Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:47:20 (2800406): wrapper (7.7.26015): starting
21:47:20 (2800406): wrapper: running run_atlas (--nthreads 10)
[2025-06-03 21:47:20] Arguments: --nthreads 10
[2025-06-03 21:47:20] Threads: 10
[2025-06-03 21:47:20] Checking for CVMFS
[2025-06-03 21:47:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 21:47:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 21:47:20] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 21:47:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 21:47:20] 2.12.6.0 9377 696 111876 146763 0 66 22640486 32935936 10645 16776704 0 4912722 99.752 2570436 34380 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 21:47:20] CVMFS is ok
[2025-06-03 21:47:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 21:47:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 21:47:20] Further information can be found at the LHC@home message board.
[2025-06-03 21:47:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 21:47:20] Checking for apptainer binary...
[2025-06-03 21:47:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 21:47:20] Running /usr/bin/apptainer --version
[2025-06-03 21:47:20] apptainer version 1.4.1-1.el9
[2025-06-03 21:47:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 21:47:21] c-8-15.aglt2.org
[2025-06-03 21:47:21] apptainer works
[2025-06-03 21:47:21] Set ATHENA_PROC_NUMBER=10
[2025-06-03 21:47:21] Set ATHENA_CORE_NUMBER=10
[2025-06-03 21:47:21] Starting ATLAS job with PandaID=6677976096
[2025-06-03 21:47:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 23:03:41]  *** The last 200 lines of the pilot log: ***
[2025-06-03 23:03:41]  guid=aef6f875-2819-49e1-8a7e-6765ec78ae65
[2025-06-03 23:03:41]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 23:03:41]  is_altstaged=None
[2025-06-03 23:03:41]  is_tar=False
[2025-06-03 23:03:41]  lfn=log.45006595._043071.job.log.tgz.1
[2025-06-03 23:03:41]  mtime=0
[2025-06-03 23:03:41]  protocol_id=None
[2025-06-03 23:03:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 23:03:41]  replicas=None
[2025-06-03 23:03:41]  scope=mc23_13p6TeV
[2025-06-03 23:03:41]  status=None
[2025-06-03 23:03:41]  status_code=0
[2025-06-03 23:03:41]  storage_token=
[2025-06-03 23:03:41]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6677976096/log.45006595._043071.job.log.tgz.1
[2025-06-03 23:03:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/25/2e/log.45006595._043071.job.log.tgz.1
[2025-06-03 23:03:41]  workdir=None
[2025-06-03 23:03:41] ]
[2025-06-03 23:03:41] 2025-06-04 03:03:14,580 | INFO     | transferring file log.45006595._043071.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6677976096/log.45006595._043071.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 23:03:41] 2025-06-04 03:03:14,581 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6677976096/log.45006595._043071.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._043071.job
[2025-06-03 23:03:41] 2025-06-04 03:03:14,600 | INFO     | adding to output.list: log.45006595._043071.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/25/2e/log.45006595._043071.job.log.tg
[2025-06-03 23:03:41] 2025-06-04 03:03:14,601 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 23:03:41] 2025-06-04 03:03:14,601 | INFO     | summary of transferred files:
[2025-06-03 23:03:41] 2025-06-04 03:03:14,601 | INFO     |  -- lfn=log.45006595._043071.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 23:03:41] 2025-06-04 03:03:14,602 | INFO     | stage-out finished correctly
[2025-06-03 23:03:41] 2025-06-04 03:03:14,709 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 23:03:41] 2025-06-04 03:03:15,839 | INFO     | PID=2804014 has CPU usage=12.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 23:03:41] 2025-06-04 03:03:15,840 | INFO     | .. there are 18 such processes running
[2025-06-03 23:03:41] 2025-06-04 03:03:16,679 | INFO     | monitor loop #337: job 0:6677976096 is in state 'finished'
[2025-06-03 23:03:41] 2025-06-04 03:03:16,679 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 23:03:41] 2025-06-04 03:03:17,586 | INFO     | job 6677976096 has state=finished
[2025-06-03 23:03:41] 2025-06-04 03:03:17,586 | INFO     | preparing for final server update for job 6677976096 in state='finished'
[2025-06-03 23:03:41] 2025-06-04 03:03:17,587 | INFO     | this job has now completed (state=finished)
[2025-06-03 23:03:41] 2025-06-04 03:03:17,587 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 23:03:41] 2025-06-04 03:03:17,587 | INFO     | log transfer has been attempted: DONE
[2025-06-03 23:03:41] 2025-06-04 03:03:17,587 | INFO     | job 6677976096 has finished - writing final server update
[2025-06-03 23:03:41] 2025-06-04 03:03:17,587 | INFO     | total number of processed events: 400 (read)
[2025-06-03 23:03:41] 2025-06-04 03:03:17,602 | INFO     | executing command: lscpu
[2025-06-03 23:03:41] 2025-06-04 03:03:17,667 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 23:03:41] 2025-06-04 03:03:19,182 | INFO     | monitor loop #338: job 0:6677976096 is in state 'finished'
[2025-06-03 23:03:41] 2025-06-04 03:03:19,183 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 23:03:41] 2025-06-04 03:03:21,385 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 23:03:41] 2025-06-04 03:03:21,386 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6677976096/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 23:03:41] 2025-06-04 03:03:21,387 | INFO     | extracted standard info from prmon json
[2025-06-03 23:03:41] 2025-06-04 03:03:21,387 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 23:03:41] 2025-06-04 03:03:21,387 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 23:03:41] 2025-06-04 03:03:21,388 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 23:03:41] 2025-06-04 03:03:21,388 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 23:03:41] 2025-06-04 03:03:21,390 | INFO     | fitting pss+swap vs Time
[2025-06-03 23:03:41] 2025-06-04 03:03:21,390 | INFO     | sum of square deviations: 93240818.0
[2025-06-03 23:03:41] 2025-06-04 03:03:21,390 | INFO     | sum of deviations: 5367055171.0
[2025-06-03 23:03:41] 2025-06-04 03:03:21,391 | INFO     | mean x: 1749003995.0
[2025-06-03 23:03:41] 2025-06-04 03:03:21,391 | INFO     | mean y: 2253006.417910448
[2025-06-03 23:03:41] 2025-06-04 03:03:21,391 | INFO     | -- intersect: -100672549476.16443
[2025-06-03 23:03:41] 2025-06-04 03:03:21,391 | INFO     | intersect: -100672549476.16443
[2025-06-03 23:03:41] 2025-06-04 03:03:21,391 | INFO     | chi2: 0.7602658958772494
[2025-06-03 23:03:41] 2025-06-04 03:03:21,391 | INFO     | -- intersect: -100672549476.16443
[2025-06-03 23:03:41] 2025-06-04 03:03:21,391 | INFO     | current memory leak: 57.56 B/s (using 67 data points, chi2=0.76)
[2025-06-03 23:03:41] 2025-06-04 03:03:21,392 | INFO     | ..............................
[2025-06-03 23:03:41] 2025-06-04 03:03:21,392 | INFO     | . Timing measurements:
[2025-06-03 23:03:41] 2025-06-04 03:03:21,392 | INFO     | . get job = 0 s
[2025-06-03 23:03:41] 2025-06-04 03:03:21,392 | INFO     | . initial setup = 2 s
[2025-06-03 23:03:41] 2025-06-04 03:03:21,392 | INFO     | . payload setup = 6 s
[2025-06-03 23:03:41] 2025-06-04 03:03:21,392 | INFO     | . stage-in = 0 s
[2025-06-03 23:03:41] 2025-06-04 03:03:21,392 | INFO     | . payload execution = 4516 s
[2025-06-03 23:03:41] 2025-06-04 03:03:21,392 | INFO     | . stage-out = 0 s
[2025-06-03 23:03:41] 2025-06-04 03:03:21,393 | INFO     | . log creation = 0 s
[2025-06-03 23:03:41] 2025-06-04 03:03:21,393 | INFO     | ..............................
[2025-06-03 23:03:41] 2025-06-04 03:03:21,501 | INFO     | 
[2025-06-03 23:03:41] 2025-06-04 03:03:21,501 | INFO     | job summary report
[2025-06-03 23:03:41] 2025-06-04 03:03:21,501 | INFO     | --------------------------------------------------
[2025-06-03 23:03:41] 2025-06-04 03:03:21,501 | INFO     | PanDA job id: 6677976096
[2025-06-03 23:03:41] 2025-06-04 03:03:21,501 | INFO     | task id: 45006595
[2025-06-03 23:03:41] 2025-06-04 03:03:21,501 | INFO     | errors: (none)
[2025-06-03 23:03:41] 2025-06-04 03:03:21,502 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 23:03:41] 2025-06-04 03:03:21,502 | INFO     | pilot state: finished 
[2025-06-03 23:03:41] 2025-06-04 03:03:21,502 | INFO     | transexitcode: 0
[2025-06-03 23:03:41] 2025-06-04 03:03:21,502 | INFO     | exeerrorcode: 0
[2025-06-03 23:03:41] 2025-06-04 03:03:21,502 | INFO     | exeerrordiag: 
[2025-06-03 23:03:41] 2025-06-04 03:03:21,502 | INFO     | exitcode: 0
[2025-06-03 23:03:41] 2025-06-04 03:03:21,502 | INFO     | exitmsg: OK
[2025-06-03 23:03:41] 2025-06-04 03:03:21,502 | INFO     | cpuconsumptiontime: 37782 s
[2025-06-03 23:03:41] 2025-06-04 03:03:21,502 | INFO     | nevents: 400
[2025-06-03 23:03:41] 2025-06-04 03:03:21,502 | INFO     | neventsw: 0
[2025-06-03 23:03:41] 2025-06-04 03:03:21,502 | INFO     | pid: 2811445
[2025-06-03 23:03:41] 2025-06-04 03:03:21,503 | INFO     | pgrp: 2811445
[2025-06-03 23:03:41] 2025-06-04 03:03:21,503 | INFO     | corecount: 10
[2025-06-03 23:03:41] 2025-06-04 03:03:21,503 | INFO     | event service: False
[2025-06-03 23:03:41] 2025-06-04 03:03:21,503 | INFO     | sizes: {0: 2405013, 1: 2405212, 4: 2405418, 11: 2405446, 4526: 2431530, 4527: 2431529, 4528: 2440654, 4529: 2440710, 4535: 2440880}
[2025-06-03 23:03:41] 2025-06-04 03:03:21,503 | INFO     | --------------------------------------------------
[2025-06-03 23:03:41] 2025-06-04 03:03:21,503 | INFO     | 
[2025-06-03 23:03:41] 2025-06-04 03:03:21,503 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 23:03:41] 2025-06-04 03:03:21,522 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 23:03:41] 2025-06-04 03:03:21,523 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 23:03:41] 2025-06-04 03:03:21,523 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 23:03:41] 2025-06-04 03:03:21,523 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 23:03:41] 2025-06-04 03:03:21,523 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 23:03:41] 2025-06-04 03:03:21,523 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 23:03:41] 2025-06-04 03:03:21,523 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 23:03:41] 2025-06-04 03:03:21,523 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 23:03:41] 2025-06-04 03:03:21,523 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 23:03:41] 2025-06-04 03:03:21,523 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 23:03:41] 2025-06-04 03:03:21,524 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 23:03:41] 2025-06-04 03:03:21,524 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 23:03:41] 2025-06-04 03:03:21,524 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 23:03:41] 2025-06-04 03:03:21,524 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 23:03:41] 2025-06-04 03:03:21,524 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 23:03:41] 2025-06-04 03:03:21,524 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 23:03:41] 2025-06-04 03:03:21,524 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 23:03:41] 2025-06-04 03:03:21,524 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 23:03:41] 2025-06-04 03:03:21,524 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 23:03:41] 2025-06-04 03:03:21,524 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 23:03:41] 2025-06-04 03:03:21,525 | INFO     | job 6677976096 has completed (purged errors)
[2025-06-03 23:03:41] 2025-06-04 03:03:21,525 | INFO     | overall cleanup function is called
[2025-06-03 23:03:41] 2025-06-04 03:03:22,533 | INFO     | --- collectZombieJob: --- 10, [2811445]
[2025-06-03 23:03:41] 2025-06-04 03:03:22,534 | INFO     | zombie collector waiting for pid 2811445
[2025-06-03 23:03:41] 2025-06-04 03:03:22,534 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 23:03:41] 2025-06-04 03:03:22,534 | INFO     | collected zombie processes
[2025-06-03 23:03:41] 2025-06-04 03:03:22,534 | INFO     | will attempt to kill all subprocesses of pid=2811445
[2025-06-03 23:03:41] 2025-06-04 03:03:22,866 | INFO     | process IDs to be killed: [2811445] (in reverse order)
[2025-06-03 23:03:41] 2025-06-04 03:03:22,960 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 23:03:41] 2025-06-04 03:03:22,960 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 23:03:41] 2025-06-04 03:03:22,971 | INFO     | did not find any defunct processes belonging to 2811445
[2025-06-03 23:03:41] 2025-06-04 03:03:22,982 | INFO     | did not find any defunct processes belonging to 2811445
[2025-06-03 23:03:41] 2025-06-04 03:03:22,983 | INFO     | ready for new job
[2025-06-03 23:03:41] 2025-06-04 03:03:22,983 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 23:03:41] 2025-06-04 03:03:22,985 | INFO     | **************************************
[2025-06-03 23:03:41] 2025-06-04 03:03:22,985 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 23:03:41] 2025-06-04 03:03:22,985 | INFO     | **************************************
[2025-06-03 23:03:41] 2025-06-04 03:03:22,985 | INFO     | 
[2025-06-03 23:03:41] 2025-06-04 03:03:22,999 | INFO     | architecture information:
[2025-06-03 23:03:41] 2025-06-04 03:03:23,000 | INFO     | executing command: cat /etc/os-release
[2025-06-03 23:03:41] 2025-06-04 03:03:23,014 | INFO     | cat /etc/os-release:
[2025-06-03 23:03:41] NAME="CentOS Linux"
[2025-06-03 23:03:41] VERSION="7 (Core)"
[2025-06-03 23:03:41] ID="centos"
[2025-06-03 23:03:41] ID_LIKE="rhel fedora"
[2025-06-03 23:03:41] VERSION_ID="7"
[2025-06-03 23:03:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 23:03:41] ANSI_COLOR="0;31"
[2025-06-03 23:03:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 23:03:41] HOME_URL="https://www.centos.org/"
[2025-06-03 23:03:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 23:03:41] 
[2025-06-03 23:03:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 23:03:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 23:03:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 23:03:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 23:03:41] 
[2025-06-03 23:03:41] 2025-06-04 03:03:23,015 | INFO     | **************************************
[2025-06-03 23:03:41] 2025-06-04 03:03:23,518 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 23:03:41] 2025-06-04 03:03:23,535 | INFO     | sufficient remaining disk space (76602671104 B)
[2025-06-03 23:03:41] 2025-06-04 03:03:23,536 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 23:03:41] 2025-06-04 03:03:23,536 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 23:03:41] 2025-06-04 03:03:23,536 | INFO     | update_server=False
[2025-06-03 23:03:41] 2025-06-04 03:03:23,536 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 23:03:41] 2025-06-04 03:03:23,536 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:03:41] 2025-06-04 03:03:23,537 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 23:03:41] 2025-06-04 03:03:23,537 | INFO     | aborting loop
[2025-06-03 23:03:41] 2025-06-04 03:03:23,555 | INFO     | all data control threads have been joined
[2025-06-03 23:03:41] 2025-06-04 03:03:23,691 | INFO     | all job control threads have been joined
[2025-06-03 23:03:41] 2025-06-04 03:03:23,858 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 23:03:41] 2025-06-04 03:03:23,859 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 23:03:41] 2025-06-04 03:03:23,859 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 23:03:41] 2025-06-04 03:03:24,542 | INFO     | [job] retrieve thread has finished
[2025-06-03 23:03:41] 2025-06-04 03:03:24,542 | INFO     | [job] job monitor thread has finished
[2025-06-03 23:03:41] 2025-06-04 03:03:24,563 | INFO     | [data] control thread has finished
[2025-06-03 23:03:41] 2025-06-04 03:03:24,696 | INFO     | [job] control thread has finished
[2025-06-03 23:03:41] 2025-06-04 03:03:24,995 | INFO     | all payload control threads have been joined
[2025-06-03 23:03:41] 2025-06-04 03:03:25,036 | INFO     | [payload] validate_post thread has finished
[2025-06-03 23:03:41] 2025-06-04 03:03:25,325 | INFO     | [data] copytool_in thread has finished
[2025-06-03 23:03:41] 2025-06-04 03:03:25,325 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 23:03:41] 2025-06-04 03:03:25,466 | INFO     | [payload] failed_post thread has finished
[2025-06-03 23:03:41] 2025-06-04 03:03:25,541 | INFO     | [data] copytool_out thread has finished
[2025-06-03 23:03:41] 2025-06-04 03:03:25,557 | INFO     | [job] validate thread has finished
[2025-06-03 23:03:41] 2025-06-04 03:03:25,650 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 23:03:41] 2025-06-04 03:03:25,719 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 23:03:41] 2025-06-04 03:03:25,866 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 23:03:41] 2025-06-04 03:03:25,999 | INFO     | [payload] control thread has finished
[2025-06-03 23:03:41] 2025-06-04 03:03:26,509 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:03:41] 2025-06-04 03:03:27,514 | INFO     | [job] queue monitor thread has finished
[2025-06-03 23:03:41] 2025-06-04 03:03:29,330 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 23:03:41] 2025-06-04 03:03:34,548 | INFO     | job.realtimelogging is not enabled
[2025-06-03 23:03:41] 2025-06-04 03:03:35,554 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 23:03:41] 2025-06-04 03:03:36,457 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139732934240064)>', '<ExcThread(monitor, started 139732298217216)>']
[2025-06-03 23:03:41] 2025-06-04 03:03:36,919 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 23:03:41] 2025-06-04 03:03:36,919 | INFO     | [monitor] control thread has ended
[2025-06-03 23:03:41] 2025-06-04 03:03:41,481 | INFO     | all workflow threads have been joined
[2025-06-03 23:03:41] 2025-06-04 03:03:41,482 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 23:03:41] 2025-06-04 03:03:41,482 | INFO     | traces error code: 0
[2025-06-03 23:03:41] 2025-06-04 03:03:41,482 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 23:03:41] 2025-06-04 03:03:41,648 [wrapper] ==== pilot stdout END ====
[2025-06-03 23:03:41] 2025-06-04 03:03:41,650 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 23:03:41] 2025-06-04 03:03:41,652 [wrapper] pilotpid: 2804014
[2025-06-03 23:03:41] 2025-06-04 03:03:41,655 [wrapper] Pilot exit status: 0
[2025-06-03 23:03:41] 2025-06-04 03:03:41,665 [wrapper] pandaids: 6677976096
[2025-06-03 23:03:41] 2025-06-04 03:03:41,726 [wrapper] cleanup supervisor_pilot 3069344 2804015
[2025-06-03 23:03:41] 2025-06-04 03:03:41,729 [wrapper] Test setup, not cleaning
[2025-06-03 23:03:41] 2025-06-04 03:03:41,732 [wrapper] apfmon messages muted
[2025-06-03 23:03:41] 2025-06-04 03:03:41,735 [wrapper] ==== wrapper stdout END ====
[2025-06-03 23:03:41] 2025-06-04 03:03:41,738 [wrapper] ==== wrapper stderr END ====
[2025-06-03 23:03:41]  *** Error codes and diagnostics ***
[2025-06-03 23:03:41]     "exeErrorCode": 0,
[2025-06-03 23:03:41]     "exeErrorDiag": "",
[2025-06-03 23:03:41]     "pilotErrorCode": 0,
[2025-06-03 23:03:41]     "pilotErrorDiag": "",
[2025-06-03 23:03:41]  *** Listing of results directory ***
[2025-06-03 23:03:41] total 386408
[2025-06-03 23:03:41] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 14:57 pilot3.tar.gz
[2025-06-03 23:03:41] -rwx------. 1 boincer umatlas     37140 Jun  3 15:04 runpilot2-wrapper.sh
[2025-06-03 23:03:41] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 15:04 queuedata.json
[2025-06-03 23:03:41] -rw-r--r--. 1 boincer umatlas       100 Jun  3 21:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 23:03:41] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 21:47 run_atlas
[2025-06-03 23:03:41] -rw-r--r--. 1 boincer umatlas       105 Jun  3 21:47 job.xml
[2025-06-03 23:03:41] -rw-r--r--. 2 boincer umatlas 212691221 Jun  3 21:47 EVNT.45006593._001726.pool.root.1
[2025-06-03 23:03:41] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 21:47 start_atlas.sh
[2025-06-03 23:03:41] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 21:47 shared
[2025-06-03 23:03:41] -rw-r--r--. 2 boincer umatlas    508883 Jun  3 21:47 input.tar.gz
[2025-06-03 23:03:41] -rw-r--r--. 1 boincer umatlas         0 Jun  3 21:47 boinc_lockfile
[2025-06-03 23:03:41] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 21:47 pandaJob.out
[2025-06-03 23:03:41] -rw-------. 1 boincer umatlas    986077 Jun  3 21:47 agis_schedconf.cvmfs.json
[2025-06-03 23:03:41] -rw-------. 1 boincer umatlas   1603667 Jun  3 21:47 agis_ddmendpoints.agis.ALL.json
[2025-06-03 23:03:41] drwx------. 4 boincer umatlas      4096 Jun  3 21:47 pilot3
[2025-06-03 23:03:41] -rw-r--r--. 1 boincer umatlas      6658 Jun  3 22:54 init_data.xml
[2025-06-03 23:03:41] -rw-------. 1 boincer umatlas 177557908 Jun  3 23:02 HITS.45006595._043071.pool.root.1
[2025-06-03 23:03:41] -rw-r--r--. 1 boincer umatlas       529 Jun  3 23:02 boinc_task_state.xml
[2025-06-03 23:03:41] -rw-------. 1 boincer umatlas        95 Jun  3 23:03 pilot_heartbeat.json
[2025-06-03 23:03:41] -rw-------. 1 boincer umatlas      1036 Jun  3 23:03 memory_monitor_summary.json
[2025-06-03 23:03:41] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 23:03 boinc_mmap_file
[2025-06-03 23:03:41] -rw-r--r--. 1 boincer umatlas        27 Jun  3 23:03 wrapper_checkpoint.txt
[2025-06-03 23:03:41] -rw-------. 1 boincer umatlas    349687 Jun  3 23:03 log.45006595._043071.job.log.tgz.1
[2025-06-03 23:03:41] -rw-------. 1 boincer umatlas      7715 Jun  3 23:03 heartbeat.json
[2025-06-03 23:03:41] -rw-------. 1 boincer umatlas      4425 Jun  3 23:03 pilotlog.txt
[2025-06-03 23:03:41] -rw-------. 1 boincer umatlas    450950 Jun  3 23:03 log.45006595._043071.job.log.1
[2025-06-03 23:03:41] -rw-------. 1 boincer umatlas       357 Jun  3 23:03 output.list
[2025-06-03 23:03:41] -rw-r--r--. 1 boincer umatlas       620 Jun  3 23:03 runtime_log
[2025-06-03 23:03:41] -rw-------. 1 boincer umatlas    819200 Jun  3 23:03 result.tar.gz
[2025-06-03 23:03:41] -rw-r--r--. 1 boincer umatlas      8651 Jun  3 23:03 runtime_log.err
[2025-06-03 23:03:41] -rw-------. 1 boincer umatlas       651 Jun  3 23:03 55MMDml6lg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm3dZKDmzwXj8m.diag
[2025-06-03 23:03:41] -rw-r--r--. 1 boincer umatlas     21369 Jun  3 23:03 stderr.txt
[2025-06-03 23:03:41] HITS file was successfully produced:
[2025-06-03 23:03:41] -rw-------. 1 boincer umatlas 177557908 Jun  3 23:02 shared/HITS.pool.root.1
[2025-06-03 23:03:41]  *** Contents of shared directory: ***
[2025-06-03 23:03:41] total 382424
[2025-06-03 23:03:41] -rw-r--r--. 2 boincer umatlas 212691221 Jun  3 21:47 ATLAS.root_0
[2025-06-03 23:03:41] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 21:47 start_atlas.sh
[2025-06-03 23:03:41] -rw-r--r--. 2 boincer umatlas    508883 Jun  3 21:47 input.tar.gz
[2025-06-03 23:03:41] -rw-------. 1 boincer umatlas 177557908 Jun  3 23:02 HITS.pool.root.1
[2025-06-03 23:03:41] -rw-------. 1 boincer umatlas    819200 Jun  3 23:03 result.tar.gz
23:03:43 (2800406): run_atlas exited; CPU time 37866.552343
23:03:43 (2800406): called boinc_finish(0)

</stderr_txt>
]]>

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