Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:47:15 (13941): wrapper (7.7.26015): starting
14:47:15 (13941): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 14:47:15] Arguments: --nthreads 8
[2025-06-04 14:47:15] Threads: 8
[2025-06-04 14:47:15] Checking for CVMFS
[2025-06-04 14:47:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 14:47:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 14:47:16] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 14:47:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 14:47:17] 2.11.2.0 5987 33215 93756 146780 0 59 24602442 25165825 4296 130560 0 17439692 99.793 18931228 2116 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 14:47:17] CVMFS is ok
[2025-06-04 14:47:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 14:47:17] Checking for apptainer binary...
[2025-06-04 14:47:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 14:47:17] Running /usr/bin/apptainer --version
[2025-06-04 14:47:18] apptainer version 1.3.2-1.el7
[2025-06-04 14:47:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 14:47:27] cg-vwn288.simple-grid.lan
[2025-06-04 14:47:27] apptainer works
[2025-06-04 14:47:27] Set ATHENA_PROC_NUMBER=8
[2025-06-04 14:47:27] Set ATHENA_CORE_NUMBER=8
[2025-06-04 14:47:28] Starting ATLAS job with PandaID=6678071257
[2025-06-04 14:47:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 19:14:36]  *** The last 200 lines of the pilot log: ***
[2025-06-04 19:14:36] 2025-06-04 16:43:50,382 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 19:14:36] 2025-06-04 16:43:50,382 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 19:14:36] 2025-06-04 16:43:50,386 | INFO     | fitting pss+swap vs Time
[2025-06-04 19:14:36] 2025-06-04 16:43:50,387 | INFO     | sum of square deviations: 3301699115.0
[2025-06-04 19:14:36] 2025-06-04 16:43:50,389 | INFO     | sum of deviations: 89354189976.5
[2025-06-04 19:14:36] 2025-06-04 16:43:50,389 | INFO     | mean x: 1749048615.5
[2025-06-04 19:14:36] 2025-06-04 16:43:50,389 | INFO     | mean y: 2412142.159090909
[2025-06-04 19:14:36] 2025-06-04 16:43:50,389 | INFO     | -- intersect: -47332253078.39397
[2025-06-04 19:14:36] 2025-06-04 16:43:50,389 | INFO     | intersect: -47332253078.39397
[2025-06-04 19:14:36] 2025-06-04 16:43:50,390 | INFO     | chi2: 7.479311681764425
[2025-06-04 19:14:36] 2025-06-04 16:43:50,390 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 19:14:36] 2025-06-04 16:43:50,392 | INFO     | sum of deviations: 101601848147.99998
[2025-06-04 19:14:36] 2025-06-04 16:43:50,392 | INFO     | mean x: 1749048463.0
[2025-06-04 19:14:36] 2025-06-04 16:43:50,392 | INFO     | mean y: 2420444.9674418606
[2025-06-04 19:14:36] 2025-06-04 16:43:50,392 | INFO     | -- intersect: -57663475325.334076
[2025-06-04 19:14:36] 2025-06-04 16:43:50,392 | INFO     | intersect: -57663475325.334076
[2025-06-04 19:14:36] 2025-06-04 16:43:50,392 | INFO     | chi2: 6.778397693910789
[2025-06-04 19:14:36] 2025-06-04 16:43:50,393 | INFO     | current chi2=6.778397693910789 (change=9.371370223312919 %)
[2025-06-04 19:14:36] 2025-06-04 16:43:50,393 | INFO     | right removable region: 214
[2025-06-04 19:14:36] 2025-06-04 16:43:50,393 | INFO     | sum of square deviations: 3081657780.0
[2025-06-04 19:14:36] 2025-06-04 16:43:50,395 | INFO     | sum of deviations: 13190222393.999996
[2025-06-04 19:14:36] 2025-06-04 16:43:50,395 | INFO     | mean x: 1749048768.0
[2025-06-04 19:14:36] 2025-06-04 16:43:50,395 | INFO     | mean y: 2464893.2976744184
[2025-06-04 19:14:36] 2025-06-04 16:43:50,395 | INFO     | -- intersect: -7483876509.566243
[2025-06-04 19:14:36] 2025-06-04 16:43:50,395 | INFO     | intersect: -7483876509.566243
[2025-06-04 19:14:36] 2025-06-04 16:43:50,395 | INFO     | chi2: 2.4774025277303093
[2025-06-04 19:14:36] 2025-06-04 16:43:50,396 | INFO     | current chi2=2.4774025277303093 (change=66.8765972974418 %)
[2025-06-04 19:14:36] 2025-06-04 16:43:50,396 | INFO     | sum of square deviations: 2871616632.5
[2025-06-04 19:14:36] 2025-06-04 16:43:50,397 | INFO     | sum of deviations: -27378413358.499996
[2025-06-04 19:14:36] 2025-06-04 16:43:50,398 | INFO     | mean x: 1749048920.5
[2025-06-04 19:14:36] 2025-06-04 16:43:50,398 | INFO     | mean y: 2494192.1
[2025-06-04 19:14:36] 2025-06-04 16:43:50,398 | INFO     | -- intersect: 16678182648.465424
[2025-06-04 19:14:36] 2025-06-04 16:43:50,398 | INFO     | intersect: 16678182648.465424
[2025-06-04 19:14:36] 2025-06-04 16:43:50,398 | INFO     | chi2: 0.9351270730467458
[2025-06-04 19:14:36] 2025-06-04 16:43:50,398 | INFO     | current chi2=0.9351270730467458 (change=62.25372895282103 %)
[2025-06-04 19:14:36] 2025-06-04 16:43:50,399 | INFO     | sum of square deviations: 2671343110.0
[2025-06-04 19:14:36] 2025-06-04 16:43:50,404 | INFO     | sum of deviations: -28277704242.0
[2025-06-04 19:14:36] 2025-06-04 16:43:50,404 | INFO     | mean x: 1749049073.0
[2025-06-04 19:14:36] 2025-06-04 16:43:50,404 | INFO     | mean y: 2494824.43902439
[2025-06-04 19:14:36] 2025-06-04 16:43:50,404 | INFO     | -- intersect: 18517185882.24113
[2025-06-04 19:14:36] 2025-06-04 16:43:50,404 | INFO     | intersect: 18517185882.24113
[2025-06-04 19:14:36] 2025-06-04 16:43:50,405 | INFO     | chi2: 0.9103020177808877
[2025-06-04 19:14:36] 2025-06-04 16:43:50,405 | INFO     | current chi2=0.9103020177808877 (change=2.65472532893047 %)
[2025-06-04 19:14:36] 2025-06-04 16:43:50,405 | INFO     | left removable region: 30
[2025-06-04 19:14:36] 2025-06-04 16:43:50,405 | INFO     | sum of square deviations: 1931608310.0
[2025-06-04 19:14:36] 2025-06-04 16:43:50,406 | INFO     | sum of deviations: 5261632409.000002
[2025-06-04 19:14:36] 2025-06-04 16:43:50,407 | INFO     | mean x: 1749049347.5
[2025-06-04 19:14:36] 2025-06-04 16:43:50,407 | INFO     | mean y: 2488476.467391304
[2025-06-04 19:14:36] 2025-06-04 16:43:50,407 | INFO     | -- intersect: -4761859804.756511
[2025-06-04 19:14:36] 2025-06-04 16:43:50,407 | INFO     | intersect: -4761859804.756511
[2025-06-04 19:14:36] 2025-06-04 16:43:50,407 | INFO     | chi2: 0.0012434581437231196
[2025-06-04 19:14:36] 2025-06-04 16:43:50,407 | INFO     | -- intersect: -4761859804.756511
[2025-06-04 19:14:36] 2025-06-04 16:43:50,407 | INFO     | current memory leak: 2.72 B/s (using 184 data points, chi2=0.00)
[2025-06-04 19:14:36] 2025-06-04 16:43:50,408 | INFO     | ..............................
[2025-06-04 19:14:36] 2025-06-04 16:43:50,408 | INFO     | . Timing measurements:
[2025-06-04 19:14:36] 2025-06-04 16:43:50,408 | INFO     | . get job = 0 s
[2025-06-04 19:14:36] 2025-06-04 16:43:50,408 | INFO     | . initial setup = 5 s
[2025-06-04 19:14:36] 2025-06-04 16:43:50,408 | INFO     | . payload setup = 148 s
[2025-06-04 19:14:36] 2025-06-04 16:43:50,409 | INFO     | . stage-in = 0 s
[2025-06-04 19:14:36] 2025-06-04 16:43:50,409 | INFO     | . payload execution = 13546 s
[2025-06-04 19:14:36] 2025-06-04 16:43:50,409 | INFO     | . stage-out = 4 s
[2025-06-04 19:14:36] 2025-06-04 16:43:50,409 | INFO     | . log creation = 1 s
[2025-06-04 19:14:36] 2025-06-04 16:43:50,409 | INFO     | ..............................
[2025-06-04 19:14:36] 2025-06-04 16:43:50,557 | INFO     | 
[2025-06-04 19:14:36] 2025-06-04 16:43:50,558 | INFO     | job summary report
[2025-06-04 19:14:36] 2025-06-04 16:43:50,558 | INFO     | --------------------------------------------------
[2025-06-04 19:14:36] 2025-06-04 16:43:50,558 | INFO     | PanDA job id: 6678071257
[2025-06-04 19:14:36] 2025-06-04 16:43:50,558 | INFO     | task id: 45006595
[2025-06-04 19:14:36] 2025-06-04 16:43:50,558 | INFO     | errors: (none)
[2025-06-04 19:14:36] 2025-06-04 16:43:50,558 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 19:14:36] 2025-06-04 16:43:50,559 | INFO     | pilot state: finished 
[2025-06-04 19:14:36] 2025-06-04 16:43:50,559 | INFO     | transexitcode: 0
[2025-06-04 19:14:36] 2025-06-04 16:43:50,559 | INFO     | exeerrorcode: 0
[2025-06-04 19:14:36] 2025-06-04 16:43:50,559 | INFO     | exeerrordiag: 
[2025-06-04 19:14:36] 2025-06-04 16:43:50,559 | INFO     | exitcode: 0
[2025-06-04 19:14:36] 2025-06-04 16:43:50,559 | INFO     | exitmsg: OK
[2025-06-04 19:14:36] 2025-06-04 16:43:50,559 | INFO     | cpuconsumptiontime: 48967 s
[2025-06-04 19:14:36] 2025-06-04 16:43:50,559 | INFO     | nevents: 400
[2025-06-04 19:14:36] 2025-06-04 16:43:50,559 | INFO     | neventsw: 0
[2025-06-04 19:14:36] 2025-06-04 16:43:50,560 | INFO     | pid: 28118
[2025-06-04 19:14:36] 2025-06-04 16:43:50,560 | INFO     | pgrp: 28118
[2025-06-04 19:14:36] 2025-06-04 16:43:50,560 | INFO     | corecount: 8
[2025-06-04 19:14:36] 2025-06-04 16:43:50,560 | INFO     | event service: False
[2025-06-04 19:14:36] 2025-06-04 16:43:50,560 | INFO     | sizes: {0: 2396514, 1: 2397199, 2: 2397398, 13: 2397398, 23: 2397454, 34: 2397482, 45: 2397638, 56: 2397666, 66: 2397694, 77: 2397722, 88: 2397778, 95: 2398292, 99
[2025-06-04 19:14:36] 2025-06-04 16:43:50,560 | INFO     | --------------------------------------------------
[2025-06-04 19:14:36] 2025-06-04 16:43:50,560 | INFO     | 
[2025-06-04 19:14:36] 2025-06-04 16:43:50,560 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-04 19:14:36] 2025-06-04 16:43:50,810 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 19:14:36] 2025-06-04 16:43:50,810 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 19:14:36] 2025-06-04 16:43:50,811 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 19:14:36] 2025-06-04 16:43:50,811 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 19:14:36] 2025-06-04 16:43:50,811 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 19:14:36] 2025-06-04 16:43:50,811 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 19:14:36] 2025-06-04 16:43:50,811 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 19:14:36] 2025-06-04 16:43:50,811 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 19:14:36] 2025-06-04 16:43:50,811 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 19:14:36] 2025-06-04 16:43:50,811 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 19:14:36] 2025-06-04 16:43:50,812 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 19:14:36] 2025-06-04 16:43:50,812 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 19:14:36] 2025-06-04 16:43:50,812 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 19:14:36] 2025-06-04 16:43:50,812 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 19:14:36] 2025-06-04 16:43:50,812 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 19:14:36] 2025-06-04 16:43:50,812 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 19:14:36] 2025-06-04 16:43:50,812 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 19:14:36] 2025-06-04 16:43:50,813 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 19:14:36] 2025-06-04 16:43:50,813 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 19:14:36] 2025-06-04 16:43:50,813 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 19:14:36] 2025-06-04 16:43:50,813 | INFO     | job 6678071257 has completed (purged errors)
[2025-06-04 19:14:36] 2025-06-04 16:43:50,813 | INFO     | overall cleanup function is called
[2025-06-04 19:14:36] 2025-06-04 16:43:51,830 | INFO     | --- collectZombieJob: --- 10, [28118]
[2025-06-04 19:14:36] 2025-06-04 16:43:51,831 | INFO     | zombie collector waiting for pid 28118
[2025-06-04 19:14:36] 2025-06-04 16:43:51,831 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 19:14:36] 2025-06-04 16:43:51,831 | INFO     | collected zombie processes
[2025-06-04 19:14:36] 2025-06-04 16:43:51,831 | INFO     | will attempt to kill all subprocesses of pid=28118
[2025-06-04 19:14:36] 2025-06-04 16:43:52,000 | INFO     | process IDs to be killed: [28118] (in reverse order)
[2025-06-04 19:14:36] 2025-06-04 16:43:52,773 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 19:14:36] 2025-06-04 16:43:52,773 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 19:14:36] 2025-06-04 16:43:52,777 | INFO     | did not find any defunct processes belonging to 28118
[2025-06-04 19:14:36] 2025-06-04 16:43:52,780 | INFO     | did not find any defunct processes belonging to 28118
[2025-06-04 19:14:36] 2025-06-04 16:43:52,780 | INFO     | ready for new job
[2025-06-04 19:14:36] 2025-06-04 16:43:52,781 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 19:14:36] 2025-06-04 16:43:52,783 | INFO     | **************************************
[2025-06-04 19:14:36] 2025-06-04 16:43:52,783 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 19:14:36] 2025-06-04 16:43:52,783 | INFO     | **************************************
[2025-06-04 19:14:36] 2025-06-04 16:43:52,783 | INFO     | 
[2025-06-04 19:14:36] 2025-06-04 16:43:52,784 | INFO     | pilot is running in a VM
[2025-06-04 19:14:36] 2025-06-04 16:43:52,784 | INFO     | architecture information:
[2025-06-04 19:14:36] 2025-06-04 16:43:52,792 | INFO     | executing command: cat /etc/os-release
[2025-06-04 19:14:36] 2025-06-04 16:43:52,950 | INFO     | cat /etc/os-release:
[2025-06-04 19:14:36] NAME="CentOS Linux"
[2025-06-04 19:14:36] VERSION="7 (Core)"
[2025-06-04 19:14:36] ID="centos"
[2025-06-04 19:14:36] ID_LIKE="rhel fedora"
[2025-06-04 19:14:36] VERSION_ID="7"
[2025-06-04 19:14:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 19:14:36] ANSI_COLOR="0;31"
[2025-06-04 19:14:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 19:14:36] HOME_URL="https://www.centos.org/"
[2025-06-04 19:14:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 19:14:36] 
[2025-06-04 19:14:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 19:14:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 19:14:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 19:14:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 19:14:36] 
[2025-06-04 19:14:36] 2025-06-04 16:43:52,950 | INFO     | **************************************
[2025-06-04 19:14:36] 2025-06-04 16:43:53,457 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-04 19:14:36] 2025-06-04 16:43:53,586 | INFO     | PID=19526 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 19:14:36] 2025-06-04 16:43:53,587 | INFO     | .. there are 9 such processes running
[2025-06-04 19:14:36] 2025-06-04 16:43:53,657 | INFO     | sufficient remaining disk space (496385392640 B)
[2025-06-04 19:14:36] 2025-06-04 16:43:53,657 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 19:14:36] 2025-06-04 16:43:53,658 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 19:14:36] 2025-06-04 16:43:53,658 | INFO     | update_server=False
[2025-06-04 19:14:36] 2025-06-04 16:43:53,658 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 19:14:36] 2025-06-04 16:43:53,658 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 19:14:36] 2025-06-04 16:43:53,660 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 19:14:36] 2025-06-04 16:43:53,661 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 19:14:36] 2025-06-04 16:43:53,661 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 19:14:36] 2025-06-04 16:43:53,661 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 19:14:36] 2025-06-04 16:43:53,663 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:14:36] 2025-06-04 16:43:53,664 | INFO     | aborting loop
[2025-06-04 19:14:36] 2025-06-04 16:43:54,361 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 19:14:36] 2025-06-04 16:43:54,472 | INFO     | all data control threads have been joined
[2025-06-04 19:14:36] 2025-06-04 16:43:54,664 | INFO     | [job] retrieve thread has finished
[2025-06-04 19:14:36] 2025-06-04 16:43:54,670 | INFO     | [job] job monitor thread has finished
[2025-06-04 19:14:36] 2025-06-04 16:43:54,945 | INFO     | all payload control threads have been joined
[2025-06-04 19:14:36] 2025-06-04 16:43:55,132 | INFO     | [payload] validate_post thread has finished
[2025-06-04 19:14:36] 2025-06-04 16:43:55,204 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 19:14:36] 2025-06-04 16:43:55,313 | INFO     | [payload] failed_post thread has finished
[2025-06-04 19:14:36] 2025-06-04 16:43:55,329 | INFO     | all job control threads have been joined
[2025-06-04 19:14:36] 2025-06-04 16:43:55,381 | INFO     | [job] validate thread has finished
[2025-06-04 19:14:36] 2025-06-04 16:43:55,381 | INFO     | [data] copytool_in thread has finished
[2025-06-04 19:14:36] 2025-06-04 16:43:55,479 | INFO     | [data] control thread has finished
[2025-06-04 19:14:36] 2025-06-04 16:43:55,572 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:14:36] 2025-06-04 16:43:55,640 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 19:14:36] 2025-06-04 16:43:55,718 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 19:14:36] 2025-06-04 16:43:55,952 | INFO     | [payload] control thread has finished
[2025-06-04 19:14:36] 2025-06-04 16:43:56,336 | INFO     | [job] control thread has finished
[2025-06-04 19:14:36] 2025-06-04 16:43:56,369 | INFO     | [data] copytool_out thread has finished
[2025-06-04 19:14:36] 2025-06-04 16:43:56,579 | INFO     | [job] queue monitor thread has finished
[2025-06-04 19:14:36] 2025-06-04 16:43:57,668 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 19:14:36] 2025-06-04 16:44:04,055 | INFO     | job.realtimelogging is not enabled
[2025-06-04 19:14:36] 2025-06-04 16:44:05,062 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 19:14:36] 2025-06-04 16:44:06,107 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140039347455808)>', '<ExcThread(monitor, started 140039044441856)>']
[2025-06-04 19:14:36] 2025-06-04 16:44:06,738 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 19:14:36] 2025-06-04 16:44:06,739 | INFO     | [monitor] control thread has ended
[2025-06-04 19:14:36] 2025-06-04 16:44:11,132 | INFO     | all workflow threads have been joined
[2025-06-04 19:14:36] 2025-06-04 16:44:11,133 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 19:14:36] 2025-06-04 16:44:11,133 | INFO     | traces error code: 0
[2025-06-04 19:14:36] 2025-06-04 16:44:11,133 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 19:14:36] 2025-06-04 16:44:11,580 [wrapper] ==== pilot stdout END ====
[2025-06-04 19:14:36] 2025-06-04 16:44:11,684 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 19:14:36] 2025-06-04 16:44:11,784 [wrapper] pilotpid: 19526
[2025-06-04 19:14:36] 2025-06-04 16:44:11,863 [wrapper] Pilot exit status: 0
[2025-06-04 19:14:36] 2025-06-04 16:44:12,205 [wrapper] pandaids: 6678071257
[2025-06-04 19:14:36] 2025-06-04 16:44:13,068 [wrapper] cleanup supervisor_pilot 24263 19527
[2025-06-04 19:14:36] 2025-06-04 16:44:13,098 [wrapper] Test setup, not cleaning
[2025-06-04 19:14:36] 2025-06-04 16:44:13,154 [wrapper] apfmon messages muted
[2025-06-04 19:14:36] 2025-06-04 16:44:13,251 [wrapper] ==== wrapper stdout END ====
[2025-06-04 19:14:36] 2025-06-04 16:44:13,332 [wrapper] ==== wrapper stderr END ====
[2025-06-04 19:14:36]  *** Error codes and diagnostics ***
[2025-06-04 19:14:36]     "exeErrorCode": 0,
[2025-06-04 19:14:36]     "exeErrorDiag": "",
[2025-06-04 19:14:36]     "pilotErrorCode": 0,
[2025-06-04 19:14:36]     "pilotErrorDiag": "",
[2025-06-04 19:14:36]  *** Listing of results directory ***
[2025-06-04 19:14:36] total 386608
[2025-06-04 19:14:36] -rw-r--r--. 1 boinc boinc    495897 Jun  3 22:36 pilot3.tar.gz
[2025-06-04 19:14:36] -rwx------. 1 boinc boinc     37140 Jun  3 22:43 runpilot2-wrapper.sh
[2025-06-04 19:14:36] -rw-r--r--. 1 boinc boinc      5111 Jun  3 22:43 queuedata.json
[2025-06-04 19:14:36] -rw-r--r--. 1 boinc boinc       100 Jun  4 14:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 19:14:36] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 14:47 run_atlas
[2025-06-04 19:14:36] -rw-r--r--. 1 boinc boinc       105 Jun  4 14:47 job.xml
[2025-06-04 19:14:36] -rw-r--r--. 2 boinc boinc 215798872 Jun  4 14:47 EVNT.45006593._001810.pool.root.1
[2025-06-04 19:14:36] -rw-r--r--. 1 boinc boinc      6391 Jun  4 14:47 init_data.xml
[2025-06-04 19:14:36] -rw-r--r--. 2 boinc boinc     15093 Jun  4 14:47 start_atlas.sh
[2025-06-04 19:14:36] drwxrwx--x. 2 boinc boinc        68 Jun  4 14:47 shared
[2025-06-04 19:14:36] -rw-r--r--. 2 boinc boinc    508879 Jun  4 14:47 input.tar.gz
[2025-06-04 19:14:36] -rw-r--r--. 1 boinc boinc         0 Jun  4 14:47 boinc_lockfile
[2025-06-04 19:14:36] -rw-r--r--. 1 boinc boinc      2525 Jun  4 14:47 pandaJob.out
[2025-06-04 19:14:36] -rw-------. 1 boinc boinc    986811 Jun  4 14:50 agis_schedconf.cvmfs.json
[2025-06-04 19:14:36] drwx------. 4 boinc boinc      4096 Jun  4 14:50 pilot3
[2025-06-04 19:14:36] -rw-------. 1 boinc boinc 173129919 Jun  4 18:40 HITS.45006595._045119.pool.root.1
[2025-06-04 19:14:36] -rw-r--r--. 1 boinc boinc       531 Jun  4 18:41 boinc_task_state.xml
[2025-06-04 19:14:36] -rw-------. 1 boinc boinc      1016 Jun  4 18:42 memory_monitor_summary.json
[2025-06-04 19:14:36] -rw-------. 1 boinc boinc   1598969 Jun  4 18:42 agis_ddmendpoints.agis.ALL.json
[2025-06-04 19:14:36] -rw-------. 1 boinc boinc    378639 Jun  4 18:42 log.45006595._045119.job.log.tgz.1
[2025-06-04 19:14:36] -rw-------. 1 boinc boinc        95 Jun  4 18:43 pilot_heartbeat.json
[2025-06-04 19:14:36] -rw-------. 1 boinc boinc      7688 Jun  4 18:43 heartbeat.json
[2025-06-04 19:14:36] -rw-------. 1 boinc boinc      5003 Jun  4 18:44 pilotlog.txt
[2025-06-04 19:14:36] -rw-------. 1 boinc boinc   1191488 Jun  4 18:44 log.45006595._045119.job.log.1
[2025-06-04 19:14:36] -rw-------. 1 boinc boinc       357 Jun  4 18:44 output.list
[2025-06-04 19:14:36] -rw-r--r--. 1 boinc boinc       620 Jun  4 18:44 runtime_log
[2025-06-04 19:14:36] -rw-------. 1 boinc boinc   1587200 Jun  4 18:44 result.tar.gz
[2025-06-04 19:14:36] -rw-r--r--. 1 boinc boinc      8659 Jun  4 18:44 runtime_log.err
[2025-06-04 19:14:36] -rw-------. 1 boinc boinc       656 Jun  4 18:44 kWGLDmzeng7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm45lKDms7hlTo.diag
[2025-06-04 19:14:36] -rw-r--r--. 1 boinc boinc      8192 Jun  4 19:14 boinc_mmap_file
[2025-06-04 19:14:36] -rw-r--r--. 1 boinc boinc        28 Jun  4 19:14 wrapper_checkpoint.txt
[2025-06-04 19:14:36] -rw-r--r--. 1 boinc boinc     20610 Jun  4 19:14 stderr.txt
[2025-06-04 19:14:36] HITS file was successfully produced:
[2025-06-04 19:14:36] -rw-------. 1 boinc boinc 173129919 Jun  4 18:40 shared/HITS.pool.root.1
[2025-06-04 19:14:36]  *** Contents of shared directory: ***
[2025-06-04 19:14:36] total 381888
[2025-06-04 19:14:36] -rw-r--r--. 2 boinc boinc 215798872 Jun  4 14:47 ATLAS.root_0
[2025-06-04 19:14:36] -rw-r--r--. 2 boinc boinc     15093 Jun  4 14:47 start_atlas.sh
[2025-06-04 19:14:36] -rw-r--r--. 2 boinc boinc    508879 Jun  4 14:47 input.tar.gz
[2025-06-04 19:14:36] -rw-------. 1 boinc boinc 173129919 Jun  4 18:40 HITS.pool.root.1
[2025-06-04 19:14:36] -rw-------. 1 boinc boinc   1587200 Jun  4 18:44 result.tar.gz
19:14:38 (13941): run_atlas exited; CPU time 49167.922445
19:14:38 (13941): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN