Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
08:53:40 (835473): wrapper (7.7.26015): starting
08:53:40 (835473): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 08:53:40] Arguments: --nthreads 12
[2025-06-05 08:53:40] Threads: 12
[2025-06-05 08:53:40] Checking for CVMFS
[2025-06-05 08:53:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 08:53:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 08:53:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 08:53:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 08:53:44] 2.12.7.0 19605 2896 54212 146812 0 56 2948442 4096000 912 130560 0 2100427 99.989 712266 181 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 08:53:44] CVMFS is ok
[2025-06-05 08:53:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 08:53:44] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 08:53:44] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 08:53:44] Further information can be found at the LHC@home message board.
[2025-06-05 08:53:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 08:53:44] Checking for apptainer binary...
[2025-06-05 08:53:44] apptainer is not installed, using version from CVMFS
[2025-06-05 08:53:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 08:53:45] g630
[2025-06-05 08:53:45] apptainer works
[2025-06-05 08:53:45] Set ATHENA_PROC_NUMBER=12
[2025-06-05 08:53:45] Set ATHENA_CORE_NUMBER=12
[2025-06-05 08:53:45] Starting ATLAS job with PandaID=6678074424
[2025-06-05 08:53:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 13:33:04]  *** The last 200 lines of the pilot log: ***
[2025-06-05 13:33:04] 2025-06-05 13:32:43,288 | INFO     | PID=839054 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-06-05 13:33:04] 2025-06-05 13:32:43,288 | INFO     | .. there are 2 such processes running
[2025-06-05 13:33:04] 2025-06-05 13:32:43,644 | INFO     | monitor loop #1219: job 0:6678074424 is in state 'finished'
[2025-06-05 13:33:04] 2025-06-05 13:32:43,645 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 13:33:04] 2025-06-05 13:32:46,158 | INFO     | monitor loop #1220: job 0:6678074424 is in state 'finished'
[2025-06-05 13:33:04] 2025-06-05 13:32:46,158 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 13:33:04] 2025-06-05 13:32:48,666 | INFO     | monitor loop #1221: job 0:6678074424 is in state 'finished'
[2025-06-05 13:33:04] 2025-06-05 13:32:48,666 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 13:33:04] 2025-06-05 13:32:49,874 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-05 13:33:04] 2025-06-05 13:32:49,874 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6678074424/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 13:33:04] 2025-06-05 13:32:49,875 | INFO     | extracted standard info from prmon json
[2025-06-05 13:33:04] 2025-06-05 13:32:49,875 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 13:33:04] 2025-06-05 13:32:49,875 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 13:33:04] 2025-06-05 13:32:49,875 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 13:33:04] 2025-06-05 13:32:49,875 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 13:33:04] 2025-06-05 13:32:49,882 | INFO     | fitting pss+swap vs Time
[2025-06-05 13:33:04] 2025-06-05 13:32:49,883 | INFO     | sum of square deviations: 6103162416.799949
[2025-06-05 13:33:04] 2025-06-05 13:32:49,884 | INFO     | sum of deviations: 49385010915.199936
[2025-06-05 13:33:04] 2025-06-05 13:32:49,884 | INFO     | mean x: 1749122056.6
[2025-06-05 13:33:04] 2025-06-05 13:32:49,884 | INFO     | mean y: 2630571.4925925927
[2025-06-05 13:33:04] 2025-06-05 13:32:49,884 | INFO     | -- intersect: -14150755158.408976
[2025-06-05 13:33:04] 2025-06-05 13:32:49,884 | INFO     | intersect: -14150755158.408976
[2025-06-05 13:33:04] 2025-06-05 13:32:49,885 | INFO     | chi2: 3.6068741114639575
[2025-06-05 13:33:04] 2025-06-05 13:32:49,885 | INFO     | sum of square deviations: 5770336504.2490225
[2025-06-05 13:33:04] 2025-06-05 13:32:49,890 | INFO     | sum of deviations: 66668246129.59998
[2025-06-05 13:33:04] 2025-06-05 13:32:49,890 | INFO     | mean x: 1749121904.1018867
[2025-06-05 13:33:04] 2025-06-05 13:32:49,890 | INFO     | mean y: 2638365.2
[2025-06-05 13:33:04] 2025-06-05 13:32:49,890 | INFO     | -- intersect: -20206042623.763474
[2025-06-05 13:33:04] 2025-06-05 13:32:49,890 | INFO     | intersect: -20206042623.763474
[2025-06-05 13:33:04] 2025-06-05 13:32:49,891 | INFO     | chi2: 2.9132224093069787
[2025-06-05 13:33:04] 2025-06-05 13:32:49,891 | INFO     | current chi2=2.9132224093069787 (change=19.23138098866 %)
[2025-06-05 13:33:04] 2025-06-05 13:32:49,891 | INFO     | right removable region: 264
[2025-06-05 13:33:04] 2025-06-05 13:32:49,891 | INFO     | sum of square deviations: 5770320034.2490225
[2025-06-05 13:33:04] 2025-06-05 13:32:49,892 | INFO     | sum of deviations: -22578540735.169815
[2025-06-05 13:33:04] 2025-06-05 13:32:49,892 | INFO     | mean x: 1749122209.1018867
[2025-06-05 13:33:04] 2025-06-05 13:32:49,892 | INFO     | mean y: 2663424.3396226414
[2025-06-05 13:33:04] 2025-06-05 13:32:49,892 | INFO     | -- intersect: 6846759906.786619
[2025-06-05 13:33:04] 2025-06-05 13:32:49,892 | INFO     | intersect: 6846759906.786619
[2025-06-05 13:33:04] 2025-06-05 13:32:49,893 | INFO     | chi2: 1.0193925512836368
[2025-06-05 13:33:04] 2025-06-05 13:32:49,893 | INFO     | current chi2=1.0193925512836368 (change=71.73750677785962 %)
[2025-06-05 13:33:04] 2025-06-05 13:32:49,893 | INFO     | sum of square deviations: 5449803464.19617
[2025-06-05 13:33:04] 2025-06-05 13:32:49,898 | INFO     | sum of deviations: -36544611236.9731
[2025-06-05 13:33:04] 2025-06-05 13:32:49,898 | INFO     | mean x: 1749122361.603846
[2025-06-05 13:33:04] 2025-06-05 13:32:49,898 | INFO     | mean y: 2670041.573076923
[2025-06-05 13:33:04] 2025-06-05 13:32:49,898 | INFO     | -- intersect: 11731716259.59793
[2025-06-05 13:33:04] 2025-06-05 13:32:49,898 | INFO     | intersect: 11731716259.59793
[2025-06-05 13:33:04] 2025-06-05 13:32:49,899 | INFO     | chi2: 0.9052413775315351
[2025-06-05 13:33:04] 2025-06-05 13:32:49,899 | INFO     | current chi2=0.9052413775315351 (change=11.197960354758386 %)
[2025-06-05 13:33:04] 2025-06-05 13:32:49,899 | INFO     | left removable region: 20
[2025-06-05 13:33:04] 2025-06-05 13:32:49,899 | INFO     | sum of square deviations: 4504290776.012293
[2025-06-05 13:33:04] 2025-06-05 13:32:49,900 | INFO     | sum of deviations: -2652531108.6024575
[2025-06-05 13:33:04] 2025-06-05 13:32:49,900 | INFO     | mean x: 1749122483.6106558
[2025-06-05 13:33:04] 2025-06-05 13:32:49,900 | INFO     | mean y: 2670568.0778688523
[2025-06-05 13:33:04] 2025-06-05 13:32:49,900 | INFO     | -- intersect: 1032711040.873623
[2025-06-05 13:33:04] 2025-06-05 13:32:49,900 | INFO     | intersect: 1032711040.873623
[2025-06-05 13:33:04] 2025-06-05 13:32:49,901 | INFO     | chi2: 0.0950596887939304
[2025-06-05 13:33:04] 2025-06-05 13:32:49,901 | INFO     | -- intersect: 1032711040.873623
[2025-06-05 13:33:04] 2025-06-05 13:32:49,901 | INFO     | current memory leak: -0.59 B/s (using 244 data points, chi2=0.10)
[2025-06-05 13:33:04] 2025-06-05 13:32:49,901 | INFO     | ..............................
[2025-06-05 13:33:04] 2025-06-05 13:32:49,901 | INFO     | . Timing measurements:
[2025-06-05 13:33:04] 2025-06-05 13:32:49,901 | INFO     | . get job = 0 s
[2025-06-05 13:33:04] 2025-06-05 13:32:49,901 | INFO     | . initial setup = 2 s
[2025-06-05 13:33:04] 2025-06-05 13:32:49,901 | INFO     | . payload setup = 61 s
[2025-06-05 13:33:04] 2025-06-05 13:32:49,901 | INFO     | . stage-in = 0 s
[2025-06-05 13:33:04] 2025-06-05 13:32:49,902 | INFO     | . payload execution = 16486 s
[2025-06-05 13:33:04] 2025-06-05 13:32:49,902 | INFO     | . stage-out = 2 s
[2025-06-05 13:33:04] 2025-06-05 13:32:49,902 | INFO     | . log creation = 0 s
[2025-06-05 13:33:04] 2025-06-05 13:32:49,902 | INFO     | ..............................
[2025-06-05 13:33:04] 2025-06-05 13:32:50,434 | INFO     | 
[2025-06-05 13:33:04] 2025-06-05 13:32:50,434 | INFO     | job summary report
[2025-06-05 13:33:04] 2025-06-05 13:32:50,434 | INFO     | --------------------------------------------------
[2025-06-05 13:33:04] 2025-06-05 13:32:50,434 | INFO     | PanDA job id: 6678074424
[2025-06-05 13:33:04] 2025-06-05 13:32:50,434 | INFO     | task id: 45006595
[2025-06-05 13:33:04] 2025-06-05 13:32:50,434 | INFO     | errors: (none)
[2025-06-05 13:33:04] 2025-06-05 13:32:50,435 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 13:33:04] 2025-06-05 13:32:50,435 | INFO     | pilot state: finished 
[2025-06-05 13:33:04] 2025-06-05 13:32:50,435 | INFO     | transexitcode: 0
[2025-06-05 13:33:04] 2025-06-05 13:32:50,435 | INFO     | exeerrorcode: 0
[2025-06-05 13:33:04] 2025-06-05 13:32:50,435 | INFO     | exeerrordiag: 
[2025-06-05 13:33:04] 2025-06-05 13:32:50,435 | INFO     | exitcode: 0
[2025-06-05 13:33:04] 2025-06-05 13:32:50,435 | INFO     | exitmsg: OK
[2025-06-05 13:33:04] 2025-06-05 13:32:50,435 | INFO     | cpuconsumptiontime: 31381 s
[2025-06-05 13:33:04] 2025-06-05 13:32:50,435 | INFO     | nevents: 400
[2025-06-05 13:33:04] 2025-06-05 13:32:50,435 | INFO     | neventsw: 0
[2025-06-05 13:33:04] 2025-06-05 13:32:50,435 | INFO     | pid: 845476
[2025-06-05 13:33:04] 2025-06-05 13:32:50,435 | INFO     | pgrp: 845476
[2025-06-05 13:33:04] 2025-06-05 13:32:50,435 | INFO     | corecount: 12
[2025-06-05 13:33:04] 2025-06-05 13:32:50,435 | INFO     | event service: False
[2025-06-05 13:33:04] 2025-06-05 13:32:50,435 | INFO     | sizes: {0: 2397191, 1: 2397390, 12: 2397390, 23: 2397418, 34: 2397680, 45: 2397680, 16551: 2428722, 16554: 2437765, 16607: 2437879}
[2025-06-05 13:33:04] 2025-06-05 13:32:50,435 | INFO     | --------------------------------------------------
[2025-06-05 13:33:04] 2025-06-05 13:32:50,436 | INFO     | 
[2025-06-05 13:33:04] 2025-06-05 13:32:50,436 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-06-05 13:33:04] 2025-06-05 13:32:50,618 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 13:33:04] 2025-06-05 13:32:50,618 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 13:33:04] 2025-06-05 13:32:50,618 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 13:33:04] 2025-06-05 13:32:50,618 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 13:33:04] 2025-06-05 13:32:50,619 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 13:33:04] 2025-06-05 13:32:50,619 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 13:33:04] 2025-06-05 13:32:50,619 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 13:33:04] 2025-06-05 13:32:50,619 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 13:33:04] 2025-06-05 13:32:50,619 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 13:33:04] 2025-06-05 13:32:50,619 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 13:33:04] 2025-06-05 13:32:50,619 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 13:33:04] 2025-06-05 13:32:50,619 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 13:33:04] 2025-06-05 13:32:50,619 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 13:33:04] 2025-06-05 13:32:50,619 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 13:33:04] 2025-06-05 13:32:50,619 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 13:33:04] 2025-06-05 13:32:50,619 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 13:33:04] 2025-06-05 13:32:50,619 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 13:33:04] 2025-06-05 13:32:50,619 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 13:33:04] 2025-06-05 13:32:50,620 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 13:33:04] 2025-06-05 13:32:50,620 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 13:33:04] 2025-06-05 13:32:50,620 | INFO     | job 6678074424 has completed (purged errors)
[2025-06-05 13:33:04] 2025-06-05 13:32:50,620 | INFO     | overall cleanup function is called
[2025-06-05 13:33:04] 2025-06-05 13:32:51,626 | INFO     | --- collectZombieJob: --- 10, [845476]
[2025-06-05 13:33:04] 2025-06-05 13:32:51,626 | INFO     | zombie collector waiting for pid 845476
[2025-06-05 13:33:04] 2025-06-05 13:32:51,626 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 13:33:04] 2025-06-05 13:32:51,626 | INFO     | collected zombie processes
[2025-06-05 13:33:04] 2025-06-05 13:32:51,626 | INFO     | will attempt to kill all subprocesses of pid=845476
[2025-06-05 13:33:04] 2025-06-05 13:32:51,794 | INFO     | process IDs to be killed: [845476] (in reverse order)
[2025-06-05 13:33:04] 2025-06-05 13:32:52,043 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 13:33:04] 2025-06-05 13:32:52,043 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 13:33:04] 2025-06-05 13:32:52,044 | INFO     | did not find any defunct processes belonging to 845476
[2025-06-05 13:33:04] 2025-06-05 13:32:52,045 | INFO     | did not find any defunct processes belonging to 845476
[2025-06-05 13:33:04] 2025-06-05 13:32:52,045 | INFO     | ready for new job
[2025-06-05 13:33:04] 2025-06-05 13:32:52,045 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 13:33:04] 2025-06-05 13:32:52,058 | INFO     | **************************************
[2025-06-05 13:33:04] 2025-06-05 13:32:52,059 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 13:33:04] 2025-06-05 13:32:52,059 | INFO     | **************************************
[2025-06-05 13:33:04] 2025-06-05 13:32:52,059 | INFO     | 
[2025-06-05 13:33:04] 2025-06-05 13:32:52,078 | INFO     | architecture information:
[2025-06-05 13:33:04] 2025-06-05 13:32:52,090 | INFO     | executing command: cat /etc/os-release
[2025-06-05 13:33:04] 2025-06-05 13:32:52,194 | INFO     | cat /etc/os-release:
[2025-06-05 13:33:04] NAME="CentOS Linux"
[2025-06-05 13:33:04] VERSION="7 (Core)"
[2025-06-05 13:33:04] ID="centos"
[2025-06-05 13:33:04] ID_LIKE="rhel fedora"
[2025-06-05 13:33:04] VERSION_ID="7"
[2025-06-05 13:33:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 13:33:04] ANSI_COLOR="0;31"
[2025-06-05 13:33:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 13:33:04] HOME_URL="https://www.centos.org/"
[2025-06-05 13:33:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 13:33:04] 
[2025-06-05 13:33:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 13:33:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 13:33:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 13:33:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 13:33:04] 
[2025-06-05 13:33:04] 2025-06-05 13:32:52,194 | INFO     | **************************************
[2025-06-05 13:33:04] 2025-06-05 13:32:52,698 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-06-05 13:33:04] 2025-06-05 13:32:52,804 | INFO     | sufficient remaining disk space (180858388480 B)
[2025-06-05 13:33:04] 2025-06-05 13:32:52,804 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 13:33:04] 2025-06-05 13:32:52,804 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 13:33:04] 2025-06-05 13:32:52,804 | INFO     | update_server=False
[2025-06-05 13:33:04] 2025-06-05 13:32:52,804 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 13:33:04] 2025-06-05 13:32:52,806 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:33:04] 2025-06-05 13:32:52,806 | INFO     | aborting loop
[2025-06-05 13:33:04] 2025-06-05 13:32:52,810 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 13:33:04] 2025-06-05 13:32:52,922 | INFO     | all data control threads have been joined
[2025-06-05 13:33:04] 2025-06-05 13:32:53,014 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 13:33:04] 2025-06-05 13:32:53,146 | INFO     | all payload control threads have been joined
[2025-06-05 13:33:04] 2025-06-05 13:32:53,330 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 13:33:04] 2025-06-05 13:32:53,330 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 13:33:04] 2025-06-05 13:32:53,330 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 13:33:04] 2025-06-05 13:32:53,646 | INFO     | all job control threads have been joined
[2025-06-05 13:33:04] 2025-06-05 13:32:53,806 | INFO     | [job] retrieve thread has finished
[2025-06-05 13:33:04] 2025-06-05 13:32:53,810 | INFO     | [job] job monitor thread has finished
[2025-06-05 13:33:04] 2025-06-05 13:32:53,926 | INFO     | [data] control thread has finished
[2025-06-05 13:33:04] 2025-06-05 13:32:53,998 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 13:33:04] 2025-06-05 13:32:54,150 | INFO     | [payload] control thread has finished
[2025-06-05 13:33:04] 2025-06-05 13:32:54,182 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 13:33:04] 2025-06-05 13:32:54,290 | INFO     | [payload] failed_post thread has finished
[2025-06-05 13:33:04] 2025-06-05 13:32:54,446 | INFO     | [job] validate thread has finished
[2025-06-05 13:33:04] 2025-06-05 13:32:54,466 | INFO     | [data] copytool_in thread has finished
[2025-06-05 13:33:04] 2025-06-05 13:32:54,654 | INFO     | [job] control thread has finished
[2025-06-05 13:33:04] 2025-06-05 13:32:54,682 | INFO     | [payload] validate_post thread has finished
[2025-06-05 13:33:04] 2025-06-05 13:32:54,822 | INFO     | [data] copytool_out thread has finished
[2025-06-05 13:33:04] 2025-06-05 13:32:54,854 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 13:33:04] 2025-06-05 13:32:55,078 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 13:33:04] 2025-06-05 13:32:55,266 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 13:33:04] 2025-06-05 13:32:56,082 | INFO     | [job] queue monitor thread has finished
[2025-06-05 13:33:04] 2025-06-05 13:32:57,030 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 13:33:04] 2025-06-05 13:32:57,874 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140335905331008)>', '<ExcThread(monitor, started 140335606904576)>']
[2025-06-05 13:33:04] 2025-06-05 13:32:58,354 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 13:33:04] 2025-06-05 13:32:58,354 | INFO     | [monitor] control thread has ended
[2025-06-05 13:33:04] 2025-06-05 13:33:02,906 | INFO     | all workflow threads have been joined
[2025-06-05 13:33:04] 2025-06-05 13:33:02,907 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 13:33:04] 2025-06-05 13:33:02,907 | INFO     | traces error code: 0
[2025-06-05 13:33:04] 2025-06-05 13:33:02,907 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 13:33:04] 2025-06-05 13:33:03,262 [wrapper] ==== pilot stdout END ====
[2025-06-05 13:33:04] 2025-06-05 13:33:03,310 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 13:33:04] 2025-06-05 13:33:03,350 [wrapper] pilotpid: 839054
[2025-06-05 13:33:04] 2025-06-05 13:33:03,394 [wrapper] Pilot exit status: 0
[2025-06-05 13:33:04] 2025-06-05 13:33:03,558 [wrapper] pandaids: 6678074424
[2025-06-05 13:33:04] 2025-06-05 13:33:03,686 [wrapper] cleanup supervisor_pilot  909940 839055
[2025-06-05 13:33:04] 2025-06-05 13:33:03,710 [wrapper] Test setup, not cleaning
[2025-06-05 13:33:04] 2025-06-05 13:33:03,738 [wrapper] apfmon messages muted
[2025-06-05 13:33:04] 2025-06-05 13:33:03,767 [wrapper] ==== wrapper stdout END ====
[2025-06-05 13:33:04] 2025-06-05 13:33:03,826 [wrapper] ==== wrapper stderr END ====
[2025-06-05 13:33:04]  *** Error codes and diagnostics ***
[2025-06-05 13:33:04]     "exeErrorCode": 0,
[2025-06-05 13:33:04]     "exeErrorDiag": "",
[2025-06-05 13:33:04]     "pilotErrorCode": 0,
[2025-06-05 13:33:04]     "pilotErrorDiag": "",
[2025-06-05 13:33:04]  *** Listing of results directory ***
[2025-06-05 13:33:04] total 390868
[2025-06-05 13:33:04] -rw-r--r-- 1 boinc boinc    495897 Jun  3 21:15 pilot3.tar.gz
[2025-06-05 13:33:04] -rw-r--r-- 1 boinc boinc      5111 Jun  3 21:27 queuedata.json
[2025-06-05 13:33:04] -rwx------ 1 boinc boinc     37140 Jun  3 21:27 runpilot2-wrapper.sh
[2025-06-05 13:33:04] -rw-rw-r-- 1 boinc boinc       100 Jun  5 08:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 13:33:04] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 08:53 run_atlas
[2025-06-05 13:33:04] -rw-rw-r-- 1 boinc boinc       105 Jun  5 08:53 job.xml
[2025-06-05 13:33:04] -rw-r--r-- 2 boinc boinc     15093 Jun  5 08:53 start_atlas.sh
[2025-06-05 13:33:04] drwxrwx--x 2 boinc boinc      4096 Jun  5 08:53 shared
[2025-06-05 13:33:04] -rw-r--r-- 2 boinc boinc    508878 Jun  5 08:53 input.tar.gz
[2025-06-05 13:33:04] -rw-rw-r-- 1 boinc boinc      9280 Jun  5 08:53 init_data.xml
[2025-06-05 13:33:04] -rw-r--r-- 2 boinc boinc 214664949 Jun  5 08:53 EVNT.45006593._001843.pool.root.1
[2025-06-05 13:33:04] -rw-rw-r-- 1 boinc boinc         0 Jun  5 08:53 boinc_lockfile
[2025-06-05 13:33:04] -rw-rw-r-- 1 boinc boinc      2523 Jun  5 08:53 pandaJob.out
[2025-06-05 13:33:04] -rw------- 1 boinc boinc    983281 Jun  5 08:54 agis_schedconf.cvmfs.json
[2025-06-05 13:33:04] drwx------ 4 boinc boinc      4096 Jun  5 08:54 pilot3
[2025-06-05 13:33:04] -rw------- 1 boinc boinc 177772073 Jun  5 13:30 HITS.45006595._045937.pool.root.1
[2025-06-05 13:33:04] -rw-rw-r-- 1 boinc boinc       530 Jun  5 13:30 boinc_task_state.xml
[2025-06-05 13:33:04] -rw------- 1 boinc boinc      1020 Jun  5 13:31 memory_monitor_summary.json
[2025-06-05 13:33:04] -rw------- 1 boinc boinc   1598969 Jun  5 13:31 agis_ddmendpoints.agis.ALL.json
[2025-06-05 13:33:04] -rw------- 1 boinc boinc    457909 Jun  5 13:31 log.45006595._045937.job.log.tgz.1
[2025-06-05 13:33:04] -rw------- 1 boinc boinc        95 Jun  5 13:32 pilot_heartbeat.json
[2025-06-05 13:33:04] -rw-rw-r-- 1 boinc boinc        28 Jun  5 13:32 wrapper_checkpoint.txt
[2025-06-05 13:33:04] -rw-rw-r-- 1 boinc boinc      8192 Jun  5 13:32 boinc_mmap_file
[2025-06-05 13:33:04] -rw------- 1 boinc boinc      7655 Jun  5 13:32 heartbeat.json
[2025-06-05 13:33:04] -rw------- 1 boinc boinc      4377 Jun  5 13:33 pilotlog.txt
[2025-06-05 13:33:04] -rw------- 1 boinc boinc   1528443 Jun  5 13:33 log.45006595._045937.job.log.1
[2025-06-05 13:33:04] -rw------- 1 boinc boinc       357 Jun  5 13:33 output.list
[2025-06-05 13:33:04] -rw-rw-r-- 1 boinc boinc       620 Jun  5 13:33 runtime_log
[2025-06-05 13:33:04] -rw------- 1 boinc boinc   2007040 Jun  5 13:33 result.tar.gz
[2025-06-05 13:33:04] -rw-rw-r-- 1 boinc boinc      8944 Jun  5 13:33 runtime_log.err
[2025-06-05 13:33:04] -rw------- 1 boinc boinc       652 Jun  5 13:33 gXaMDmOLog7n9Rq4apOajLDm4fhM0noT9bVof3QYDmeyZKDmnRf84n.diag
[2025-06-05 13:33:04] -rw-rw-r-- 1 boinc boinc     21376 Jun  5 13:33 stderr.txt
[2025-06-05 13:33:04] HITS file was successfully produced:
[2025-06-05 13:33:04] -rw------- 1 boinc boinc 177772073 Jun  5 13:30 shared/HITS.pool.root.1
[2025-06-05 13:33:04]  *** Contents of shared directory: ***
[2025-06-05 13:33:04] total 385728
[2025-06-05 13:33:04] -rw-r--r-- 2 boinc boinc     15093 Jun  5 08:53 start_atlas.sh
[2025-06-05 13:33:04] -rw-r--r-- 2 boinc boinc    508878 Jun  5 08:53 input.tar.gz
[2025-06-05 13:33:04] -rw-r--r-- 2 boinc boinc 214664949 Jun  5 08:53 ATLAS.root_0
[2025-06-05 13:33:04] -rw------- 1 boinc boinc 177772073 Jun  5 13:30 HITS.pool.root.1
[2025-06-05 13:33:04] -rw------- 1 boinc boinc   2007040 Jun  5 13:33 result.tar.gz
13:33:05 (835473): run_atlas exited; CPU time 31462.928198
13:33:05 (835473): called boinc_finish(0)

</stderr_txt>
]]>

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