Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
11:10:04 (1232570): wrapper (7.7.26015): starting
11:10:04 (1232570): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 11:10:04] Arguments: --nthreads 4
[2025-06-04 11:10:04] Threads: 4
[2025-06-04 11:10:04] Checking for CVMFS
[2025-06-04 11:10:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:10:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:10:04] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:10:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:10:05] 2.9.2.0 289090 2440 93756 146773 3 56 23454773 36864000 0 130560 0 2524632 99.993 598576 28521 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 11:10:05] CVMFS is ok
[2025-06-04 11:10:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:10:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:10:05] Further information can be found at the LHC@home message board.
[2025-06-04 11:10:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:10:05] Checking for apptainer binary...
[2025-06-04 11:10:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 11:10:05] Running /usr/bin/apptainer --version
[2025-06-04 11:10:05] apptainer version 1.3.6-6.1
[2025-06-04 11:10:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:10:05] belleA263a
[2025-06-04 11:10:05] apptainer works
[2025-06-04 11:10:05] Set ATHENA_PROC_NUMBER=4
[2025-06-04 11:10:05] Set ATHENA_CORE_NUMBER=4
[2025-06-04 11:10:05] Starting ATLAS job with PandaID=6677976681
[2025-06-04 11:10:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:13:12]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:13:12]  is_tar=False
[2025-06-04 12:13:12]  lfn=log.45006595._043407.job.log.tgz.1
[2025-06-04 12:13:12]  mtime=0
[2025-06-04 12:13:12]  protocol_id=None
[2025-06-04 12:13:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 12:13:12]  replicas=None
[2025-06-04 12:13:12]  scope=mc23_13p6TeV
[2025-06-04 12:13:12]  status=None
[2025-06-04 12:13:12]  status_code=0
[2025-06-04 12:13:12]  storage_token=
[2025-06-04 12:13:12]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6677976681/log.45006595._043407.job.log.tgz.1
[2025-06-04 12:13:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/18/db/log.45006595._043407.job.log.tgz.1
[2025-06-04 12:13:12]  workdir=None
[2025-06-04 12:13:12] ]
[2025-06-04 12:13:12] 2025-06-04 10:12:45,877 | INFO     | transferring file log.45006595._043407.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6677976681/log.45006595._043407.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 12:13:12] 2025-06-04 10:12:45,877 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6677976681/log.45006595._043407.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0434
[2025-06-04 12:13:12] 2025-06-04 10:12:45,896 | INFO     | adding to output.list: log.45006595._043407.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/18/db/log.45006595._043407.job.log.tg
[2025-06-04 12:13:12] 2025-06-04 10:12:45,897 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 12:13:12] 2025-06-04 10:12:45,897 | INFO     | summary of transferred files:
[2025-06-04 12:13:12] 2025-06-04 10:12:45,897 | INFO     |  -- lfn=log.45006595._043407.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 12:13:12] 2025-06-04 10:12:45,897 | INFO     | stage-out finished correctly
[2025-06-04 12:13:12] 2025-06-04 10:12:45,938 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 12:13:12] 2025-06-04 10:12:46,196 | INFO     | monitor loop #290: job 0:6677976681 is in state 'finished'
[2025-06-04 12:13:12] 2025-06-04 10:12:46,197 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:13:12] 2025-06-04 10:12:48,109 | INFO     | job 6677976681 has state=finished
[2025-06-04 12:13:12] 2025-06-04 10:12:48,109 | INFO     | preparing for final server update for job 6677976681 in state='finished'
[2025-06-04 12:13:12] 2025-06-04 10:12:48,110 | INFO     | this job has now completed (state=finished)
[2025-06-04 12:13:12] 2025-06-04 10:12:48,110 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 12:13:12] 2025-06-04 10:12:48,110 | INFO     | log transfer has been attempted: DONE
[2025-06-04 12:13:12] 2025-06-04 10:12:48,110 | INFO     | job 6677976681 has finished - writing final server update
[2025-06-04 12:13:12] 2025-06-04 10:12:48,110 | INFO     | total number of processed events: 400 (read)
[2025-06-04 12:13:12] 2025-06-04 10:12:48,111 | INFO     | executing command: lscpu
[2025-06-04 12:13:12] 2025-06-04 10:12:48,134 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 12:13:12] 2025-06-04 10:12:48,700 | INFO     | monitor loop #291: job 0:6677976681 is in state 'finished'
[2025-06-04 12:13:12] 2025-06-04 10:12:48,701 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:13:12] 2025-06-04 10:12:51,204 | INFO     | monitor loop #292: job 0:6677976681 is in state 'finished'
[2025-06-04 12:13:12] 2025-06-04 10:12:51,204 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:13:12] 2025-06-04 10:12:51,657 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 12:13:12] 2025-06-04 10:12:51,657 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677976681/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:13:12] 2025-06-04 10:12:51,658 | INFO     | extracted standard info from prmon json
[2025-06-04 12:13:12] 2025-06-04 10:12:51,658 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:13:12] 2025-06-04 10:12:51,658 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:13:12] 2025-06-04 10:12:51,658 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:13:12] 2025-06-04 10:12:51,658 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:13:12] 2025-06-04 10:12:51,659 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:13:12] 2025-06-04 10:12:51,659 | INFO     | sum of square deviations: 51573060.0
[2025-06-04 12:13:12] 2025-06-04 10:12:51,659 | INFO     | sum of deviations: -84891687.00000004
[2025-06-04 12:13:12] 2025-06-04 10:12:51,659 | INFO     | mean x: 1749030189.0
[2025-06-04 12:13:12] 2025-06-04 10:12:51,659 | INFO     | mean y: 2407431.290909091
[2025-06-04 12:13:12] 2025-06-04 10:12:51,659 | INFO     | -- intersect: 2881393540.669312
[2025-06-04 12:13:12] 2025-06-04 10:12:51,659 | INFO     | intersect: 2881393540.669312
[2025-06-04 12:13:12] 2025-06-04 10:12:51,659 | INFO     | chi2: 0.022021853473247442
[2025-06-04 12:13:12] 2025-06-04 10:12:51,659 | INFO     | -- intersect: 2881393540.669312
[2025-06-04 12:13:12] 2025-06-04 10:12:51,659 | INFO     | current memory leak: -1.65 B/s (using 55 data points, chi2=0.02)
[2025-06-04 12:13:12] 2025-06-04 10:12:51,660 | INFO     | ..............................
[2025-06-04 12:13:12] 2025-06-04 10:12:51,660 | INFO     | . Timing measurements:
[2025-06-04 12:13:12] 2025-06-04 10:12:51,660 | INFO     | . get job = 0 s
[2025-06-04 12:13:12] 2025-06-04 10:12:51,660 | INFO     | . initial setup = 1 s
[2025-06-04 12:13:12] 2025-06-04 10:12:51,660 | INFO     | . payload setup = 5 s
[2025-06-04 12:13:12] 2025-06-04 10:12:51,660 | INFO     | . stage-in = 0 s
[2025-06-04 12:13:12] 2025-06-04 10:12:51,660 | INFO     | . payload execution = 3729 s
[2025-06-04 12:13:12] 2025-06-04 10:12:51,660 | INFO     | . stage-out = 0 s
[2025-06-04 12:13:12] 2025-06-04 10:12:51,660 | INFO     | . log creation = 0 s
[2025-06-04 12:13:12] 2025-06-04 10:12:51,660 | INFO     | ..............................
[2025-06-04 12:13:12] 2025-06-04 10:12:51,701 | INFO     | 
[2025-06-04 12:13:12] 2025-06-04 10:12:51,701 | INFO     | job summary report
[2025-06-04 12:13:12] 2025-06-04 10:12:51,701 | INFO     | --------------------------------------------------
[2025-06-04 12:13:12] 2025-06-04 10:12:51,701 | INFO     | PanDA job id: 6677976681
[2025-06-04 12:13:12] 2025-06-04 10:12:51,702 | INFO     | task id: 45006595
[2025-06-04 12:13:12] 2025-06-04 10:12:51,702 | INFO     | errors: (none)
[2025-06-04 12:13:12] 2025-06-04 10:12:51,702 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:13:12] 2025-06-04 10:12:51,702 | INFO     | pilot state: finished 
[2025-06-04 12:13:12] 2025-06-04 10:12:51,702 | INFO     | transexitcode: 0
[2025-06-04 12:13:12] 2025-06-04 10:12:51,702 | INFO     | exeerrorcode: 0
[2025-06-04 12:13:12] 2025-06-04 10:12:51,702 | INFO     | exeerrordiag: 
[2025-06-04 12:13:12] 2025-06-04 10:12:51,702 | INFO     | exitcode: 0
[2025-06-04 12:13:12] 2025-06-04 10:12:51,702 | INFO     | exitmsg: OK
[2025-06-04 12:13:12] 2025-06-04 10:12:51,702 | INFO     | cpuconsumptiontime: 13920 s
[2025-06-04 12:13:12] 2025-06-04 10:12:51,702 | INFO     | nevents: 400
[2025-06-04 12:13:12] 2025-06-04 10:12:51,702 | INFO     | neventsw: 0
[2025-06-04 12:13:12] 2025-06-04 10:12:51,702 | INFO     | pid: 1242899
[2025-06-04 12:13:12] 2025-06-04 10:12:51,702 | INFO     | pgrp: 1242899
[2025-06-04 12:13:12] 2025-06-04 10:12:51,702 | INFO     | corecount: 4
[2025-06-04 12:13:12] 2025-06-04 10:12:51,702 | INFO     | event service: False
[2025-06-04 12:13:12] 2025-06-04 10:12:51,702 | INFO     | sizes: {0: 2405187, 3: 2405393, 10: 2405421, 3738: 2431188, 3739: 2440191, 3745: 2440305}
[2025-06-04 12:13:12] 2025-06-04 10:12:51,702 | INFO     | --------------------------------------------------
[2025-06-04 12:13:12] 2025-06-04 10:12:51,702 | INFO     | 
[2025-06-04 12:13:12] 2025-06-04 10:12:51,702 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 12:13:12] 2025-06-04 10:12:51,721 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:13:12] 2025-06-04 10:12:51,721 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:13:12] 2025-06-04 10:12:51,721 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:13:12] 2025-06-04 10:12:51,721 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:13:12] 2025-06-04 10:12:51,721 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:13:12] 2025-06-04 10:12:51,721 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:13:12] 2025-06-04 10:12:51,721 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:13:12] 2025-06-04 10:12:51,721 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:13:12] 2025-06-04 10:12:51,721 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:13:12] 2025-06-04 10:12:51,721 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:13:12] 2025-06-04 10:12:51,721 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:13:12] 2025-06-04 10:12:51,721 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:13:12] 2025-06-04 10:12:51,721 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:13:12] 2025-06-04 10:12:51,721 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:13:12] 2025-06-04 10:12:51,721 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:13:12] 2025-06-04 10:12:51,722 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:13:12] 2025-06-04 10:12:51,722 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:13:12] 2025-06-04 10:12:51,722 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:13:12] 2025-06-04 10:12:51,722 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:13:12] 2025-06-04 10:12:51,722 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:13:12] 2025-06-04 10:12:51,722 | INFO     | job 6677976681 has completed (purged errors)
[2025-06-04 12:13:12] 2025-06-04 10:12:51,722 | INFO     | overall cleanup function is called
[2025-06-04 12:13:12] 2025-06-04 10:12:52,729 | INFO     | --- collectZombieJob: --- 10, [1242899]
[2025-06-04 12:13:12] 2025-06-04 10:12:52,729 | INFO     | zombie collector waiting for pid 1242899
[2025-06-04 12:13:12] 2025-06-04 10:12:52,729 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:13:12] 2025-06-04 10:12:52,729 | INFO     | collected zombie processes
[2025-06-04 12:13:12] 2025-06-04 10:12:52,729 | INFO     | will attempt to kill all subprocesses of pid=1242899
[2025-06-04 12:13:12] 2025-06-04 10:12:52,776 | INFO     | process IDs to be killed: [1242899] (in reverse order)
[2025-06-04 12:13:12] 2025-06-04 10:12:52,811 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:13:12] 2025-06-04 10:12:52,811 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:13:12] 2025-06-04 10:12:52,813 | INFO     | did not find any defunct processes belonging to 1242899
[2025-06-04 12:13:12] 2025-06-04 10:12:52,815 | INFO     | did not find any defunct processes belonging to 1242899
[2025-06-04 12:13:12] 2025-06-04 10:12:52,815 | INFO     | ready for new job
[2025-06-04 12:13:12] 2025-06-04 10:12:52,815 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:13:12] 2025-06-04 10:12:52,816 | INFO     | **************************************
[2025-06-04 12:13:12] 2025-06-04 10:12:52,816 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:13:12] 2025-06-04 10:12:52,816 | INFO     | **************************************
[2025-06-04 12:13:12] 2025-06-04 10:12:52,816 | INFO     | 
[2025-06-04 12:13:12] 2025-06-04 10:12:52,816 | INFO     | architecture information:
[2025-06-04 12:13:12] 2025-06-04 10:12:52,816 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:13:12] 2025-06-04 10:12:52,830 | INFO     | cat /etc/os-release:
[2025-06-04 12:13:12] NAME="CentOS Linux"
[2025-06-04 12:13:12] VERSION="7 (Core)"
[2025-06-04 12:13:12] ID="centos"
[2025-06-04 12:13:12] ID_LIKE="rhel fedora"
[2025-06-04 12:13:12] VERSION_ID="7"
[2025-06-04 12:13:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:13:12] ANSI_COLOR="0;31"
[2025-06-04 12:13:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:13:12] HOME_URL="https://www.centos.org/"
[2025-06-04 12:13:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:13:12] 
[2025-06-04 12:13:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:13:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:13:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:13:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:13:12] 
[2025-06-04 12:13:12] 2025-06-04 10:12:52,831 | INFO     | **************************************
[2025-06-04 12:13:12] 2025-06-04 10:12:53,332 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 12:13:12] 2025-06-04 10:12:53,351 | INFO     | sufficient remaining disk space (332063047680 B)
[2025-06-04 12:13:12] 2025-06-04 10:12:53,351 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:13:12] 2025-06-04 10:12:53,351 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:13:12] 2025-06-04 10:12:53,351 | INFO     | update_server=False
[2025-06-04 12:13:12] 2025-06-04 10:12:53,351 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:13:12] 2025-06-04 10:12:53,352 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:13:12] 2025-06-04 10:12:53,483 | INFO     | PID=1236279 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 12:13:12] 2025-06-04 10:12:53,483 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:13:12] 2025-06-04 10:12:53,483 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:13:12] 2025-06-04 10:12:53,483 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:13:12] 2025-06-04 10:12:53,708 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 12:13:12] 2025-06-04 10:12:53,708 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 12:13:12] 2025-06-04 10:12:53,708 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:13:12] 2025-06-04 10:12:53,709 | INFO     | will abort loop
[2025-06-04 12:13:12] 2025-06-04 10:12:53,840 | INFO     | all job control threads have been joined
[2025-06-04 12:13:12] 2025-06-04 10:12:53,952 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:13:12] 2025-06-04 10:12:53,964 | INFO     | all data control threads have been joined
[2025-06-04 12:13:12] 2025-06-04 10:12:54,357 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:13:12] 2025-06-04 10:12:54,357 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:13:12] 2025-06-04 10:12:54,503 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:13:12] 2025-06-04 10:12:54,536 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:13:12] 2025-06-04 10:12:54,714 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:13:12] 2025-06-04 10:12:54,841 | INFO     | all payload control threads have been joined
[2025-06-04 12:13:12] 2025-06-04 10:12:54,846 | INFO     | [job] control thread has finished
[2025-06-04 12:13:12] 2025-06-04 10:12:54,969 | INFO     | [data] control thread has finished
[2025-06-04 12:13:12] 2025-06-04 10:12:55,120 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:13:12] 2025-06-04 10:12:55,140 | INFO     | [job] validate thread has finished
[2025-06-04 12:13:12] 2025-06-04 10:12:55,296 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:13:12] 2025-06-04 10:12:55,372 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:13:12] 2025-06-04 10:12:55,769 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:13:12] 2025-06-04 10:12:55,847 | INFO     | [payload] control thread has finished
[2025-06-04 12:13:12] 2025-06-04 10:12:55,958 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:13:12] 2025-06-04 10:12:56,491 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:13:12] 2025-06-04 10:13:00,498 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:13:12] 2025-06-04 10:13:04,187 | INFO     | job.realtimelogging is not enabled
[2025-06-04 12:13:12] 2025-06-04 10:13:05,192 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:13:12] 2025-06-04 10:13:07,237 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140431463544640)>', '<ExcThread(monitor, started 140430515623680)>']
[2025-06-04 12:13:12] 2025-06-04 10:13:07,554 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:13:12] 2025-06-04 10:13:07,554 | INFO     | [monitor] control thread has ended
[2025-06-04 12:13:12] 2025-06-04 10:13:12,263 | INFO     | all workflow threads have been joined
[2025-06-04 12:13:12] 2025-06-04 10:13:12,264 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:13:12] 2025-06-04 10:13:12,264 | INFO     | traces error code: 0
[2025-06-04 12:13:12] 2025-06-04 10:13:12,264 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:13:12] 2025-06-04 10:13:12,347 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:13:12] 2025-06-04 10:13:12,352 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:13:12] 2025-06-04 10:13:12,356 [wrapper] pilotpid: 1236279
[2025-06-04 12:13:12] 2025-06-04 10:13:12,360 [wrapper] Pilot exit status: 0
[2025-06-04 12:13:12] 2025-06-04 10:13:12,372 [wrapper] pandaids: 6677976681
[2025-06-04 12:13:12] 2025-06-04 10:13:12,396 [wrapper] cleanup supervisor_pilot 1252929 1236280
[2025-06-04 12:13:12] 2025-06-04 10:13:12,400 [wrapper] Test setup, not cleaning
[2025-06-04 12:13:12] 2025-06-04 10:13:12,404 [wrapper] apfmon messages muted
[2025-06-04 12:13:12] 2025-06-04 10:13:12,408 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:13:12] 2025-06-04 10:13:12,412 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:13:12]  *** Error codes and diagnostics ***
[2025-06-04 12:13:12]     "exeErrorCode": 0,
[2025-06-04 12:13:12]     "exeErrorDiag": "",
[2025-06-04 12:13:12]     "pilotErrorCode": 0,
[2025-06-04 12:13:12]     "pilotErrorDiag": "",
[2025-06-04 12:13:12]  *** Listing of results directory ***
[2025-06-04 12:13:12] total 383672
[2025-06-04 12:13:12] -rw-r--r-- 1 boinc boinc    495897 Jun  3 20:57 pilot3.tar.gz
[2025-06-04 12:13:12] -rwx------ 1 boinc boinc     37140 Jun  3 21:08 runpilot2-wrapper.sh
[2025-06-04 12:13:12] -rw-r--r-- 1 boinc boinc      5111 Jun  3 21:08 queuedata.json
[2025-06-04 12:13:12] -rw-r--r-- 1 boinc boinc       100 Jun  4 11:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:13:12] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 11:10 run_atlas
[2025-06-04 12:13:12] -rw-r--r-- 1 boinc boinc       105 Jun  4 11:10 job.xml
[2025-06-04 12:13:12] -rw-r--r-- 2 boinc boinc 214334940 Jun  4 11:10 EVNT.45006593._001740.pool.root.1
[2025-06-04 12:13:12] -rw-r--r-- 1 boinc boinc      6863 Jun  4 11:10 init_data.xml
[2025-06-04 12:13:12] drwxrwx--x 2 boinc boinc      4096 Jun  4 11:10 shared
[2025-06-04 12:13:12] -rw-r--r-- 2 boinc boinc    508879 Jun  4 11:10 input.tar.gz
[2025-06-04 12:13:12] -rw-r--r-- 2 boinc boinc     15093 Jun  4 11:10 start_atlas.sh
[2025-06-04 12:13:12] -rw-r--r-- 1 boinc boinc         0 Jun  4 11:10 boinc_lockfile
[2025-06-04 12:13:12] -rw-r--r-- 1 boinc boinc      2525 Jun  4 11:10 pandaJob.out
[2025-06-04 12:13:12] -rw------- 1 boinc boinc    986774 Jun  4 11:10 agis_schedconf.cvmfs.json
[2025-06-04 12:13:12] -rw------- 1 boinc boinc   1603667 Jun  4 11:10 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:13:12] drwx------ 4 boinc boinc      4096 Jun  4 11:10 pilot3
[2025-06-04 12:13:12] -rw------- 1 boinc boinc 173496893 Jun  4 12:12 HITS.45006595._043407.pool.root.1
[2025-06-04 12:13:12] -rw------- 1 boinc boinc        95 Jun  4 12:12 pilot_heartbeat.json
[2025-06-04 12:13:12] -rw-r--r-- 1 boinc boinc       529 Jun  4 12:12 boinc_task_state.xml
[2025-06-04 12:13:12] -rw------- 1 boinc boinc      1032 Jun  4 12:12 memory_monitor_summary.json
[2025-06-04 12:13:12] -rw------- 1 boinc boinc    229819 Jun  4 12:12 log.45006595._043407.job.log.tgz.1
[2025-06-04 12:13:12] -rw------- 1 boinc boinc      7663 Jun  4 12:12 heartbeat.json
[2025-06-04 12:13:12] -rw-r--r-- 1 boinc boinc      8192 Jun  4 12:12 boinc_mmap_file
[2025-06-04 12:13:12] -rw-r--r-- 1 boinc boinc        27 Jun  4 12:12 wrapper_checkpoint.txt
[2025-06-04 12:13:12] -rw------- 1 boinc boinc      4934 Jun  4 12:13 pilotlog.txt
[2025-06-04 12:13:12] -rw------- 1 boinc boinc    379048 Jun  4 12:13 log.45006595._043407.job.log.1
[2025-06-04 12:13:12] -rw------- 1 boinc boinc       357 Jun  4 12:13 output.list
[2025-06-04 12:13:12] -rw-r--r-- 1 boinc boinc       620 Jun  4 12:13 runtime_log
[2025-06-04 12:13:12] -rw------- 1 boinc boinc    624640 Jun  4 12:13 result.tar.gz
[2025-06-04 12:13:12] -rw-r--r-- 1 boinc boinc      8753 Jun  4 12:13 runtime_log.err
[2025-06-04 12:13:12] -rw------- 1 boinc boinc       662 Jun  4 12:13 fxgKDmVBmg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmufZKDmIq5FVm.diag
[2025-06-04 12:13:12] -rw-r--r-- 1 boinc boinc     21524 Jun  4 12:13 stderr.txt
[2025-06-04 12:13:12] HITS file was successfully produced:
[2025-06-04 12:13:12] -rw------- 1 boinc boinc 173496893 Jun  4 12:12 shared/HITS.pool.root.1
[2025-06-04 12:13:12]  *** Contents of shared directory: ***
[2025-06-04 12:13:12] total 379876
[2025-06-04 12:13:12] -rw-r--r-- 2 boinc boinc 214334940 Jun  4 11:10 ATLAS.root_0
[2025-06-04 12:13:12] -rw-r--r-- 2 boinc boinc    508879 Jun  4 11:10 input.tar.gz
[2025-06-04 12:13:12] -rw-r--r-- 2 boinc boinc     15093 Jun  4 11:10 start_atlas.sh
[2025-06-04 12:13:12] -rw------- 1 boinc boinc 173496893 Jun  4 12:12 HITS.pool.root.1
[2025-06-04 12:13:12] -rw------- 1 boinc boinc    624640 Jun  4 12:13 result.tar.gz
12:13:13 (1232570): run_atlas exited; CPU time 13930.029549
12:13:13 (1232570): called boinc_finish(0)

</stderr_txt>
]]>

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