Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
12:16:08 (1194071): wrapper (7.7.26015): starting
12:16:08 (1194071): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 12:16:08] Arguments: --nthreads 4
[2025-06-04 12:16:08] Threads: 4
[2025-06-04 12:16:08] Checking for CVMFS
[2025-06-04 12:16:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 12:16:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 12:16:08] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 12:16:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 12:16:08] 2.9.2.0 306136 2276 95536 146775 2 56 30985617 36864001 0 130560 0 2380657 99.994 594468 16661 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 12:16:08] CVMFS is ok
[2025-06-04 12:16:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 12:16:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 12:16:08] Further information can be found at the LHC@home message board.
[2025-06-04 12:16:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:16:08] Checking for apptainer binary...
[2025-06-04 12:16:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 12:16:08] Running /usr/bin/apptainer --version
[2025-06-04 12:16:08] apptainer version 1.3.6-6.1
[2025-06-04 12:16:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:16:08] thA334
[2025-06-04 12:16:08] apptainer works
[2025-06-04 12:16:08] Set ATHENA_PROC_NUMBER=4
[2025-06-04 12:16:08] Set ATHENA_CORE_NUMBER=4
[2025-06-04 12:16:08] Starting ATLAS job with PandaID=6678074692
[2025-06-04 12:16:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:22:04]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:22:04]  is_altstaged=None
[2025-06-04 13:22:04]  is_tar=False
[2025-06-04 13:22:04]  lfn=log.45006595._045979.job.log.tgz.1
[2025-06-04 13:22:04]  mtime=0
[2025-06-04 13:22:04]  protocol_id=None
[2025-06-04 13:22:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 13:22:04]  replicas=None
[2025-06-04 13:22:04]  scope=mc23_13p6TeV
[2025-06-04 13:22:04]  status=None
[2025-06-04 13:22:04]  status_code=0
[2025-06-04 13:22:04]  storage_token=
[2025-06-04 13:22:04]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6678074692/log.45006595._045979.job.log.tgz.1
[2025-06-04 13:22:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/13/42/log.45006595._045979.job.log.tgz.1
[2025-06-04 13:22:04]  workdir=None
[2025-06-04 13:22:04] ]
[2025-06-04 13:22:04] 2025-06-04 11:21:44,130 | INFO     | transferring file log.45006595._045979.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6678074692/log.45006595._045979.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 13:22:04] 2025-06-04 11:21:44,130 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6678074692/log.45006595._045979.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0459
[2025-06-04 13:22:04] 2025-06-04 11:21:44,148 | INFO     | adding to output.list: log.45006595._045979.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/13/42/log.45006595._045979.job.log.tg
[2025-06-04 13:22:04] 2025-06-04 11:21:44,148 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 13:22:04] 2025-06-04 11:21:44,148 | INFO     | summary of transferred files:
[2025-06-04 13:22:04] 2025-06-04 11:21:44,148 | INFO     |  -- lfn=log.45006595._045979.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 13:22:04] 2025-06-04 11:21:44,148 | INFO     | stage-out finished correctly
[2025-06-04 13:22:04] 2025-06-04 11:21:44,570 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 13:22:04] 2025-06-04 11:21:45,458 | WARNING  | process 1204416 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 13:22:04] 2025-06-04 11:21:45,458 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678074692/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:22:04] 2025-06-04 11:21:45,499 | INFO     | number of running child processes to parent process 1204416: 1
[2025-06-04 13:22:04] 2025-06-04 11:21:45,499 | INFO     | maximum number of monitored processes: 6
[2025-06-04 13:22:04] 2025-06-04 11:21:47,488 | INFO     | job 6678074692 has state=finished
[2025-06-04 13:22:04] 2025-06-04 11:21:47,488 | INFO     | preparing for final server update for job 6678074692 in state='finished'
[2025-06-04 13:22:04] 2025-06-04 11:21:47,488 | INFO     | this job has now completed (state=finished)
[2025-06-04 13:22:04] 2025-06-04 11:21:47,489 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 13:22:04] 2025-06-04 11:21:47,489 | INFO     | log transfer has been attempted: DONE
[2025-06-04 13:22:04] 2025-06-04 11:21:47,489 | INFO     | job 6678074692 has finished - writing final server update
[2025-06-04 13:22:04] 2025-06-04 11:21:47,489 | INFO     | total number of processed events: 400 (read)
[2025-06-04 13:22:04] 2025-06-04 11:21:47,490 | INFO     | executing command: lscpu
[2025-06-04 13:22:04] 2025-06-04 11:21:47,512 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 13:22:04] 2025-06-04 11:21:48,002 | INFO     | monitor loop #303: job 0:6678074692 is in state 'finished'
[2025-06-04 13:22:04] 2025-06-04 11:21:48,002 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:22:04] 2025-06-04 11:21:50,505 | INFO     | monitor loop #304: job 0:6678074692 is in state 'finished'
[2025-06-04 13:22:04] 2025-06-04 11:21:50,505 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:22:04] 2025-06-04 11:21:50,730 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 13:22:04] 2025-06-04 11:21:50,730 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678074692/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:22:04] 2025-06-04 11:21:50,730 | INFO     | extracted standard info from prmon json
[2025-06-04 13:22:04] 2025-06-04 11:21:50,730 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 13:22:04] 2025-06-04 11:21:50,730 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 13:22:04] 2025-06-04 11:21:50,731 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 13:22:04] 2025-06-04 11:21:50,731 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:22:04] 2025-06-04 11:21:50,731 | INFO     | fitting pss+swap vs Time
[2025-06-04 13:22:04] 2025-06-04 11:21:50,731 | INFO     | sum of square deviations: 57407588.0
[2025-06-04 13:22:04] 2025-06-04 11:21:50,731 | INFO     | sum of deviations: -1597285426.9999998
[2025-06-04 13:22:04] 2025-06-04 11:21:50,732 | INFO     | mean x: 1749034212.0
[2025-06-04 13:22:04] 2025-06-04 11:21:50,732 | INFO     | mean y: 2417690.1578947366
[2025-06-04 13:22:04] 2025-06-04 11:21:50,732 | INFO     | -- intersect: 48666835678.80477
[2025-06-04 13:22:04] 2025-06-04 11:21:50,732 | INFO     | intersect: 48666835678.80477
[2025-06-04 13:22:04] 2025-06-04 11:21:50,732 | INFO     | chi2: 0.041812860371102926
[2025-06-04 13:22:04] 2025-06-04 11:21:50,732 | INFO     | -- intersect: 48666835678.80477
[2025-06-04 13:22:04] 2025-06-04 11:21:50,732 | INFO     | current memory leak: -27.82 B/s (using 57 data points, chi2=0.04)
[2025-06-04 13:22:04] 2025-06-04 11:21:50,732 | INFO     | ..............................
[2025-06-04 13:22:04] 2025-06-04 11:21:50,732 | INFO     | . Timing measurements:
[2025-06-04 13:22:04] 2025-06-04 11:21:50,732 | INFO     | . get job = 0 s
[2025-06-04 13:22:04] 2025-06-04 11:21:50,732 | INFO     | . initial setup = 1 s
[2025-06-04 13:22:04] 2025-06-04 11:21:50,732 | INFO     | . payload setup = 4 s
[2025-06-04 13:22:04] 2025-06-04 11:21:50,732 | INFO     | . stage-in = 0 s
[2025-06-04 13:22:04] 2025-06-04 11:21:50,732 | INFO     | . payload execution = 3904 s
[2025-06-04 13:22:04] 2025-06-04 11:21:50,732 | INFO     | . stage-out = 0 s
[2025-06-04 13:22:04] 2025-06-04 11:21:50,732 | INFO     | . log creation = 0 s
[2025-06-04 13:22:04] 2025-06-04 11:21:50,732 | INFO     | ..............................
[2025-06-04 13:22:04] 2025-06-04 11:21:50,773 | INFO     | 
[2025-06-04 13:22:04] 2025-06-04 11:21:50,773 | INFO     | job summary report
[2025-06-04 13:22:04] 2025-06-04 11:21:50,773 | INFO     | --------------------------------------------------
[2025-06-04 13:22:04] 2025-06-04 11:21:50,773 | INFO     | PanDA job id: 6678074692
[2025-06-04 13:22:04] 2025-06-04 11:21:50,773 | INFO     | task id: 45006595
[2025-06-04 13:22:04] 2025-06-04 11:21:50,773 | INFO     | errors: (none)
[2025-06-04 13:22:04] 2025-06-04 11:21:50,773 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:22:04] 2025-06-04 11:21:50,773 | INFO     | pilot state: finished 
[2025-06-04 13:22:04] 2025-06-04 11:21:50,773 | INFO     | transexitcode: 0
[2025-06-04 13:22:04] 2025-06-04 11:21:50,773 | INFO     | exeerrorcode: 0
[2025-06-04 13:22:04] 2025-06-04 11:21:50,773 | INFO     | exeerrordiag: 
[2025-06-04 13:22:04] 2025-06-04 11:21:50,773 | INFO     | exitcode: 0
[2025-06-04 13:22:04] 2025-06-04 11:21:50,773 | INFO     | exitmsg: OK
[2025-06-04 13:22:04] 2025-06-04 11:21:50,774 | INFO     | cpuconsumptiontime: 14646 s
[2025-06-04 13:22:04] 2025-06-04 11:21:50,774 | INFO     | nevents: 400
[2025-06-04 13:22:04] 2025-06-04 11:21:50,774 | INFO     | neventsw: 0
[2025-06-04 13:22:04] 2025-06-04 11:21:50,774 | INFO     | pid: 1204416
[2025-06-04 13:22:04] 2025-06-04 11:21:50,774 | INFO     | pgrp: 1204416
[2025-06-04 13:22:04] 2025-06-04 11:21:50,774 | INFO     | corecount: 4
[2025-06-04 13:22:04] 2025-06-04 11:21:50,774 | INFO     | event service: False
[2025-06-04 13:22:04] 2025-06-04 11:21:50,774 | INFO     | sizes: {0: 2405187, 4: 2405393, 11: 2405421, 3913: 2431240, 3914: 2440187, 3915: 2440243, 3921: 2440541}
[2025-06-04 13:22:04] 2025-06-04 11:21:50,774 | INFO     | --------------------------------------------------
[2025-06-04 13:22:04] 2025-06-04 11:21:50,774 | INFO     | 
[2025-06-04 13:22:04] 2025-06-04 11:21:50,774 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 13:22:04] 2025-06-04 11:21:50,792 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:22:04] 2025-06-04 11:21:50,793 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:22:04] 2025-06-04 11:21:50,793 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:22:04] 2025-06-04 11:21:50,793 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:22:04] 2025-06-04 11:21:50,793 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:22:04] 2025-06-04 11:21:50,793 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:22:04] 2025-06-04 11:21:50,793 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:22:04] 2025-06-04 11:21:50,793 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:22:04] 2025-06-04 11:21:50,793 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:22:04] 2025-06-04 11:21:50,793 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:22:04] 2025-06-04 11:21:50,793 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:22:04] 2025-06-04 11:21:50,793 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:22:04] 2025-06-04 11:21:50,793 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:22:04] 2025-06-04 11:21:50,793 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:22:04] 2025-06-04 11:21:50,793 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:22:04] 2025-06-04 11:21:50,793 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:22:04] 2025-06-04 11:21:50,793 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:22:04] 2025-06-04 11:21:50,793 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:22:04] 2025-06-04 11:21:50,793 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:22:04] 2025-06-04 11:21:50,793 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:22:04] 2025-06-04 11:21:50,793 | INFO     | job 6678074692 has completed (purged errors)
[2025-06-04 13:22:04] 2025-06-04 11:21:50,793 | INFO     | overall cleanup function is called
[2025-06-04 13:22:04] 2025-06-04 11:21:51,797 | INFO     | --- collectZombieJob: --- 10, [1204416]
[2025-06-04 13:22:04] 2025-06-04 11:21:51,798 | INFO     | zombie collector waiting for pid 1204416
[2025-06-04 13:22:04] 2025-06-04 11:21:51,798 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:22:04] 2025-06-04 11:21:51,798 | INFO     | collected zombie processes
[2025-06-04 13:22:04] 2025-06-04 11:21:51,798 | INFO     | will attempt to kill all subprocesses of pid=1204416
[2025-06-04 13:22:04] 2025-06-04 11:21:51,843 | INFO     | process IDs to be killed: [1204416] (in reverse order)
[2025-06-04 13:22:04] 2025-06-04 11:21:51,875 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:22:04] 2025-06-04 11:21:51,875 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:22:04] 2025-06-04 11:21:51,877 | INFO     | did not find any defunct processes belonging to 1204416
[2025-06-04 13:22:04] 2025-06-04 11:21:51,878 | INFO     | did not find any defunct processes belonging to 1204416
[2025-06-04 13:22:04] 2025-06-04 11:21:51,878 | INFO     | ready for new job
[2025-06-04 13:22:04] 2025-06-04 11:21:51,878 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:22:04] 2025-06-04 11:21:51,879 | INFO     | **************************************
[2025-06-04 13:22:04] 2025-06-04 11:21:51,879 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:22:04] 2025-06-04 11:21:51,879 | INFO     | **************************************
[2025-06-04 13:22:04] 2025-06-04 11:21:51,879 | INFO     | 
[2025-06-04 13:22:04] 2025-06-04 11:21:51,879 | INFO     | architecture information:
[2025-06-04 13:22:04] 2025-06-04 11:21:51,880 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:22:04] 2025-06-04 11:21:51,893 | INFO     | cat /etc/os-release:
[2025-06-04 13:22:04] NAME="CentOS Linux"
[2025-06-04 13:22:04] VERSION="7 (Core)"
[2025-06-04 13:22:04] ID="centos"
[2025-06-04 13:22:04] ID_LIKE="rhel fedora"
[2025-06-04 13:22:04] VERSION_ID="7"
[2025-06-04 13:22:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:22:04] ANSI_COLOR="0;31"
[2025-06-04 13:22:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:22:04] HOME_URL="https://www.centos.org/"
[2025-06-04 13:22:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:22:04] 
[2025-06-04 13:22:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:22:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:22:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:22:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:22:04] 
[2025-06-04 13:22:04] 2025-06-04 11:21:51,893 | INFO     | **************************************
[2025-06-04 13:22:04] 2025-06-04 11:21:52,396 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 13:22:04] 2025-06-04 11:21:52,415 | INFO     | sufficient remaining disk space (224153042944 B)
[2025-06-04 13:22:05] 2025-06-04 11:21:52,415 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:22:05] 2025-06-04 11:21:52,415 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:22:05] 2025-06-04 11:21:52,415 | INFO     | update_server=False
[2025-06-04 13:22:05] 2025-06-04 11:21:52,415 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:22:05] 2025-06-04 11:21:52,416 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:22:05] 2025-06-04 11:21:52,416 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:22:05] 2025-06-04 11:21:52,416 | INFO     | aborting loop
[2025-06-04 13:22:05] 2025-06-04 11:21:52,416 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:22:05] 2025-06-04 11:21:52,662 | INFO     | PID=1197783 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 13:22:05] 2025-06-04 11:21:52,662 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:22:05] 2025-06-04 11:21:52,662 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:22:05] 2025-06-04 11:21:52,662 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:22:05] 2025-06-04 11:21:53,409 | INFO     | all data control threads have been joined
[2025-06-04 13:22:05] 2025-06-04 11:21:53,421 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:22:05] 2025-06-04 11:21:53,422 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:22:05] 2025-06-04 11:21:53,422 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:22:05] 2025-06-04 11:21:53,660 | INFO     | all payload control threads have been joined
[2025-06-04 13:22:05] 2025-06-04 11:21:53,907 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:22:05] 2025-06-04 11:21:54,017 | INFO     | all job control threads have been joined
[2025-06-04 13:22:05] 2025-06-04 11:21:54,026 | INFO     | [job] validate thread has finished
[2025-06-04 13:22:05] 2025-06-04 11:21:54,100 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:22:05] 2025-06-04 11:21:54,143 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:22:05] 2025-06-04 11:21:54,218 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:22:05] 2025-06-04 11:21:54,415 | INFO     | [data] control thread has finished
[2025-06-04 13:22:05] 2025-06-04 11:21:54,422 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:22:05] 2025-06-04 11:21:54,528 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:22:05] 2025-06-04 11:21:54,582 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:22:05] 2025-06-04 11:21:54,665 | INFO     | [payload] control thread has finished
[2025-06-04 13:22:05] 2025-06-04 11:21:54,836 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:22:05] 2025-06-04 11:21:55,023 | INFO     | [job] control thread has finished
[2025-06-04 13:22:05] 2025-06-04 11:21:55,122 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:22:05] 2025-06-04 11:21:59,130 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:22:05] 2025-06-04 11:21:59,792 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140516296558400)>', '<ExcThread(monitor, started 140515274118912)>']
[2025-06-04 13:22:05] 2025-06-04 11:22:00,704 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:22:05] 2025-06-04 11:22:00,704 | INFO     | [monitor] control thread has ended
[2025-06-04 13:22:05] 2025-06-04 11:22:04,818 | INFO     | all workflow threads have been joined
[2025-06-04 13:22:05] 2025-06-04 11:22:04,818 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:22:05] 2025-06-04 11:22:04,818 | INFO     | traces error code: 0
[2025-06-04 13:22:05] 2025-06-04 11:22:04,818 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:22:05] 2025-06-04 11:22:04,888 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:22:05] 2025-06-04 11:22:04,892 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:22:05] 2025-06-04 11:22:04,896 [wrapper] pilotpid: 1197783
[2025-06-04 13:22:05] 2025-06-04 11:22:04,900 [wrapper] Pilot exit status: 0
[2025-06-04 13:22:05] 2025-06-04 11:22:04,912 [wrapper] pandaids: 6678074692
[2025-06-04 13:22:05] 2025-06-04 11:22:04,933 [wrapper] cleanup supervisor_pilot 1214245 1197784
[2025-06-04 13:22:05] 2025-06-04 11:22:04,937 [wrapper] Test setup, not cleaning
[2025-06-04 13:22:05] 2025-06-04 11:22:04,941 [wrapper] apfmon messages muted
[2025-06-04 13:22:05] 2025-06-04 11:22:04,944 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:22:05] 2025-06-04 11:22:04,948 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:22:05]  *** Error codes and diagnostics ***
[2025-06-04 13:22:05]     "exeErrorCode": 0,
[2025-06-04 13:22:05]     "exeErrorDiag": "",
[2025-06-04 13:22:05]     "pilotErrorCode": 0,
[2025-06-04 13:22:05]     "pilotErrorDiag": "",
[2025-06-04 13:22:05]  *** Listing of results directory ***
[2025-06-04 13:22:05] total 394412
[2025-06-04 13:22:05] -rw-r--r-- 1 boinc boinc    495897 Jun  3 23:15 pilot3.tar.gz
[2025-06-04 13:22:05] -rwx------ 1 boinc boinc     37140 Jun  3 23:32 runpilot2-wrapper.sh
[2025-06-04 13:22:05] -rw-r--r-- 1 boinc boinc      5111 Jun  3 23:32 queuedata.json
[2025-06-04 13:22:05] -rw-r--r-- 1 boinc boinc       100 Jun  4 12:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:22:05] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 12:16 run_atlas
[2025-06-04 13:22:05] -rw-r--r-- 1 boinc boinc       105 Jun  4 12:16 job.xml
[2025-06-04 13:22:05] -rw-r--r-- 2 boinc boinc 214665502 Jun  4 12:16 EVNT.45006593._001844.pool.root.1
[2025-06-04 13:22:05] -rw-r--r-- 1 boinc boinc      6853 Jun  4 12:16 init_data.xml
[2025-06-04 13:22:05] drwxrwx--x 2 boinc boinc      4096 Jun  4 12:16 shared
[2025-06-04 13:22:05] -rw-r--r-- 2 boinc boinc    508878 Jun  4 12:16 input.tar.gz
[2025-06-04 13:22:05] -rw-r--r-- 2 boinc boinc     15093 Jun  4 12:16 start_atlas.sh
[2025-06-04 13:22:05] -rw-r--r-- 1 boinc boinc         0 Jun  4 12:16 boinc_lockfile
[2025-06-04 13:22:05] -rw-r--r-- 1 boinc boinc      2525 Jun  4 12:16 pandaJob.out
[2025-06-04 13:22:05] -rw------- 1 boinc boinc    986766 Jun  4 12:16 agis_schedconf.cvmfs.json
[2025-06-04 13:22:05] -rw------- 1 boinc boinc   1603667 Jun  4 12:16 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:22:05] drwx------ 4 boinc boinc      4096 Jun  4 12:16 pilot3
[2025-06-04 13:22:05] -rw------- 1 boinc boinc 184110742 Jun  4 13:21 HITS.45006595._045979.pool.root.1
[2025-06-04 13:22:05] -rw-r--r-- 1 boinc boinc       529 Jun  4 13:21 boinc_task_state.xml
[2025-06-04 13:22:05] -rw------- 1 boinc boinc        95 Jun  4 13:21 pilot_heartbeat.json
[2025-06-04 13:22:05] -rw------- 1 boinc boinc      1022 Jun  4 13:21 memory_monitor_summary.json
[2025-06-04 13:22:05] -rw------- 1 boinc boinc    241218 Jun  4 13:21 log.45006595._045979.job.log.tgz.1
[2025-06-04 13:22:05] -rw------- 1 boinc boinc      7656 Jun  4 13:21 heartbeat.json
[2025-06-04 13:22:05] -rw-r--r-- 1 boinc boinc      8192 Jun  4 13:21 boinc_mmap_file
[2025-06-04 13:22:05] -rw-r--r-- 1 boinc boinc        27 Jun  4 13:21 wrapper_checkpoint.txt
[2025-06-04 13:22:05] -rw------- 1 boinc boinc      4676 Jun  4 13:22 pilotlog.txt
[2025-06-04 13:22:05] -rw------- 1 boinc boinc    393171 Jun  4 13:22 log.45006595._045979.job.log.1
[2025-06-04 13:22:05] -rw------- 1 boinc boinc       357 Jun  4 13:22 output.list
[2025-06-04 13:22:05] -rw-r--r-- 1 boinc boinc       620 Jun  4 13:22 runtime_log
[2025-06-04 13:22:05] -rw------- 1 boinc boinc    655360 Jun  4 13:22 result.tar.gz
[2025-06-04 13:22:05] -rw-r--r-- 1 boinc boinc      8733 Jun  4 13:22 runtime_log.err
[2025-06-04 13:22:05] -rw------- 1 boinc boinc       658 Jun  4 13:22 6SJLDmHQog7n9Rq4apOajLDm4fhM0noT9bVof3QYDmEzZKDmPk4BNm.diag
[2025-06-04 13:22:05] -rw-r--r-- 1 boinc boinc     21521 Jun  4 13:22 stderr.txt
[2025-06-04 13:22:05] HITS file was successfully produced:
[2025-06-04 13:22:05] -rw------- 1 boinc boinc 184110742 Jun  4 13:21 shared/HITS.pool.root.1
[2025-06-04 13:22:05]  *** Contents of shared directory: ***
[2025-06-04 13:22:05] total 390596
[2025-06-04 13:22:05] -rw-r--r-- 2 boinc boinc 214665502 Jun  4 12:16 ATLAS.root_0
[2025-06-04 13:22:05] -rw-r--r-- 2 boinc boinc    508878 Jun  4 12:16 input.tar.gz
[2025-06-04 13:22:05] -rw-r--r-- 2 boinc boinc     15093 Jun  4 12:16 start_atlas.sh
[2025-06-04 13:22:05] -rw------- 1 boinc boinc 184110742 Jun  4 13:21 HITS.pool.root.1
[2025-06-04 13:22:05] -rw------- 1 boinc boinc    655360 Jun  4 13:22 result.tar.gz
13:22:06 (1194071): run_atlas exited; CPU time 14656.065830
13:22:06 (1194071): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN