Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:48:30 (176904): wrapper (7.7.26015): starting
13:48:30 (176904): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 13:48:30] Arguments: --nthreads 4
[2025-06-05 13:48:30] Threads: 4
[2025-06-05 13:48:30] Checking for CVMFS
[2025-06-05 13:48:30] No cvmfs_config command found, will try listing directly
[2025-06-05 13:48:30] CVMFS is ok
[2025-06-05 13:48:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 13:48:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 13:48:30] Further information can be found at the LHC@home message board.
[2025-06-05 13:48:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 13:48:30] Checking for apptainer binary...
[2025-06-05 13:48:30] which: no apptainer in ((null))
[2025-06-05 13:48:30] apptainer is not installed, using version from CVMFS
[2025-06-05 13:48:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 13:48:30] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-06-05 13:48:30] apptainer works
[2025-06-05 13:48:30] Set ATHENA_PROC_NUMBER=4
[2025-06-05 13:48:30] Set ATHENA_CORE_NUMBER=4
[2025-06-05 13:48:30] Starting ATLAS job with PandaID=6678074375
[2025-06-05 13:48:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 16:14:40]  *** The last 200 lines of the pilot log: ***
[2025-06-05 16:14:40] 2025-06-05 14:14:16,263 | INFO     | executing command: lscpu
[2025-06-05 16:14:40] 2025-06-05 14:14:16,376 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 16:14:40] 2025-06-05 14:14:20,889 | WARNING  | process 188216 can no longer be monitored (due to stat problems) - aborting
[2025-06-05 16:14:40] 2025-06-05 14:14:20,890 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6678074375/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 16:14:40] 2025-06-05 14:14:21,529 | INFO     | number of running child processes to parent process 188216: 1
[2025-06-05 16:14:40] 2025-06-05 14:14:21,529 | INFO     | maximum number of monitored processes: 6
[2025-06-05 16:14:40] 2025-06-05 14:14:22,522 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 16:14:40] 2025-06-05 14:14:22,522 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6678074375/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 16:14:40] 2025-06-05 14:14:22,523 | INFO     | extracted standard info from prmon json
[2025-06-05 16:14:40] 2025-06-05 14:14:22,523 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 16:14:40] 2025-06-05 14:14:22,523 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 16:14:40] 2025-06-05 14:14:22,524 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 16:14:40] 2025-06-05 14:14:22,524 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 16:14:40] 2025-06-05 14:14:22,527 | INFO     | fitting pss+swap vs Time
[2025-06-05 16:14:40] 2025-06-05 14:14:22,527 | INFO     | sum of square deviations: 906703512.0
[2025-06-05 16:14:40] 2025-06-05 14:14:22,528 | INFO     | sum of deviations: 11438956008.999998
[2025-06-05 16:14:40] 2025-06-05 14:14:22,528 | INFO     | mean x: 1749128488.0
[2025-06-05 16:14:40] 2025-06-05 14:14:22,529 | INFO     | mean y: 2315536.6573426574
[2025-06-05 16:14:40] 2025-06-05 14:14:22,529 | INFO     | -- intersect: -22064659569.88739
[2025-06-05 16:14:40] 2025-06-05 14:14:22,529 | INFO     | intersect: -22064659569.88739
[2025-06-05 16:14:40] 2025-06-05 14:14:22,529 | INFO     | chi2: 1.7513598991014105
[2025-06-05 16:14:40] 2025-06-05 14:14:22,529 | INFO     | sum of square deviations: 814878534.5
[2025-06-05 16:14:40] 2025-06-05 14:14:22,530 | INFO     | sum of deviations: 11098098836.499996
[2025-06-05 16:14:40] 2025-06-05 14:14:22,530 | INFO     | mean x: 1749128335.5
[2025-06-05 16:14:40] 2025-06-05 14:14:22,530 | INFO     | mean y: 2314970.34057971
[2025-06-05 16:14:40] 2025-06-05 14:14:22,530 | INFO     | -- intersect: -23819639251.355423
[2025-06-05 16:14:40] 2025-06-05 14:14:22,531 | INFO     | intersect: -23819639251.355423
[2025-06-05 16:14:40] 2025-06-05 14:14:22,531 | INFO     | chi2: 1.7538552370515277
[2025-06-05 16:14:40] 2025-06-05 14:14:22,531 | INFO     | current chi2=1.7538552370515277 (change=-0.14248002089104864 %)
[2025-06-05 16:14:40] 2025-06-05 14:14:22,531 | INFO     | right removable region: 137
[2025-06-05 16:14:40] 2025-06-05 14:14:22,531 | INFO     | sum of square deviations: 814878534.5
[2025-06-05 16:14:40] 2025-06-05 14:14:22,532 | INFO     | sum of deviations: -11342440192.5
[2025-06-05 16:14:40] 2025-06-05 14:14:22,532 | INFO     | mean x: 1749128640.5
[2025-06-05 16:14:40] 2025-06-05 14:14:22,532 | INFO     | mean y: 2352834.8913043477
[2025-06-05 16:14:40] 2025-06-05 14:14:22,532 | INFO     | -- intersect: 24348787492.21517
[2025-06-05 16:14:40] 2025-06-05 14:14:22,532 | INFO     | intersect: 24348787492.21517
[2025-06-05 16:14:40] 2025-06-05 14:14:22,533 | INFO     | chi2: 0.06376541508309501
[2025-06-05 16:14:40] 2025-06-05 14:14:22,533 | INFO     | current chi2=0.06376541508309501 (change=96.35909129152655 %)
[2025-06-05 16:14:40] 2025-06-05 14:14:22,533 | INFO     | sum of square deviations: 729472282.0
[2025-06-05 16:14:40] 2025-06-05 14:14:22,534 | INFO     | sum of deviations: -9537289366.0
[2025-06-05 16:14:40] 2025-06-05 14:14:22,534 | INFO     | mean x: 1749128793.0
[2025-06-05 16:14:40] 2025-06-05 14:14:22,534 | INFO     | mean y: 2349573.7669172934
[2025-06-05 16:14:40] 2025-06-05 14:14:22,534 | INFO     | -- intersect: 22870864044.949135
[2025-06-05 16:14:40] 2025-06-05 14:14:22,534 | INFO     | intersect: 22870864044.949135
[2025-06-05 16:14:40] 2025-06-05 14:14:22,534 | INFO     | chi2: 0.05995252435775817
[2025-06-05 16:14:40] 2025-06-05 14:14:22,534 | INFO     | current chi2=0.05995252435775817 (change=5.979559170701113 %)
[2025-06-05 16:14:40] 2025-06-05 14:14:22,535 | INFO     | left removable region: 20
[2025-06-05 16:14:40] 2025-06-05 14:14:22,535 | INFO     | sum of square deviations: 496597218.0
[2025-06-05 16:14:40] 2025-06-05 14:14:22,535 | INFO     | sum of deviations: -3446943286.9999995
[2025-06-05 16:14:40] 2025-06-05 14:14:22,535 | INFO     | mean x: 1749128915.0
[2025-06-05 16:14:40] 2025-06-05 14:14:22,536 | INFO     | mean y: 2337944.205128205
[2025-06-05 16:14:40] 2025-06-05 14:14:22,536 | INFO     | -- intersect: 12143260110.339458
[2025-06-05 16:14:40] 2025-06-05 14:14:22,536 | INFO     | intersect: 12143260110.339458
[2025-06-05 16:14:40] 2025-06-05 14:14:22,536 | INFO     | chi2: 0.03706667875585911
[2025-06-05 16:14:40] 2025-06-05 14:14:22,536 | INFO     | -- intersect: 12143260110.339458
[2025-06-05 16:14:40] 2025-06-05 14:14:22,536 | INFO     | current memory leak: -6.94 B/s (using 117 data points, chi2=0.04)
[2025-06-05 16:14:40] 2025-06-05 14:14:22,537 | INFO     | ..............................
[2025-06-05 16:14:40] 2025-06-05 14:14:22,537 | INFO     | . Timing measurements:
[2025-06-05 16:14:40] 2025-06-05 14:14:22,537 | INFO     | . get job = 0 s
[2025-06-05 16:14:40] 2025-06-05 14:14:22,537 | INFO     | . initial setup = 1 s
[2025-06-05 16:14:40] 2025-06-05 14:14:22,537 | INFO     | . payload setup = 9 s
[2025-06-05 16:14:40] 2025-06-05 14:14:22,537 | INFO     | . stage-in = 0 s
[2025-06-05 16:14:40] 2025-06-05 14:14:22,537 | INFO     | . payload execution = 8700 s
[2025-06-05 16:14:40] 2025-06-05 14:14:22,537 | INFO     | . stage-out = 0 s
[2025-06-05 16:14:40] 2025-06-05 14:14:22,538 | INFO     | . log creation = 0 s
[2025-06-05 16:14:40] 2025-06-05 14:14:22,538 | INFO     | ..............................
[2025-06-05 16:14:40] 2025-06-05 14:14:22,638 | INFO     | 
[2025-06-05 16:14:40] 2025-06-05 14:14:22,639 | INFO     | job summary report
[2025-06-05 16:14:40] 2025-06-05 14:14:22,639 | INFO     | --------------------------------------------------
[2025-06-05 16:14:40] 2025-06-05 14:14:22,639 | INFO     | PanDA job id: 6678074375
[2025-06-05 16:14:40] 2025-06-05 14:14:22,639 | INFO     | task id: 45006595
[2025-06-05 16:14:40] 2025-06-05 14:14:22,639 | INFO     | errors: (none)
[2025-06-05 16:14:40] 2025-06-05 14:14:22,639 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 16:14:40] 2025-06-05 14:14:22,639 | INFO     | pilot state: finished 
[2025-06-05 16:14:40] 2025-06-05 14:14:22,639 | INFO     | transexitcode: 0
[2025-06-05 16:14:40] 2025-06-05 14:14:22,639 | INFO     | exeerrorcode: 0
[2025-06-05 16:14:40] 2025-06-05 14:14:22,640 | INFO     | exeerrordiag: 
[2025-06-05 16:14:40] 2025-06-05 14:14:22,640 | INFO     | exitcode: 0
[2025-06-05 16:14:40] 2025-06-05 14:14:22,640 | INFO     | exitmsg: OK
[2025-06-05 16:14:40] 2025-06-05 14:14:22,640 | INFO     | cpuconsumptiontime: 32424 s
[2025-06-05 16:14:40] 2025-06-05 14:14:22,640 | INFO     | nevents: 400
[2025-06-05 16:14:40] 2025-06-05 14:14:22,640 | INFO     | neventsw: 0
[2025-06-05 16:14:40] 2025-06-05 14:14:22,640 | INFO     | pid: 188216
[2025-06-05 16:14:40] 2025-06-05 14:14:22,640 | INFO     | pgrp: 188216
[2025-06-05 16:14:40] 2025-06-05 14:14:22,640 | INFO     | corecount: 4
[2025-06-05 16:14:40] 2025-06-05 14:14:22,640 | INFO     | event service: False
[2025-06-05 16:14:40] 2025-06-05 14:14:22,640 | INFO     | sizes: {0: 2397181, 1: 2397380, 7: 2397586, 12: 2397614, 8713: 2425851, 8715: 2435000, 8722: 2435114}
[2025-06-05 16:14:40] 2025-06-05 14:14:22,641 | INFO     | --------------------------------------------------
[2025-06-05 16:14:40] 2025-06-05 14:14:22,641 | INFO     | 
[2025-06-05 16:14:40] 2025-06-05 14:14:22,641 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2025-06-05 16:14:40] 2025-06-05 14:14:22,669 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 16:14:40] 2025-06-05 14:14:22,669 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 16:14:40] 2025-06-05 14:14:22,669 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 16:14:40] 2025-06-05 14:14:22,669 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 16:14:40] 2025-06-05 14:14:22,670 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 16:14:40] 2025-06-05 14:14:22,670 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 16:14:40] 2025-06-05 14:14:22,670 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 16:14:40] 2025-06-05 14:14:22,670 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 16:14:40] 2025-06-05 14:14:22,670 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 16:14:40] 2025-06-05 14:14:22,670 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 16:14:40] 2025-06-05 14:14:22,670 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 16:14:40] 2025-06-05 14:14:22,670 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 16:14:40] 2025-06-05 14:14:22,670 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 16:14:40] 2025-06-05 14:14:22,670 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 16:14:40] 2025-06-05 14:14:22,670 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 16:14:40] 2025-06-05 14:14:22,670 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 16:14:40] 2025-06-05 14:14:22,671 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 16:14:40] 2025-06-05 14:14:22,671 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 16:14:40] 2025-06-05 14:14:22,671 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 16:14:40] 2025-06-05 14:14:22,671 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 16:14:40] 2025-06-05 14:14:22,671 | INFO     | job 6678074375 has completed (purged errors)
[2025-06-05 16:14:40] 2025-06-05 14:14:22,671 | INFO     | overall cleanup function is called
[2025-06-05 16:14:40] 2025-06-05 14:14:23,302 | INFO     | PID=180832 has CPU usage=21.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 16:14:40] 2025-06-05 14:14:23,302 | INFO     | .. there are 13 such processes running
[2025-06-05 16:14:40] 2025-06-05 14:14:23,681 | INFO     | --- collectZombieJob: --- 10, [188216]
[2025-06-05 16:14:40] 2025-06-05 14:14:23,681 | INFO     | zombie collector waiting for pid 188216
[2025-06-05 16:14:40] 2025-06-05 14:14:23,681 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 16:14:40] 2025-06-05 14:14:23,681 | INFO     | collected zombie processes
[2025-06-05 16:14:40] 2025-06-05 14:14:23,681 | INFO     | will attempt to kill all subprocesses of pid=188216
[2025-06-05 16:14:40] 2025-06-05 14:14:24,385 | INFO     | process IDs to be killed: [188216] (in reverse order)
[2025-06-05 16:14:40] 2025-06-05 14:14:24,622 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 16:14:40] 2025-06-05 14:14:24,623 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 16:14:40] 2025-06-05 14:14:24,650 | INFO     | did not find any defunct processes belonging to 188216
[2025-06-05 16:14:40] 2025-06-05 14:14:24,673 | INFO     | did not find any defunct processes belonging to 188216
[2025-06-05 16:14:40] 2025-06-05 14:14:24,674 | INFO     | ready for new job
[2025-06-05 16:14:40] 2025-06-05 14:14:24,674 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 16:14:40] 2025-06-05 14:14:24,676 | INFO     | **************************************
[2025-06-05 16:14:40] 2025-06-05 14:14:24,676 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 16:14:40] 2025-06-05 14:14:24,676 | INFO     | **************************************
[2025-06-05 16:14:40] 2025-06-05 14:14:24,676 | INFO     | 
[2025-06-05 16:14:40] 2025-06-05 14:14:24,684 | INFO     | architecture information:
[2025-06-05 16:14:40] 2025-06-05 14:14:24,685 | INFO     | executing command: cat /etc/os-release
[2025-06-05 16:14:40] 2025-06-05 14:14:24,710 | INFO     | cat /etc/os-release:
[2025-06-05 16:14:40] NAME="CentOS Linux"
[2025-06-05 16:14:40] VERSION="7 (Core)"
[2025-06-05 16:14:40] ID="centos"
[2025-06-05 16:14:40] ID_LIKE="rhel fedora"
[2025-06-05 16:14:40] VERSION_ID="7"
[2025-06-05 16:14:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 16:14:40] ANSI_COLOR="0;31"
[2025-06-05 16:14:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 16:14:40] HOME_URL="https://www.centos.org/"
[2025-06-05 16:14:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 16:14:40] 
[2025-06-05 16:14:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 16:14:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 16:14:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 16:14:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 16:14:40] 
[2025-06-05 16:14:40] 2025-06-05 14:14:24,711 | INFO     | **************************************
[2025-06-05 16:14:40] 2025-06-05 14:14:25,213 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2025-06-05 16:14:40] 2025-06-05 14:14:25,239 | INFO     | sufficient remaining disk space (3293614964736 B)
[2025-06-05 16:14:40] 2025-06-05 14:14:25,240 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 16:14:40] 2025-06-05 14:14:25,240 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 16:14:40] 2025-06-05 14:14:25,240 | INFO     | update_server=False
[2025-06-05 16:14:40] 2025-06-05 14:14:25,240 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 16:14:40] 2025-06-05 14:14:25,240 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 16:14:40] 2025-06-05 14:14:25,241 | INFO     | aborting loop
[2025-06-05 16:14:40] 2025-06-05 14:14:25,244 | INFO     | all data control threads have been joined
[2025-06-05 16:14:40] 2025-06-05 14:14:25,308 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 16:14:40] 2025-06-05 14:14:25,308 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 16:14:40] 2025-06-05 14:14:25,308 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 16:14:40] 2025-06-05 14:14:25,317 | INFO     | all job control threads have been joined
[2025-06-05 16:14:40] 2025-06-05 14:14:25,897 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 16:14:40] 2025-06-05 14:14:26,143 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 16:14:40] 2025-06-05 14:14:26,242 | INFO     | [job] retrieve thread has finished
[2025-06-05 16:14:40] 2025-06-05 14:14:26,246 | INFO     | [job] job monitor thread has finished
[2025-06-05 16:14:40] 2025-06-05 14:14:26,248 | INFO     | [data] control thread has finished
[2025-06-05 16:14:40] 2025-06-05 14:14:26,323 | INFO     | [job] control thread has finished
[2025-06-05 16:14:40] 2025-06-05 14:14:26,327 | INFO     | [job] validate thread has finished
[2025-06-05 16:14:40] 2025-06-05 14:14:26,381 | INFO     | [payload] validate_post thread has finished
[2025-06-05 16:14:40] 2025-06-05 14:14:26,387 | INFO     | [payload] failed_post thread has finished
[2025-06-05 16:14:40] 2025-06-05 14:14:26,685 | INFO     | all payload control threads have been joined
[2025-06-05 16:14:40] 2025-06-05 14:14:26,749 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 16:14:40] 2025-06-05 14:14:26,915 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 16:14:40] 2025-06-05 14:14:27,022 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 16:14:40] 2025-06-05 14:14:27,276 | INFO     | [data] copytool_in thread has finished
[2025-06-05 16:14:40] 2025-06-05 14:14:27,575 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 16:14:40] 2025-06-05 14:14:27,648 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 16:14:40] 2025-06-05 14:14:27,691 | INFO     | [payload] control thread has finished
[2025-06-05 16:14:40] 2025-06-05 14:14:27,900 | INFO     | [data] copytool_out thread has finished
[2025-06-05 16:14:40] 2025-06-05 14:14:28,653 | INFO     | [job] queue monitor thread has finished
[2025-06-05 16:14:40] 2025-06-05 14:14:30,149 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 16:14:40] 2025-06-05 14:14:30,595 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22539010479936)>', '<ExcThread(monitor, started 22538702792448)>']
[2025-06-05 16:14:40] 2025-06-05 14:14:31,339 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 16:14:40] 2025-06-05 14:14:31,339 | INFO     | [monitor] control thread has ended
[2025-06-05 16:14:40] 2025-06-05 14:14:35,603 | INFO     | all workflow threads have been joined
[2025-06-05 16:14:40] 2025-06-05 14:14:35,604 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 16:14:40] 2025-06-05 14:14:35,604 | INFO     | traces error code: 0
[2025-06-05 16:14:40] 2025-06-05 14:14:35,604 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 16:14:40] 2025-06-05 14:14:35,772 [wrapper] ==== pilot stdout END ====
[2025-06-05 16:14:40] 2025-06-05 14:14:35,777 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 16:14:40] 2025-06-05 14:14:35,781 [wrapper] pilotpid: 180832
[2025-06-05 16:14:40] 2025-06-05 14:14:35,784 [wrapper] Pilot exit status: 0
[2025-06-05 16:14:40] 2025-06-05 14:14:35,800 [wrapper] pandaids: 6678074375
[2025-06-05 16:14:40] 2025-06-05 14:14:35,952 [wrapper] cleanup supervisor_pilot  649381 180833
[2025-06-05 16:14:40] 2025-06-05 14:14:35,956 [wrapper] Test setup, not cleaning
[2025-06-05 16:14:40] 2025-06-05 14:14:35,960 [wrapper] apfmon messages muted
[2025-06-05 16:14:40] 2025-06-05 14:14:35,964 [wrapper] ==== wrapper stdout END ====
[2025-06-05 16:14:40] 2025-06-05 14:14:35,968 [wrapper] ==== wrapper stderr END ====
[2025-06-05 16:14:40]  *** Error codes and diagnostics ***
[2025-06-05 16:14:40]     "exeErrorCode": 0,
[2025-06-05 16:14:40]     "exeErrorDiag": "",
[2025-06-05 16:14:40]     "pilotErrorCode": 0,
[2025-06-05 16:14:40]     "pilotErrorDiag": "",
[2025-06-05 16:14:40]  *** Listing of results directory ***
[2025-06-05 16:14:40] total 393964
[2025-06-05 16:14:40] -rw-r--r-- 1 boinc boinc    495897 Jun  3 23:15 pilot3.tar.gz
[2025-06-05 16:14:40] -rwx------ 1 boinc boinc     37140 Jun  3 23:24 runpilot2-wrapper.sh
[2025-06-05 16:14:40] -rw-r--r-- 1 boinc boinc      5111 Jun  3 23:24 queuedata.json
[2025-06-05 16:14:40] -rw-r--r-- 1 boinc boinc       100 Jun  5 13:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 16:14:40] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 13:48 run_atlas
[2025-06-05 16:14:40] -rw-r--r-- 1 boinc boinc       105 Jun  5 13:48 job.xml
[2025-06-05 16:14:40] -rw-r--r-- 2 boinc boinc 215952227 Jun  5 13:48 EVNT.45006593._001841.pool.root.1
[2025-06-05 16:14:40] -rw-r--r-- 1 boinc boinc      6687 Jun  5 13:48 init_data.xml
[2025-06-05 16:14:40] drwxrwx--x 2 boinc boinc      4096 Jun  5 13:48 shared
[2025-06-05 16:14:40] -rw-r--r-- 2 boinc boinc    508875 Jun  5 13:48 input.tar.gz
[2025-06-05 16:14:40] -rw-r--r-- 2 boinc boinc     15093 Jun  5 13:48 start_atlas.sh
[2025-06-05 16:14:40] -rw-r--r-- 1 boinc boinc         0 Jun  5 13:48 boinc_lockfile
[2025-06-05 16:14:40] -rw-r--r-- 1 boinc boinc      2524 Jun  5 13:48 pandaJob.out
[2025-06-05 16:14:40] -rw------- 1 boinc boinc    982836 Jun  5 13:48 agis_schedconf.cvmfs.json
[2025-06-05 16:14:40] -rw------- 1 boinc boinc   1598969 Jun  5 13:48 agis_ddmendpoints.agis.ALL.json
[2025-06-05 16:14:40] drwx------ 4 boinc boinc      4096 Jun  5 13:48 pilot3
[2025-06-05 16:14:40] -rw------- 1 boinc boinc 181462386 Jun  5 16:13 HITS.45006595._045888.pool.root.1
[2025-06-05 16:14:40] -rw------- 1 boinc boinc        95 Jun  5 16:13 pilot_heartbeat.json
[2025-06-05 16:14:40] -rw-r--r-- 1 boinc boinc       529 Jun  5 16:13 boinc_task_state.xml
[2025-06-05 16:14:40] -rw------- 1 boinc boinc      1028 Jun  5 16:14 memory_monitor_summary.json
[2025-06-05 16:14:40] -rw------- 1 boinc boinc    269301 Jun  5 16:14 log.45006595._045888.job.log.tgz.1
[2025-06-05 16:14:40] -rw-r--r-- 1 boinc boinc        27 Jun  5 16:14 wrapper_checkpoint.txt
[2025-06-05 16:14:40] -rw------- 1 boinc boinc      7696 Jun  5 16:14 heartbeat.json
[2025-06-05 16:14:40] -rw------- 1 boinc boinc      4365 Jun  5 16:14 pilotlog.txt
[2025-06-05 16:14:40] -rw------- 1 boinc boinc    820009 Jun  5 16:14 log.45006595._045888.job.log.1
[2025-06-05 16:14:40] -rw------- 1 boinc boinc       357 Jun  5 16:14 output.list
[2025-06-05 16:14:40] -rw-r--r-- 1 boinc boinc       620 Jun  5 16:14 runtime_log
[2025-06-05 16:14:40] -rw------- 1 boinc boinc   1105920 Jun  5 16:14 result.tar.gz
[2025-06-05 16:14:40] -rw-r--r-- 1 boinc boinc      9040 Jun  5 16:14 runtime_log.err
[2025-06-05 16:14:40] -rw------- 1 boinc boinc       662 Jun  5 16:14 ghKNDmHIog7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjEmKDm6BumNm.diag
[2025-06-05 16:14:40] -rw-r--r-- 1 boinc boinc      8192 Jun  5 16:14 boinc_mmap_file
[2025-06-05 16:14:40] -rw-r--r-- 1 boinc boinc     20998 Jun  5 16:14 stderr.txt
[2025-06-05 16:14:40] HITS file was successfully produced:
[2025-06-05 16:14:40] -rw------- 1 boinc boinc 181462386 Jun  5 16:13 shared/HITS.pool.root.1
[2025-06-05 16:14:40]  *** Contents of shared directory: ***
[2025-06-05 16:14:40] total 389708
[2025-06-05 16:14:40] -rw-r--r-- 2 boinc boinc 215952227 Jun  5 13:48 ATLAS.root_0
[2025-06-05 16:14:40] -rw-r--r-- 2 boinc boinc    508875 Jun  5 13:48 input.tar.gz
[2025-06-05 16:14:40] -rw-r--r-- 2 boinc boinc     15093 Jun  5 13:48 start_atlas.sh
[2025-06-05 16:14:40] -rw------- 1 boinc boinc 181462386 Jun  5 16:13 HITS.pool.root.1
[2025-06-05 16:14:40] -rw------- 1 boinc boinc   1105920 Jun  5 16:14 result.tar.gz
16:14:41 (176904): run_atlas exited; CPU time 32898.164299
16:14:41 (176904): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN