Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:31:42 (2283337): wrapper (7.7.26015): starting
12:31:42 (2283337): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 12:31:42] Arguments: --nthreads 8
[2025-06-04 12:31:42] Threads: 8
[2025-06-04 12:31:42] Checking for CVMFS
[2025-06-04 12:31:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 12:31:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 12:31:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 12:31:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 12:31:42] 2.12.7.0 1328384 2451 72812 146777 1 55 2981041 4096001 0 65024 0 2370853 99.992 601078 2377 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-04 12:31:42] CVMFS is ok
[2025-06-04 12:31:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 12:31:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 12:31:42] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-04 12:31:42] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-04 12:31:42] Further information can be found at the LHC@home message board.
[2025-06-04 12:31:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:31:42] Checking for apptainer binary...
[2025-06-04 12:31:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 12:31:42] Running /usr/bin/apptainer --version
[2025-06-04 12:31:42] apptainer version 1.3.6-1.el8
[2025-06-04 12:31:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:31:42] localhost.localdomain
[2025-06-04 12:31:42] apptainer works
[2025-06-04 12:31:42] Set ATHENA_PROC_NUMBER=8
[2025-06-04 12:31:42] Set ATHENA_CORE_NUMBER=8
[2025-06-04 12:31:42] Starting ATLAS job with PandaID=6678074192
[2025-06-04 12:31:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:39:46]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:39:46]  storage_token=
[2025-06-04 13:39:46]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6678074192/log.45006595._045705.job.log.tgz.1
[2025-06-04 13:39:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/ea/log.45006595._045705.job.log.tgz.1
[2025-06-04 13:39:46]  workdir=None
[2025-06-04 13:39:46] ]
[2025-06-04 13:39:46] 2025-06-04 11:39:17,299 | INFO     | transferring file log.45006595._045705.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6678074192/log.45006595._045705.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 13:39:46] 2025-06-04 11:39:17,299 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6678074192/log.45006595._045705.job.log.tgz.1 /var/lib/boinc/slots/0/log.45006595._045705.job
[2025-06-04 13:39:46] 2025-06-04 11:39:17,312 | INFO     | adding to output.list: log.45006595._045705.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/ea/log.45006595._045705.job.log.tg
[2025-06-04 13:39:46] 2025-06-04 11:39:17,313 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 13:39:46] 2025-06-04 11:39:17,313 | INFO     | summary of transferred files:
[2025-06-04 13:39:46] 2025-06-04 11:39:17,313 | INFO     |  -- lfn=log.45006595._045705.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 13:39:46] 2025-06-04 11:39:17,313 | INFO     | stage-out finished correctly
[2025-06-04 13:39:46] 2025-06-04 11:39:17,360 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 13:39:46] 2025-06-04 11:39:17,415 | INFO     | job 6678074192 has state=finished
[2025-06-04 13:39:46] 2025-06-04 11:39:17,415 | INFO     | preparing for final server update for job 6678074192 in state='finished'
[2025-06-04 13:39:46] 2025-06-04 11:39:17,416 | INFO     | this job has now completed (state=finished)
[2025-06-04 13:39:46] 2025-06-04 11:39:17,416 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 13:39:46] 2025-06-04 11:39:17,416 | INFO     | log transfer has been attempted: DONE
[2025-06-04 13:39:46] 2025-06-04 11:39:17,416 | INFO     | job 6678074192 has finished - writing final server update
[2025-06-04 13:39:46] 2025-06-04 11:39:17,416 | INFO     | total number of processed events: 400 (read)
[2025-06-04 13:39:46] 2025-06-04 11:39:17,417 | INFO     | executing command: lscpu
[2025-06-04 13:39:46] 2025-06-04 11:39:17,431 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 13:39:46] 2025-06-04 11:39:19,907 | WARNING  | process 2293445 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 13:39:46] 2025-06-04 11:39:19,908 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6678074192/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:39:46] 2025-06-04 11:39:19,909 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6678074192/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:39:46] 2025-06-04 11:39:19,910 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3578507 B
[2025-06-04 13:39:46] 2025-06-04 11:39:19,910 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15789 B
[2025-06-04 13:39:46] 2025-06-04 11:39:19,910 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-04 13:39:46] 2025-06-04 11:39:21,386 | INFO     | PID=2286996 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 13:39:46] 2025-06-04 11:39:26,284 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 13:39:46] 2025-06-04 11:39:26,288 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6678074192/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:39:46] 2025-06-04 11:39:26,288 | INFO     | extracted standard info from prmon json
[2025-06-04 13:39:46] 2025-06-04 11:39:26,289 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 13:39:46] 2025-06-04 11:39:26,289 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 13:39:46] 2025-06-04 11:39:26,289 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 13:39:46] 2025-06-04 11:39:26,289 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:39:46] 2025-06-04 11:39:26,291 | INFO     | fitting pss+swap vs Time
[2025-06-04 13:39:46] 2025-06-04 11:39:26,291 | INFO     | sum of square deviations: 63666310.0
[2025-06-04 13:39:46] 2025-06-04 11:39:26,291 | INFO     | sum of deviations: -10092968927.0
[2025-06-04 13:39:46] 2025-06-04 11:39:26,291 | INFO     | mean x: 1749035209.0
[2025-06-04 13:39:46] 2025-06-04 11:39:26,291 | INFO     | mean y: 2812523.694915254
[2025-06-04 13:39:46] 2025-06-04 11:39:26,291 | INFO     | -- intersect: 277275957718.7902
[2025-06-04 13:39:46] 2025-06-04 11:39:26,292 | INFO     | intersect: 277275957718.7902
[2025-06-04 13:39:46] 2025-06-04 11:39:26,292 | INFO     | chi2: 0.10585328959108971
[2025-06-04 13:39:46] 2025-06-04 11:39:26,292 | INFO     | -- intersect: 277275957718.7902
[2025-06-04 13:39:46] 2025-06-04 11:39:26,292 | INFO     | current memory leak: -158.53 B/s (using 59 data points, chi2=0.11)
[2025-06-04 13:39:46] 2025-06-04 11:39:26,292 | INFO     | ..............................
[2025-06-04 13:39:46] 2025-06-04 11:39:26,292 | INFO     | . Timing measurements:
[2025-06-04 13:39:46] 2025-06-04 11:39:26,292 | INFO     | . get job = 0 s
[2025-06-04 13:39:46] 2025-06-04 11:39:26,292 | INFO     | . initial setup = 1 s
[2025-06-04 13:39:46] 2025-06-04 11:39:26,293 | INFO     | . payload setup = 7 s
[2025-06-04 13:39:46] 2025-06-04 11:39:26,293 | INFO     | . stage-in = 0 s
[2025-06-04 13:39:46] 2025-06-04 11:39:26,293 | INFO     | . payload execution = 4021 s
[2025-06-04 13:39:46] 2025-06-04 11:39:26,293 | INFO     | . stage-out = 0 s
[2025-06-04 13:39:46] 2025-06-04 11:39:26,293 | INFO     | . log creation = 0 s
[2025-06-04 13:39:46] 2025-06-04 11:39:26,293 | INFO     | ..............................
[2025-06-04 13:39:46] 2025-06-04 11:39:26,304 | INFO     | sufficient remaining disk space (41302360064 B)
[2025-06-04 13:39:46] 2025-06-04 11:39:26,310 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-04 13:39:46] 2025-06-04 11:39:26,358 | INFO     | size of work directory /var/lib/boinc/slots/0/PanDA_Pilot-6678074192: 3872460 B (within 2537553920 B limit)
[2025-06-04 13:39:46] 2025-06-04 11:39:26,358 | INFO     | pfn file=/var/lib/boinc/slots/0/PanDA_Pilot-6678074192/HITS.45006595._045705.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-04 13:39:46] 2025-06-04 11:39:26,358 | INFO     | total size of present files: 0 B (workdir size: 3872460 B)
[2025-06-04 13:39:46] 2025-06-04 11:39:26,358 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/0/PanDA_Pilot-6678074192/HITS.45006595._045705.pool.root.1 since it does not exist
[2025-06-04 13:39:46] 2025-06-04 11:39:26,362 | INFO     | 
[2025-06-04 13:39:46] 2025-06-04 11:39:26,362 | INFO     | job summary report
[2025-06-04 13:39:46] 2025-06-04 11:39:26,362 | INFO     | --------------------------------------------------
[2025-06-04 13:39:46] 2025-06-04 11:39:26,362 | INFO     | PanDA job id: 6678074192
[2025-06-04 13:39:46] 2025-06-04 11:39:26,362 | INFO     | task id: 45006595
[2025-06-04 13:39:46] 2025-06-04 11:39:26,362 | INFO     | errors: (none)
[2025-06-04 13:39:46] 2025-06-04 11:39:26,362 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:39:46] 2025-06-04 11:39:26,362 | INFO     | pilot state: finished 
[2025-06-04 13:39:46] 2025-06-04 11:39:26,362 | INFO     | transexitcode: 0
[2025-06-04 13:39:46] 2025-06-04 11:39:26,363 | INFO     | exeerrorcode: 0
[2025-06-04 13:39:46] 2025-06-04 11:39:26,363 | INFO     | exeerrordiag: 
[2025-06-04 13:39:46] 2025-06-04 11:39:26,363 | INFO     | exitcode: 0
[2025-06-04 13:39:46] 2025-06-04 11:39:26,363 | INFO     | exitmsg: OK
[2025-06-04 13:39:46] 2025-06-04 11:39:26,363 | INFO     | cpuconsumptiontime: 28182 s
[2025-06-04 13:39:46] 2025-06-04 11:39:26,363 | INFO     | nevents: 400
[2025-06-04 13:39:46] 2025-06-04 11:39:26,363 | INFO     | neventsw: 0
[2025-06-04 13:39:46] 2025-06-04 11:39:26,363 | INFO     | pid: 2293445
[2025-06-04 13:39:46] 2025-06-04 11:39:26,363 | INFO     | pgrp: 2293445
[2025-06-04 13:39:46] 2025-06-04 11:39:26,363 | INFO     | corecount: 8
[2025-06-04 13:39:46] 2025-06-04 11:39:26,363 | INFO     | event service: False
[2025-06-04 13:39:46] 2025-06-04 11:39:26,363 | INFO     | sizes: {0: 2405184, 1: 2405184, 3: 2405418, 11: 2405446, 4031: 2431263, 4032: 2440388, 4041: 2440502}
[2025-06-04 13:39:46] 2025-06-04 11:39:26,363 | INFO     | --------------------------------------------------
[2025-06-04 13:39:46] 2025-06-04 11:39:26,363 | INFO     | 
[2025-06-04 13:39:46] 2025-06-04 11:39:26,363 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-06-04 13:39:46] 2025-06-04 11:39:26,378 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:39:46] 2025-06-04 11:39:26,382 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:39:46] 2025-06-04 11:39:26,382 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:39:46] 2025-06-04 11:39:26,382 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:39:46] 2025-06-04 11:39:26,382 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:39:46] 2025-06-04 11:39:26,382 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:39:46] 2025-06-04 11:39:26,383 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:39:46] 2025-06-04 11:39:26,383 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:39:46] 2025-06-04 11:39:26,383 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:39:46] 2025-06-04 11:39:26,383 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:39:46] 2025-06-04 11:39:26,383 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:39:46] 2025-06-04 11:39:26,383 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:39:46] 2025-06-04 11:39:26,383 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:39:46] 2025-06-04 11:39:26,383 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:39:46] 2025-06-04 11:39:26,383 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:39:46] 2025-06-04 11:39:26,383 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:39:46] 2025-06-04 11:39:26,384 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:39:46] 2025-06-04 11:39:26,384 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:39:46] 2025-06-04 11:39:26,384 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:39:46] 2025-06-04 11:39:26,384 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:39:46] 2025-06-04 11:39:26,384 | INFO     | job 6678074192 has completed (purged errors)
[2025-06-04 13:39:46] 2025-06-04 11:39:26,384 | INFO     | overall cleanup function is called
[2025-06-04 13:39:46] 2025-06-04 11:39:26,439 | INFO     | number of running child processes to parent process 2293445: 1
[2025-06-04 13:39:46] 2025-06-04 11:39:26,440 | INFO     | maximum number of monitored processes: 6
[2025-06-04 13:39:46] 2025-06-04 11:39:26,440 | INFO     | aborting job monitoring since job object (job id=6678074192) has expired
[2025-06-04 13:39:46] 2025-06-04 11:39:27,399 | INFO     | --- collectZombieJob: --- 10, [2293445]
[2025-06-04 13:39:46] 2025-06-04 11:39:27,399 | INFO     | zombie collector waiting for pid 2293445
[2025-06-04 13:39:46] 2025-06-04 11:39:27,399 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:39:46] 2025-06-04 11:39:27,399 | INFO     | collected zombie processes
[2025-06-04 13:39:46] 2025-06-04 11:39:27,400 | INFO     | will attempt to kill all subprocesses of pid=2293445
[2025-06-04 13:39:46] 2025-06-04 11:39:27,468 | INFO     | process IDs to be killed: [2293445] (in reverse order)
[2025-06-04 13:39:46] 2025-06-04 11:39:27,498 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:39:46] 2025-06-04 11:39:27,498 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:39:46] 2025-06-04 11:39:27,501 | INFO     | did not find any defunct processes belonging to 2293445
[2025-06-04 13:39:46] 2025-06-04 11:39:27,503 | INFO     | did not find any defunct processes belonging to 2293445
[2025-06-04 13:39:46] 2025-06-04 11:39:27,503 | INFO     | ready for new job
[2025-06-04 13:39:46] 2025-06-04 11:39:27,503 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:39:46] 2025-06-04 11:39:27,504 | INFO     | **************************************
[2025-06-04 13:39:46] 2025-06-04 11:39:27,504 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:39:46] 2025-06-04 11:39:27,504 | INFO     | **************************************
[2025-06-04 13:39:46] 2025-06-04 11:39:27,504 | INFO     | 
[2025-06-04 13:39:46] 2025-06-04 11:39:27,505 | INFO     | pilot is running in a VM
[2025-06-04 13:39:46] 2025-06-04 11:39:27,505 | INFO     | architecture information:
[2025-06-04 13:39:46] 2025-06-04 11:39:27,505 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:39:46] 2025-06-04 11:39:27,515 | INFO     | cat /etc/os-release:
[2025-06-04 13:39:46] NAME="CentOS Linux"
[2025-06-04 13:39:46] VERSION="7 (Core)"
[2025-06-04 13:39:46] ID="centos"
[2025-06-04 13:39:46] ID_LIKE="rhel fedora"
[2025-06-04 13:39:46] VERSION_ID="7"
[2025-06-04 13:39:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:39:46] ANSI_COLOR="0;31"
[2025-06-04 13:39:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:39:46] HOME_URL="https://www.centos.org/"
[2025-06-04 13:39:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:39:46] 
[2025-06-04 13:39:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:39:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:39:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:39:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:39:46] 
[2025-06-04 13:39:46] 2025-06-04 11:39:27,516 | INFO     | **************************************
[2025-06-04 13:39:46] 2025-06-04 11:39:28,019 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-04 13:39:46] 2025-06-04 11:39:28,031 | INFO     | sufficient remaining disk space (41306554368 B)
[2025-06-04 13:39:46] 2025-06-04 11:39:28,031 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:39:46] 2025-06-04 11:39:28,031 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:39:46] 2025-06-04 11:39:28,031 | INFO     | update_server=False
[2025-06-04 13:39:46] 2025-06-04 11:39:28,032 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:39:46] 2025-06-04 11:39:28,032 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 13:39:46] 2025-06-04 11:39:28,032 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:39:46] 2025-06-04 11:39:28,032 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:39:46] 2025-06-04 11:39:28,032 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:39:46] 2025-06-04 11:39:28,032 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:39:46] 2025-06-04 11:39:28,033 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:39:46] 2025-06-04 11:39:28,033 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:39:46] 2025-06-04 11:39:28,033 | INFO     | aborting loop
[2025-06-04 13:39:46] 2025-06-04 11:39:28,033 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:39:46] 2025-06-04 11:39:28,117 | INFO     | all data control threads have been joined
[2025-06-04 13:39:46] 2025-06-04 11:39:28,944 | INFO     | all job control threads have been joined
[2025-06-04 13:39:46] 2025-06-04 11:39:29,036 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:39:46] 2025-06-04 11:39:29,037 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:39:46] 2025-06-04 11:39:29,037 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:39:46] 2025-06-04 11:39:29,117 | INFO     | [data] control thread has finished
[2025-06-04 13:39:46] 2025-06-04 11:39:29,357 | INFO     | all payload control threads have been joined
[2025-06-04 13:39:46] 2025-06-04 11:39:29,410 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:39:46] 2025-06-04 11:39:29,505 | INFO     | [job] validate thread has finished
[2025-06-04 13:39:46] 2025-06-04 11:39:29,574 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:39:46] 2025-06-04 11:39:29,631 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:39:46] 2025-06-04 11:39:29,817 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:39:46] 2025-06-04 11:39:29,950 | INFO     | [job] control thread has finished
[2025-06-04 13:39:46] 2025-06-04 11:39:30,004 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:39:46] 2025-06-04 11:39:30,033 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:39:46] 2025-06-04 11:39:30,362 | INFO     | [payload] control thread has finished
[2025-06-04 13:39:46] 2025-06-04 11:39:30,411 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:39:46] 2025-06-04 11:39:32,039 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:39:46] 2025-06-04 11:39:38,951 | INFO     | job.realtimelogging is not enabled
[2025-06-04 13:39:46] 2025-06-04 11:39:39,957 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:39:46] 2025-06-04 11:39:40,768 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140607241926464)>', '<ExcThread(monitor, started 140606223415040)>']
[2025-06-04 13:39:46] 2025-06-04 11:39:41,099 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:39:46] 2025-06-04 11:39:41,099 | INFO     | [monitor] control thread has ended
[2025-06-04 13:39:46] 2025-06-04 11:39:45,794 | INFO     | all workflow threads have been joined
[2025-06-04 13:39:46] 2025-06-04 11:39:45,794 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:39:46] 2025-06-04 11:39:45,794 | INFO     | traces error code: 0
[2025-06-04 13:39:46] 2025-06-04 11:39:45,794 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:39:46] 2025-06-04 11:39:45,871 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:39:46] 2025-06-04 11:39:45,873 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:39:46] 2025-06-04 11:39:45,876 [wrapper] pilotpid: 2286996
[2025-06-04 13:39:46] 2025-06-04 11:39:45,878 [wrapper] Pilot exit status: 0
[2025-06-04 13:39:46] 2025-06-04 11:39:45,888 [wrapper] pandaids: 6678074192
[2025-06-04 13:39:46] 2025-06-04 11:39:45,909 [wrapper] cleanup supervisor_pilot 2304806 2286997
[2025-06-04 13:39:46] 2025-06-04 11:39:45,911 [wrapper] Test setup, not cleaning
[2025-06-04 13:39:46] 2025-06-04 11:39:45,914 [wrapper] apfmon messages muted
[2025-06-04 13:39:46] 2025-06-04 11:39:45,916 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:39:46] 2025-06-04 11:39:45,919 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:39:46]  *** Error codes and diagnostics ***
[2025-06-04 13:39:46]     "exeErrorCode": 0,
[2025-06-04 13:39:46]     "exeErrorDiag": "",
[2025-06-04 13:39:46]     "pilotErrorCode": 0,
[2025-06-04 13:39:46]     "pilotErrorDiag": "",
[2025-06-04 13:39:46]  *** Listing of results directory ***
[2025-06-04 13:39:46] total 391296
[2025-06-04 13:39:46] -rw-r--r--. 1 boinc boinc    495897 Jun  3 22:49 pilot3.tar.gz
[2025-06-04 13:39:46] -rw-r--r--. 1 boinc boinc      5111 Jun  3 23:03 queuedata.json
[2025-06-04 13:39:46] -rwx------. 1 boinc boinc     37140 Jun  3 23:04 runpilot2-wrapper.sh
[2025-06-04 13:39:46] -rw-r--r--. 1 boinc boinc       100 Jun  4 12:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:39:46] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 12:31 run_atlas
[2025-06-04 13:39:46] -rw-r--r--. 1 boinc boinc       105 Jun  4 12:31 job.xml
[2025-06-04 13:39:46] -rw-r--r--. 2 boinc boinc     15093 Jun  4 12:31 start_atlas.sh
[2025-06-04 13:39:46] drwxrwx--x. 2 boinc boinc        68 Jun  4 12:31 shared
[2025-06-04 13:39:46] -rw-r--r--. 2 boinc boinc    508885 Jun  4 12:31 input.tar.gz
[2025-06-04 13:39:46] -rw-r--r--. 1 boinc boinc      6076 Jun  4 12:31 init_data.xml
[2025-06-04 13:39:46] -rw-r--r--. 2 boinc boinc 216133365 Jun  4 12:31 EVNT.45006593._001833.pool.root.1
[2025-06-04 13:39:46] -rw-r--r--. 1 boinc boinc         0 Jun  4 12:31 boinc_lockfile
[2025-06-04 13:39:46] -rw-r--r--. 1 boinc boinc      2525 Jun  4 12:31 pandaJob.out
[2025-06-04 13:39:46] -rw-------. 1 boinc boinc    986812 Jun  4 12:31 agis_schedconf.cvmfs.json
[2025-06-04 13:39:46] -rw-------. 1 boinc boinc   1603667 Jun  4 12:31 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:39:46] drwx------. 4 boinc boinc      4096 Jun  4 12:31 pilot3
[2025-06-04 13:39:46] -rw-------. 1 boinc boinc        95 Jun  4 13:38 pilot_heartbeat.json
[2025-06-04 13:39:46] -rw-------. 1 boinc boinc 179337150 Jun  4 13:38 HITS.45006595._045705.pool.root.1
[2025-06-04 13:39:46] -rw-r--r--. 1 boinc boinc       529 Jun  4 13:39 boinc_task_state.xml
[2025-06-04 13:39:46] -rw-------. 1 boinc boinc      1034 Jun  4 13:39 memory_monitor_summary.json
[2025-06-04 13:39:46] -rw-------. 1 boinc boinc    305838 Jun  4 13:39 log.45006595._045705.job.log.tgz.1
[2025-06-04 13:39:46] -rw-------. 1 boinc boinc      7730 Jun  4 13:39 heartbeat.json
[2025-06-04 13:39:46] -rw-r--r--. 1 boinc boinc      8192 Jun  4 13:39 boinc_mmap_file
[2025-06-04 13:39:46] -rw-r--r--. 1 boinc boinc        27 Jun  4 13:39 wrapper_checkpoint.txt
[2025-06-04 13:39:46] -rw-------. 1 boinc boinc      4610 Jun  4 13:39 pilotlog.txt
[2025-06-04 13:39:46] -rw-------. 1 boinc boinc    394348 Jun  4 13:39 log.45006595._045705.job.log.1
[2025-06-04 13:39:46] -rw-------. 1 boinc boinc       357 Jun  4 13:39 output.list
[2025-06-04 13:39:46] -rw-r--r--. 1 boinc boinc       620 Jun  4 13:39 runtime_log
[2025-06-04 13:39:46] -rw-------. 1 boinc boinc    716800 Jun  4 13:39 result.tar.gz
[2025-06-04 13:39:46] -rw-------. 1 boinc boinc       663 Jun  4 13:39 Ss1MDm2yng7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9CmKDms0gXOm.diag
[2025-06-04 13:39:46] -rw-r--r--. 1 boinc boinc      8662 Jun  4 13:39 runtime_log.err
[2025-06-04 13:39:46] -rw-r--r--. 1 boinc boinc     22624 Jun  4 13:39 stderr.txt
[2025-06-04 13:39:46] HITS file was successfully produced:
[2025-06-04 13:39:46] -rw-------. 1 boinc boinc 179337150 Jun  4 13:38 shared/HITS.pool.root.1
[2025-06-04 13:39:46]  *** Contents of shared directory: ***
[2025-06-04 13:39:46] total 387420
[2025-06-04 13:39:46] -rw-r--r--. 2 boinc boinc     15093 Jun  4 12:31 start_atlas.sh
[2025-06-04 13:39:46] -rw-r--r--. 2 boinc boinc    508885 Jun  4 12:31 input.tar.gz
[2025-06-04 13:39:46] -rw-r--r--. 2 boinc boinc 216133365 Jun  4 12:31 ATLAS.root_0
[2025-06-04 13:39:46] -rw-------. 1 boinc boinc 179337150 Jun  4 13:38 HITS.pool.root.1
[2025-06-04 13:39:46] -rw-------. 1 boinc boinc    716800 Jun  4 13:39 result.tar.gz
13:39:47 (2283337): run_atlas exited; CPU time 28210.771768
13:39:47 (2283337): called boinc_finish(0)

</stderr_txt>
]]>

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