Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:10:08 (3670358): wrapper (7.7.26015): starting
22:10:08 (3670358): wrapper: running run_atlas (--nthreads 3)
[2025-06-05 22:10:08] Arguments: --nthreads 3
[2025-06-05 22:10:08] Threads: 3
[2025-06-05 22:10:08] Checking for CVMFS
[2025-06-05 22:10:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 22:11:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 22:11:10] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 22:11:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 22:11:10] 2.11.5.0 3670578 1 30952 146819 3 1 24830340 31457280 0 130560 0 0 0.000 1292 51 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-06-05 22:11:10] CVMFS is ok
[2025-06-05 22:11:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 22:11:10] Checking for apptainer binary...
[2025-06-05 22:11:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-05 22:11:10] Running /usr/bin/apptainer --version
[2025-06-05 22:11:10] apptainer version 1.3.4-1.el9
[2025-06-05 22:11:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 22:11:10] testio001
[2025-06-05 22:11:10] apptainer works
[2025-06-05 22:11:11] Set ATHENA_PROC_NUMBER=3
[2025-06-05 22:11:11] Set ATHENA_CORE_NUMBER=3
[2025-06-05 22:11:11] Starting ATLAS job with PandaID=6677976696
[2025-06-05 22:11:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 00:08:31]  *** The last 200 lines of the pilot log: ***
[2025-06-06 00:08:31] 2025-06-05 15:08:12,681 | INFO     | mean y: 2378232.4414414414
[2025-06-06 00:08:31] 2025-06-05 15:08:12,681 | INFO     | -- intersect: -67751016939.90226
[2025-06-06 00:08:31] 2025-06-05 15:08:12,681 | INFO     | intersect: -67751016939.90226
[2025-06-06 00:08:31] 2025-06-05 15:08:12,681 | INFO     | chi2: 3.832167872379706
[2025-06-06 00:08:31] 2025-06-05 15:08:12,681 | INFO     | sum of square deviations: 369284828.4150944
[2025-06-06 00:08:31] 2025-06-05 15:08:12,682 | INFO     | sum of deviations: 16804372303.735859
[2025-06-06 00:08:31] 2025-06-05 15:08:12,682 | INFO     | mean x: 1749132470.528302
[2025-06-06 00:08:31] 2025-06-05 15:08:12,682 | INFO     | mean y: 2379288.754716981
[2025-06-06 00:08:31] 2025-06-05 15:08:12,682 | INFO     | -- intersect: -79592207278.6404
[2025-06-06 00:08:31] 2025-06-05 15:08:12,682 | INFO     | intersect: -79592207278.6404
[2025-06-06 00:08:31] 2025-06-05 15:08:12,682 | INFO     | chi2: 3.835246877854232
[2025-06-06 00:08:31] 2025-06-05 15:08:12,682 | INFO     | current chi2=3.835246877854232 (change=-0.08034630989728052 %)
[2025-06-06 00:08:31] 2025-06-05 15:08:12,682 | INFO     | right removable region: 105
[2025-06-06 00:08:31] 2025-06-05 15:08:12,682 | INFO     | sum of square deviations: 369282998.4150944
[2025-06-06 00:08:31] 2025-06-05 15:08:12,682 | INFO     | sum of deviations: -7555541530.962268
[2025-06-06 00:08:31] 2025-06-05 15:08:12,682 | INFO     | mean x: 1749132775.528302
[2025-06-06 00:08:31] 2025-06-05 15:08:12,682 | INFO     | mean y: 2444624.820754717
[2025-06-06 00:08:31] 2025-06-05 15:08:12,682 | INFO     | -- intersect: 35789755130.289185
[2025-06-06 00:08:31] 2025-06-05 15:08:12,682 | INFO     | intersect: 35789755130.289185
[2025-06-06 00:08:31] 2025-06-05 15:08:12,682 | INFO     | chi2: 1.4256168865362906
[2025-06-06 00:08:31] 2025-06-05 15:08:12,683 | INFO     | current chi2=1.4256168865362906 (change=62.79868382563812 %)
[2025-06-06 00:08:31] 2025-06-05 15:08:12,683 | INFO     | sum of square deviations: 319448590.9108916
[2025-06-06 00:08:31] 2025-06-05 15:08:12,683 | INFO     | sum of deviations: -24442473777.39603
[2025-06-06 00:08:31] 2025-06-05 15:08:12,683 | INFO     | mean x: 1749132928.029703
[2025-06-06 00:08:31] 2025-06-05 15:08:12,683 | INFO     | mean y: 2496319.4653465347
[2025-06-06 00:08:31] 2025-06-05 15:08:12,683 | INFO     | -- intersect: 133836662263.46759
[2025-06-06 00:08:31] 2025-06-05 15:08:12,683 | INFO     | intersect: 133836662263.46759
[2025-06-06 00:08:31] 2025-06-05 15:08:12,683 | INFO     | chi2: 0.21854009771204666
[2025-06-06 00:08:31] 2025-06-05 15:08:12,683 | INFO     | current chi2=0.21854009771204666 (change=84.67048898087785 %)
[2025-06-06 00:08:31] 2025-06-05 15:08:12,683 | INFO     | sum of square deviations: 274311945.90625
[2025-06-06 00:08:31] 2025-06-05 15:08:12,683 | INFO     | sum of deviations: -23915280084.906254
[2025-06-06 00:08:31] 2025-06-05 15:08:12,684 | INFO     | mean x: 1749133080.53125
[2025-06-06 00:08:31] 2025-06-05 15:08:12,684 | INFO     | mean y: 2494285.1354166665
[2025-06-06 00:08:31] 2025-06-05 15:08:12,684 | INFO     | -- intersect: 152496791930.40115
[2025-06-06 00:08:31] 2025-06-05 15:08:12,684 | INFO     | intersect: 152496791930.40115
[2025-06-06 00:08:31] 2025-06-05 15:08:12,684 | INFO     | chi2: 0.15832009553730228
[2025-06-06 00:08:31] 2025-06-05 15:08:12,684 | INFO     | current chi2=0.15832009553730228 (change=27.555584904190724 %)
[2025-06-06 00:08:31] 2025-06-05 15:08:12,684 | INFO     | sum of square deviations: 233640500.90109906
[2025-06-06 00:08:31] 2025-06-05 15:08:12,684 | INFO     | sum of deviations: -21068746955.52748
[2025-06-06 00:08:31] 2025-06-05 15:08:12,684 | INFO     | mean x: 1749133233.032967
[2025-06-06 00:08:31] 2025-06-05 15:08:12,684 | INFO     | mean y: 2483589.175824176
[2025-06-06 00:08:31] 2025-06-05 15:08:12,684 | INFO     | -- intersect: 157732180864.02835
[2025-06-06 00:08:31] 2025-06-05 15:08:12,684 | INFO     | intersect: 157732180864.02835
[2025-06-06 00:08:31] 2025-06-05 15:08:12,684 | INFO     | chi2: 0.15666547197229688
[2025-06-06 00:08:31] 2025-06-05 15:08:12,684 | INFO     | current chi2=0.15666547197229688 (change=1.0451127883608096 %)
[2025-06-06 00:08:31] 2025-06-05 15:08:12,684 | INFO     | left removable region: 40
[2025-06-06 00:08:31] 2025-06-05 15:08:12,684 | INFO     | sum of square deviations: 85132828.8615385
[2025-06-06 00:08:31] 2025-06-05 15:08:12,685 | INFO     | sum of deviations: -7671875029.461537
[2025-06-06 00:08:31] 2025-06-05 15:08:12,685 | INFO     | mean x: 1749133660.0461538
[2025-06-06 00:08:31] 2025-06-05 15:08:12,685 | INFO     | mean y: 2425573.153846154
[2025-06-06 00:08:31] 2025-06-05 15:08:12,685 | INFO     | -- intersect: 157628279537.47897
[2025-06-06 00:08:31] 2025-06-05 15:08:12,685 | INFO     | intersect: 157628279537.47897
[2025-06-06 00:08:31] 2025-06-05 15:08:12,685 | INFO     | chi2: 0.13472548898520273
[2025-06-06 00:08:31] 2025-06-05 15:08:12,685 | INFO     | -- intersect: 157628279537.47897
[2025-06-06 00:08:31] 2025-06-05 15:08:12,685 | INFO     | current memory leak: -90.12 B/s (using 65 data points, chi2=0.13)
[2025-06-06 00:08:31] 2025-06-05 15:08:12,685 | INFO     | ..............................
[2025-06-06 00:08:31] 2025-06-05 15:08:12,685 | INFO     | . Timing measurements:
[2025-06-06 00:08:31] 2025-06-05 15:08:12,685 | INFO     | . get job = 0 s
[2025-06-06 00:08:31] 2025-06-05 15:08:12,685 | INFO     | . initial setup = 7 s
[2025-06-06 00:08:31] 2025-06-05 15:08:12,685 | INFO     | . payload setup = 3 s
[2025-06-06 00:08:31] 2025-06-05 15:08:12,685 | INFO     | . stage-in = 0 s
[2025-06-06 00:08:31] 2025-06-05 15:08:12,685 | INFO     | . payload execution = 6750 s
[2025-06-06 00:08:31] 2025-06-05 15:08:12,686 | INFO     | . stage-out = 0 s
[2025-06-06 00:08:31] 2025-06-05 15:08:12,686 | INFO     | . log creation = 0 s
[2025-06-06 00:08:31] 2025-06-05 15:08:12,686 | INFO     | ..............................
[2025-06-06 00:08:31] 2025-06-05 15:08:12,959 | INFO     | 
[2025-06-06 00:08:31] 2025-06-05 15:08:12,959 | INFO     | job summary report
[2025-06-06 00:08:31] 2025-06-05 15:08:12,959 | INFO     | --------------------------------------------------
[2025-06-06 00:08:31] 2025-06-05 15:08:12,959 | INFO     | PanDA job id: 6677976696
[2025-06-06 00:08:31] 2025-06-05 15:08:12,959 | INFO     | task id: 45006595
[2025-06-06 00:08:31] 2025-06-05 15:08:12,959 | INFO     | errors: (none)
[2025-06-06 00:08:31] 2025-06-05 15:08:12,959 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 00:08:31] 2025-06-05 15:08:12,959 | INFO     | pilot state: finished 
[2025-06-06 00:08:31] 2025-06-05 15:08:12,959 | INFO     | transexitcode: 0
[2025-06-06 00:08:31] 2025-06-05 15:08:12,959 | INFO     | exeerrorcode: 0
[2025-06-06 00:08:31] 2025-06-05 15:08:12,959 | INFO     | exeerrordiag: 
[2025-06-06 00:08:31] 2025-06-05 15:08:12,959 | INFO     | exitcode: 0
[2025-06-06 00:08:31] 2025-06-05 15:08:12,959 | INFO     | exitmsg: OK
[2025-06-06 00:08:31] 2025-06-05 15:08:12,959 | INFO     | cpuconsumptiontime: 16948 s
[2025-06-06 00:08:31] 2025-06-05 15:08:12,960 | INFO     | nevents: 400
[2025-06-06 00:08:31] 2025-06-05 15:08:12,960 | INFO     | neventsw: 0
[2025-06-06 00:08:31] 2025-06-05 15:08:12,960 | INFO     | pid: 3680904
[2025-06-06 00:08:31] 2025-06-05 15:08:12,960 | INFO     | pgrp: 3680904
[2025-06-06 00:08:31] 2025-06-05 15:08:12,960 | INFO     | corecount: 3
[2025-06-06 00:08:31] 2025-06-05 15:08:12,960 | INFO     | event service: False
[2025-06-06 00:08:31] 2025-06-05 15:08:12,960 | INFO     | sizes: {0: 2397336, 3: 2397542, 11: 2397570, 6758: 2433526, 6759: 2433526, 6832: 2433696}
[2025-06-06 00:08:31] 2025-06-05 15:08:12,960 | INFO     | --------------------------------------------------
[2025-06-06 00:08:31] 2025-06-05 15:08:12,960 | INFO     | 
[2025-06-06 00:08:31] 2025-06-05 15:08:12,960 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-06-06 00:08:31] 2025-06-05 15:08:12,970 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 00:08:31] 2025-06-05 15:08:12,970 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 00:08:31] 2025-06-05 15:08:12,970 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 00:08:31] 2025-06-05 15:08:12,970 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 00:08:31] 2025-06-05 15:08:12,970 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 00:08:31] 2025-06-05 15:08:12,970 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 00:08:31] 2025-06-05 15:08:12,970 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 00:08:31] 2025-06-05 15:08:12,970 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 00:08:31] 2025-06-05 15:08:12,970 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 00:08:31] 2025-06-05 15:08:12,970 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 00:08:31] 2025-06-05 15:08:12,971 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 00:08:31] 2025-06-05 15:08:12,971 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 00:08:31] 2025-06-05 15:08:12,971 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 00:08:31] 2025-06-05 15:08:12,971 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 00:08:31] 2025-06-05 15:08:12,971 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 00:08:31] 2025-06-05 15:08:12,971 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 00:08:31] 2025-06-05 15:08:12,971 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 00:08:31] 2025-06-05 15:08:12,971 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 00:08:31] 2025-06-05 15:08:12,971 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 00:08:31] 2025-06-05 15:08:12,971 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 00:08:31] 2025-06-05 15:08:12,971 | INFO     | job 6677976696 has completed (purged errors)
[2025-06-06 00:08:31] 2025-06-05 15:08:12,971 | INFO     | overall cleanup function is called
[2025-06-06 00:08:31] 2025-06-05 15:08:13,913 | INFO     | PID=3674548 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-06 00:08:31] 2025-06-05 15:08:13,977 | INFO     | --- collectZombieJob: --- 10, [3680904]
[2025-06-06 00:08:31] 2025-06-05 15:08:13,977 | INFO     | zombie collector waiting for pid 3680904
[2025-06-06 00:08:31] 2025-06-05 15:08:13,977 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 00:08:31] 2025-06-05 15:08:13,977 | INFO     | collected zombie processes
[2025-06-06 00:08:31] 2025-06-05 15:08:13,977 | INFO     | will attempt to kill all subprocesses of pid=3680904
[2025-06-06 00:08:31] 2025-06-05 15:08:14,009 | INFO     | process IDs to be killed: [3680904] (in reverse order)
[2025-06-06 00:08:31] 2025-06-05 15:08:14,027 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 00:08:31] 2025-06-05 15:08:14,028 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 00:08:31] 2025-06-05 15:08:14,029 | INFO     | did not find any defunct processes belonging to 3680904
[2025-06-06 00:08:31] 2025-06-05 15:08:14,029 | INFO     | did not find any defunct processes belonging to 3680904
[2025-06-06 00:08:31] 2025-06-05 15:08:14,030 | INFO     | ready for new job
[2025-06-06 00:08:31] 2025-06-05 15:08:14,030 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 00:08:31] 2025-06-05 15:08:14,031 | INFO     | **************************************
[2025-06-06 00:08:31] 2025-06-05 15:08:14,031 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 00:08:31] 2025-06-05 15:08:14,031 | INFO     | **************************************
[2025-06-06 00:08:31] 2025-06-05 15:08:14,031 | INFO     | 
[2025-06-06 00:08:31] 2025-06-05 15:08:14,042 | INFO     | architecture information:
[2025-06-06 00:08:31] 2025-06-05 15:08:14,042 | INFO     | executing command: cat /etc/os-release
[2025-06-06 00:08:31] 2025-06-05 15:08:14,050 | INFO     | cat /etc/os-release:
[2025-06-06 00:08:31] NAME="CentOS Linux"
[2025-06-06 00:08:31] VERSION="7 (Core)"
[2025-06-06 00:08:31] ID="centos"
[2025-06-06 00:08:31] ID_LIKE="rhel fedora"
[2025-06-06 00:08:31] VERSION_ID="7"
[2025-06-06 00:08:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 00:08:31] ANSI_COLOR="0;31"
[2025-06-06 00:08:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 00:08:31] HOME_URL="https://www.centos.org/"
[2025-06-06 00:08:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 00:08:31] 
[2025-06-06 00:08:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 00:08:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 00:08:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 00:08:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 00:08:31] 
[2025-06-06 00:08:31] 2025-06-05 15:08:14,050 | INFO     | **************************************
[2025-06-06 00:08:31] 2025-06-05 15:08:14,552 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-06-06 00:08:31] 2025-06-05 15:08:14,561 | INFO     | sufficient remaining disk space (126944804864 B)
[2025-06-06 00:08:31] 2025-06-05 15:08:14,561 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 00:08:31] 2025-06-05 15:08:14,562 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 00:08:31] 2025-06-05 15:08:14,562 | INFO     | update_server=False
[2025-06-06 00:08:31] 2025-06-05 15:08:14,562 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 00:08:31] 2025-06-05 15:08:14,562 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 00:08:31] 2025-06-05 15:08:14,562 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 00:08:31] 2025-06-05 15:08:14,562 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 00:08:31] 2025-06-05 15:08:14,562 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 00:08:31] 2025-06-05 15:08:14,562 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 00:08:31] 2025-06-05 15:08:14,562 | INFO     | aborting loop
[2025-06-06 00:08:31] 2025-06-05 15:08:14,563 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 00:08:31] 2025-06-05 15:08:14,563 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 00:08:31] 2025-06-05 15:08:14,593 | INFO     | all data control threads have been joined
[2025-06-06 00:08:31] 2025-06-05 15:08:14,831 | INFO     | all payload control threads have been joined
[2025-06-06 00:08:31] 2025-06-05 15:08:15,367 | INFO     | all job control threads have been joined
[2025-06-06 00:08:31] 2025-06-05 15:08:15,566 | INFO     | [job] retrieve thread has finished
[2025-06-06 00:08:31] 2025-06-05 15:08:15,567 | INFO     | [job] queue monitor thread has finished
[2025-06-06 00:08:31] 2025-06-05 15:08:15,567 | INFO     | [job] job monitor thread has finished
[2025-06-06 00:08:31] 2025-06-05 15:08:15,572 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 00:08:31] 2025-06-05 15:08:15,598 | INFO     | [data] control thread has finished
[2025-06-06 00:08:31] 2025-06-05 15:08:15,836 | INFO     | [payload] control thread has finished
[2025-06-06 00:08:31] 2025-06-05 15:08:15,849 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 00:08:31] 2025-06-05 15:08:15,982 | INFO     | [data] copytool_in thread has finished
[2025-06-06 00:08:31] 2025-06-05 15:08:16,206 | INFO     | [payload] validate_post thread has finished
[2025-06-06 00:08:31] 2025-06-05 15:08:16,231 | INFO     | [job] validate thread has finished
[2025-06-06 00:08:31] 2025-06-05 15:08:16,372 | INFO     | [job] control thread has finished
[2025-06-06 00:08:31] 2025-06-05 15:08:16,567 | INFO     | [data] copytool_out thread has finished
[2025-06-06 00:08:31] 2025-06-05 15:08:16,606 | INFO     | [payload] failed_post thread has finished
[2025-06-06 00:08:31] 2025-06-05 15:08:16,800 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 00:08:31] 2025-06-05 15:08:17,829 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 00:08:31] 2025-06-05 15:08:21,834 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 00:08:31] 2025-06-05 15:08:24,770 | INFO     | job.realtimelogging is not enabled
[2025-06-06 00:08:31] 2025-06-05 15:08:25,775 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 00:08:31] 2025-06-05 15:08:26,324 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140435186280256)>', '<ExcThread(monitor, started 140434424723200)>']
[2025-06-06 00:08:31] 2025-06-05 15:08:26,622 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 00:08:31] 2025-06-05 15:08:26,622 | INFO     | [monitor] control thread has ended
[2025-06-06 00:08:31] 2025-06-05 15:08:31,349 | INFO     | all workflow threads have been joined
[2025-06-06 00:08:31] 2025-06-05 15:08:31,349 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 00:08:31] 2025-06-05 15:08:31,349 | INFO     | traces error code: 0
[2025-06-06 00:08:31] 2025-06-05 15:08:31,349 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 00:08:31] 2025-06-05 15:08:31,411 [wrapper] ==== pilot stdout END ====
[2025-06-06 00:08:31] 2025-06-05 15:08:31,413 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 00:08:31] 2025-06-05 15:08:31,414 [wrapper] pilotpid: 3674548
[2025-06-06 00:08:31] 2025-06-05 15:08:31,415 [wrapper] Pilot exit status: 0
[2025-06-06 00:08:31] 2025-06-05 15:08:31,422 [wrapper] pandaids: 6677976696
[2025-06-06 00:08:31] 2025-06-05 15:08:31,433 [wrapper] cleanup supervisor_pilot 3694616 3674549
[2025-06-06 00:08:31] 2025-06-05 15:08:31,435 [wrapper] Test setup, not cleaning
[2025-06-06 00:08:31] 2025-06-05 15:08:31,436 [wrapper] apfmon messages muted
[2025-06-06 00:08:31] 2025-06-05 15:08:31,438 [wrapper] ==== wrapper stdout END ====
[2025-06-06 00:08:31] 2025-06-05 15:08:31,439 [wrapper] ==== wrapper stderr END ====
[2025-06-06 00:08:31]  *** Error codes and diagnostics ***
[2025-06-06 00:08:31]     "exeErrorCode": 0,
[2025-06-06 00:08:31]     "exeErrorDiag": "",
[2025-06-06 00:08:31]     "pilotErrorCode": 0,
[2025-06-06 00:08:31]     "pilotErrorDiag": "",
[2025-06-06 00:08:31]  *** Listing of results directory ***
[2025-06-06 00:08:31] total 390048
[2025-06-06 00:08:31] -rw-r--r--. 1 boinc boinc    495897 Jun  4 03:57 pilot3.tar.gz
[2025-06-06 00:08:31] -rwx------. 1 boinc boinc     37140 Jun  4 04:08 runpilot2-wrapper.sh
[2025-06-06 00:08:31] -rw-r--r--. 1 boinc boinc      5111 Jun  4 04:08 queuedata.json
[2025-06-06 00:08:31] -rw-r--r--. 1 boinc boinc       100 Jun  5 22:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 00:08:31] -rwxr-xr-x. 1 boinc boinc      7986 Jun  5 22:10 run_atlas
[2025-06-06 00:08:31] -rw-r--r--. 1 boinc boinc       105 Jun  5 22:10 job.xml
[2025-06-06 00:08:31] -rw-r--r--. 1 boinc boinc      9292 Jun  5 22:10 init_data.xml
[2025-06-06 00:08:31] -rw-r--r--. 2 boinc boinc 215958859 Jun  5 22:10 EVNT.45006593._001741.pool.root.1
[2025-06-06 00:08:31] -rw-r--r--. 2 boinc boinc     15093 Jun  5 22:10 start_atlas.sh
[2025-06-06 00:08:31] drwxrwx--x. 2 boinc boinc        68 Jun  5 22:10 shared
[2025-06-06 00:08:31] -rw-r--r--. 2 boinc boinc    508880 Jun  5 22:10 input.tar.gz
[2025-06-06 00:08:31] -rw-r--r--. 1 boinc boinc         0 Jun  5 22:10 boinc_lockfile
[2025-06-06 00:08:31] -rw-r--r--. 1 boinc boinc      2522 Jun  5 22:11 pandaJob.out
[2025-06-06 00:08:31] -rw-------. 1 boinc boinc    983210 Jun  5 22:14 agis_schedconf.cvmfs.json
[2025-06-06 00:08:31] -rw-------. 1 boinc boinc   1598969 Jun  5 22:14 agis_ddmendpoints.agis.ALL.json
[2025-06-06 00:08:31] drwx------. 4 boinc boinc      4096 Jun  5 22:14 pilot3
[2025-06-06 00:08:31] -rw-------. 1 boinc boinc 177908833 Jun  6 00:06 HITS.45006595._043422.pool.root.1
[2025-06-06 00:08:31] -rw-------. 1 boinc boinc      1014 Jun  6 00:06 memory_monitor_summary.json
[2025-06-06 00:08:31] -rw-------. 1 boinc boinc    229705 Jun  6 00:06 log.45006595._043422.job.log.tgz.1
[2025-06-06 00:08:31] -rw-r--r--. 1 boinc boinc       529 Jun  6 00:07 boinc_task_state.xml
[2025-06-06 00:08:31] -rw-------. 1 boinc boinc        95 Jun  6 00:07 pilot_heartbeat.json
[2025-06-06 00:08:31] -rw-------. 1 boinc boinc      7663 Jun  6 00:08 heartbeat.json
[2025-06-06 00:08:31] -rw-r--r--. 1 boinc boinc      8192 Jun  6 00:08 boinc_mmap_file
[2025-06-06 00:08:31] -rw-r--r--. 1 boinc boinc        27 Jun  6 00:08 wrapper_checkpoint.txt
[2025-06-06 00:08:31] -rw-------. 1 boinc boinc      4549 Jun  6 00:08 pilotlog.txt
[2025-06-06 00:08:31] -rw-------. 1 boinc boinc    627855 Jun  6 00:08 log.45006595._043422.job.log.1
[2025-06-06 00:08:31] -rw-------. 1 boinc boinc       357 Jun  6 00:08 output.list
[2025-06-06 00:08:31] -rw-r--r--. 1 boinc boinc       620 Jun  6 00:08 runtime_log
[2025-06-06 00:08:31] -rw-------. 1 boinc boinc    880640 Jun  6 00:08 result.tar.gz
[2025-06-06 00:08:31] -rw-r--r--. 1 boinc boinc      8617 Jun  6 00:08 runtime_log.err
[2025-06-06 00:08:31] -rw-------. 1 boinc boinc       643 Jun  6 00:08 co0KDmVBmg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm9fZKDmF9cQSo.diag
[2025-06-06 00:08:31] -rw-r--r--. 1 boinc boinc     20616 Jun  6 00:08 stderr.txt
[2025-06-06 00:08:31] HITS file was successfully produced:
[2025-06-06 00:08:31] -rw-------. 1 boinc boinc 177908833 Jun  6 00:06 shared/HITS.pool.root.1
[2025-06-06 00:08:31]  *** Contents of shared directory: ***
[2025-06-06 00:08:31] total 386016
[2025-06-06 00:08:31] -rw-r--r--. 2 boinc boinc 215958859 Jun  5 22:10 ATLAS.root_0
[2025-06-06 00:08:31] -rw-r--r--. 2 boinc boinc     15093 Jun  5 22:10 start_atlas.sh
[2025-06-06 00:08:31] -rw-r--r--. 2 boinc boinc    508880 Jun  5 22:10 input.tar.gz
[2025-06-06 00:08:31] -rw-------. 1 boinc boinc 177908833 Jun  6 00:06 HITS.pool.root.1
[2025-06-06 00:08:31] -rw-------. 1 boinc boinc    880640 Jun  6 00:08 result.tar.gz
00:08:32 (3670358): run_atlas exited; CPU time 16975.721533
00:08:32 (3670358): called boinc_finish(0)

</stderr_txt>
]]>

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