Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
12:36:55 (642781): wrapper (7.7.26015): starting
12:36:55 (642781): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 12:36:55] Arguments: --nthreads 4
[2025-06-04 12:36:55] Threads: 4
[2025-06-04 12:36:55] Checking for CVMFS
[2025-06-04 12:36:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 12:36:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 12:36:55] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 12:36:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 12:36:55] 2.9.2.0 80883 1540 89892 146777 2 55 34174430 36864001 0 130560 0 1519898 99.993 378599 35159 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 12:36:55] CVMFS is ok
[2025-06-04 12:36:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 12:36:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 12:36:55] Further information can be found at the LHC@home message board.
[2025-06-04 12:36:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:36:55] Checking for apptainer binary...
[2025-06-04 12:36:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 12:36:55] Running /usr/bin/apptainer --version
[2025-06-04 12:36:55] apptainer version 1.3.6-6.1
[2025-06-04 12:36:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:36:55] atlasA215b
[2025-06-04 12:36:55] apptainer works
[2025-06-04 12:36:55] Set ATHENA_PROC_NUMBER=4
[2025-06-04 12:36:55] Set ATHENA_CORE_NUMBER=4
[2025-06-04 12:36:55] Starting ATLAS job with PandaID=6668863973
[2025-06-04 12:36:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 14:06:59]  *** The last 200 lines of the pilot log: ***
[2025-06-04 14:06:59]  guid=b2609a1e-d551-42d2-adb6-a805ffaecf9b
[2025-06-04 14:06:59]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 14:06:59]  is_altstaged=None
[2025-06-04 14:06:59]  is_tar=False
[2025-06-04 14:06:59]  lfn=log.44871837._090222.job.log.tgz.1
[2025-06-04 14:06:59]  mtime=0
[2025-06-04 14:06:59]  protocol_id=None
[2025-06-04 14:06:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 14:06:59]  replicas=None
[2025-06-04 14:06:59]  scope=mc23_13p6TeV
[2025-06-04 14:06:59]  status=None
[2025-06-04 14:06:59]  status_code=0
[2025-06-04 14:06:59]  storage_token=
[2025-06-04 14:06:59]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6668863973/log.44871837._090222.job.log.tgz.1
[2025-06-04 14:06:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/0e/log.44871837._090222.job.log.tgz.1
[2025-06-04 14:06:59]  workdir=None
[2025-06-04 14:06:59] ]
[2025-06-04 14:06:59] 2025-06-04 12:06:38,490 | INFO     | transferring file log.44871837._090222.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6668863973/log.44871837._090222.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 14:06:59] 2025-06-04 12:06:38,490 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6668863973/log.44871837._090222.job.log.tgz.1 /local/data/boinc/slots/0/log.44871837._0902
[2025-06-04 14:06:59] 2025-06-04 12:06:38,509 | INFO     | adding to output.list: log.44871837._090222.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/0e/log.44871837._090222.job.log.tg
[2025-06-04 14:06:59] 2025-06-04 12:06:38,510 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 14:06:59] 2025-06-04 12:06:38,510 | INFO     | summary of transferred files:
[2025-06-04 14:06:59] 2025-06-04 12:06:38,510 | INFO     |  -- lfn=log.44871837._090222.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 14:06:59] 2025-06-04 12:06:38,510 | INFO     | stage-out finished correctly
[2025-06-04 14:06:59] 2025-06-04 12:06:38,547 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 14:06:59] 2025-06-04 12:06:38,712 | INFO     | PID=646512 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-04 14:06:59] 2025-06-04 12:06:41,191 | INFO     | job 6668863973 has state=finished
[2025-06-04 14:06:59] 2025-06-04 12:06:41,191 | INFO     | preparing for final server update for job 6668863973 in state='finished'
[2025-06-04 14:06:59] 2025-06-04 12:06:41,192 | INFO     | this job has now completed (state=finished)
[2025-06-04 14:06:59] 2025-06-04 12:06:41,192 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 14:06:59] 2025-06-04 12:06:41,192 | INFO     | log transfer has been attempted: DONE
[2025-06-04 14:06:59] 2025-06-04 12:06:41,192 | INFO     | job 6668863973 has finished - writing final server update
[2025-06-04 14:06:59] 2025-06-04 12:06:41,192 | INFO     | total number of processed events: 400 (read)
[2025-06-04 14:06:59] 2025-06-04 12:06:41,194 | INFO     | executing command: lscpu
[2025-06-04 14:06:59] 2025-06-04 12:06:41,216 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 14:06:59] 2025-06-04 12:06:41,708 | WARNING  | process 653137 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 14:06:59] 2025-06-04 12:06:41,709 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6668863973/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:06:59] 2025-06-04 12:06:41,751 | INFO     | number of running child processes to parent process 653137: 1
[2025-06-04 14:06:59] 2025-06-04 12:06:41,751 | INFO     | maximum number of monitored processes: 6
[2025-06-04 14:06:59] 2025-06-04 12:06:44,254 | INFO     | monitor loop #413: job 0:6668863973 is in state 'finished'
[2025-06-04 14:06:59] 2025-06-04 12:06:44,254 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 14:06:59] 2025-06-04 12:06:46,118 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 14:06:59] 2025-06-04 12:06:46,118 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6668863973/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 14:06:59] 2025-06-04 12:06:46,118 | INFO     | extracted standard info from prmon json
[2025-06-04 14:06:59] 2025-06-04 12:06:46,118 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 14:06:59] 2025-06-04 12:06:46,118 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 14:06:59] 2025-06-04 12:06:46,119 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 14:06:59] 2025-06-04 12:06:46,119 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 14:06:59] 2025-06-04 12:06:46,120 | INFO     | fitting pss+swap vs Time
[2025-06-04 14:06:59] 2025-06-04 12:06:46,120 | INFO     | sum of square deviations: 164765880.0
[2025-06-04 14:06:59] 2025-06-04 12:06:46,120 | INFO     | sum of deviations: -12504129712.999998
[2025-06-04 14:06:59] 2025-06-04 12:06:46,120 | INFO     | mean x: 1749036192.0
[2025-06-04 14:06:59] 2025-06-04 12:06:46,120 | INFO     | mean y: 2500073.111111111
[2025-06-04 14:06:59] 2025-06-04 12:06:46,120 | INFO     | -- intersect: 132737356449.31941
[2025-06-04 14:06:59] 2025-06-04 12:06:46,120 | INFO     | intersect: 132737356449.31941
[2025-06-04 14:06:59] 2025-06-04 12:06:46,120 | INFO     | chi2: 0.07554985838063868
[2025-06-04 14:06:59] 2025-06-04 12:06:46,120 | INFO     | -- intersect: 132737356449.31941
[2025-06-04 14:06:59] 2025-06-04 12:06:46,120 | INFO     | current memory leak: -75.89 B/s (using 81 data points, chi2=0.08)
[2025-06-04 14:06:59] 2025-06-04 12:06:46,120 | INFO     | ..............................
[2025-06-04 14:06:59] 2025-06-04 12:06:46,121 | INFO     | . Timing measurements:
[2025-06-04 14:06:59] 2025-06-04 12:06:46,121 | INFO     | . get job = 0 s
[2025-06-04 14:06:59] 2025-06-04 12:06:46,121 | INFO     | . initial setup = 1 s
[2025-06-04 14:06:59] 2025-06-04 12:06:46,121 | INFO     | . payload setup = 5 s
[2025-06-04 14:06:59] 2025-06-04 12:06:46,121 | INFO     | . stage-in = 0 s
[2025-06-04 14:06:59] 2025-06-04 12:06:46,121 | INFO     | . payload execution = 5350 s
[2025-06-04 14:06:59] 2025-06-04 12:06:46,121 | INFO     | . stage-out = 0 s
[2025-06-04 14:06:59] 2025-06-04 12:06:46,121 | INFO     | . log creation = 0 s
[2025-06-04 14:06:59] 2025-06-04 12:06:46,121 | INFO     | ..............................
[2025-06-04 14:06:59] 2025-06-04 12:06:46,269 | INFO     | 
[2025-06-04 14:06:59] 2025-06-04 12:06:46,269 | INFO     | job summary report
[2025-06-04 14:06:59] 2025-06-04 12:06:46,269 | INFO     | --------------------------------------------------
[2025-06-04 14:06:59] 2025-06-04 12:06:46,269 | INFO     | PanDA job id: 6668863973
[2025-06-04 14:06:59] 2025-06-04 12:06:46,269 | INFO     | task id: 44871837
[2025-06-04 14:06:59] 2025-06-04 12:06:46,269 | INFO     | errors: (none)
[2025-06-04 14:06:59] 2025-06-04 12:06:46,269 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 14:06:59] 2025-06-04 12:06:46,269 | INFO     | pilot state: finished 
[2025-06-04 14:06:59] 2025-06-04 12:06:46,269 | INFO     | transexitcode: 0
[2025-06-04 14:06:59] 2025-06-04 12:06:46,269 | INFO     | exeerrorcode: 0
[2025-06-04 14:06:59] 2025-06-04 12:06:46,269 | INFO     | exeerrordiag: 
[2025-06-04 14:06:59] 2025-06-04 12:06:46,270 | INFO     | exitcode: 0
[2025-06-04 14:06:59] 2025-06-04 12:06:46,270 | INFO     | exitmsg: OK
[2025-06-04 14:06:59] 2025-06-04 12:06:46,270 | INFO     | cpuconsumptiontime: 20382 s
[2025-06-04 14:06:59] 2025-06-04 12:06:46,270 | INFO     | nevents: 400
[2025-06-04 14:06:59] 2025-06-04 12:06:46,270 | INFO     | neventsw: 0
[2025-06-04 14:06:59] 2025-06-04 12:06:46,270 | INFO     | pid: 653137
[2025-06-04 14:06:59] 2025-06-04 12:06:46,270 | INFO     | pgrp: 653137
[2025-06-04 14:06:59] 2025-06-04 12:06:46,270 | INFO     | corecount: 4
[2025-06-04 14:06:59] 2025-06-04 12:06:46,270 | INFO     | event service: False
[2025-06-04 14:06:59] 2025-06-04 12:06:46,270 | INFO     | sizes: {0: 2405237, 1: 2405237, 4: 2405471, 11: 2405499, 5358: 2432054, 5359: 2432053, 5360: 2441240, 5368: 2441354}
[2025-06-04 14:06:59] 2025-06-04 12:06:46,270 | INFO     | --------------------------------------------------
[2025-06-04 14:06:59] 2025-06-04 12:06:46,270 | INFO     | 
[2025-06-04 14:06:59] 2025-06-04 12:06:46,270 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 14:06:59] 2025-06-04 12:06:46,292 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 14:06:59] 2025-06-04 12:06:46,292 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 14:06:59] 2025-06-04 12:06:46,292 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 14:06:59] 2025-06-04 12:06:46,292 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 14:06:59] 2025-06-04 12:06:46,292 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 14:06:59] 2025-06-04 12:06:46,292 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 14:06:59] 2025-06-04 12:06:46,293 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 14:06:59] 2025-06-04 12:06:46,293 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 14:06:59] 2025-06-04 12:06:46,293 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 14:06:59] 2025-06-04 12:06:46,293 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 14:06:59] 2025-06-04 12:06:46,293 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 14:06:59] 2025-06-04 12:06:46,293 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 14:06:59] 2025-06-04 12:06:46,293 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 14:06:59] 2025-06-04 12:06:46,293 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 14:06:59] 2025-06-04 12:06:46,293 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 14:06:59] 2025-06-04 12:06:46,293 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 14:06:59] 2025-06-04 12:06:46,293 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 14:06:59] 2025-06-04 12:06:46,293 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 14:06:59] 2025-06-04 12:06:46,293 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 14:06:59] 2025-06-04 12:06:46,293 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 14:06:59] 2025-06-04 12:06:46,293 | INFO     | job 6668863973 has completed (purged errors)
[2025-06-04 14:06:59] 2025-06-04 12:06:46,293 | INFO     | overall cleanup function is called
[2025-06-04 14:06:59] 2025-06-04 12:06:47,300 | INFO     | --- collectZombieJob: --- 10, [653137]
[2025-06-04 14:06:59] 2025-06-04 12:06:47,300 | INFO     | zombie collector waiting for pid 653137
[2025-06-04 14:06:59] 2025-06-04 12:06:47,300 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 14:06:59] 2025-06-04 12:06:47,300 | INFO     | collected zombie processes
[2025-06-04 14:06:59] 2025-06-04 12:06:47,300 | INFO     | will attempt to kill all subprocesses of pid=653137
[2025-06-04 14:06:59] 2025-06-04 12:06:47,348 | INFO     | process IDs to be killed: [653137] (in reverse order)
[2025-06-04 14:06:59] 2025-06-04 12:06:47,384 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 14:06:59] 2025-06-04 12:06:47,384 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 14:06:59] 2025-06-04 12:06:47,386 | INFO     | did not find any defunct processes belonging to 653137
[2025-06-04 14:06:59] 2025-06-04 12:06:47,387 | INFO     | did not find any defunct processes belonging to 653137
[2025-06-04 14:06:59] 2025-06-04 12:06:47,387 | INFO     | ready for new job
[2025-06-04 14:06:59] 2025-06-04 12:06:47,387 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 14:06:59] 2025-06-04 12:06:47,388 | INFO     | **************************************
[2025-06-04 14:06:59] 2025-06-04 12:06:47,388 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 14:06:59] 2025-06-04 12:06:47,388 | INFO     | **************************************
[2025-06-04 14:06:59] 2025-06-04 12:06:47,388 | INFO     | 
[2025-06-04 14:06:59] 2025-06-04 12:06:47,389 | INFO     | architecture information:
[2025-06-04 14:06:59] 2025-06-04 12:06:47,389 | INFO     | executing command: cat /etc/os-release
[2025-06-04 14:06:59] 2025-06-04 12:06:47,404 | INFO     | cat /etc/os-release:
[2025-06-04 14:06:59] NAME="CentOS Linux"
[2025-06-04 14:06:59] VERSION="7 (Core)"
[2025-06-04 14:06:59] ID="centos"
[2025-06-04 14:06:59] ID_LIKE="rhel fedora"
[2025-06-04 14:06:59] VERSION_ID="7"
[2025-06-04 14:06:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 14:06:59] ANSI_COLOR="0;31"
[2025-06-04 14:06:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 14:06:59] HOME_URL="https://www.centos.org/"
[2025-06-04 14:06:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 14:06:59] 
[2025-06-04 14:06:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 14:06:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 14:06:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 14:06:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 14:06:59] 
[2025-06-04 14:06:59] 2025-06-04 12:06:47,404 | INFO     | **************************************
[2025-06-04 14:06:59] 2025-06-04 12:06:47,907 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 14:06:59] 2025-06-04 12:06:47,926 | INFO     | sufficient remaining disk space (321159954432 B)
[2025-06-04 14:06:59] 2025-06-04 12:06:47,926 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 14:06:59] 2025-06-04 12:06:47,926 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 14:06:59] 2025-06-04 12:06:47,926 | INFO     | update_server=False
[2025-06-04 14:06:59] 2025-06-04 12:06:47,926 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 14:06:59] 2025-06-04 12:06:47,926 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:06:59] 2025-06-04 12:06:47,926 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 14:06:59] 2025-06-04 12:06:47,926 | INFO     | aborting loop
[2025-06-04 14:06:59] 2025-06-04 12:06:48,190 | INFO     | all job control threads have been joined
[2025-06-04 14:06:59] 2025-06-04 12:06:48,595 | INFO     | all data control threads have been joined
[2025-06-04 14:06:59] 2025-06-04 12:06:48,740 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 14:06:59] 2025-06-04 12:06:48,740 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 14:06:59] 2025-06-04 12:06:48,740 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 14:06:59] 2025-06-04 12:06:48,932 | INFO     | [job] queue monitor thread has finished
[2025-06-04 14:06:59] 2025-06-04 12:06:48,932 | INFO     | [job] retrieve thread has finished
[2025-06-04 14:06:59] 2025-06-04 12:06:48,932 | INFO     | [job] job monitor thread has finished
[2025-06-04 14:06:59] 2025-06-04 12:06:48,952 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 14:06:59] 2025-06-04 12:06:49,010 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 14:06:59] 2025-06-04 12:06:49,061 | INFO     | [payload] validate_post thread has finished
[2025-06-04 14:06:59] 2025-06-04 12:06:49,063 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 14:06:59] 2025-06-04 12:06:49,095 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 14:06:59] 2025-06-04 12:06:49,196 | INFO     | [job] control thread has finished
[2025-06-04 14:06:59] 2025-06-04 12:06:49,264 | INFO     | all payload control threads have been joined
[2025-06-04 14:06:59] 2025-06-04 12:06:49,348 | INFO     | [payload] failed_post thread has finished
[2025-06-04 14:06:59] 2025-06-04 12:06:49,601 | INFO     | [data] control thread has finished
[2025-06-04 14:06:59] 2025-06-04 12:06:49,704 | INFO     | [data] copytool_in thread has finished
[2025-06-04 14:06:59] 2025-06-04 12:06:49,835 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 14:06:59] 2025-06-04 12:06:50,076 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 14:06:59] 2025-06-04 12:06:50,270 | INFO     | [payload] control thread has finished
[2025-06-04 14:06:59] 2025-06-04 12:06:50,329 | INFO     | [job] validate thread has finished
[2025-06-04 14:06:59] 2025-06-04 12:06:51,069 | INFO     | [data] copytool_out thread has finished
[2025-06-04 14:06:59] 2025-06-04 12:06:53,102 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 14:06:59] 2025-06-04 12:06:54,070 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139835279476544)>', '<ExcThread(monitor, started 139834093971200)>']
[2025-06-04 14:06:59] 2025-06-04 12:06:54,772 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 14:06:59] 2025-06-04 12:06:54,773 | INFO     | [monitor] control thread has ended
[2025-06-04 14:06:59] 2025-06-04 12:06:59,096 | INFO     | all workflow threads have been joined
[2025-06-04 14:06:59] 2025-06-04 12:06:59,096 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 14:06:59] 2025-06-04 12:06:59,096 | INFO     | traces error code: 0
[2025-06-04 14:06:59] 2025-06-04 12:06:59,097 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 14:06:59] 2025-06-04 12:06:59,179 [wrapper] ==== pilot stdout END ====
[2025-06-04 14:06:59] 2025-06-04 12:06:59,183 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 14:06:59] 2025-06-04 12:06:59,187 [wrapper] pilotpid: 646512
[2025-06-04 14:06:59] 2025-06-04 12:06:59,191 [wrapper] Pilot exit status: 0
[2025-06-04 14:06:59] 2025-06-04 12:06:59,203 [wrapper] pandaids: 6668863973
[2025-06-04 14:06:59] 2025-06-04 12:06:59,227 [wrapper] cleanup supervisor_pilot  665698 646513
[2025-06-04 14:06:59] 2025-06-04 12:06:59,231 [wrapper] Test setup, not cleaning
[2025-06-04 14:06:59] 2025-06-04 12:06:59,235 [wrapper] apfmon messages muted
[2025-06-04 14:06:59] 2025-06-04 12:06:59,239 [wrapper] ==== wrapper stdout END ====
[2025-06-04 14:06:59] 2025-06-04 12:06:59,243 [wrapper] ==== wrapper stderr END ====
[2025-06-04 14:06:59]  *** Error codes and diagnostics ***
[2025-06-04 14:06:59]     "exeErrorCode": 0,
[2025-06-04 14:06:59]     "exeErrorDiag": "",
[2025-06-04 14:06:59]     "pilotErrorCode": 0,
[2025-06-04 14:06:59]     "pilotErrorDiag": "",
[2025-06-04 14:06:59]  *** Listing of results directory ***
[2025-06-04 14:06:59] total 418296
[2025-06-04 14:06:59] -rw-r--r-- 1 boinc boinc      5111 May 28 22:46 queuedata.json
[2025-06-04 14:06:59] -rw-r--r-- 1 boinc boinc    495897 May 28 22:46 pilot3.tar.gz
[2025-06-04 14:06:59] -rwx------ 1 boinc boinc     37140 May 28 22:46 runpilot2-wrapper.sh
[2025-06-04 14:06:59] -rw-r--r-- 1 boinc boinc       100 Jun  4 12:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 14:06:59] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 12:36 run_atlas
[2025-06-04 14:06:59] -rw-r--r-- 1 boinc boinc       105 Jun  4 12:36 job.xml
[2025-06-04 14:06:59] -rw-r--r-- 2 boinc boinc 224043709 Jun  4 12:36 EVNT.44871834._003511.pool.root.1
[2025-06-04 14:06:59] -rw-r--r-- 1 boinc boinc      6856 Jun  4 12:36 init_data.xml
[2025-06-04 14:06:59] drwxrwx--x 2 boinc boinc      4096 Jun  4 12:36 shared
[2025-06-04 14:06:59] -rw-r--r-- 2 boinc boinc    508875 Jun  4 12:36 input.tar.gz
[2025-06-04 14:06:59] -rw-r--r-- 2 boinc boinc     15093 Jun  4 12:36 start_atlas.sh
[2025-06-04 14:06:59] -rw-r--r-- 1 boinc boinc         0 Jun  4 12:36 boinc_lockfile
[2025-06-04 14:06:59] -rw-r--r-- 1 boinc boinc      2559 Jun  4 12:36 pandaJob.out
[2025-06-04 14:06:59] -rw------- 1 boinc boinc    986812 Jun  4 12:37 agis_schedconf.cvmfs.json
[2025-06-04 14:06:59] -rw------- 1 boinc boinc   1603667 Jun  4 12:37 agis_ddmendpoints.agis.ALL.json
[2025-06-04 14:06:59] drwx------ 4 boinc boinc      4096 Jun  4 12:37 pilot3
[2025-06-04 14:06:59] -rw------- 1 boinc boinc 198937003 Jun  4 14:06 HITS.44871837._090222.pool.root.1
[2025-06-04 14:06:59] -rw-r--r-- 1 boinc boinc       529 Jun  4 14:06 boinc_task_state.xml
[2025-06-04 14:06:59] -rw------- 1 boinc boinc        95 Jun  4 14:06 pilot_heartbeat.json
[2025-06-04 14:06:59] -rw------- 1 boinc boinc      1022 Jun  4 14:06 memory_monitor_summary.json
[2025-06-04 14:06:59] -rw------- 1 boinc boinc    240702 Jun  4 14:06 log.44871837._090222.job.log.tgz.1
[2025-06-04 14:06:59] -rw------- 1 boinc boinc      7671 Jun  4 14:06 heartbeat.json
[2025-06-04 14:06:59] -rw-r--r-- 1 boinc boinc        27 Jun  4 14:06 wrapper_checkpoint.txt
[2025-06-04 14:06:59] -rw-r--r-- 1 boinc boinc      8192 Jun  4 14:06 boinc_mmap_file
[2025-06-04 14:06:59] -rw------- 1 boinc boinc      4357 Jun  4 14:06 pilotlog.txt
[2025-06-04 14:06:59] -rw------- 1 boinc boinc    516282 Jun  4 14:06 log.44871837._090222.job.log.1
[2025-06-04 14:06:59] -rw------- 1 boinc boinc       357 Jun  4 14:06 output.list
[2025-06-04 14:06:59] -rw-r--r-- 1 boinc boinc       620 Jun  4 14:06 runtime_log
[2025-06-04 14:06:59] -rw------- 1 boinc boinc    778240 Jun  4 14:06 result.tar.gz
[2025-06-04 14:06:59] -rw-r--r-- 1 boinc boinc      8753 Jun  4 14:06 runtime_log.err
[2025-06-04 14:06:59] -rw------- 1 boinc boinc       662 Jun  4 14:06 CmfMDmJqce7n9Rq4apOajLDm4fhM0noT9bVof3QYDmS6TKDmO8LDLm.diag
[2025-06-04 14:06:59] -rw-r--r-- 1 boinc boinc     21408 Jun  4 14:06 stderr.txt
[2025-06-04 14:06:59] HITS file was successfully produced:
[2025-06-04 14:06:59] -rw------- 1 boinc boinc 198937003 Jun  4 14:06 shared/HITS.pool.root.1
[2025-06-04 14:06:59]  *** Contents of shared directory: ***
[2025-06-04 14:06:59] total 414356
[2025-06-04 14:06:59] -rw-r--r-- 2 boinc boinc 224043709 Jun  4 12:36 ATLAS.root_0
[2025-06-04 14:06:59] -rw-r--r-- 2 boinc boinc    508875 Jun  4 12:36 input.tar.gz
[2025-06-04 14:06:59] -rw-r--r-- 2 boinc boinc     15093 Jun  4 12:36 start_atlas.sh
[2025-06-04 14:06:59] -rw------- 1 boinc boinc 198937003 Jun  4 14:06 HITS.pool.root.1
[2025-06-04 14:06:59] -rw------- 1 boinc boinc    778240 Jun  4 14:06 result.tar.gz
14:07:00 (642781): run_atlas exited; CPU time 20401.658475
14:07:00 (642781): called boinc_finish(0)

</stderr_txt>
]]>

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