Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:56:42 (13735): wrapper (7.7.26015): starting
12:56:42 (13735): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 12:56:42] Arguments: --nthreads 8
[2025-06-04 12:56:42] Threads: 8
[2025-06-04 12:56:42] Checking for CVMFS
[2025-06-04 12:56:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 12:56:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 12:56:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 12:56:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 12:56:44] 2.11.2.0 30898 33105 89496 146777 3 16 15111461 25165825 3525 130560 0 16753275 99.793 19692803 2340 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 12:56:44] CVMFS is ok
[2025-06-04 12:56:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:56:45] Checking for apptainer binary...
[2025-06-04 12:56:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 12:56:45] Running /usr/bin/apptainer --version
[2025-06-04 12:56:45] apptainer version 1.3.2-1.el7
[2025-06-04 12:56:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:58:58] cg-vwn285.simple-grid.lan
[2025-06-04 12:58:58] apptainer works
[2025-06-04 12:58:58] Set ATHENA_PROC_NUMBER=8
[2025-06-04 12:58:58] Set ATHENA_CORE_NUMBER=8
[2025-06-04 12:58:58] Starting ATLAS job with PandaID=6678074249
[2025-06-04 12:58:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 16:59:32]  *** The last 200 lines of the pilot log: ***
[2025-06-04 16:59:32] 2025-06-04 14:59:11,670 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 16:59:32] 2025-06-04 14:59:11,671 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 16:59:32] 2025-06-04 14:59:11,671 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 16:59:32] 2025-06-04 14:59:11,676 | INFO     | fitting pss+swap vs Time
[2025-06-04 16:59:32] 2025-06-04 14:59:11,677 | INFO     | sum of square deviations: 3531973200.0
[2025-06-04 16:59:32] 2025-06-04 14:59:11,679 | INFO     | sum of deviations: 90447311532.00002
[2025-06-04 16:59:32] 2025-06-04 14:59:11,679 | INFO     | mean x: 1749042242.0
[2025-06-04 16:59:32] 2025-06-04 14:59:11,679 | INFO     | mean y: 2440284.257777778
[2025-06-04 16:59:32] 2025-06-04 14:59:11,679 | INFO     | -- intersect: -44787301762.709564
[2025-06-04 16:59:32] 2025-06-04 14:59:11,679 | INFO     | intersect: -44787301762.709564
[2025-06-04 16:59:32] 2025-06-04 14:59:11,680 | INFO     | chi2: 6.542677467802837
[2025-06-04 16:59:32] 2025-06-04 14:59:11,681 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 16:59:32] 2025-06-04 14:59:11,683 | INFO     | sum of deviations: 88419180268.5
[2025-06-04 16:59:32] 2025-06-04 14:59:11,683 | INFO     | mean x: 1749042089.5
[2025-06-04 16:59:32] 2025-06-04 14:59:11,683 | INFO     | mean y: 2438940.9318181816
[2025-06-04 16:59:32] 2025-06-04 14:59:11,683 | INFO     | -- intersect: -46836737623.07026
[2025-06-04 16:59:32] 2025-06-04 14:59:11,683 | INFO     | intersect: -46836737623.07026
[2025-06-04 16:59:32] 2025-06-04 14:59:11,684 | INFO     | chi2: 6.555979378713016
[2025-06-04 16:59:32] 2025-06-04 14:59:11,684 | INFO     | current chi2=6.555979378713016 (change=-0.2033098983656085 %)
[2025-06-04 16:59:32] 2025-06-04 14:59:11,684 | INFO     | right removable region: 219
[2025-06-04 16:59:32] 2025-06-04 14:59:11,684 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 16:59:32] 2025-06-04 14:59:11,686 | INFO     | sum of deviations: 12178522754.000023
[2025-06-04 16:59:32] 2025-06-04 14:59:11,687 | INFO     | mean x: 1749042394.5
[2025-06-04 16:59:32] 2025-06-04 14:59:11,687 | INFO     | mean y: 2492078.309090909
[2025-06-04 16:59:32] 2025-06-04 14:59:11,687 | INFO     | -- intersect: -6448959691.586343
[2025-06-04 16:59:32] 2025-06-04 14:59:11,687 | INFO     | intersect: -6448959691.586343
[2025-06-04 16:59:32] 2025-06-04 14:59:11,687 | INFO     | chi2: 1.5605922980270028
[2025-06-04 16:59:32] 2025-06-04 14:59:11,687 | INFO     | current chi2=1.5605922980270028 (change=76.14749763064384 %)
[2025-06-04 16:59:32] 2025-06-04 14:59:11,688 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 16:59:32] 2025-06-04 14:59:11,690 | INFO     | sum of deviations: -25430495814.000004
[2025-06-04 16:59:32] 2025-06-04 14:59:11,690 | INFO     | mean x: 1749042547.0
[2025-06-04 16:59:32] 2025-06-04 14:59:11,690 | INFO     | mean y: 2517967.465116279
[2025-06-04 16:59:32] 2025-06-04 14:59:11,691 | INFO     | -- intersect: 14435989282.372576
[2025-06-04 16:59:32] 2025-06-04 14:59:11,691 | INFO     | intersect: 14435989282.372576
[2025-06-04 16:59:32] 2025-06-04 14:59:11,691 | INFO     | chi2: 0.17437690286912313
[2025-06-04 16:59:32] 2025-06-04 14:59:11,691 | INFO     | current chi2=0.17437690286912313 (change=88.82623584073937 %)
[2025-06-04 16:59:32] 2025-06-04 14:59:11,692 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 16:59:32] 2025-06-04 14:59:11,694 | INFO     | sum of deviations: -23530607748.0
[2025-06-04 16:59:32] 2025-06-04 14:59:11,694 | INFO     | mean x: 1749042699.5
[2025-06-04 16:59:32] 2025-06-04 14:59:11,694 | INFO     | mean y: 2516544.123809524
[2025-06-04 16:59:32] 2025-06-04 14:59:11,695 | INFO     | -- intersect: 14334526336.324907
[2025-06-04 16:59:32] 2025-06-04 14:59:11,695 | INFO     | intersect: 14334526336.324907
[2025-06-04 16:59:32] 2025-06-04 14:59:11,695 | INFO     | chi2: 0.15624542563182064
[2025-06-04 16:59:32] 2025-06-04 14:59:11,695 | INFO     | current chi2=0.15624542563182064 (change=10.397866310832974 %)
[2025-06-04 16:59:32] 2025-06-04 14:59:11,695 | INFO     | left removable region: 30
[2025-06-04 16:59:32] 2025-06-04 14:59:11,696 | INFO     | sum of square deviations: 2093397390.0
[2025-06-04 16:59:32] 2025-06-04 14:59:11,697 | INFO     | sum of deviations: -977981280.0000004
[2025-06-04 16:59:32] 2025-06-04 14:59:11,697 | INFO     | mean x: 1749042974.0
[2025-06-04 16:59:32] 2025-06-04 14:59:11,698 | INFO     | mean y: 2498393.978835979
[2025-06-04 16:59:32] 2025-06-04 14:59:11,698 | INFO     | -- intersect: 819606170.3898534
[2025-06-04 16:59:32] 2025-06-04 14:59:11,698 | INFO     | intersect: 819606170.3898534
[2025-06-04 16:59:32] 2025-06-04 14:59:11,698 | INFO     | chi2: 0.05015985004635372
[2025-06-04 16:59:32] 2025-06-04 14:59:11,699 | INFO     | -- intersect: 819606170.3898534
[2025-06-04 16:59:32] 2025-06-04 14:59:11,699 | INFO     | current memory leak: -0.47 B/s (using 189 data points, chi2=0.05)
[2025-06-04 16:59:32] 2025-06-04 14:59:11,700 | INFO     | ..............................
[2025-06-04 16:59:32] 2025-06-04 14:59:11,700 | INFO     | . Timing measurements:
[2025-06-04 16:59:32] 2025-06-04 14:59:11,700 | INFO     | . get job = 0 s
[2025-06-04 16:59:32] 2025-06-04 14:59:11,700 | INFO     | . initial setup = 7 s
[2025-06-04 16:59:32] 2025-06-04 14:59:11,700 | INFO     | . payload setup = 172 s
[2025-06-04 16:59:32] 2025-06-04 14:59:11,700 | INFO     | . stage-in = 0 s
[2025-06-04 16:59:32] 2025-06-04 14:59:11,700 | INFO     | . payload execution = 13867 s
[2025-06-04 16:59:32] 2025-06-04 14:59:11,701 | INFO     | . stage-out = 4 s
[2025-06-04 16:59:32] 2025-06-04 14:59:11,701 | INFO     | . log creation = 1 s
[2025-06-04 16:59:32] 2025-06-04 14:59:11,701 | INFO     | ..............................
[2025-06-04 16:59:32] 2025-06-04 14:59:11,845 | INFO     | 
[2025-06-04 16:59:32] 2025-06-04 14:59:11,845 | INFO     | job summary report
[2025-06-04 16:59:32] 2025-06-04 14:59:11,845 | INFO     | --------------------------------------------------
[2025-06-04 16:59:32] 2025-06-04 14:59:11,845 | INFO     | PanDA job id: 6678074249
[2025-06-04 16:59:32] 2025-06-04 14:59:11,845 | INFO     | task id: 45006595
[2025-06-04 16:59:32] 2025-06-04 14:59:11,846 | INFO     | errors: (none)
[2025-06-04 16:59:32] 2025-06-04 14:59:11,846 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 16:59:32] 2025-06-04 14:59:11,846 | INFO     | pilot state: finished 
[2025-06-04 16:59:32] 2025-06-04 14:59:11,846 | INFO     | transexitcode: 0
[2025-06-04 16:59:32] 2025-06-04 14:59:11,846 | INFO     | exeerrorcode: 0
[2025-06-04 16:59:32] 2025-06-04 14:59:11,846 | INFO     | exeerrordiag: 
[2025-06-04 16:59:32] 2025-06-04 14:59:11,846 | INFO     | exitcode: 0
[2025-06-04 16:59:32] 2025-06-04 14:59:11,846 | INFO     | exitmsg: OK
[2025-06-04 16:59:32] 2025-06-04 14:59:11,846 | INFO     | cpuconsumptiontime: 50555 s
[2025-06-04 16:59:32] 2025-06-04 14:59:11,846 | INFO     | nevents: 400
[2025-06-04 16:59:32] 2025-06-04 14:59:11,846 | INFO     | neventsw: 0
[2025-06-04 16:59:32] 2025-06-04 14:59:11,846 | INFO     | pid: 30077
[2025-06-04 16:59:32] 2025-06-04 14:59:11,847 | INFO     | pgrp: 30077
[2025-06-04 16:59:32] 2025-06-04 14:59:11,847 | INFO     | corecount: 8
[2025-06-04 16:59:32] 2025-06-04 14:59:11,847 | INFO     | event service: False
[2025-06-04 16:59:32] 2025-06-04 14:59:11,847 | INFO     | sizes: {0: 2405012, 1: 2405211, 12: 2405211, 23: 2405239, 34: 2405267, 44: 2405295, 55: 2405451, 66: 2405479, 76: 2405507, 82: 2405769, 87: 2405825, 14044: 2435852
[2025-06-04 16:59:32] 2025-06-04 14:59:11,847 | INFO     | --------------------------------------------------
[2025-06-04 16:59:32] 2025-06-04 14:59:11,847 | INFO     | 
[2025-06-04 16:59:32] 2025-06-04 14:59:11,847 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2025-06-04 16:59:32] 2025-06-04 14:59:11,997 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 16:59:32] 2025-06-04 14:59:11,998 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 16:59:32] 2025-06-04 14:59:11,998 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 16:59:32] 2025-06-04 14:59:11,998 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 16:59:32] 2025-06-04 14:59:11,998 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 16:59:32] 2025-06-04 14:59:11,998 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 16:59:32] 2025-06-04 14:59:11,998 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 16:59:32] 2025-06-04 14:59:11,998 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 16:59:32] 2025-06-04 14:59:11,999 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 16:59:32] 2025-06-04 14:59:11,999 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 16:59:32] 2025-06-04 14:59:11,999 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 16:59:32] 2025-06-04 14:59:11,999 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 16:59:32] 2025-06-04 14:59:11,999 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 16:59:32] 2025-06-04 14:59:11,999 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 16:59:32] 2025-06-04 14:59:11,999 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 16:59:32] 2025-06-04 14:59:11,999 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 16:59:32] 2025-06-04 14:59:11,999 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 16:59:32] 2025-06-04 14:59:12,000 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 16:59:32] 2025-06-04 14:59:12,000 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 16:59:32] 2025-06-04 14:59:12,000 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 16:59:32] 2025-06-04 14:59:12,000 | INFO     | job 6678074249 has completed (purged errors)
[2025-06-04 16:59:32] 2025-06-04 14:59:12,000 | INFO     | overall cleanup function is called
[2025-06-04 16:59:32] 2025-06-04 14:59:13,008 | INFO     | --- collectZombieJob: --- 10, [30077]
[2025-06-04 16:59:32] 2025-06-04 14:59:13,009 | INFO     | zombie collector waiting for pid 30077
[2025-06-04 16:59:32] 2025-06-04 14:59:13,009 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 16:59:32] 2025-06-04 14:59:13,009 | INFO     | collected zombie processes
[2025-06-04 16:59:32] 2025-06-04 14:59:13,009 | INFO     | will attempt to kill all subprocesses of pid=30077
[2025-06-04 16:59:32] 2025-06-04 14:59:13,113 | INFO     | process IDs to be killed: [30077] (in reverse order)
[2025-06-04 16:59:32] 2025-06-04 14:59:13,182 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 16:59:32] 2025-06-04 14:59:13,182 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 16:59:32] 2025-06-04 14:59:13,186 | INFO     | did not find any defunct processes belonging to 30077
[2025-06-04 16:59:32] 2025-06-04 14:59:13,189 | INFO     | did not find any defunct processes belonging to 30077
[2025-06-04 16:59:32] 2025-06-04 14:59:13,189 | INFO     | ready for new job
[2025-06-04 16:59:32] 2025-06-04 14:59:13,190 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 16:59:32] 2025-06-04 14:59:13,192 | INFO     | **************************************
[2025-06-04 16:59:32] 2025-06-04 14:59:13,192 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 16:59:32] 2025-06-04 14:59:13,192 | INFO     | **************************************
[2025-06-04 16:59:32] 2025-06-04 14:59:13,192 | INFO     | 
[2025-06-04 16:59:32] 2025-06-04 14:59:13,193 | INFO     | pilot is running in a VM
[2025-06-04 16:59:32] 2025-06-04 14:59:13,193 | INFO     | architecture information:
[2025-06-04 16:59:32] 2025-06-04 14:59:13,193 | INFO     | executing command: cat /etc/os-release
[2025-06-04 16:59:32] 2025-06-04 14:59:13,222 | INFO     | cat /etc/os-release:
[2025-06-04 16:59:32] NAME="CentOS Linux"
[2025-06-04 16:59:32] VERSION="7 (Core)"
[2025-06-04 16:59:32] ID="centos"
[2025-06-04 16:59:32] ID_LIKE="rhel fedora"
[2025-06-04 16:59:32] VERSION_ID="7"
[2025-06-04 16:59:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 16:59:32] ANSI_COLOR="0;31"
[2025-06-04 16:59:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 16:59:32] HOME_URL="https://www.centos.org/"
[2025-06-04 16:59:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 16:59:32] 
[2025-06-04 16:59:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 16:59:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 16:59:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 16:59:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 16:59:32] 
[2025-06-04 16:59:32] 2025-06-04 14:59:13,222 | INFO     | **************************************
[2025-06-04 16:59:32] 2025-06-04 14:59:13,725 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2025-06-04 16:59:32] 2025-06-04 14:59:13,763 | INFO     | sufficient remaining disk space (496856203264 B)
[2025-06-04 16:59:32] 2025-06-04 14:59:13,764 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 16:59:32] 2025-06-04 14:59:13,764 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 16:59:32] 2025-06-04 14:59:13,764 | INFO     | update_server=False
[2025-06-04 16:59:32] 2025-06-04 14:59:13,764 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 16:59:32] 2025-06-04 14:59:13,765 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 16:59:32] 2025-06-04 14:59:13,765 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:59:32] 2025-06-04 14:59:13,942 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 16:59:32] 2025-06-04 14:59:13,943 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 16:59:32] 2025-06-04 14:59:13,943 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:59:32] 2025-06-04 14:59:13,943 | INFO     | will abort loop
[2025-06-04 16:59:32] 2025-06-04 14:59:14,025 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 16:59:32] 2025-06-04 14:59:14,025 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 16:59:32] 2025-06-04 14:59:14,025 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 16:59:32] 2025-06-04 14:59:14,457 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 16:59:32] 2025-06-04 14:59:14,769 | INFO     | all data control threads have been joined
[2025-06-04 16:59:32] 2025-06-04 14:59:14,770 | INFO     | [job] retrieve thread has finished
[2025-06-04 16:59:32] 2025-06-04 14:59:14,771 | INFO     | [job] queue monitor thread has finished
[2025-06-04 16:59:32] 2025-06-04 14:59:14,926 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 16:59:32] 2025-06-04 14:59:14,939 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 16:59:32] 2025-06-04 14:59:14,948 | INFO     | [job] job monitor thread has finished
[2025-06-04 16:59:32] 2025-06-04 14:59:15,181 | INFO     | all job control threads have been joined
[2025-06-04 16:59:32] 2025-06-04 14:59:15,191 | INFO     | all payload control threads have been joined
[2025-06-04 16:59:32] 2025-06-04 14:59:15,308 | INFO     | [payload] failed_post thread has finished
[2025-06-04 16:59:32] 2025-06-04 14:59:15,432 | INFO     | [payload] validate_post thread has finished
[2025-06-04 16:59:32] 2025-06-04 14:59:15,775 | INFO     | [data] control thread has finished
[2025-06-04 16:59:32] 2025-06-04 14:59:15,788 | INFO     | [data] copytool_in thread has finished
[2025-06-04 16:59:32] 2025-06-04 14:59:15,922 | INFO     | [job] validate thread has finished
[2025-06-04 16:59:32] 2025-06-04 14:59:15,960 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 16:59:32] 2025-06-04 14:59:16,186 | INFO     | [job] control thread has finished
[2025-06-04 16:59:32] 2025-06-04 14:59:16,197 | INFO     | [payload] control thread has finished
[2025-06-04 16:59:32] 2025-06-04 14:59:16,464 | INFO     | [data] copytool_out thread has finished
[2025-06-04 16:59:32] 2025-06-04 14:59:17,776 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 16:59:32] 2025-06-04 14:59:24,799 | INFO     | job.realtimelogging is not enabled
[2025-06-04 16:59:32] 2025-06-04 14:59:25,805 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 16:59:32] 2025-06-04 14:59:26,793 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140353201784640)>', '<ExcThread(monitor, started 140352551909120)>']
[2025-06-04 16:59:32] 2025-06-04 14:59:27,099 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 16:59:32] 2025-06-04 14:59:27,100 | INFO     | [monitor] control thread has ended
[2025-06-04 16:59:32] 2025-06-04 14:59:31,819 | INFO     | all workflow threads have been joined
[2025-06-04 16:59:32] 2025-06-04 14:59:31,819 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 16:59:32] 2025-06-04 14:59:31,820 | INFO     | traces error code: 0
[2025-06-04 16:59:32] 2025-06-04 14:59:31,820 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 16:59:32] 2025-06-04 14:59:32,053 [wrapper] ==== pilot stdout END ====
[2025-06-04 16:59:32] 2025-06-04 14:59:32,062 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 16:59:32] 2025-06-04 14:59:32,070 [wrapper] pilotpid: 21442
[2025-06-04 16:59:32] 2025-06-04 14:59:32,076 [wrapper] Pilot exit status: 0
[2025-06-04 16:59:32] 2025-06-04 14:59:32,097 [wrapper] pandaids: 6678074249
[2025-06-04 16:59:32] 2025-06-04 14:59:32,136 [wrapper] cleanup supervisor_pilot  5232 21443
[2025-06-04 16:59:32] 2025-06-04 14:59:32,154 [wrapper] Test setup, not cleaning
[2025-06-04 16:59:32] 2025-06-04 14:59:32,158 [wrapper] apfmon messages muted
[2025-06-04 16:59:32] 2025-06-04 14:59:32,162 [wrapper] ==== wrapper stdout END ====
[2025-06-04 16:59:32] 2025-06-04 14:59:32,165 [wrapper] ==== wrapper stderr END ====
[2025-06-04 16:59:32]  *** Error codes and diagnostics ***
[2025-06-04 16:59:32]     "exeErrorCode": 0,
[2025-06-04 16:59:32]     "exeErrorDiag": "",
[2025-06-04 16:59:32]     "pilotErrorCode": 0,
[2025-06-04 16:59:32]     "pilotErrorDiag": "",
[2025-06-04 16:59:32]  *** Listing of results directory ***
[2025-06-04 16:59:32] total 393832
[2025-06-04 16:59:32] -rw-r--r--. 1 boinc boinc    495897 Jun  3 22:49 pilot3.tar.gz
[2025-06-04 16:59:32] -rw-r--r--. 1 boinc boinc      5111 Jun  3 23:04 queuedata.json
[2025-06-04 16:59:32] -rwx------. 1 boinc boinc     37140 Jun  3 23:05 runpilot2-wrapper.sh
[2025-06-04 16:59:32] -rw-r--r--. 1 boinc boinc       100 Jun  4 12:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 16:59:32] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 12:56 run_atlas
[2025-06-04 16:59:32] -rw-r--r--. 1 boinc boinc       105 Jun  4 12:56 job.xml
[2025-06-04 16:59:32] -rw-r--r--. 1 boinc boinc      6392 Jun  4 12:56 init_data.xml
[2025-06-04 16:59:32] -rw-r--r--. 2 boinc boinc 215003771 Jun  4 12:56 EVNT.45006593._001836.pool.root.1
[2025-06-04 16:59:32] -rw-r--r--. 2 boinc boinc     15093 Jun  4 12:56 start_atlas.sh
[2025-06-04 16:59:32] drwxrwx--x. 2 boinc boinc        68 Jun  4 12:56 shared
[2025-06-04 16:59:32] -rw-r--r--. 2 boinc boinc    508880 Jun  4 12:56 input.tar.gz
[2025-06-04 16:59:32] -rw-r--r--. 1 boinc boinc         0 Jun  4 12:56 boinc_lockfile
[2025-06-04 16:59:32] -rw-r--r--. 1 boinc boinc      2524 Jun  4 12:58 pandaJob.out
[2025-06-04 16:59:32] -rw-------. 1 boinc boinc    986812 Jun  4 13:01 agis_schedconf.cvmfs.json
[2025-06-04 16:59:32] drwx------. 4 boinc boinc      4096 Jun  4 13:01 pilot3
[2025-06-04 16:59:32] -rw-------. 1 boinc boinc 181301974 Jun  4 16:57 HITS.45006595._045762.pool.root.1
[2025-06-04 16:59:32] -rw-r--r--. 1 boinc boinc       531 Jun  4 16:58 boinc_task_state.xml
[2025-06-04 16:59:32] -rw-------. 1 boinc boinc      1016 Jun  4 16:58 memory_monitor_summary.json
[2025-06-04 16:59:32] -rw-------. 1 boinc boinc   1598969 Jun  4 16:58 agis_ddmendpoints.agis.ALL.json
[2025-06-04 16:59:32] -rw-------. 1 boinc boinc    370792 Jun  4 16:58 log.45006595._045762.job.log.tgz.1
[2025-06-04 16:59:32] -rw-------. 1 boinc boinc      7699 Jun  4 16:59 heartbeat.json
[2025-06-04 16:59:32] -rw-------. 1 boinc boinc        95 Jun  4 16:59 pilot_heartbeat.json
[2025-06-04 16:59:32] -rw-r--r--. 1 boinc boinc        28 Jun  4 16:59 wrapper_checkpoint.txt
[2025-06-04 16:59:32] -rw-r--r--. 1 boinc boinc      8192 Jun  4 16:59 boinc_mmap_file
[2025-06-04 16:59:32] -rw-------. 1 boinc boinc      4675 Jun  4 16:59 pilotlog.txt
[2025-06-04 16:59:32] -rw-------. 1 boinc boinc   1212096 Jun  4 16:59 log.45006595._045762.job.log.1
[2025-06-04 16:59:32] -rw-------. 1 boinc boinc       357 Jun  4 16:59 output.list
[2025-06-04 16:59:32] -rw-r--r--. 1 boinc boinc       620 Jun  4 16:59 runtime_log
[2025-06-04 16:59:32] -rw-------. 1 boinc boinc   1597440 Jun  4 16:59 result.tar.gz
[2025-06-04 16:59:32] -rw-r--r--. 1 boinc boinc      8673 Jun  4 16:59 runtime_log.err
[2025-06-04 16:59:32] -rw-------. 1 boinc boinc       657 Jun  4 16:59 0uHODm0zng7n9Rq4apOajLDm4fhM0noT9bVof3QYDmNxZKDmFcpQ9n.diag
[2025-06-04 16:59:32] -rw-r--r--. 1 boinc boinc     20493 Jun  4 16:59 stderr.txt
[2025-06-04 16:59:32] HITS file was successfully produced:
[2025-06-04 16:59:32] -rw-------. 1 boinc boinc 181301974 Jun  4 16:57 shared/HITS.pool.root.1
[2025-06-04 16:59:32]  *** Contents of shared directory: ***
[2025-06-04 16:59:32] total 389100
[2025-06-04 16:59:32] -rw-r--r--. 2 boinc boinc 215003771 Jun  4 12:56 ATLAS.root_0
[2025-06-04 16:59:32] -rw-r--r--. 2 boinc boinc     15093 Jun  4 12:56 start_atlas.sh
[2025-06-04 16:59:32] -rw-r--r--. 2 boinc boinc    508880 Jun  4 12:56 input.tar.gz
[2025-06-04 16:59:32] -rw-------. 1 boinc boinc 181301974 Jun  4 16:57 HITS.pool.root.1
[2025-06-04 16:59:32] -rw-------. 1 boinc boinc   1597440 Jun  4 16:59 result.tar.gz
16:59:34 (13735): run_atlas exited; CPU time 50749.534057
16:59:34 (13735): called boinc_finish(0)

</stderr_txt>
]]>

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