Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
03:36:46 (1603145): wrapper (7.7.26015): starting
03:36:46 (1603145): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 03:36:46] Arguments: --nthreads 12
[2025-06-06 03:36:46] Threads: 12
[2025-06-06 03:36:46] Checking for CVMFS
[2025-06-06 03:36:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 03:36:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 03:36:48] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 03:36:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 03:36:50] 2.12.7.0 359462 3968 63588 146842 1 55 2756389 4096001 912 130560 0 3346998 99.991 947509 131 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-06 03:36:50] CVMFS is ok
[2025-06-06 03:36:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 03:36:50] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-06 03:36:50] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-06 03:36:50] Further information can be found at the LHC@home message board.
[2025-06-06 03:36:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 03:36:50] Checking for apptainer binary...
[2025-06-06 03:36:50] apptainer is not installed, using version from CVMFS
[2025-06-06 03:36:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 03:36:51] ggg3250
[2025-06-06 03:36:51] apptainer works
[2025-06-06 03:36:52] Set ATHENA_PROC_NUMBER=12
[2025-06-06 03:36:52] Set ATHENA_CORE_NUMBER=12
[2025-06-06 03:36:52] Starting ATLAS job with PandaID=6678074384
[2025-06-06 03:36:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 08:01:55]  *** The last 200 lines of the pilot log: ***
[2025-06-06 08:01:55] 2025-06-06 08:01:36,120 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 08:01:55] 2025-06-06 08:01:36,120 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 08:01:55] 2025-06-06 08:01:36,120 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 08:01:55] 2025-06-06 08:01:36,120 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 08:01:55] 2025-06-06 08:01:36,122 | INFO     | fitting pss+swap vs Time
[2025-06-06 08:01:55] 2025-06-06 08:01:36,122 | INFO     | sum of square deviations: 5263486634.68484
[2025-06-06 08:01:55] 2025-06-06 08:01:36,135 | INFO     | sum of deviations: 2828283068.33852
[2025-06-06 08:01:55] 2025-06-06 08:01:36,135 | INFO     | mean x: 1749189007.0350194
[2025-06-06 08:01:55] 2025-06-06 08:01:36,135 | INFO     | mean y: 2642180.2957198443
[2025-06-06 08:01:55] 2025-06-06 08:01:36,135 | INFO     | -- intersect: -937267426.260588
[2025-06-06 08:01:55] 2025-06-06 08:01:36,136 | INFO     | intersect: -937267426.260588
[2025-06-06 08:01:55] 2025-06-06 08:01:36,136 | INFO     | chi2: 4.578783753384338
[2025-06-06 08:01:55] 2025-06-06 08:01:36,136 | INFO     | sum of square deviations: 4962218614.6785345
[2025-06-06 08:01:55] 2025-06-06 08:01:36,137 | INFO     | sum of deviations: 38152078414.142876
[2025-06-06 08:01:55] 2025-06-06 08:01:36,137 | INFO     | mean x: 1749188854.5357144
[2025-06-06 08:01:55] 2025-06-06 08:01:36,137 | INFO     | mean y: 2659848.4285714286
[2025-06-06 08:01:55] 2025-06-06 08:01:36,137 | INFO     | -- intersect: -13446000019.555622
[2025-06-06 08:01:55] 2025-06-06 08:01:36,137 | INFO     | intersect: -13446000019.555622
[2025-06-06 08:01:55] 2025-06-06 08:01:36,137 | INFO     | chi2: 3.1182030225617505
[2025-06-06 08:01:55] 2025-06-06 08:01:36,137 | INFO     | current chi2=3.1182030225617505 (change=31.89887990982368 %)
[2025-06-06 08:01:55] 2025-06-06 08:01:36,137 | INFO     | sum of square deviations: 4672671744.672042
[2025-06-06 08:01:55] 2025-06-06 08:01:36,138 | INFO     | sum of deviations: 37388509593.032394
[2025-06-06 08:01:55] 2025-06-06 08:01:36,138 | INFO     | mean x: 1749188702.0364373
[2025-06-06 08:01:55] 2025-06-06 08:01:36,142 | INFO     | mean y: 2659446.2186234817
[2025-06-06 08:01:55] 2025-06-06 08:01:36,143 | INFO     | -- intersect: -13993521355.628689
[2025-06-06 08:01:55] 2025-06-06 08:01:36,143 | INFO     | intersect: -13993521355.628689
[2025-06-06 08:01:55] 2025-06-06 08:01:36,143 | INFO     | chi2: 3.120529837731514
[2025-06-06 08:01:55] 2025-06-06 08:01:36,143 | INFO     | current chi2=3.120529837731514 (change=-0.07462038722070471 %)
[2025-06-06 08:01:55] 2025-06-06 08:01:36,143 | INFO     | right removable region: 246
[2025-06-06 08:01:55] 2025-06-06 08:01:36,143 | INFO     | sum of square deviations: 4962213124.6785345
[2025-06-06 08:01:55] 2025-06-06 08:01:36,144 | INFO     | sum of deviations: -65496400112.678535
[2025-06-06 08:01:55] 2025-06-06 08:01:36,144 | INFO     | mean x: 1749189159.5357144
[2025-06-06 08:01:55] 2025-06-06 08:01:36,144 | INFO     | mean y: 2676631.464285714
[2025-06-06 08:01:55] 2025-06-06 08:01:36,144 | INFO     | -- intersect: 23090276899.163975
[2025-06-06 08:01:55] 2025-06-06 08:01:36,144 | INFO     | intersect: 23090276899.163975
[2025-06-06 08:01:55] 2025-06-06 08:01:36,144 | INFO     | chi2: 1.992911747196922
[2025-06-06 08:01:55] 2025-06-06 08:01:36,144 | INFO     | current chi2=1.992911747196922 (change=56.47508477062513 %)
[2025-06-06 08:01:55] 2025-06-06 08:01:36,145 | INFO     | sum of square deviations: 4672660764.672042
[2025-06-06 08:01:55] 2025-06-06 08:01:36,145 | INFO     | sum of deviations: -80730767690.60323
[2025-06-06 08:01:55] 2025-06-06 08:01:36,145 | INFO     | mean x: 1749189312.0364373
[2025-06-06 08:01:55] 2025-06-06 08:01:36,146 | INFO     | mean y: 2684631.1781376516
[2025-06-06 08:01:55] 2025-06-06 08:01:36,146 | INFO     | -- intersect: 30223880457.02384
[2025-06-06 08:01:55] 2025-06-06 08:01:36,146 | INFO     | intersect: 30223880457.02384
[2025-06-06 08:01:55] 2025-06-06 08:01:36,146 | INFO     | chi2: 1.8306766635782823
[2025-06-06 08:01:55] 2025-06-06 08:01:36,146 | INFO     | current chi2=1.8306766635782823 (change=8.140605515865278 %)
[2025-06-06 08:01:55] 2025-06-06 08:01:36,146 | INFO     | left removable region: 20
[2025-06-06 08:01:55] 2025-06-06 08:01:36,146 | INFO     | sum of square deviations: 3579299418.141609
[2025-06-06 08:01:55] 2025-06-06 08:01:36,151 | INFO     | sum of deviations: -27818882422.424774
[2025-06-06 08:01:55] 2025-06-06 08:01:36,151 | INFO     | mean x: 1749189281.539823
[2025-06-06 08:01:55] 2025-06-06 08:01:36,151 | INFO     | mean y: 2694399.8805309734
[2025-06-06 08:01:55] 2025-06-06 08:01:36,151 | INFO     | -- intersect: 13597670755.054188
[2025-06-06 08:01:55] 2025-06-06 08:01:36,151 | INFO     | intersect: 13597670755.054188
[2025-06-06 08:01:55] 2025-06-06 08:01:36,151 | INFO     | chi2: 0.24334658930332742
[2025-06-06 08:01:55] 2025-06-06 08:01:36,151 | INFO     | -- intersect: 13597670755.054188
[2025-06-06 08:01:55] 2025-06-06 08:01:36,151 | INFO     | current memory leak: -7.77 B/s (using 226 data points, chi2=0.24)
[2025-06-06 08:01:55] 2025-06-06 08:01:36,152 | INFO     | ..............................
[2025-06-06 08:01:55] 2025-06-06 08:01:36,152 | INFO     | . Timing measurements:
[2025-06-06 08:01:55] 2025-06-06 08:01:36,152 | INFO     | . get job = 0 s
[2025-06-06 08:01:55] 2025-06-06 08:01:36,152 | INFO     | . initial setup = 7 s
[2025-06-06 08:01:55] 2025-06-06 08:01:36,152 | INFO     | . payload setup = 55 s
[2025-06-06 08:01:55] 2025-06-06 08:01:36,152 | INFO     | . stage-in = 0 s
[2025-06-06 08:01:55] 2025-06-06 08:01:36,152 | INFO     | . payload execution = 15652 s
[2025-06-06 08:01:55] 2025-06-06 08:01:36,152 | INFO     | . stage-out = 3 s
[2025-06-06 08:01:55] 2025-06-06 08:01:36,152 | INFO     | . log creation = 1 s
[2025-06-06 08:01:55] 2025-06-06 08:01:36,152 | INFO     | ..............................
[2025-06-06 08:01:55] 2025-06-06 08:01:36,594 | INFO     | 
[2025-06-06 08:01:55] 2025-06-06 08:01:36,595 | INFO     | job summary report
[2025-06-06 08:01:55] 2025-06-06 08:01:36,595 | INFO     | --------------------------------------------------
[2025-06-06 08:01:55] 2025-06-06 08:01:36,595 | INFO     | PanDA job id: 6678074384
[2025-06-06 08:01:55] 2025-06-06 08:01:36,595 | INFO     | task id: 45006595
[2025-06-06 08:01:55] 2025-06-06 08:01:36,595 | INFO     | errors: (none)
[2025-06-06 08:01:55] 2025-06-06 08:01:36,595 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 08:01:55] 2025-06-06 08:01:36,595 | INFO     | pilot state: finished 
[2025-06-06 08:01:55] 2025-06-06 08:01:36,595 | INFO     | transexitcode: 0
[2025-06-06 08:01:55] 2025-06-06 08:01:36,595 | INFO     | exeerrorcode: 0
[2025-06-06 08:01:55] 2025-06-06 08:01:36,595 | INFO     | exeerrordiag: 
[2025-06-06 08:01:55] 2025-06-06 08:01:36,595 | INFO     | exitcode: 0
[2025-06-06 08:01:55] 2025-06-06 08:01:36,595 | INFO     | exitmsg: OK
[2025-06-06 08:01:55] 2025-06-06 08:01:36,595 | INFO     | cpuconsumptiontime: 21679 s
[2025-06-06 08:01:55] 2025-06-06 08:01:36,595 | INFO     | nevents: 400
[2025-06-06 08:01:55] 2025-06-06 08:01:36,595 | INFO     | neventsw: 0
[2025-06-06 08:01:55] 2025-06-06 08:01:36,595 | INFO     | pid: 1613149
[2025-06-06 08:01:55] 2025-06-06 08:01:36,595 | INFO     | pgrp: 1613149
[2025-06-06 08:01:55] 2025-06-06 08:01:36,595 | INFO     | corecount: 12
[2025-06-06 08:01:55] 2025-06-06 08:01:36,595 | INFO     | event service: False
[2025-06-06 08:01:55] 2025-06-06 08:01:36,595 | INFO     | sizes: {0: 2397194, 1: 2397393, 12: 2397393, 22: 2397421, 26: 2397655, 33: 2397683, 15711: 2428533, 15712: 2428532, 15716: 2437575, 15719: 2437631, 15773: 2437801}
[2025-06-06 08:01:55] 2025-06-06 08:01:36,596 | INFO     | --------------------------------------------------
[2025-06-06 08:01:55] 2025-06-06 08:01:36,596 | INFO     | 
[2025-06-06 08:01:55] 2025-06-06 08:01:36,596 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/0
[2025-06-06 08:01:55] 2025-06-06 08:01:36,699 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 08:01:55] 2025-06-06 08:01:36,699 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 08:01:55] 2025-06-06 08:01:36,699 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 08:01:55] 2025-06-06 08:01:36,699 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 08:01:55] 2025-06-06 08:01:36,699 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 08:01:55] 2025-06-06 08:01:36,699 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 08:01:55] 2025-06-06 08:01:36,699 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 08:01:55] 2025-06-06 08:01:36,699 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 08:01:55] 2025-06-06 08:01:36,699 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 08:01:55] 2025-06-06 08:01:36,699 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 08:01:55] 2025-06-06 08:01:36,699 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 08:01:55] 2025-06-06 08:01:36,699 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 08:01:55] 2025-06-06 08:01:36,699 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 08:01:55] 2025-06-06 08:01:36,699 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 08:01:55] 2025-06-06 08:01:36,699 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 08:01:55] 2025-06-06 08:01:36,700 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 08:01:55] 2025-06-06 08:01:36,700 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 08:01:55] 2025-06-06 08:01:36,700 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 08:01:55] 2025-06-06 08:01:36,700 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 08:01:55] 2025-06-06 08:01:36,700 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 08:01:55] 2025-06-06 08:01:36,700 | INFO     | job 6678074384 has completed (purged errors)
[2025-06-06 08:01:55] 2025-06-06 08:01:36,700 | INFO     | overall cleanup function is called
[2025-06-06 08:01:55] 2025-06-06 08:01:37,706 | INFO     | --- collectZombieJob: --- 10, [1613149]
[2025-06-06 08:01:55] 2025-06-06 08:01:37,707 | INFO     | zombie collector waiting for pid 1613149
[2025-06-06 08:01:55] 2025-06-06 08:01:37,707 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 08:01:55] 2025-06-06 08:01:37,707 | INFO     | collected zombie processes
[2025-06-06 08:01:55] 2025-06-06 08:01:37,707 | INFO     | will attempt to kill all subprocesses of pid=1613149
[2025-06-06 08:01:55] 2025-06-06 08:01:37,877 | INFO     | process IDs to be killed: [1613149] (in reverse order)
[2025-06-06 08:01:55] 2025-06-06 08:01:38,955 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 08:01:55] 2025-06-06 08:01:38,955 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 08:01:55] 2025-06-06 08:01:38,959 | INFO     | did not find any defunct processes belonging to 1613149
[2025-06-06 08:01:55] 2025-06-06 08:01:38,960 | INFO     | did not find any defunct processes belonging to 1613149
[2025-06-06 08:01:55] 2025-06-06 08:01:38,961 | INFO     | ready for new job
[2025-06-06 08:01:55] 2025-06-06 08:01:38,961 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 08:01:55] 2025-06-06 08:01:38,962 | INFO     | **************************************
[2025-06-06 08:01:55] 2025-06-06 08:01:38,962 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 08:01:55] 2025-06-06 08:01:38,962 | INFO     | **************************************
[2025-06-06 08:01:55] 2025-06-06 08:01:38,962 | INFO     | 
[2025-06-06 08:01:55] 2025-06-06 08:01:38,983 | INFO     | architecture information:
[2025-06-06 08:01:55] 2025-06-06 08:01:38,987 | INFO     | executing command: cat /etc/os-release
[2025-06-06 08:01:55] 2025-06-06 08:01:39,207 | INFO     | cat /etc/os-release:
[2025-06-06 08:01:55] NAME="CentOS Linux"
[2025-06-06 08:01:55] VERSION="7 (Core)"
[2025-06-06 08:01:55] ID="centos"
[2025-06-06 08:01:55] ID_LIKE="rhel fedora"
[2025-06-06 08:01:55] VERSION_ID="7"
[2025-06-06 08:01:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 08:01:55] ANSI_COLOR="0;31"
[2025-06-06 08:01:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 08:01:55] HOME_URL="https://www.centos.org/"
[2025-06-06 08:01:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 08:01:55] 
[2025-06-06 08:01:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 08:01:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 08:01:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 08:01:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 08:01:55] 
[2025-06-06 08:01:55] 2025-06-06 08:01:39,207 | INFO     | **************************************
[2025-06-06 08:01:55] 2025-06-06 08:01:39,256 | INFO     | PID=1606729 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 08:01:55] 2025-06-06 08:01:39,256 | INFO     | .. there are 2 such processes running
[2025-06-06 08:01:55] 2025-06-06 08:01:39,711 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/0
[2025-06-06 08:01:55] 2025-06-06 08:01:39,783 | INFO     | sufficient remaining disk space (188533964800 B)
[2025-06-06 08:01:55] 2025-06-06 08:01:39,783 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 08:01:55] 2025-06-06 08:01:39,783 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 08:01:55] 2025-06-06 08:01:39,783 | INFO     | update_server=False
[2025-06-06 08:01:55] 2025-06-06 08:01:39,783 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 08:01:55] 2025-06-06 08:01:39,783 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 08:01:55] 2025-06-06 08:01:39,783 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 08:01:55] 2025-06-06 08:01:39,783 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 08:01:55] 2025-06-06 08:01:39,784 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 08:01:55] 2025-06-06 08:01:40,022 | INFO     | all data control threads have been joined
[2025-06-06 08:01:55] 2025-06-06 08:01:40,155 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 08:01:55] 2025-06-06 08:01:40,558 | INFO     | all job control threads have been joined
[2025-06-06 08:01:55] 2025-06-06 08:01:40,710 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 08:01:55] 2025-06-06 08:01:40,711 | INFO     | aborting loop
[2025-06-06 08:01:55] 2025-06-06 08:01:40,787 | INFO     | [job] retrieve thread has finished
[2025-06-06 08:01:55] 2025-06-06 08:01:40,794 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 08:01:55] 2025-06-06 08:01:40,795 | INFO     | [data] copytool_in thread has finished
[2025-06-06 08:01:55] 2025-06-06 08:01:40,827 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 08:01:55] 2025-06-06 08:01:41,027 | INFO     | [data] control thread has finished
[2025-06-06 08:01:55] 2025-06-06 08:01:41,178 | INFO     | [payload] failed_post thread has finished
[2025-06-06 08:01:55] 2025-06-06 08:01:41,182 | INFO     | [payload] validate_post thread has finished
[2025-06-06 08:01:55] 2025-06-06 08:01:41,302 | INFO     | all payload control threads have been joined
[2025-06-06 08:01:55] 2025-06-06 08:01:41,310 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 08:01:55] 2025-06-06 08:01:41,562 | INFO     | [job] control thread has finished
[2025-06-06 08:01:55] 2025-06-06 08:01:41,714 | INFO     | [job] job monitor thread has finished
[2025-06-06 08:01:55] 2025-06-06 08:01:41,846 | INFO     | [job] validate thread has finished
[2025-06-06 08:01:55] 2025-06-06 08:01:41,922 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 08:01:55] 2025-06-06 08:01:42,102 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 08:01:55] 2025-06-06 08:01:42,162 | INFO     | [data] copytool_out thread has finished
[2025-06-06 08:01:55] 2025-06-06 08:01:42,307 | INFO     | [payload] control thread has finished
[2025-06-06 08:01:55] 2025-06-06 08:01:42,314 | INFO     | [job] queue monitor thread has finished
[2025-06-06 08:01:55] 2025-06-06 08:01:42,766 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 08:01:55] 2025-06-06 08:01:46,786 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 08:01:55] 2025-06-06 08:01:48,114 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139716395784000)>', '<ExcThread(monitor, started 139715814614784)>']
[2025-06-06 08:01:55] 2025-06-06 08:01:48,822 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 08:01:55] 2025-06-06 08:01:48,823 | INFO     | [monitor] control thread has ended
[2025-06-06 08:01:55] 2025-06-06 08:01:53,142 | INFO     | all workflow threads have been joined
[2025-06-06 08:01:55] 2025-06-06 08:01:53,143 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 08:01:55] 2025-06-06 08:01:53,143 | INFO     | traces error code: 0
[2025-06-06 08:01:55] 2025-06-06 08:01:53,143 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 08:01:55] 2025-06-06 08:01:53,786 [wrapper] ==== pilot stdout END ====
[2025-06-06 08:01:55] 2025-06-06 08:01:53,947 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 08:01:55] 2025-06-06 08:01:53,987 [wrapper] pilotpid: 1606729
[2025-06-06 08:01:55] 2025-06-06 08:01:54,139 [wrapper] Pilot exit status: 0
[2025-06-06 08:01:55] 2025-06-06 08:01:54,259 [wrapper] pandaids: 6678074384
[2025-06-06 08:01:55] 2025-06-06 08:01:54,327 [wrapper] cleanup supervisor_pilot 1671943 1606730
[2025-06-06 08:01:55] 2025-06-06 08:01:54,351 [wrapper] Test setup, not cleaning
[2025-06-06 08:01:55] 2025-06-06 08:01:54,387 [wrapper] apfmon messages muted
[2025-06-06 08:01:55] 2025-06-06 08:01:54,415 [wrapper] ==== wrapper stdout END ====
[2025-06-06 08:01:55] 2025-06-06 08:01:54,459 [wrapper] ==== wrapper stderr END ====
[2025-06-06 08:01:55]  *** Error codes and diagnostics ***
[2025-06-06 08:01:55]     "exeErrorCode": 0,
[2025-06-06 08:01:55]     "exeErrorDiag": "",
[2025-06-06 08:01:55]     "pilotErrorCode": 0,
[2025-06-06 08:01:55]     "pilotErrorDiag": "",
[2025-06-06 08:01:55]  *** Listing of results directory ***
[2025-06-06 08:01:55] total 397028
[2025-06-06 08:01:55] -rw-r--r-- 1 boinc boinc    495897 Jun  3 21:15 pilot3.tar.gz
[2025-06-06 08:01:55] -rwx------ 1 boinc boinc     37140 Jun  3 21:22 runpilot2-wrapper.sh
[2025-06-06 08:01:55] -rw-r--r-- 1 boinc boinc      5111 Jun  3 21:22 queuedata.json
[2025-06-06 08:01:55] -rw-rw-r-- 1 boinc boinc       100 Jun  6 03:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 08:01:55] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 03:36 run_atlas
[2025-06-06 08:01:55] -rw-rw-r-- 1 boinc boinc       105 Jun  6 03:36 job.xml
[2025-06-06 08:01:55] -rw-r--r-- 2 boinc boinc     15093 Jun  6 03:36 start_atlas.sh
[2025-06-06 08:01:55] drwxrwx--x 2 boinc boinc      4096 Jun  6 03:36 shared
[2025-06-06 08:01:55] -rw-r--r-- 2 boinc boinc    508876 Jun  6 03:36 input.tar.gz
[2025-06-06 08:01:55] -rw-rw-r-- 1 boinc boinc      9361 Jun  6 03:36 init_data.xml
[2025-06-06 08:01:55] -rw-r--r-- 2 boinc boinc 215952227 Jun  6 03:36 EVNT.45006593._001841.pool.root.1
[2025-06-06 08:01:55] -rw-rw-r-- 1 boinc boinc         0 Jun  6 03:36 boinc_lockfile
[2025-06-06 08:01:55] -rw-rw-r-- 1 boinc boinc      2525 Jun  6 03:36 pandaJob.out
[2025-06-06 08:01:55] -rw------- 1 boinc boinc    987721 Jun  6 03:37 agis_schedconf.cvmfs.json
[2025-06-06 08:01:55] drwx------ 4 boinc boinc      4096 Jun  6 03:37 pilot3
[2025-06-06 08:01:55] -rw------- 1 boinc boinc 182887407 Jun  6 07:58 HITS.45006595._045897.pool.root.1
[2025-06-06 08:01:55] -rw-rw-r-- 1 boinc boinc       530 Jun  6 07:59 boinc_task_state.xml
[2025-06-06 08:01:55] -rw------- 1 boinc boinc      1019 Jun  6 08:00 memory_monitor_summary.json
[2025-06-06 08:01:55] -rw------- 1 boinc boinc   1598969 Jun  6 08:00 agis_ddmendpoints.agis.ALL.json
[2025-06-06 08:01:55] -rw------- 1 boinc boinc    463357 Jun  6 08:00 log.45006595._045897.job.log.tgz.1
[2025-06-06 08:01:55] -rw------- 1 boinc boinc        95 Jun  6 08:01 pilot_heartbeat.json
[2025-06-06 08:01:55] -rw------- 1 boinc boinc      7667 Jun  6 08:01 heartbeat.json
[2025-06-06 08:01:55] -rw-rw-r-- 1 boinc boinc      8192 Jun  6 08:01 boinc_mmap_file
[2025-06-06 08:01:55] -rw-rw-r-- 1 boinc boinc        28 Jun  6 08:01 wrapper_checkpoint.txt
[2025-06-06 08:01:55] -rw------- 1 boinc boinc      4894 Jun  6 08:01 pilotlog.txt
[2025-06-06 08:01:55] -rw------- 1 boinc boinc   1472852 Jun  6 08:01 log.45006595._045897.job.log.1
[2025-06-06 08:01:55] -rw------- 1 boinc boinc       357 Jun  6 08:01 output.list
[2025-06-06 08:01:55] -rw-rw-r-- 1 boinc boinc       620 Jun  6 08:01 runtime_log
[2025-06-06 08:01:55] -rw------- 1 boinc boinc   1955840 Jun  6 08:01 result.tar.gz
[2025-06-06 08:01:55] -rw-rw-r-- 1 boinc boinc      8959 Jun  6 08:01 runtime_log.err
[2025-06-06 08:01:55] -rw------- 1 boinc boinc       653 Jun  6 08:01 9nyNDmJGog7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSEmKDmXl58tn.diag
[2025-06-06 08:01:55] -rw-rw-r-- 1 boinc boinc     21192 Jun  6 08:01 stderr.txt
[2025-06-06 08:01:55] HITS file was successfully produced:
[2025-06-06 08:01:55] -rw------- 1 boinc boinc 182887407 Jun  6 07:58 shared/HITS.pool.root.1
[2025-06-06 08:01:55]  *** Contents of shared directory: ***
[2025-06-06 08:01:55] total 391932
[2025-06-06 08:01:55] -rw-r--r-- 2 boinc boinc     15093 Jun  6 03:36 start_atlas.sh
[2025-06-06 08:01:55] -rw-r--r-- 2 boinc boinc    508876 Jun  6 03:36 input.tar.gz
[2025-06-06 08:01:55] -rw-r--r-- 2 boinc boinc 215952227 Jun  6 03:36 ATLAS.root_0
[2025-06-06 08:01:55] -rw------- 1 boinc boinc 182887407 Jun  6 07:58 HITS.pool.root.1
[2025-06-06 08:01:55] -rw------- 1 boinc boinc   1955840 Jun  6 08:01 result.tar.gz
08:01:57 (1603145): run_atlas exited; CPU time 21744.843513
08:01:57 (1603145): called boinc_finish(0)

</stderr_txt>
]]>

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