilot_heartbeat.json
[2025-06-05 21:58:15] -rw------- 1 boinc boinc      1033 Jun  5 21:57 memory_monitor_summary.json
[2025-06-05 21:58:15] -rw------- 1 boinc boinc    279689 Jun  5 21:57 log.45006595._048411.job.log.tgz.1
[2025-06-05 21:58:15] -rw------- 1 boinc boinc      7724 Jun  5 21:58 heartbeat.json
[2025-06-05 21:58:15] -rw-r--r-- 1 boinc boinc      8192 Jun  5 21:58 boinc_mmap_file
[2025-06-05 21:58:15] -rw-r--r-- 1 boinc boinc        26 Jun  5 21:58 wrapper_checkpoint.txt
[2025-06-05 21:58:15] -rw------- 1 boinc boinc      4486 Jun  5 21:58 pilotlog.txt
[2025-06-05 21:58:15] -rw------- 1 boinc boinc    854730 Jun  5 21:58 log.45006595._048411.job.log.1
[2025-06-05 21:58:15] -rw------- 1 boinc boinc       357 Jun  5 21:58 output.list
[2025-06-05 21:58:15] -rw-r--r-- 1 boinc boinc       620 Jun  5 21:58 runtime_log
[2025-06-05 21:58:15] -rw------- 1 boinc boinc   1157120 Jun  5 21:58 result.tar.gz
[2025-06-05 21:58:15] -rw-r--r-- 1 boinc boinc      9025 Jun  5 21:58 runtime_log.err
[2025-06-05 21:58:15] -rw------- 1 boinc boinc       662 Jun  5 21:58 HW2KDm4Uqg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmpJaKDm3eQg5m.diag
[2025-06-05 21:58:15] -rw-r--r-- 1 boinc boinc     20633 Jun  5 21:58 stderr.txt
[2025-06-05 21:58:15] HITS file was successfully produced:
[2025-06-05 21:58:15] -rw------- 1 boinc boinc 180461562 Jun  5 21:57 shared/HITS.pool.root.1
[2025-06-05 21:58:15]  *** Contents of shared directory: ***
[2025-06-05 21:58:15] total 390016
[2025-06-05 21:58:15] -rw-r--r-- 2 boinc boinc 217218916 Jun  5 19:27 ATLAS.root_0
[2025-06-05 21:58:15] -rw-r--r-- 2 boinc boinc     15093 Jun  5 19:27 start_atlas.sh
[2025-06-05 21:58:15] -rw-r--r-- 2 boinc boinc    508878 Jun  5 19:27 input.tar.gz
[2025-06-05 21:58:15] -rw------- 1 boinc boinc 180461562 Jun  5 21:57 HITS.pool.root.1
[2025-06-05 21:58:15] -rw------- 1 boinc boinc   1157120 Jun  5 21:58 result.tar.gz
21:58:17 (2593295): run_atlas exited; CPU time 34727.333872
21:58:17 (2593295): called boinc_finish(0)

</stderr_txt>
]]>

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