Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:43:23 (268042): wrapper (7.7.26015): starting
21:43:23 (268042): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 21:43:23] Arguments: --nthreads 8
[2025-06-03 21:43:23] Threads: 8
[2025-06-03 21:43:23] Checking for CVMFS
[2025-06-03 21:43:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 21:43:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 21:43:23] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 21:43:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 21:43:23] 2.12.6.0 4082173 23120 309048 146763 3 358 24098731 40960001 26023 16776704 1 318342621 99.791 170168781 27314 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 21:43:23] CVMFS is ok
[2025-06-03 21:43:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 21:43:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 21:43:23] Further information can be found at the LHC@home message board.
[2025-06-03 21:43:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 21:43:23] Checking for apptainer binary...
[2025-06-03 21:43:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 21:43:23] Running /usr/bin/apptainer --version
[2025-06-03 21:43:23] apptainer version 1.4.1-1.el9
[2025-06-03 21:43:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 21:43:23] c8-7-6.aglt2.org
[2025-06-03 21:43:23] apptainer works
[2025-06-03 21:43:23] Set ATHENA_PROC_NUMBER=8
[2025-06-03 21:43:23] Set ATHENA_CORE_NUMBER=8
[2025-06-03 21:43:23] Starting ATLAS job with PandaID=6677917882
[2025-06-03 21:43:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 22:27:35]  *** The last 200 lines of the pilot log: ***
[2025-06-03 22:27:35]  is_altstaged=None
[2025-06-03 22:27:35]  is_tar=False
[2025-06-03 22:27:35]  lfn=log.45006595._041389.job.log.tgz.1
[2025-06-03 22:27:35]  mtime=0
[2025-06-03 22:27:35]  protocol_id=None
[2025-06-03 22:27:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 22:27:35]  replicas=None
[2025-06-03 22:27:35]  scope=mc23_13p6TeV
[2025-06-03 22:27:35]  status=None
[2025-06-03 22:27:35]  status_code=0
[2025-06-03 22:27:35]  storage_token=
[2025-06-03 22:27:35]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6677917882/log.45006595._041389.job.log.tgz.1
[2025-06-03 22:27:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e1/99/log.45006595._041389.job.log.tgz.1
[2025-06-03 22:27:35]  workdir=None
[2025-06-03 22:27:35] ]
[2025-06-03 22:27:35] 2025-06-04 02:27:12,860 | INFO     | transferring file log.45006595._041389.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6677917882/log.45006595._041389.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 22:27:35] 2025-06-04 02:27:12,860 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6677917882/log.45006595._041389.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._041389.job
[2025-06-03 22:27:35] 2025-06-04 02:27:12,874 | INFO     | adding to output.list: log.45006595._041389.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e1/99/log.45006595._041389.job.log.tg
[2025-06-03 22:27:35] 2025-06-04 02:27:12,874 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 22:27:35] 2025-06-04 02:27:12,874 | INFO     | summary of transferred files:
[2025-06-03 22:27:35] 2025-06-04 02:27:12,874 | INFO     |  -- lfn=log.45006595._041389.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 22:27:35] 2025-06-04 02:27:12,875 | INFO     | stage-out finished correctly
[2025-06-03 22:27:35] 2025-06-04 02:27:13,820 | WARNING  | process 281565 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 22:27:35] 2025-06-04 02:27:13,821 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677917882/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 22:27:35] 2025-06-04 02:27:14,009 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 22:27:35] 2025-06-04 02:27:14,259 | INFO     | number of running child processes to parent process 281565: 1
[2025-06-03 22:27:35] 2025-06-04 02:27:14,259 | INFO     | maximum number of monitored processes: 6
[2025-06-03 22:27:35] 2025-06-04 02:27:16,761 | INFO     | monitor loop #195: job 0:6677917882 is in state 'finished'
[2025-06-03 22:27:35] 2025-06-04 02:27:16,763 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 22:27:35] 2025-06-04 02:27:16,816 | INFO     | job 6677917882 has state=finished
[2025-06-03 22:27:35] 2025-06-04 02:27:16,816 | INFO     | preparing for final server update for job 6677917882 in state='finished'
[2025-06-03 22:27:35] 2025-06-04 02:27:16,816 | INFO     | this job has now completed (state=finished)
[2025-06-03 22:27:35] 2025-06-04 02:27:16,816 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 22:27:35] 2025-06-04 02:27:16,816 | INFO     | log transfer has been attempted: DONE
[2025-06-03 22:27:35] 2025-06-04 02:27:16,816 | INFO     | job 6677917882 has finished - writing final server update
[2025-06-03 22:27:35] 2025-06-04 02:27:16,817 | INFO     | total number of processed events: 400 (read)
[2025-06-03 22:27:35] 2025-06-04 02:27:16,835 | INFO     | executing command: lscpu
[2025-06-03 22:27:35] 2025-06-04 02:27:16,918 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 22:27:35] 2025-06-04 02:27:19,266 | INFO     | monitor loop #196: job 0:6677917882 is in state 'finished'
[2025-06-03 22:27:35] 2025-06-04 02:27:19,266 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 22:27:35] 2025-06-04 02:27:20,778 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 22:27:35] 2025-06-04 02:27:20,778 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6677917882/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 22:27:35] 2025-06-04 02:27:20,779 | INFO     | extracted standard info from prmon json
[2025-06-03 22:27:35] 2025-06-04 02:27:20,779 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 22:27:35] 2025-06-04 02:27:20,779 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 22:27:35] 2025-06-04 02:27:20,779 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 22:27:35] 2025-06-04 02:27:20,779 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 22:27:35] 2025-06-04 02:27:20,780 | INFO     | fitting pss+swap vs Time
[2025-06-03 22:27:35] 2025-06-04 02:27:20,780 | INFO     | sum of square deviations: 14456085.0
[2025-06-03 22:27:35] 2025-06-04 02:27:20,780 | INFO     | sum of deviations: 2532421801.5
[2025-06-03 22:27:35] 2025-06-04 02:27:20,780 | INFO     | mean x: 1749002805.5
[2025-06-03 22:27:35] 2025-06-04 02:27:20,780 | INFO     | mean y: 2284547.472222222
[2025-06-03 22:27:35] 2025-06-04 02:27:20,780 | INFO     | -- intersect: -306388611433.89923
[2025-06-03 22:27:35] 2025-06-04 02:27:20,781 | INFO     | intersect: -306388611433.89923
[2025-06-03 22:27:35] 2025-06-04 02:27:20,781 | INFO     | chi2: 0.6229183611830729
[2025-06-03 22:27:35] 2025-06-04 02:27:20,781 | INFO     | -- intersect: -306388611433.89923
[2025-06-03 22:27:35] 2025-06-04 02:27:20,781 | INFO     | current memory leak: 175.18 B/s (using 36 data points, chi2=0.62)
[2025-06-03 22:27:35] 2025-06-04 02:27:20,781 | INFO     | ..............................
[2025-06-03 22:27:35] 2025-06-04 02:27:20,781 | INFO     | . Timing measurements:
[2025-06-03 22:27:35] 2025-06-04 02:27:20,781 | INFO     | . get job = 0 s
[2025-06-03 22:27:35] 2025-06-04 02:27:20,781 | INFO     | . initial setup = 2 s
[2025-06-03 22:27:35] 2025-06-04 02:27:20,781 | INFO     | . payload setup = 4 s
[2025-06-03 22:27:35] 2025-06-04 02:27:20,781 | INFO     | . stage-in = 0 s
[2025-06-03 22:27:35] 2025-06-04 02:27:20,781 | INFO     | . payload execution = 2599 s
[2025-06-03 22:27:35] 2025-06-04 02:27:20,781 | INFO     | . stage-out = 0 s
[2025-06-03 22:27:35] 2025-06-04 02:27:20,781 | INFO     | . log creation = 0 s
[2025-06-03 22:27:35] 2025-06-04 02:27:20,781 | INFO     | ..............................
[2025-06-03 22:27:35] 2025-06-04 02:27:20,833 | INFO     | 
[2025-06-03 22:27:35] 2025-06-04 02:27:20,833 | INFO     | job summary report
[2025-06-03 22:27:35] 2025-06-04 02:27:20,833 | INFO     | --------------------------------------------------
[2025-06-03 22:27:35] 2025-06-04 02:27:20,833 | INFO     | PanDA job id: 6677917882
[2025-06-03 22:27:35] 2025-06-04 02:27:20,833 | INFO     | task id: 45006595
[2025-06-03 22:27:35] 2025-06-04 02:27:20,833 | INFO     | errors: (none)
[2025-06-03 22:27:35] 2025-06-04 02:27:20,833 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 22:27:35] 2025-06-04 02:27:20,833 | INFO     | pilot state: finished 
[2025-06-03 22:27:35] 2025-06-04 02:27:20,833 | INFO     | transexitcode: 0
[2025-06-03 22:27:35] 2025-06-04 02:27:20,834 | INFO     | exeerrorcode: 0
[2025-06-03 22:27:35] 2025-06-04 02:27:20,834 | INFO     | exeerrordiag: 
[2025-06-03 22:27:35] 2025-06-04 02:27:20,834 | INFO     | exitcode: 0
[2025-06-03 22:27:35] 2025-06-04 02:27:20,834 | INFO     | exitmsg: OK
[2025-06-03 22:27:35] 2025-06-04 02:27:20,834 | INFO     | cpuconsumptiontime: 16708 s
[2025-06-03 22:27:35] 2025-06-04 02:27:20,834 | INFO     | nevents: 400
[2025-06-03 22:27:35] 2025-06-04 02:27:20,834 | INFO     | neventsw: 0
[2025-06-03 22:27:35] 2025-06-04 02:27:20,834 | INFO     | pid: 281565
[2025-06-03 22:27:35] 2025-06-04 02:27:20,834 | INFO     | pgrp: 281565
[2025-06-03 22:27:35] 2025-06-04 02:27:20,834 | INFO     | corecount: 8
[2025-06-03 22:27:35] 2025-06-04 02:27:20,834 | INFO     | event service: False
[2025-06-03 22:27:35] 2025-06-04 02:27:20,834 | INFO     | sizes: {0: 2405071, 1: 2405185, 3: 2405419, 11: 2405447, 2607: 2430602, 2608: 2439543, 2609: 2439727, 2616: 2439897}
[2025-06-03 22:27:35] 2025-06-04 02:27:20,834 | INFO     | --------------------------------------------------
[2025-06-03 22:27:35] 2025-06-04 02:27:20,834 | INFO     | 
[2025-06-03 22:27:35] 2025-06-04 02:27:20,834 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-03 22:27:35] 2025-06-04 02:27:20,853 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 22:27:35] 2025-06-04 02:27:20,853 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 22:27:35] 2025-06-04 02:27:20,853 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 22:27:35] 2025-06-04 02:27:20,853 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 22:27:35] 2025-06-04 02:27:20,853 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 22:27:35] 2025-06-04 02:27:20,853 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 22:27:35] 2025-06-04 02:27:20,853 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 22:27:35] 2025-06-04 02:27:20,853 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 22:27:35] 2025-06-04 02:27:20,853 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 22:27:35] 2025-06-04 02:27:20,853 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 22:27:35] 2025-06-04 02:27:20,853 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 22:27:35] 2025-06-04 02:27:20,853 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 22:27:35] 2025-06-04 02:27:20,853 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 22:27:35] 2025-06-04 02:27:20,853 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 22:27:35] 2025-06-04 02:27:20,853 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 22:27:35] 2025-06-04 02:27:20,854 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 22:27:35] 2025-06-04 02:27:20,854 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 22:27:35] 2025-06-04 02:27:20,854 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 22:27:35] 2025-06-04 02:27:20,854 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 22:27:35] 2025-06-04 02:27:20,854 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 22:27:35] 2025-06-04 02:27:20,854 | INFO     | job 6677917882 has completed (purged errors)
[2025-06-03 22:27:35] 2025-06-04 02:27:20,854 | INFO     | overall cleanup function is called
[2025-06-03 22:27:35] 2025-06-04 02:27:21,860 | INFO     | --- collectZombieJob: --- 10, [281565]
[2025-06-03 22:27:35] 2025-06-04 02:27:21,861 | INFO     | zombie collector waiting for pid 281565
[2025-06-03 22:27:35] 2025-06-04 02:27:21,861 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 22:27:35] 2025-06-04 02:27:21,861 | INFO     | collected zombie processes
[2025-06-03 22:27:35] 2025-06-04 02:27:21,861 | INFO     | will attempt to kill all subprocesses of pid=281565
[2025-06-03 22:27:35] 2025-06-04 02:27:22,248 | INFO     | process IDs to be killed: [281565] (in reverse order)
[2025-06-03 22:27:35] 2025-06-04 02:27:22,401 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 22:27:35] 2025-06-04 02:27:22,401 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 22:27:35] 2025-06-04 02:27:22,421 | INFO     | did not find any defunct processes belonging to 281565
[2025-06-03 22:27:35] 2025-06-04 02:27:22,445 | INFO     | did not find any defunct processes belonging to 281565
[2025-06-03 22:27:35] 2025-06-04 02:27:22,445 | INFO     | ready for new job
[2025-06-03 22:27:35] 2025-06-04 02:27:22,445 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 22:27:35] 2025-06-04 02:27:22,446 | INFO     | **************************************
[2025-06-03 22:27:35] 2025-06-04 02:27:22,447 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 22:27:35] 2025-06-04 02:27:22,447 | INFO     | **************************************
[2025-06-03 22:27:35] 2025-06-04 02:27:22,447 | INFO     | 
[2025-06-03 22:27:35] 2025-06-04 02:27:22,465 | INFO     | architecture information:
[2025-06-03 22:27:35] 2025-06-04 02:27:22,465 | INFO     | executing command: cat /etc/os-release
[2025-06-03 22:27:35] 2025-06-04 02:27:22,480 | INFO     | cat /etc/os-release:
[2025-06-03 22:27:35] NAME="CentOS Linux"
[2025-06-03 22:27:35] VERSION="7 (Core)"
[2025-06-03 22:27:35] ID="centos"
[2025-06-03 22:27:35] ID_LIKE="rhel fedora"
[2025-06-03 22:27:35] VERSION_ID="7"
[2025-06-03 22:27:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 22:27:35] ANSI_COLOR="0;31"
[2025-06-03 22:27:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 22:27:35] HOME_URL="https://www.centos.org/"
[2025-06-03 22:27:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 22:27:35] 
[2025-06-03 22:27:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 22:27:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 22:27:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 22:27:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 22:27:35] 
[2025-06-03 22:27:35] 2025-06-04 02:27:22,481 | INFO     | **************************************
[2025-06-03 22:27:35] 2025-06-04 02:27:22,984 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-03 22:27:35] 2025-06-04 02:27:23,000 | INFO     | sufficient remaining disk space (171950735360 B)
[2025-06-03 22:27:35] 2025-06-04 02:27:23,001 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 22:27:35] 2025-06-04 02:27:23,001 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 22:27:35] 2025-06-04 02:27:23,001 | INFO     | update_server=False
[2025-06-03 22:27:35] 2025-06-04 02:27:23,001 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 22:27:35] 2025-06-04 02:27:23,001 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 22:27:35] 2025-06-04 02:27:23,001 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 22:27:35] 2025-06-04 02:27:23,002 | INFO     | aborting loop
[2025-06-03 22:27:35] 2025-06-04 02:27:23,003 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 22:27:35] 2025-06-04 02:27:23,003 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 22:27:35] 2025-06-04 02:27:23,003 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 22:27:35] 2025-06-04 02:27:23,440 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 22:27:35] 2025-06-04 02:27:23,591 | INFO     | all data control threads have been joined
[2025-06-03 22:27:35] 2025-06-04 02:27:24,006 | INFO     | [job] retrieve thread has finished
[2025-06-03 22:27:35] 2025-06-04 02:27:24,007 | INFO     | [job] job monitor thread has finished
[2025-06-03 22:27:35] 2025-06-04 02:27:24,284 | INFO     | all payload control threads have been joined
[2025-06-03 22:27:35] 2025-06-04 02:27:24,391 | INFO     | [payload] validate_post thread has finished
[2025-06-03 22:27:35] 2025-06-04 02:27:24,545 | INFO     | [job] validate thread has finished
[2025-06-03 22:27:35] 2025-06-04 02:27:24,569 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 22:27:35] 2025-06-04 02:27:24,597 | INFO     | [data] control thread has finished
[2025-06-03 22:27:35] 2025-06-04 02:27:24,645 | INFO     | all job control threads have been joined
[2025-06-03 22:27:35] 2025-06-04 02:27:24,671 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 22:27:35] 2025-06-04 02:27:24,695 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 22:27:35] 2025-06-04 02:27:24,732 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 22:27:35] 2025-06-04 02:27:24,747 | INFO     | [data] copytool_in thread has finished
[2025-06-03 22:27:35] 2025-06-04 02:27:25,197 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 22:27:35] 2025-06-04 02:27:25,289 | INFO     | [payload] control thread has finished
[2025-06-03 22:27:35] 2025-06-04 02:27:25,445 | INFO     | [data] copytool_out thread has finished
[2025-06-03 22:27:35] 2025-06-04 02:27:25,475 | INFO     | [payload] failed_post thread has finished
[2025-06-03 22:27:35] 2025-06-04 02:27:25,651 | INFO     | [job] control thread has finished
[2025-06-03 22:27:35] 2025-06-04 02:27:25,843 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 22:27:35] 2025-06-04 02:27:26,848 | INFO     | [job] queue monitor thread has finished
[2025-06-03 22:27:35] 2025-06-04 02:27:28,575 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 22:27:35] 2025-06-04 02:27:30,288 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140143322105664)>', '<ExcThread(monitor, started 140143048496896)>']
[2025-06-03 22:27:35] 2025-06-04 02:27:31,038 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 22:27:35] 2025-06-04 02:27:31,039 | INFO     | [monitor] control thread has ended
[2025-06-03 22:27:35] 2025-06-04 02:27:35,314 | INFO     | all workflow threads have been joined
[2025-06-03 22:27:35] 2025-06-04 02:27:35,315 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 22:27:35] 2025-06-04 02:27:35,315 | INFO     | traces error code: 0
[2025-06-03 22:27:35] 2025-06-04 02:27:35,315 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 22:27:35] 2025-06-04 02:27:35,483 [wrapper] ==== pilot stdout END ====
[2025-06-03 22:27:35] 2025-06-04 02:27:35,486 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 22:27:35] 2025-06-04 02:27:35,488 [wrapper] pilotpid: 272121
[2025-06-03 22:27:35] 2025-06-04 02:27:35,490 [wrapper] Pilot exit status: 0
[2025-06-03 22:27:35] 2025-06-04 02:27:35,501 [wrapper] pandaids: 6677917882
[2025-06-03 22:27:35] 2025-06-04 02:27:35,611 [wrapper] cleanup supervisor_pilot 1142438 272122
[2025-06-03 22:27:35] 2025-06-04 02:27:35,614 [wrapper] Test setup, not cleaning
[2025-06-03 22:27:35] 2025-06-04 02:27:35,616 [wrapper] apfmon messages muted
[2025-06-03 22:27:35] 2025-06-04 02:27:35,618 [wrapper] ==== wrapper stdout END ====
[2025-06-03 22:27:35] 2025-06-04 02:27:35,620 [wrapper] ==== wrapper stderr END ====
[2025-06-03 22:27:35]  *** Error codes and diagnostics ***
[2025-06-03 22:27:35]     "exeErrorCode": 0,
[2025-06-03 22:27:35]     "exeErrorDiag": "",
[2025-06-03 22:27:35]     "pilotErrorCode": 0,
[2025-06-03 22:27:35]     "pilotErrorDiag": "",
[2025-06-03 22:27:35]  *** Listing of results directory ***
[2025-06-03 22:27:35] total 390480
[2025-06-03 22:27:35] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 13:46 pilot3.tar.gz
[2025-06-03 22:27:35] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 14:00 queuedata.json
[2025-06-03 22:27:35] -rwx------. 1 boincer umatlas     37140 Jun  3 14:00 runpilot2-wrapper.sh
[2025-06-03 22:27:35] -rw-r--r--. 1 boincer umatlas       100 Jun  3 21:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 22:27:35] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 21:43 run_atlas
[2025-06-03 22:27:35] -rw-r--r--. 1 boincer umatlas       105 Jun  3 21:43 job.xml
[2025-06-03 22:27:35] -rw-r--r--. 2 boincer umatlas 216461564 Jun  3 21:43 EVNT.45006593._001657.pool.root.1
[2025-06-03 22:27:35] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 21:43 start_atlas.sh
[2025-06-03 22:27:35] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 21:43 shared
[2025-06-03 22:27:35] -rw-r--r--. 2 boincer umatlas    508874 Jun  3 21:43 input.tar.gz
[2025-06-03 22:27:35] -rw-r--r--. 1 boincer umatlas         0 Jun  3 21:43 boinc_lockfile
[2025-06-03 22:27:35] -rw-r--r--. 1 boincer umatlas      2526 Jun  3 21:43 pandaJob.out
[2025-06-03 22:27:35] -rw-------. 1 boincer umatlas    986077 Jun  3 21:43 agis_schedconf.cvmfs.json
[2025-06-03 22:27:35] -rw-------. 1 boincer umatlas   1603667 Jun  3 21:43 agis_ddmendpoints.agis.ALL.json
[2025-06-03 22:27:35] drwx------. 4 boincer umatlas      4096 Jun  3 21:43 pilot3
[2025-06-03 22:27:35] -rw-r--r--. 1 boincer umatlas      7160 Jun  3 22:20 init_data.xml
[2025-06-03 22:27:35] -rw-------. 1 boincer umatlas 178420254 Jun  3 22:26 HITS.45006595._041389.pool.root.1
[2025-06-03 22:27:35] -rw-r--r--. 1 boincer umatlas       530 Jun  3 22:26 boinc_task_state.xml
[2025-06-03 22:27:35] -rw-------. 1 boincer umatlas      1036 Jun  3 22:27 memory_monitor_summary.json
[2025-06-03 22:27:35] -rw-------. 1 boincer umatlas    287049 Jun  3 22:27 log.45006595._041389.job.log.tgz.1
[2025-06-03 22:27:35] -rw-------. 1 boincer umatlas      7691 Jun  3 22:27 heartbeat.json
[2025-06-03 22:27:35] -rw-------. 1 boincer umatlas        95 Jun  3 22:27 pilot_heartbeat.json
[2025-06-03 22:27:35] -rw-------. 1 boincer umatlas      4477 Jun  3 22:27 pilotlog.txt
[2025-06-03 22:27:35] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 22:27 boinc_mmap_file
[2025-06-03 22:27:35] -rw-r--r--. 1 boincer umatlas        27 Jun  3 22:27 wrapper_checkpoint.txt
[2025-06-03 22:27:35] -rw-------. 1 boincer umatlas    281312 Jun  3 22:27 log.45006595._041389.job.log.1
[2025-06-03 22:27:35] -rw-------. 1 boincer umatlas       357 Jun  3 22:27 output.list
[2025-06-03 22:27:35] -rw-r--r--. 1 boincer umatlas       620 Jun  3 22:27 runtime_log
[2025-06-03 22:27:35] -rw-------. 1 boincer umatlas    583680 Jun  3 22:27 result.tar.gz
[2025-06-03 22:27:35] -rw-r--r--. 1 boincer umatlas      8649 Jun  3 22:27 runtime_log.err
[2025-06-03 22:27:35] -rw-------. 1 boincer umatlas       649 Jun  3 22:27 B8LLDmH7kg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVWlKDmHjMLWo.diag
[2025-06-03 22:27:35] -rw-r--r--. 1 boincer umatlas     21455 Jun  3 22:27 stderr.txt
[2025-06-03 22:27:35] HITS file was successfully produced:
[2025-06-03 22:27:35] -rw-------. 1 boincer umatlas 178420254 Jun  3 22:26 shared/HITS.pool.root.1
[2025-06-03 22:27:35]  *** Contents of shared directory: ***
[2025-06-03 22:27:35] total 386724
[2025-06-03 22:27:35] -rw-r--r--. 2 boincer umatlas 216461564 Jun  3 21:43 ATLAS.root_0
[2025-06-03 22:27:35] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 21:43 start_atlas.sh
[2025-06-03 22:27:35] -rw-r--r--. 2 boincer umatlas    508874 Jun  3 21:43 input.tar.gz
[2025-06-03 22:27:35] -rw-------. 1 boincer umatlas 178420254 Jun  3 22:26 HITS.pool.root.1
[2025-06-03 22:27:35] -rw-------. 1 boincer umatlas    583680 Jun  3 22:27 result.tar.gz
22:27:37 (268042): run_atlas exited; CPU time 16775.786588
22:27:37 (268042): called boinc_finish(0)

</stderr_txt>
]]>

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