Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:58:25 (2128429): wrapper (7.7.26015): starting
21:58:25 (2128429): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 21:58:25] Arguments: --nthreads 8
[2025-06-03 21:58:25] Threads: 8
[2025-06-03 21:58:25] Checking for CVMFS
[2025-06-03 21:58:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 21:58:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 21:58:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 21:58:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 21:58:25] 2.12.6.0 863165 32169 478872 146763 0 451 31756469 40960001 17119 16776704 1 145811741 99.679 131855442 27653 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 21:58:25] CVMFS is ok
[2025-06-03 21:58:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 21:58:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 21:58:25] Further information can be found at the LHC@home message board.
[2025-06-03 21:58:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 21:58:25] Checking for apptainer binary...
[2025-06-03 21:58:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 21:58:25] Running /usr/bin/apptainer --version
[2025-06-03 21:58:25] apptainer version 1.4.1-1.el9
[2025-06-03 21:58:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 21:58:25] c7-11-14.aglt2.org
[2025-06-03 21:58:25] apptainer works
[2025-06-03 21:58:25] Set ATHENA_PROC_NUMBER=8
[2025-06-03 21:58:25] Set ATHENA_CORE_NUMBER=8
[2025-06-03 21:58:25] Starting ATLAS job with PandaID=6678074430
[2025-06-03 21:58:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 23:08:14]  *** The last 200 lines of the pilot log: ***
[2025-06-03 23:08:14]  is_tar=False
[2025-06-03 23:08:14]  lfn=log.45006595._045943.job.log.tgz.1
[2025-06-03 23:08:14]  mtime=0
[2025-06-03 23:08:14]  protocol_id=None
[2025-06-03 23:08:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 23:08:14]  replicas=None
[2025-06-03 23:08:14]  scope=mc23_13p6TeV
[2025-06-03 23:08:14]  status=None
[2025-06-03 23:08:14]  status_code=0
[2025-06-03 23:08:14]  storage_token=
[2025-06-03 23:08:14]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678074430/log.45006595._045943.job.log.tgz.1
[2025-06-03 23:08:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d9/a4/log.45006595._045943.job.log.tgz.1
[2025-06-03 23:08:14]  workdir=None
[2025-06-03 23:08:14] ]
[2025-06-03 23:08:14] 2025-06-04 03:07:45,007 | INFO     | transferring file log.45006595._045943.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678074430/log.45006595._045943.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 23:08:14] 2025-06-04 03:07:45,007 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678074430/log.45006595._045943.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._045943.job
[2025-06-03 23:08:14] 2025-06-04 03:07:45,030 | INFO     | adding to output.list: log.45006595._045943.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d9/a4/log.45006595._045943.job.log.tg
[2025-06-03 23:08:14] 2025-06-04 03:07:45,030 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 23:08:14] 2025-06-04 03:07:45,031 | INFO     | summary of transferred files:
[2025-06-03 23:08:14] 2025-06-04 03:07:45,031 | INFO     |  -- lfn=log.45006595._045943.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 23:08:14] 2025-06-04 03:07:45,031 | INFO     | stage-out finished correctly
[2025-06-03 23:08:14] 2025-06-04 03:07:45,699 | INFO     | PID=2132362 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 23:08:14] 2025-06-04 03:07:45,699 | INFO     | .. there are 32 such processes running
[2025-06-03 23:08:14] 2025-06-04 03:07:47,194 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 23:08:14] 2025-06-04 03:07:49,088 | WARNING  | process 2140943 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 23:08:14] 2025-06-04 03:07:49,088 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678074430/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 23:08:14] 2025-06-04 03:07:49,433 | INFO     | number of running child processes to parent process 2140943: 1
[2025-06-03 23:08:14] 2025-06-04 03:07:49,434 | INFO     | maximum number of monitored processes: 6
[2025-06-03 23:08:14] 2025-06-04 03:07:49,728 | INFO     | job 6678074430 has state=finished
[2025-06-03 23:08:14] 2025-06-04 03:07:49,728 | INFO     | preparing for final server update for job 6678074430 in state='finished'
[2025-06-03 23:08:14] 2025-06-04 03:07:49,729 | INFO     | this job has now completed (state=finished)
[2025-06-03 23:08:14] 2025-06-04 03:07:49,729 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 23:08:14] 2025-06-04 03:07:49,729 | INFO     | log transfer has been attempted: DONE
[2025-06-03 23:08:14] 2025-06-04 03:07:49,729 | INFO     | job 6678074430 has finished - writing final server update
[2025-06-03 23:08:14] 2025-06-04 03:07:49,729 | INFO     | total number of processed events: 400 (read)
[2025-06-03 23:08:14] 2025-06-04 03:07:49,746 | INFO     | executing command: lscpu
[2025-06-03 23:08:14] 2025-06-04 03:07:49,831 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 23:08:14] 2025-06-04 03:07:51,937 | INFO     | monitor loop #306: job 0:6678074430 is in state 'finished'
[2025-06-03 23:08:14] 2025-06-04 03:07:51,937 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 23:08:14] 2025-06-04 03:07:54,220 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 23:08:14] 2025-06-04 03:07:54,221 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678074430/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 23:08:14] 2025-06-04 03:07:54,222 | INFO     | extracted standard info from prmon json
[2025-06-03 23:08:14] 2025-06-04 03:07:54,222 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 23:08:14] 2025-06-04 03:07:54,222 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 23:08:14] 2025-06-04 03:07:54,222 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 23:08:14] 2025-06-04 03:07:54,222 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 23:08:14] 2025-06-04 03:07:54,224 | INFO     | fitting pss+swap vs Time
[2025-06-03 23:08:14] 2025-06-04 03:07:54,224 | INFO     | sum of square deviations: 70364110.0
[2025-06-03 23:08:14] 2025-06-04 03:07:54,224 | INFO     | sum of deviations: 6161405711.000001
[2025-06-03 23:08:14] 2025-06-04 03:07:54,224 | INFO     | mean x: 1749004478.0
[2025-06-03 23:08:14] 2025-06-04 03:07:54,225 | INFO     | mean y: 2150030.098360656
[2025-06-03 23:08:14] 2025-06-04 03:07:54,225 | INFO     | -- intersect: -153148741515.5174
[2025-06-03 23:08:14] 2025-06-04 03:07:54,225 | INFO     | intersect: -153148741515.5174
[2025-06-03 23:08:14] 2025-06-04 03:07:54,225 | INFO     | chi2: 0.7770296666668415
[2025-06-03 23:08:14] 2025-06-04 03:07:54,225 | INFO     | -- intersect: -153148741515.5174
[2025-06-03 23:08:14] 2025-06-04 03:07:54,225 | INFO     | current memory leak: 87.56 B/s (using 61 data points, chi2=0.78)
[2025-06-03 23:08:14] 2025-06-04 03:07:54,225 | INFO     | ..............................
[2025-06-03 23:08:14] 2025-06-04 03:07:54,226 | INFO     | . Timing measurements:
[2025-06-03 23:08:14] 2025-06-04 03:07:54,226 | INFO     | . get job = 0 s
[2025-06-03 23:08:14] 2025-06-04 03:07:54,226 | INFO     | . initial setup = 2 s
[2025-06-03 23:08:14] 2025-06-04 03:07:54,226 | INFO     | . payload setup = 6 s
[2025-06-03 23:08:14] 2025-06-04 03:07:54,226 | INFO     | . stage-in = 0 s
[2025-06-03 23:08:14] 2025-06-04 03:07:54,226 | INFO     | . payload execution = 4123 s
[2025-06-03 23:08:14] 2025-06-04 03:07:54,226 | INFO     | . stage-out = 0 s
[2025-06-03 23:08:14] 2025-06-04 03:07:54,226 | INFO     | . log creation = 0 s
[2025-06-03 23:08:14] 2025-06-04 03:07:54,226 | INFO     | ..............................
[2025-06-03 23:08:14] 2025-06-04 03:07:54,303 | INFO     | 
[2025-06-03 23:08:14] 2025-06-04 03:07:54,303 | INFO     | job summary report
[2025-06-03 23:08:14] 2025-06-04 03:07:54,303 | INFO     | --------------------------------------------------
[2025-06-03 23:08:14] 2025-06-04 03:07:54,303 | INFO     | PanDA job id: 6678074430
[2025-06-03 23:08:14] 2025-06-04 03:07:54,304 | INFO     | task id: 45006595
[2025-06-03 23:08:14] 2025-06-04 03:07:54,304 | INFO     | errors: (none)
[2025-06-03 23:08:14] 2025-06-04 03:07:54,304 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 23:08:14] 2025-06-04 03:07:54,304 | INFO     | pilot state: finished 
[2025-06-03 23:08:14] 2025-06-04 03:07:54,304 | INFO     | transexitcode: 0
[2025-06-03 23:08:14] 2025-06-04 03:07:54,304 | INFO     | exeerrorcode: 0
[2025-06-03 23:08:14] 2025-06-04 03:07:54,304 | INFO     | exeerrordiag: 
[2025-06-03 23:08:14] 2025-06-04 03:07:54,304 | INFO     | exitcode: 0
[2025-06-03 23:08:14] 2025-06-04 03:07:54,304 | INFO     | exitmsg: OK
[2025-06-03 23:08:14] 2025-06-04 03:07:54,304 | INFO     | cpuconsumptiontime: 27485 s
[2025-06-03 23:08:14] 2025-06-04 03:07:54,304 | INFO     | nevents: 400
[2025-06-03 23:08:14] 2025-06-04 03:07:54,304 | INFO     | neventsw: 0
[2025-06-03 23:08:14] 2025-06-04 03:07:54,304 | INFO     | pid: 2140943
[2025-06-03 23:08:14] 2025-06-04 03:07:54,304 | INFO     | pgrp: 2140943
[2025-06-03 23:08:14] 2025-06-04 03:07:54,304 | INFO     | corecount: 8
[2025-06-03 23:08:14] 2025-06-04 03:07:54,304 | INFO     | event service: False
[2025-06-03 23:08:14] 2025-06-04 03:07:54,305 | INFO     | sizes: {0: 2405183, 5: 2405389, 11: 2405445, 4133: 2431355, 4134: 2440296, 4136: 2440352, 4143: 2440650}
[2025-06-03 23:08:14] 2025-06-04 03:07:54,305 | INFO     | --------------------------------------------------
[2025-06-03 23:08:14] 2025-06-04 03:07:54,305 | INFO     | 
[2025-06-03 23:08:14] 2025-06-04 03:07:54,305 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-03 23:08:14] 2025-06-04 03:07:54,328 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 23:08:14] 2025-06-04 03:07:54,329 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 23:08:14] 2025-06-04 03:07:54,329 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 23:08:14] 2025-06-04 03:07:54,329 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 23:08:14] 2025-06-04 03:07:54,329 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 23:08:14] 2025-06-04 03:07:54,329 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 23:08:14] 2025-06-04 03:07:54,329 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 23:08:14] 2025-06-04 03:07:54,329 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 23:08:14] 2025-06-04 03:07:54,329 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 23:08:14] 2025-06-04 03:07:54,329 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 23:08:14] 2025-06-04 03:07:54,329 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 23:08:14] 2025-06-04 03:07:54,329 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 23:08:14] 2025-06-04 03:07:54,329 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 23:08:14] 2025-06-04 03:07:54,329 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 23:08:14] 2025-06-04 03:07:54,329 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 23:08:14] 2025-06-04 03:07:54,330 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 23:08:14] 2025-06-04 03:07:54,330 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 23:08:14] 2025-06-04 03:07:54,330 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 23:08:14] 2025-06-04 03:07:54,330 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 23:08:14] 2025-06-04 03:07:54,330 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 23:08:14] 2025-06-04 03:07:54,330 | INFO     | job 6678074430 has completed (purged errors)
[2025-06-03 23:08:14] 2025-06-04 03:07:54,330 | INFO     | overall cleanup function is called
[2025-06-03 23:08:14] 2025-06-04 03:07:55,335 | INFO     | --- collectZombieJob: --- 10, [2140943]
[2025-06-03 23:08:14] 2025-06-04 03:07:55,336 | INFO     | zombie collector waiting for pid 2140943
[2025-06-03 23:08:14] 2025-06-04 03:07:55,336 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 23:08:14] 2025-06-04 03:07:55,336 | INFO     | collected zombie processes
[2025-06-03 23:08:14] 2025-06-04 03:07:55,336 | INFO     | will attempt to kill all subprocesses of pid=2140943
[2025-06-03 23:08:14] 2025-06-04 03:07:55,686 | INFO     | process IDs to be killed: [2140943] (in reverse order)
[2025-06-03 23:08:14] 2025-06-04 03:07:55,816 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 23:08:14] 2025-06-04 03:07:55,817 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 23:08:14] 2025-06-04 03:07:55,833 | INFO     | did not find any defunct processes belonging to 2140943
[2025-06-03 23:08:14] 2025-06-04 03:07:55,848 | INFO     | did not find any defunct processes belonging to 2140943
[2025-06-03 23:08:14] 2025-06-04 03:07:55,849 | INFO     | ready for new job
[2025-06-03 23:08:14] 2025-06-04 03:07:55,849 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 23:08:14] 2025-06-04 03:07:55,851 | INFO     | **************************************
[2025-06-03 23:08:14] 2025-06-04 03:07:55,851 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 23:08:14] 2025-06-04 03:07:55,851 | INFO     | **************************************
[2025-06-03 23:08:14] 2025-06-04 03:07:55,851 | INFO     | 
[2025-06-03 23:08:14] 2025-06-04 03:07:55,868 | INFO     | architecture information:
[2025-06-03 23:08:14] 2025-06-04 03:07:55,868 | INFO     | executing command: cat /etc/os-release
[2025-06-03 23:08:14] 2025-06-04 03:07:55,888 | INFO     | cat /etc/os-release:
[2025-06-03 23:08:14] NAME="CentOS Linux"
[2025-06-03 23:08:14] VERSION="7 (Core)"
[2025-06-03 23:08:14] ID="centos"
[2025-06-03 23:08:14] ID_LIKE="rhel fedora"
[2025-06-03 23:08:14] VERSION_ID="7"
[2025-06-03 23:08:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 23:08:14] ANSI_COLOR="0;31"
[2025-06-03 23:08:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 23:08:14] HOME_URL="https://www.centos.org/"
[2025-06-03 23:08:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 23:08:14] 
[2025-06-03 23:08:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 23:08:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 23:08:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 23:08:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 23:08:14] 
[2025-06-03 23:08:14] 2025-06-04 03:07:55,888 | INFO     | **************************************
[2025-06-03 23:08:14] 2025-06-04 03:07:56,391 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-03 23:08:14] 2025-06-04 03:07:56,410 | INFO     | sufficient remaining disk space (85862645760 B)
[2025-06-03 23:08:14] 2025-06-04 03:07:56,411 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 23:08:14] 2025-06-04 03:07:56,411 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 23:08:14] 2025-06-04 03:07:56,411 | INFO     | update_server=False
[2025-06-03 23:08:14] 2025-06-04 03:07:56,411 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 23:08:14] 2025-06-04 03:07:56,411 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:08:14] 2025-06-04 03:07:56,411 | INFO     | aborting loop
[2025-06-03 23:08:14] 2025-06-04 03:07:56,411 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 23:08:14] 2025-06-04 03:07:56,412 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 23:08:14] 2025-06-04 03:07:56,412 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 23:08:14] 2025-06-04 03:07:56,412 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 23:08:14] 2025-06-04 03:07:56,412 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 23:08:14] 2025-06-04 03:07:56,778 | INFO     | all job control threads have been joined
[2025-06-03 23:08:14] 2025-06-04 03:07:57,354 | INFO     | all data control threads have been joined
[2025-06-03 23:08:14] 2025-06-04 03:07:57,416 | INFO     | [job] retrieve thread has finished
[2025-06-03 23:08:14] 2025-06-04 03:07:57,417 | INFO     | [job] job monitor thread has finished
[2025-06-03 23:08:14] 2025-06-04 03:07:57,783 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 23:08:14] 2025-06-04 03:07:57,784 | INFO     | [job] control thread has finished
[2025-06-03 23:08:14] 2025-06-04 03:07:57,869 | INFO     | all payload control threads have been joined
[2025-06-03 23:08:14] 2025-06-04 03:07:57,986 | INFO     | [job] validate thread has finished
[2025-06-03 23:08:14] 2025-06-04 03:07:58,231 | INFO     | [payload] validate_post thread has finished
[2025-06-03 23:08:14] 2025-06-04 03:07:58,316 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 23:08:14] 2025-06-04 03:07:58,359 | INFO     | [data] control thread has finished
[2025-06-03 23:08:14] 2025-06-04 03:07:58,373 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 23:08:14] 2025-06-04 03:07:58,417 | INFO     | [data] copytool_out thread has finished
[2025-06-03 23:08:14] 2025-06-04 03:07:58,613 | INFO     | [data] copytool_in thread has finished
[2025-06-03 23:08:14] 2025-06-04 03:07:58,730 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 23:08:14] 2025-06-04 03:07:58,871 | INFO     | [payload] control thread has finished
[2025-06-03 23:08:14] 2025-06-04 03:07:58,945 | INFO     | [payload] failed_post thread has finished
[2025-06-03 23:08:14] 2025-06-04 03:07:59,314 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:08:14] 2025-06-04 03:08:00,319 | INFO     | [job] queue monitor thread has finished
[2025-06-03 23:08:14] 2025-06-04 03:08:01,794 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 23:08:14] 2025-06-04 03:08:07,419 | INFO     | job.realtimelogging is not enabled
[2025-06-03 23:08:14] 2025-06-04 03:08:08,424 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 23:08:14] 2025-06-04 03:08:08,757 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140072338913088)>', '<ExcThread(monitor, started 140071986501376)>']
[2025-06-03 23:08:14] 2025-06-04 03:08:09,472 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 23:08:14] 2025-06-04 03:08:09,473 | INFO     | [monitor] control thread has ended
[2025-06-03 23:08:14] 2025-06-04 03:08:13,776 | INFO     | all workflow threads have been joined
[2025-06-03 23:08:14] 2025-06-04 03:08:13,777 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 23:08:14] 2025-06-04 03:08:13,777 | INFO     | traces error code: 0
[2025-06-03 23:08:14] 2025-06-04 03:08:13,778 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 23:08:14] 2025-06-04 03:08:13,937 [wrapper] ==== pilot stdout END ====
[2025-06-03 23:08:14] 2025-06-04 03:08:13,941 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 23:08:14] 2025-06-04 03:08:13,943 [wrapper] pilotpid: 2132362
[2025-06-03 23:08:14] 2025-06-04 03:08:13,945 [wrapper] Pilot exit status: 0
[2025-06-03 23:08:14] 2025-06-04 03:08:13,955 [wrapper] pandaids: 6678074430
[2025-06-03 23:08:14] 2025-06-04 03:08:14,048 [wrapper] cleanup supervisor_pilot 2558377 2132363
[2025-06-03 23:08:14] 2025-06-04 03:08:14,051 [wrapper] Test setup, not cleaning
[2025-06-03 23:08:14] 2025-06-04 03:08:14,053 [wrapper] apfmon messages muted
[2025-06-03 23:08:14] 2025-06-04 03:08:14,056 [wrapper] ==== wrapper stdout END ====
[2025-06-03 23:08:14] 2025-06-04 03:08:14,069 [wrapper] ==== wrapper stderr END ====
[2025-06-03 23:08:14]  *** Error codes and diagnostics ***
[2025-06-03 23:08:14]     "exeErrorCode": 0,
[2025-06-03 23:08:14]     "exeErrorDiag": "",
[2025-06-03 23:08:14]     "pilotErrorCode": 0,
[2025-06-03 23:08:14]     "pilotErrorDiag": "",
[2025-06-03 23:08:14]  *** Listing of results directory ***
[2025-06-03 23:08:14] total 391568
[2025-06-03 23:08:14] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 17:15 pilot3.tar.gz
[2025-06-03 23:08:14] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 17:27 queuedata.json
[2025-06-03 23:08:14] -rwx------. 1 boincer umatlas     37140 Jun  3 17:27 runpilot2-wrapper.sh
[2025-06-03 23:08:14] -rw-r--r--. 1 boincer umatlas       100 Jun  3 21:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 23:08:14] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 21:58 run_atlas
[2025-06-03 23:08:14] -rw-r--r--. 1 boincer umatlas       105 Jun  3 21:58 job.xml
[2025-06-03 23:08:14] -rw-r--r--. 2 boincer umatlas 214664949 Jun  3 21:58 EVNT.45006593._001843.pool.root.1
[2025-06-03 23:08:14] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 21:58 start_atlas.sh
[2025-06-03 23:08:14] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 21:58 shared
[2025-06-03 23:08:14] -rw-r--r--. 2 boincer umatlas    508880 Jun  3 21:58 input.tar.gz
[2025-06-03 23:08:14] -rw-r--r--. 1 boincer umatlas         0 Jun  3 21:58 boinc_lockfile
[2025-06-03 23:08:14] -rw-r--r--. 1 boincer umatlas      2524 Jun  3 21:58 pandaJob.out
[2025-06-03 23:08:14] -rw-------. 1 boincer umatlas    986077 Jun  3 21:58 agis_schedconf.cvmfs.json
[2025-06-03 23:08:14] -rw-------. 1 boincer umatlas   1603667 Jun  3 21:58 agis_ddmendpoints.agis.ALL.json
[2025-06-03 23:08:14] drwx------. 4 boincer umatlas      4096 Jun  3 21:58 pilot3
[2025-06-03 23:08:14] -rw-r--r--. 1 boincer umatlas      6896 Jun  3 23:00 init_data.xml
[2025-06-03 23:08:14] -rw-------. 1 boincer umatlas        95 Jun  3 23:07 pilot_heartbeat.json
[2025-06-03 23:08:14] -rw-------. 1 boincer umatlas 181040971 Jun  3 23:07 HITS.45006595._045943.pool.root.1
[2025-06-03 23:08:14] -rw-r--r--. 1 boincer umatlas       529 Jun  3 23:07 boinc_task_state.xml
[2025-06-03 23:08:14] -rw-------. 1 boincer umatlas      1027 Jun  3 23:07 memory_monitor_summary.json
[2025-06-03 23:08:14] -rw-------. 1 boincer umatlas    294988 Jun  3 23:07 log.45006595._045943.job.log.tgz.1
[2025-06-03 23:08:14] -rw-------. 1 boincer umatlas      7688 Jun  3 23:07 heartbeat.json
[2025-06-03 23:08:14] -rw-------. 1 boincer umatlas      4548 Jun  3 23:08 pilotlog.txt
[2025-06-03 23:08:14] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 23:08 boinc_mmap_file
[2025-06-03 23:08:14] -rw-------. 1 boincer umatlas    415807 Jun  3 23:08 log.45006595._045943.job.log.1
[2025-06-03 23:08:14] -rw-r--r--. 1 boincer umatlas        27 Jun  3 23:08 wrapper_checkpoint.txt
[2025-06-03 23:08:14] -rw-------. 1 boincer umatlas       357 Jun  3 23:08 output.list
[2025-06-03 23:08:14] -rw-r--r--. 1 boincer umatlas       620 Jun  3 23:08 runtime_log
[2025-06-03 23:08:14] -rw-------. 1 boincer umatlas    727040 Jun  3 23:08 result.tar.gz
[2025-06-03 23:08:14] -rw-r--r--. 1 boincer umatlas      8659 Jun  3 23:08 runtime_log.err
[2025-06-03 23:08:14] -rw-------. 1 boincer umatlas       651 Jun  3 23:08 0wjMDmOLog7n9Rq4apOajLDm4fhM0noT9bVof3QYDmkyZKDmETh1qn.diag
[2025-06-03 23:08:14] -rw-r--r--. 1 boincer umatlas     21575 Jun  3 23:08 stderr.txt
[2025-06-03 23:08:14] HITS file was successfully produced:
[2025-06-03 23:08:14] -rw-------. 1 boincer umatlas 181040971 Jun  3 23:07 shared/HITS.pool.root.1
[2025-06-03 23:08:14]  *** Contents of shared directory: ***
[2025-06-03 23:08:14] total 387672
[2025-06-03 23:08:14] -rw-r--r--. 2 boincer umatlas 214664949 Jun  3 21:58 ATLAS.root_0
[2025-06-03 23:08:14] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 21:58 start_atlas.sh
[2025-06-03 23:08:14] -rw-r--r--. 2 boincer umatlas    508880 Jun  3 21:58 input.tar.gz
[2025-06-03 23:08:14] -rw-------. 1 boincer umatlas 181040971 Jun  3 23:07 HITS.pool.root.1
[2025-06-03 23:08:14] -rw-------. 1 boincer umatlas    727040 Jun  3 23:08 result.tar.gz
23:08:16 (2128429): run_atlas exited; CPU time 27553.520751
23:08:16 (2128429): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN