Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
03:50:33 (2228405): wrapper (7.7.26015): starting
03:50:33 (2228405): wrapper: running run_atlas (--nthreads 12)
[2025-06-06 03:50:33] Arguments: --nthreads 12
[2025-06-06 03:50:33] Threads: 12
[2025-06-06 03:50:33] Checking for CVMFS
[2025-06-06 03:50:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-06 03:51:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-06 03:51:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-06 03:51:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-06 03:51:12] 2.13.0.0 2228635 0 25188 146838 3 1 4035287 4096000 0 130560 0 0 100.000 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-06 03:51:12] CVMFS is ok
[2025-06-06 03:51:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 03:51:12] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-06 03:51:12] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-06 03:51:12] Further information can be found at the LHC@home message board.
[2025-06-06 03:51:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 03:51:12] Checking for apptainer binary...
[2025-06-06 03:51:12] apptainer is not installed, using version from CVMFS
[2025-06-06 03:51:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 03:51:13] ws24
[2025-06-06 03:51:13] apptainer works
[2025-06-06 03:51:13] Set ATHENA_PROC_NUMBER=12
[2025-06-06 03:51:13] Set ATHENA_CORE_NUMBER=12
[2025-06-06 03:51:13] Starting ATLAS job with PandaID=6678074193
[2025-06-06 03:51:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 05:19:26]  *** The last 200 lines of the pilot log: ***
[2025-06-06 05:19:26] 2025-06-06 03:03:59,722 | INFO     | stage-out finished correctly
[2025-06-06 05:19:26] 2025-06-06 03:03:59,982 | INFO     | number of running child processes to parent process 2239302: 1
[2025-06-06 05:19:26] 2025-06-06 03:03:59,982 | INFO     | maximum number of monitored processes: 6
[2025-06-06 05:19:26] 2025-06-06 03:04:02,485 | INFO     | monitor loop #314: job 0:6678074193 is in state 'finished'
[2025-06-06 05:19:26] 2025-06-06 03:04:02,485 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:19:26] 2025-06-06 03:04:02,990 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 05:19:26] 2025-06-06 03:04:03,097 | INFO     | job 6678074193 has state=finished
[2025-06-06 05:19:26] 2025-06-06 03:04:03,097 | INFO     | preparing for final server update for job 6678074193 in state='finished'
[2025-06-06 05:19:26] 2025-06-06 03:04:03,098 | INFO     | this job has now completed (state=finished)
[2025-06-06 05:19:26] 2025-06-06 03:04:03,098 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 05:19:26] 2025-06-06 03:04:03,098 | INFO     | log transfer has been attempted: DONE
[2025-06-06 05:19:26] 2025-06-06 03:04:03,098 | INFO     | job 6678074193 has finished - writing final server update
[2025-06-06 05:19:26] 2025-06-06 03:04:03,099 | INFO     | total number of processed events: 400 (read)
[2025-06-06 05:19:26] 2025-06-06 03:04:03,111 | INFO     | executing command: lscpu
[2025-06-06 05:19:26] 2025-06-06 03:04:03,159 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 05:19:26] 2025-06-06 03:04:04,988 | INFO     | monitor loop #315: job 0:6678074193 is in state 'finished'
[2025-06-06 05:19:26] 2025-06-06 03:04:04,989 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:19:26] 2025-06-06 03:04:07,491 | INFO     | monitor loop #316: job 0:6678074193 is in state 'finished'
[2025-06-06 05:19:26] 2025-06-06 03:04:07,491 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:19:26] 2025-06-06 03:04:09,996 | INFO     | monitor loop #317: job 0:6678074193 is in state 'finished'
[2025-06-06 05:19:26] 2025-06-06 03:04:09,996 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:19:26] 2025-06-06 03:04:12,502 | INFO     | monitor loop #318: job 0:6678074193 is in state 'finished'
[2025-06-06 05:19:26] 2025-06-06 03:04:12,502 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:19:26] 2025-06-06 03:04:14,381 | INFO     | PID=2232712 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 05:19:26] 2025-06-06 03:04:15,005 | INFO     | monitor loop #319: job 0:6678074193 is in state 'finished'
[2025-06-06 05:19:26] 2025-06-06 03:04:15,005 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:19:26] 2025-06-06 03:04:15,383 | INFO     | 4305s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-06 05:19:26] 2025-06-06 03:04:17,508 | INFO     | monitor loop #320: job 0:6678074193 is in state 'finished'
[2025-06-06 05:19:26] 2025-06-06 03:04:17,508 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:19:26] 2025-06-06 03:04:20,011 | INFO     | monitor loop #321: job 0:6678074193 is in state 'finished'
[2025-06-06 05:19:26] 2025-06-06 03:04:20,011 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:19:26] 2025-06-06 03:04:22,514 | INFO     | monitor loop #322: job 0:6678074193 is in state 'finished'
[2025-06-06 05:19:26] 2025-06-06 03:04:22,514 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:19:26] 2025-06-06 03:04:25,018 | INFO     | monitor loop #323: job 0:6678074193 is in state 'finished'
[2025-06-06 05:19:26] 2025-06-06 03:04:25,018 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:19:26] 2025-06-06 03:04:27,521 | INFO     | monitor loop #324: job 0:6678074193 is in state 'finished'
[2025-06-06 05:19:26] 2025-06-06 03:04:27,521 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:19:26] 2025-06-06 03:04:30,024 | INFO     | monitor loop #325: job 0:6678074193 is in state 'finished'
[2025-06-06 05:19:26] 2025-06-06 03:04:30,024 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 05:19:26] 2025-06-06 03:04:30,608 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 05:19:26] 2025-06-06 03:04:30,608 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6678074193/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 05:19:26] 2025-06-06 03:04:30,609 | INFO     | extracted standard info from prmon json
[2025-06-06 05:19:26] 2025-06-06 03:04:30,609 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 05:19:26] 2025-06-06 03:04:30,609 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 05:19:26] 2025-06-06 03:04:30,610 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 05:19:26] 2025-06-06 03:04:30,610 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 05:19:26] 2025-06-06 03:04:30,611 | INFO     | fitting pss+swap vs Time
[2025-06-06 05:19:26] 2025-06-06 03:04:30,612 | INFO     | sum of square deviations: 77515872.0
[2025-06-06 05:19:26] 2025-06-06 03:04:30,612 | INFO     | sum of deviations: -5489243173.000001
[2025-06-06 05:19:26] 2025-06-06 03:04:30,612 | INFO     | mean x: 1749176979.0
[2025-06-06 05:19:26] 2025-06-06 03:04:30,612 | INFO     | mean y: 2759418.380952381
[2025-06-06 05:19:26] 2025-06-06 03:04:30,612 | INFO     | -- intersect: 123869750043.7914
[2025-06-06 05:19:26] 2025-06-06 03:04:30,612 | INFO     | intersect: 123869750043.7914
[2025-06-06 05:19:26] 2025-06-06 03:04:30,613 | INFO     | chi2: 0.09884197952241733
[2025-06-06 05:19:26] 2025-06-06 03:04:30,613 | INFO     | -- intersect: 123869750043.7914
[2025-06-06 05:19:26] 2025-06-06 03:04:30,613 | INFO     | current memory leak: -70.81 B/s (using 63 data points, chi2=0.10)
[2025-06-06 05:19:26] 2025-06-06 03:04:30,613 | INFO     | ..............................
[2025-06-06 05:19:26] 2025-06-06 03:04:30,613 | INFO     | . Timing measurements:
[2025-06-06 05:19:26] 2025-06-06 03:04:30,614 | INFO     | . get job = 0 s
[2025-06-06 05:19:26] 2025-06-06 03:04:30,614 | INFO     | . initial setup = 5 s
[2025-06-06 05:19:26] 2025-06-06 03:04:30,614 | INFO     | . payload setup = 7 s
[2025-06-06 05:19:26] 2025-06-06 03:04:30,614 | INFO     | . stage-in = 0 s
[2025-06-06 05:19:26] 2025-06-06 03:04:30,614 | INFO     | . payload execution = 4256 s
[2025-06-06 05:19:26] 2025-06-06 03:04:30,614 | INFO     | . stage-out = 1 s
[2025-06-06 05:19:26] 2025-06-06 03:04:30,614 | INFO     | . log creation = 0 s
[2025-06-06 05:19:26] 2025-06-06 03:04:30,614 | INFO     | ..............................
[2025-06-06 05:19:26] 2025-06-06 03:04:30,731 | INFO     | 
[2025-06-06 05:19:26] 2025-06-06 03:04:30,731 | INFO     | job summary report
[2025-06-06 05:19:26] 2025-06-06 03:04:30,732 | INFO     | --------------------------------------------------
[2025-06-06 05:19:26] 2025-06-06 03:04:30,732 | INFO     | PanDA job id: 6678074193
[2025-06-06 05:19:26] 2025-06-06 03:04:30,732 | INFO     | task id: 45006595
[2025-06-06 05:19:26] 2025-06-06 03:04:30,732 | INFO     | errors: (none)
[2025-06-06 05:19:26] 2025-06-06 03:04:30,732 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 05:19:26] 2025-06-06 03:04:30,732 | INFO     | pilot state: finished 
[2025-06-06 05:19:26] 2025-06-06 03:04:30,732 | INFO     | transexitcode: 0
[2025-06-06 05:19:26] 2025-06-06 03:04:30,732 | INFO     | exeerrorcode: 0
[2025-06-06 05:19:26] 2025-06-06 03:04:30,732 | INFO     | exeerrordiag: 
[2025-06-06 05:19:26] 2025-06-06 03:04:30,732 | INFO     | exitcode: 0
[2025-06-06 05:19:26] 2025-06-06 03:04:30,732 | INFO     | exitmsg: OK
[2025-06-06 05:19:26] 2025-06-06 03:04:30,732 | INFO     | cpuconsumptiontime: 37438 s
[2025-06-06 05:19:26] 2025-06-06 03:04:30,732 | INFO     | nevents: 400
[2025-06-06 05:19:26] 2025-06-06 03:04:30,733 | INFO     | neventsw: 0
[2025-06-06 05:19:26] 2025-06-06 03:04:30,733 | INFO     | pid: 2239302
[2025-06-06 05:19:26] 2025-06-06 03:04:30,733 | INFO     | pgrp: 2239302
[2025-06-06 05:19:26] 2025-06-06 03:04:30,733 | INFO     | corecount: 12
[2025-06-06 05:19:26] 2025-06-06 03:04:30,733 | INFO     | event service: False
[2025-06-06 05:19:26] 2025-06-06 03:04:30,733 | INFO     | sizes: {0: 2397178, 1: 2397377, 5: 2397583, 11: 2397639, 4268: 2423369, 4269: 2432324, 4273: 2432508, 4300: 2432678}
[2025-06-06 05:19:26] 2025-06-06 03:04:30,733 | INFO     | --------------------------------------------------
[2025-06-06 05:19:26] 2025-06-06 03:04:30,733 | INFO     | 
[2025-06-06 05:19:26] 2025-06-06 03:04:30,733 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-06 05:19:26] 2025-06-06 03:04:30,783 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 05:19:26] 2025-06-06 03:04:30,783 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 05:19:26] 2025-06-06 03:04:30,783 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 05:19:26] 2025-06-06 03:04:30,783 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 05:19:26] 2025-06-06 03:04:30,783 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 05:19:26] 2025-06-06 03:04:30,784 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 05:19:26] 2025-06-06 03:04:30,784 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 05:19:26] 2025-06-06 03:04:30,784 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 05:19:26] 2025-06-06 03:04:30,784 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 05:19:26] 2025-06-06 03:04:30,784 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 05:19:26] 2025-06-06 03:04:30,784 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 05:19:26] 2025-06-06 03:04:30,784 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 05:19:26] 2025-06-06 03:04:30,784 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 05:19:26] 2025-06-06 03:04:30,784 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 05:19:26] 2025-06-06 03:04:30,784 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 05:19:26] 2025-06-06 03:04:30,784 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 05:19:26] 2025-06-06 03:04:30,784 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 05:19:26] 2025-06-06 03:04:30,785 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 05:19:26] 2025-06-06 03:04:30,785 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 05:19:26] 2025-06-06 03:04:30,785 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 05:19:26] 2025-06-06 03:04:30,785 | INFO     | job 6678074193 has completed (purged errors)
[2025-06-06 05:19:26] 2025-06-06 03:04:30,785 | INFO     | overall cleanup function is called
[2025-06-06 05:19:26] 2025-06-06 03:04:31,796 | INFO     | --- collectZombieJob: --- 10, [2239302]
[2025-06-06 05:19:26] 2025-06-06 03:04:31,796 | INFO     | zombie collector waiting for pid 2239302
[2025-06-06 05:19:26] 2025-06-06 03:04:31,796 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 05:19:26] 2025-06-06 03:04:31,797 | INFO     | collected zombie processes
[2025-06-06 05:19:26] 2025-06-06 03:04:31,797 | INFO     | will attempt to kill all subprocesses of pid=2239302
[2025-06-06 05:19:26] 2025-06-06 03:04:32,053 | INFO     | process IDs to be killed: [2239302] (in reverse order)
[2025-06-06 05:19:26] 2025-06-06 03:04:32,232 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 05:19:26] 2025-06-06 03:04:32,232 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 05:19:26] 2025-06-06 03:04:32,242 | INFO     | did not find any defunct processes belonging to 2239302
[2025-06-06 05:19:26] 2025-06-06 03:04:32,250 | INFO     | did not find any defunct processes belonging to 2239302
[2025-06-06 05:19:26] 2025-06-06 03:04:32,250 | INFO     | ready for new job
[2025-06-06 05:19:26] 2025-06-06 03:04:32,250 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 05:19:26] 2025-06-06 03:04:32,252 | INFO     | **************************************
[2025-06-06 05:19:26] 2025-06-06 03:04:32,252 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 05:19:26] 2025-06-06 03:04:32,252 | INFO     | **************************************
[2025-06-06 05:19:26] 2025-06-06 03:04:32,252 | INFO     | 
[2025-06-06 05:19:26] 2025-06-06 03:04:32,253 | INFO     | architecture information:
[2025-06-06 05:19:26] 2025-06-06 03:04:32,254 | INFO     | executing command: cat /etc/os-release
[2025-06-06 05:19:26] 2025-06-06 03:04:32,287 | INFO     | cat /etc/os-release:
[2025-06-06 05:19:26] NAME="CentOS Linux"
[2025-06-06 05:19:26] VERSION="7 (Core)"
[2025-06-06 05:19:26] ID="centos"
[2025-06-06 05:19:26] ID_LIKE="rhel fedora"
[2025-06-06 05:19:26] VERSION_ID="7"
[2025-06-06 05:19:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 05:19:26] ANSI_COLOR="0;31"
[2025-06-06 05:19:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 05:19:26] HOME_URL="https://www.centos.org/"
[2025-06-06 05:19:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 05:19:26] 
[2025-06-06 05:19:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 05:19:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 05:19:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 05:19:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 05:19:26] 
[2025-06-06 05:19:26] 2025-06-06 03:04:32,287 | INFO     | **************************************
[2025-06-06 05:19:26] 2025-06-06 03:04:32,793 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-06 05:19:26] 2025-06-06 03:04:32,835 | INFO     | sufficient remaining disk space (19213058048 B)
[2025-06-06 05:19:26] 2025-06-06 03:04:32,835 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 05:19:26] 2025-06-06 03:04:32,835 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 05:19:26] 2025-06-06 03:04:32,836 | INFO     | update_server=False
[2025-06-06 05:19:26] 2025-06-06 03:04:32,836 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 05:19:26] 2025-06-06 03:04:32,836 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 05:19:26] 2025-06-06 03:04:32,836 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 05:19:26] 2025-06-06 03:04:32,836 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 05:19:26] 2025-06-06 03:04:32,836 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 05:19:26] 2025-06-06 03:04:32,915 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 05:19:26] 2025-06-06 03:04:33,208 | INFO     | all data control threads have been joined
[2025-06-06 05:19:26] 2025-06-06 03:04:33,244 | INFO     | all payload control threads have been joined
[2025-06-06 05:19:26] 2025-06-06 03:04:33,533 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:19:26] 2025-06-06 03:04:33,534 | INFO     | aborting loop
[2025-06-06 05:19:26] 2025-06-06 03:04:33,840 | INFO     | [job] retrieve thread has finished
[2025-06-06 05:19:26] 2025-06-06 03:04:34,000 | INFO     | [payload] failed_post thread has finished
[2025-06-06 05:19:26] 2025-06-06 03:04:34,014 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 05:19:26] 2025-06-06 03:04:34,185 | INFO     | all job control threads have been joined
[2025-06-06 05:19:26] 2025-06-06 03:04:34,214 | INFO     | [data] control thread has finished
[2025-06-06 05:19:26] 2025-06-06 03:04:34,249 | INFO     | [payload] control thread has finished
[2025-06-06 05:19:26] 2025-06-06 03:04:34,538 | INFO     | [job] job monitor thread has finished
[2025-06-06 05:19:26] 2025-06-06 03:04:34,551 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 05:19:26] 2025-06-06 03:04:34,554 | INFO     | [job] validate thread has finished
[2025-06-06 05:19:26] 2025-06-06 03:04:34,648 | INFO     | [data] copytool_in thread has finished
[2025-06-06 05:19:26] 2025-06-06 03:04:34,664 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 05:19:26] 2025-06-06 03:04:34,920 | INFO     | [data] copytool_out thread has finished
[2025-06-06 05:19:26] 2025-06-06 03:04:34,981 | INFO     | [payload] validate_post thread has finished
[2025-06-06 05:19:26] 2025-06-06 03:04:35,190 | INFO     | [job] control thread has finished
[2025-06-06 05:19:26] 2025-06-06 03:04:35,742 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 05:19:26] 2025-06-06 03:04:36,127 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 05:19:26] 2025-06-06 03:04:36,747 | INFO     | [job] queue monitor thread has finished
[2025-06-06 05:19:26] 2025-06-06 03:04:40,132 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 05:19:26] 2025-06-06 03:04:43,759 | INFO     | job.realtimelogging is not enabled
[2025-06-06 05:19:26] 2025-06-06 03:04:44,764 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 05:19:26] 2025-06-06 03:04:46,101 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126271591565120)>', '<ExcThread(monitor, started 126271191230208)>']
[2025-06-06 05:19:26] 2025-06-06 03:04:46,908 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 05:19:26] 2025-06-06 03:04:46,908 | INFO     | [monitor] control thread has ended
[2025-06-06 05:19:26] 2025-06-06 03:04:51,126 | INFO     | all workflow threads have been joined
[2025-06-06 05:19:26] 2025-06-06 03:04:51,126 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 05:19:26] 2025-06-06 03:04:51,127 | INFO     | traces error code: 0
[2025-06-06 05:19:26] 2025-06-06 03:04:51,127 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 05:19:26] 2025-06-06 03:04:51,308 [wrapper] ==== pilot stdout END ====
[2025-06-06 05:19:26] 2025-06-06 03:04:51,323 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 05:19:26] 2025-06-06 03:04:51,334 [wrapper] pilotpid: 2232712
[2025-06-06 05:19:26] 2025-06-06 03:04:51,342 [wrapper] Pilot exit status: 0
[2025-06-06 05:19:26] 2025-06-06 03:04:51,387 [wrapper] pandaids: 6678074193
[2025-06-06 05:19:26] 2025-06-06 03:04:51,466 [wrapper] cleanup supervisor_pilot 2249161 2232713
[2025-06-06 05:19:26] 2025-06-06 03:04:51,483 [wrapper] Test setup, not cleaning
[2025-06-06 05:19:26] 2025-06-06 03:04:51,493 [wrapper] apfmon messages muted
[2025-06-06 05:19:26] 2025-06-06 03:04:51,501 [wrapper] ==== wrapper stdout END ====
[2025-06-06 05:19:26] 2025-06-06 03:04:51,510 [wrapper] ==== wrapper stderr END ====
[2025-06-06 05:19:26]  *** Error codes and diagnostics ***
[2025-06-06 05:19:26]     "exeErrorCode": 0,
[2025-06-06 05:19:26]     "exeErrorDiag": "",
[2025-06-06 05:19:26]     "pilotErrorCode": 0,
[2025-06-06 05:19:26]     "pilotErrorDiag": "",
[2025-06-06 05:19:26]  *** Listing of results directory ***
[2025-06-06 05:19:26] total 388480
[2025-06-06 05:19:26] -rw-r--r-- 1 boinc boinc    495897 Jun  3 22:49 pilot3.tar.gz
[2025-06-06 05:19:26] -rw-r--r-- 1 boinc boinc      5111 Jun  3 23:03 queuedata.json
[2025-06-06 05:19:26] -rwx------ 1 boinc boinc     37140 Jun  3 23:04 runpilot2-wrapper.sh
[2025-06-06 05:19:26] -rw-r--r-- 1 boinc boinc       100 Jun  6 03:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 05:19:26] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 03:50 run_atlas
[2025-06-06 05:19:26] -rw-r--r-- 1 boinc boinc       105 Jun  6 03:50 job.xml
[2025-06-06 05:19:26] -rw-r--r-- 2 boinc boinc 216133365 Jun  6 03:50 EVNT.45006593._001833.pool.root.1
[2025-06-06 05:19:26] -rw-r--r-- 1 boinc boinc      9498 Jun  6 03:50 init_data.xml
[2025-06-06 05:19:26] drwxrwx--x 2 boinc boinc      4096 Jun  6 03:50 shared
[2025-06-06 05:19:26] -rw-r--r-- 2 boinc boinc    508883 Jun  6 03:50 input.tar.gz
[2025-06-06 05:19:26] -rw-r--r-- 2 boinc boinc     15093 Jun  6 03:50 start_atlas.sh
[2025-06-06 05:19:26] -rw-r--r-- 1 boinc boinc         0 Jun  6 03:50 boinc_lockfile
[2025-06-06 05:19:26] -rw-r--r-- 1 boinc boinc      2525 Jun  6 03:51 pandaJob.out
[2025-06-06 05:19:26] -rw------- 1 boinc boinc    987721 Jun  6 03:52 agis_schedconf.cvmfs.json
[2025-06-06 05:19:26] -rw------- 1 boinc boinc   1598969 Jun  6 03:52 agis_ddmendpoints.agis.ALL.json
[2025-06-06 05:19:26] drwx------ 4 boinc boinc      4096 Jun  6 03:52 pilot3
[2025-06-06 05:19:26] -rw------- 1 boinc boinc 176253567 Jun  6 05:03 HITS.45006595._045706.pool.root.1
[2025-06-06 05:19:26] -rw-r--r-- 1 boinc boinc       529 Jun  6 05:03 boinc_task_state.xml
[2025-06-06 05:19:26] -rw------- 1 boinc boinc      1021 Jun  6 05:03 memory_monitor_summary.json
[2025-06-06 05:19:26] -rw------- 1 boinc boinc    371702 Jun  6 05:03 log.45006595._045706.job.log.tgz.1
[2025-06-06 05:19:26] -rw------- 1 boinc boinc        95 Jun  6 05:04 pilot_heartbeat.json
[2025-06-06 05:19:26] -rw------- 1 boinc boinc      7648 Jun  6 05:04 heartbeat.json
[2025-06-06 05:19:26] -rw------- 1 boinc boinc      4555 Jun  6 05:04 pilotlog.txt
[2025-06-06 05:19:26] -rw------- 1 boinc boinc    415784 Jun  6 05:04 log.45006595._045706.job.log.1
[2025-06-06 05:19:26] -rw------- 1 boinc boinc       357 Jun  6 05:04 output.list
[2025-06-06 05:19:26] -rw-r--r-- 1 boinc boinc       620 Jun  6 05:04 runtime_log
[2025-06-06 05:19:26] -rw------- 1 boinc boinc    808960 Jun  6 05:04 result.tar.gz
[2025-06-06 05:19:26] -rw-r--r-- 1 boinc boinc      8686 Jun  6 05:04 runtime_log.err
[2025-06-06 05:19:26] -rw------- 1 boinc boinc       639 Jun  6 05:04 5K3MDm2yng7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmADmKDmHCVrBn.diag
[2025-06-06 05:19:26] -rw-r--r-- 1 boinc boinc        27 Jun  6 05:19 wrapper_checkpoint.txt
[2025-06-06 05:19:26] -rw-r--r-- 1 boinc boinc      8192 Jun  6 05:19 boinc_mmap_file
[2025-06-06 05:19:26] -rw-r--r-- 1 boinc boinc     22337 Jun  6 05:19 stderr.txt
[2025-06-06 05:19:26] HITS file was successfully produced:
[2025-06-06 05:19:26] -rw------- 1 boinc boinc 176253567 Jun  6 05:03 shared/HITS.pool.root.1
[2025-06-06 05:19:26]  *** Contents of shared directory: ***
[2025-06-06 05:19:26] total 384508
[2025-06-06 05:19:26] -rw-r--r-- 2 boinc boinc 216133365 Jun  6 03:50 ATLAS.root_0
[2025-06-06 05:19:26] -rw-r--r-- 2 boinc boinc    508883 Jun  6 03:50 input.tar.gz
[2025-06-06 05:19:26] -rw-r--r-- 2 boinc boinc     15093 Jun  6 03:50 start_atlas.sh
[2025-06-06 05:19:26] -rw------- 1 boinc boinc 176253567 Jun  6 05:03 HITS.pool.root.1
[2025-06-06 05:19:26] -rw------- 1 boinc boinc    808960 Jun  6 05:04 result.tar.gz
05:19:28 (2228405): run_atlas exited; CPU time 37258.111969
05:19:28 (2228405): called boinc_finish(0)

</stderr_txt>
]]>

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