Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
10:13:30 (1777270): wrapper (7.7.26015): starting
10:13:30 (1777270): wrapper: running run_atlas (--nthreads 12)
[2025-06-05 10:13:30] Arguments: --nthreads 12
[2025-06-05 10:13:30] Threads: 12
[2025-06-05 10:13:30] Checking for CVMFS
[2025-06-05 10:13:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-05 10:13:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-05 10:13:30] Running cvmfs_config stat atlas.cern.ch
[2025-06-05 10:13:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-05 10:13:31] 2.13.0.0 233097 3587 47236 146811 1 55 3428755 4096001 0 130560 12 3176322 99.991 863714 207 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-05 10:13:31] CVMFS is ok
[2025-06-05 10:13:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 10:13:31] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-05 10:13:31] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-05 10:13:31] Further information can be found at the LHC@home message board.
[2025-06-05 10:13:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 10:13:31] Checking for apptainer binary...
[2025-06-05 10:13:31] apptainer is not installed, using version from CVMFS
[2025-06-05 10:13:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 10:13:31] ws24
[2025-06-05 10:13:31] apptainer works
[2025-06-05 10:13:31] Set ATHENA_PROC_NUMBER=12
[2025-06-05 10:13:31] Set ATHENA_CORE_NUMBER=12
[2025-06-05 10:13:31] Starting ATLAS job with PandaID=6678072368
[2025-06-05 10:13:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 11:26:47]  *** The last 200 lines of the pilot log: ***
[2025-06-05 11:26:47]  storage_token=
[2025-06-05 11:26:47]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6678072368/log.45006595._045687.job.log.tgz.1
[2025-06-05 11:26:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/95/d5/log.45006595._045687.job.log.tgz.1
[2025-06-05 11:26:47]  workdir=None
[2025-06-05 11:26:47] ]
[2025-06-05 11:26:47] 2025-06-05 09:26:09,903 | INFO     | transferring file log.45006595._045687.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6678072368/log.45006595._045687.job.log.tgz.1 to /var/lib/boinc
[2025-06-05 11:26:47] 2025-06-05 09:26:09,903 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6678072368/log.45006595._045687.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.450065
[2025-06-05 11:26:47] 2025-06-05 09:26:09,918 | INFO     | adding to output.list: log.45006595._045687.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/95/d5/log.45006595._045687.job.log.tg
[2025-06-05 11:26:47] 2025-06-05 09:26:09,918 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-05 11:26:47] 2025-06-05 09:26:09,919 | INFO     | summary of transferred files:
[2025-06-05 11:26:47] 2025-06-05 09:26:09,919 | INFO     |  -- lfn=log.45006595._045687.job.log.tgz.1, status_code=0, status=transferred
[2025-06-05 11:26:47] 2025-06-05 09:26:09,919 | INFO     | stage-out finished correctly
[2025-06-05 11:26:47] 2025-06-05 09:26:09,992 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-05 11:26:47] 2025-06-05 09:26:10,616 | INFO     | job 6678072368 has state=finished
[2025-06-05 11:26:47] 2025-06-05 09:26:10,616 | INFO     | preparing for final server update for job 6678072368 in state='finished'
[2025-06-05 11:26:47] 2025-06-05 09:26:10,617 | INFO     | this job has now completed (state=finished)
[2025-06-05 11:26:47] 2025-06-05 09:26:10,617 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-05 11:26:47] 2025-06-05 09:26:10,617 | INFO     | log transfer has been attempted: DONE
[2025-06-05 11:26:47] 2025-06-05 09:26:10,617 | INFO     | job 6678072368 has finished - writing final server update
[2025-06-05 11:26:47] 2025-06-05 09:26:10,617 | INFO     | total number of processed events: 400 (read)
[2025-06-05 11:26:47] 2025-06-05 09:26:10,622 | INFO     | executing command: lscpu
[2025-06-05 11:26:47] 2025-06-05 09:26:10,652 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 11:26:47] 2025-06-05 09:26:11,870 | INFO     | monitor loop #320: job 0:6678072368 is in state 'finished'
[2025-06-05 11:26:47] 2025-06-05 09:26:11,871 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:26:47] 2025-06-05 09:26:14,374 | INFO     | monitor loop #321: job 0:6678072368 is in state 'finished'
[2025-06-05 11:26:47] 2025-06-05 09:26:14,374 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:26:47] 2025-06-05 09:26:16,262 | INFO     | PID=1780949 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 11:26:47] 2025-06-05 09:26:16,877 | INFO     | monitor loop #322: job 0:6678072368 is in state 'finished'
[2025-06-05 11:26:47] 2025-06-05 09:26:16,877 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:26:47] 2025-06-05 09:26:19,380 | INFO     | monitor loop #323: job 0:6678072368 is in state 'finished'
[2025-06-05 11:26:47] 2025-06-05 09:26:19,380 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:26:47] 2025-06-05 09:26:21,887 | INFO     | monitor loop #324: job 0:6678072368 is in state 'finished'
[2025-06-05 11:26:47] 2025-06-05 09:26:21,887 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:26:47] 2025-06-05 09:26:24,390 | INFO     | monitor loop #325: job 0:6678072368 is in state 'finished'
[2025-06-05 11:26:47] 2025-06-05 09:26:24,391 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:26:47] 2025-06-05 09:26:26,893 | INFO     | monitor loop #326: job 0:6678072368 is in state 'finished'
[2025-06-05 11:26:47] 2025-06-05 09:26:26,893 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 11:26:47] 2025-06-05 09:26:27,048 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 11:26:47] 2025-06-05 09:26:27,049 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6678072368/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 11:26:47] 2025-06-05 09:26:27,049 | INFO     | extracted standard info from prmon json
[2025-06-05 11:26:47] 2025-06-05 09:26:27,049 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 11:26:47] 2025-06-05 09:26:27,049 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 11:26:47] 2025-06-05 09:26:27,050 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 11:26:47] 2025-06-05 09:26:27,050 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 11:26:47] 2025-06-05 09:26:27,051 | INFO     | fitting pss+swap vs Time
[2025-06-05 11:26:47] 2025-06-05 09:26:27,051 | INFO     | sum of square deviations: 81266640.0
[2025-06-05 11:26:47] 2025-06-05 09:26:27,052 | INFO     | sum of deviations: -3637780475.5
[2025-06-05 11:26:47] 2025-06-05 09:26:27,052 | INFO     | mean x: 1749113478.5
[2025-06-05 11:26:47] 2025-06-05 09:26:27,052 | INFO     | mean y: 2965469.859375
[2025-06-05 11:26:47] 2025-06-05 09:26:27,052 | INFO     | -- intersect: 78299433264.2851
[2025-06-05 11:26:47] 2025-06-05 09:26:27,052 | INFO     | intersect: 78299433264.2851
[2025-06-05 11:26:47] 2025-06-05 09:26:27,052 | INFO     | chi2: 0.16041541721138852
[2025-06-05 11:26:47] 2025-06-05 09:26:27,052 | INFO     | -- intersect: 78299433264.2851
[2025-06-05 11:26:47] 2025-06-05 09:26:27,052 | INFO     | current memory leak: -44.76 B/s (using 64 data points, chi2=0.16)
[2025-06-05 11:26:47] 2025-06-05 09:26:27,053 | INFO     | ..............................
[2025-06-05 11:26:47] 2025-06-05 09:26:27,053 | INFO     | . Timing measurements:
[2025-06-05 11:26:47] 2025-06-05 09:26:27,053 | INFO     | . get job = 0 s
[2025-06-05 11:26:47] 2025-06-05 09:26:27,053 | INFO     | . initial setup = 5 s
[2025-06-05 11:26:47] 2025-06-05 09:26:27,053 | INFO     | . payload setup = 8 s
[2025-06-05 11:26:47] 2025-06-05 09:26:27,053 | INFO     | . stage-in = 0 s
[2025-06-05 11:26:47] 2025-06-05 09:26:27,053 | INFO     | . payload execution = 4317 s
[2025-06-05 11:26:47] 2025-06-05 09:26:27,053 | INFO     | . stage-out = 0 s
[2025-06-05 11:26:47] 2025-06-05 09:26:27,053 | INFO     | . log creation = 0 s
[2025-06-05 11:26:47] 2025-06-05 09:26:27,053 | INFO     | ..............................
[2025-06-05 11:26:47] 2025-06-05 09:26:27,124 | INFO     | 
[2025-06-05 11:26:47] 2025-06-05 09:26:27,124 | INFO     | job summary report
[2025-06-05 11:26:47] 2025-06-05 09:26:27,124 | INFO     | --------------------------------------------------
[2025-06-05 11:26:47] 2025-06-05 09:26:27,125 | INFO     | PanDA job id: 6678072368
[2025-06-05 11:26:47] 2025-06-05 09:26:27,125 | INFO     | task id: 45006595
[2025-06-05 11:26:47] 2025-06-05 09:26:27,125 | INFO     | errors: (none)
[2025-06-05 11:26:47] 2025-06-05 09:26:27,125 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 11:26:47] 2025-06-05 09:26:27,126 | INFO     | pilot state: finished 
[2025-06-05 11:26:47] 2025-06-05 09:26:27,126 | INFO     | transexitcode: 0
[2025-06-05 11:26:47] 2025-06-05 09:26:27,126 | INFO     | exeerrorcode: 0
[2025-06-05 11:26:47] 2025-06-05 09:26:27,126 | INFO     | exeerrordiag: 
[2025-06-05 11:26:47] 2025-06-05 09:26:27,126 | INFO     | exitcode: 0
[2025-06-05 11:26:47] 2025-06-05 09:26:27,127 | INFO     | exitmsg: OK
[2025-06-05 11:26:47] 2025-06-05 09:26:27,127 | INFO     | cpuconsumptiontime: 38092 s
[2025-06-05 11:26:47] 2025-06-05 09:26:27,127 | INFO     | nevents: 400
[2025-06-05 11:26:47] 2025-06-05 09:26:27,127 | INFO     | neventsw: 0
[2025-06-05 11:26:47] 2025-06-05 09:26:27,127 | INFO     | pid: 1787528
[2025-06-05 11:26:47] 2025-06-05 09:26:27,128 | INFO     | pgrp: 1787528
[2025-06-05 11:26:47] 2025-06-05 09:26:27,128 | INFO     | corecount: 12
[2025-06-05 11:26:47] 2025-06-05 09:26:27,128 | INFO     | event service: False
[2025-06-05 11:26:47] 2025-06-05 09:26:27,128 | INFO     | sizes: {0: 2397347, 4: 2397553, 11: 2397581, 4329: 2423550, 4331: 2432561, 4348: 2432675}
[2025-06-05 11:26:47] 2025-06-05 09:26:27,128 | INFO     | --------------------------------------------------
[2025-06-05 11:26:47] 2025-06-05 09:26:27,128 | INFO     | 
[2025-06-05 11:26:47] 2025-06-05 09:26:27,129 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-05 11:26:47] 2025-06-05 09:26:27,155 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 11:26:47] 2025-06-05 09:26:27,156 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 11:26:47] 2025-06-05 09:26:27,156 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 11:26:47] 2025-06-05 09:26:27,156 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 11:26:47] 2025-06-05 09:26:27,156 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 11:26:47] 2025-06-05 09:26:27,156 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 11:26:47] 2025-06-05 09:26:27,156 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 11:26:47] 2025-06-05 09:26:27,156 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 11:26:47] 2025-06-05 09:26:27,156 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 11:26:47] 2025-06-05 09:26:27,156 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 11:26:47] 2025-06-05 09:26:27,156 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 11:26:47] 2025-06-05 09:26:27,156 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 11:26:47] 2025-06-05 09:26:27,156 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 11:26:47] 2025-06-05 09:26:27,157 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 11:26:47] 2025-06-05 09:26:27,157 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 11:26:47] 2025-06-05 09:26:27,157 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 11:26:47] 2025-06-05 09:26:27,157 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 11:26:47] 2025-06-05 09:26:27,157 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 11:26:47] 2025-06-05 09:26:27,157 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 11:26:47] 2025-06-05 09:26:27,157 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 11:26:47] 2025-06-05 09:26:27,157 | INFO     | job 6678072368 has completed (purged errors)
[2025-06-05 11:26:47] 2025-06-05 09:26:27,157 | INFO     | overall cleanup function is called
[2025-06-05 11:26:47] 2025-06-05 09:26:28,165 | INFO     | --- collectZombieJob: --- 10, [1787528]
[2025-06-05 11:26:47] 2025-06-05 09:26:28,165 | INFO     | zombie collector waiting for pid 1787528
[2025-06-05 11:26:47] 2025-06-05 09:26:28,165 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 11:26:47] 2025-06-05 09:26:28,165 | INFO     | collected zombie processes
[2025-06-05 11:26:47] 2025-06-05 09:26:28,165 | INFO     | will attempt to kill all subprocesses of pid=1787528
[2025-06-05 11:26:47] 2025-06-05 09:26:28,301 | INFO     | process IDs to be killed: [1787528] (in reverse order)
[2025-06-05 11:26:47] 2025-06-05 09:26:28,372 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 11:26:47] 2025-06-05 09:26:28,372 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 11:26:47] 2025-06-05 09:26:28,377 | INFO     | did not find any defunct processes belonging to 1787528
[2025-06-05 11:26:47] 2025-06-05 09:26:28,381 | INFO     | did not find any defunct processes belonging to 1787528
[2025-06-05 11:26:47] 2025-06-05 09:26:28,381 | INFO     | ready for new job
[2025-06-05 11:26:47] 2025-06-05 09:26:28,382 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 11:26:47] 2025-06-05 09:26:28,383 | INFO     | **************************************
[2025-06-05 11:26:47] 2025-06-05 09:26:28,383 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 11:26:47] 2025-06-05 09:26:28,383 | INFO     | **************************************
[2025-06-05 11:26:47] 2025-06-05 09:26:28,384 | INFO     | 
[2025-06-05 11:26:47] 2025-06-05 09:26:28,384 | INFO     | architecture information:
[2025-06-05 11:26:47] 2025-06-05 09:26:28,385 | INFO     | executing command: cat /etc/os-release
[2025-06-05 11:26:47] 2025-06-05 09:26:28,398 | INFO     | cat /etc/os-release:
[2025-06-05 11:26:47] NAME="CentOS Linux"
[2025-06-05 11:26:47] VERSION="7 (Core)"
[2025-06-05 11:26:47] ID="centos"
[2025-06-05 11:26:47] ID_LIKE="rhel fedora"
[2025-06-05 11:26:47] VERSION_ID="7"
[2025-06-05 11:26:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 11:26:47] ANSI_COLOR="0;31"
[2025-06-05 11:26:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 11:26:47] HOME_URL="https://www.centos.org/"
[2025-06-05 11:26:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 11:26:47] 
[2025-06-05 11:26:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 11:26:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 11:26:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 11:26:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 11:26:47] 
[2025-06-05 11:26:47] 2025-06-05 09:26:28,399 | INFO     | **************************************
[2025-06-05 11:26:47] 2025-06-05 09:26:28,901 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-05 11:26:47] 2025-06-05 09:26:28,919 | INFO     | sufficient remaining disk space (13787725824 B)
[2025-06-05 11:26:47] 2025-06-05 09:26:28,919 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 11:26:47] 2025-06-05 09:26:28,920 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 11:26:47] 2025-06-05 09:26:28,920 | INFO     | update_server=False
[2025-06-05 11:26:47] 2025-06-05 09:26:28,920 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 11:26:47] 2025-06-05 09:26:28,920 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 11:26:47] 2025-06-05 09:26:28,921 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 11:26:47] 2025-06-05 09:26:28,921 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 11:26:47] 2025-06-05 09:26:28,921 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 11:26:47] 2025-06-05 09:26:28,921 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 11:26:47] 2025-06-05 09:26:28,921 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 11:26:47] 2025-06-05 09:26:29,073 | INFO     | all job control threads have been joined
[2025-06-05 11:26:47] 2025-06-05 09:26:29,133 | INFO     | all data control threads have been joined
[2025-06-05 11:26:47] 2025-06-05 09:26:29,396 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 11:26:47] 2025-06-05 09:26:29,396 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 11:26:47] 2025-06-05 09:26:29,396 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 11:26:47] 2025-06-05 09:26:29,396 | INFO     | will abort loop
[2025-06-05 11:26:47] 2025-06-05 09:26:29,604 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 11:26:47] 2025-06-05 09:26:29,775 | INFO     | all payload control threads have been joined
[2025-06-05 11:26:47] 2025-06-05 09:26:29,924 | INFO     | [job] retrieve thread has finished
[2025-06-05 11:26:47] 2025-06-05 09:26:29,925 | INFO     | [job] queue monitor thread has finished
[2025-06-05 11:26:47] 2025-06-05 09:26:29,938 | INFO     | [payload] failed_post thread has finished
[2025-06-05 11:26:47] 2025-06-05 09:26:30,043 | INFO     | [payload] validate_post thread has finished
[2025-06-05 11:26:47] 2025-06-05 09:26:30,079 | INFO     | [job] control thread has finished
[2025-06-05 11:26:47] 2025-06-05 09:26:30,103 | INFO     | [data] copytool_in thread has finished
[2025-06-05 11:26:47] 2025-06-05 09:26:30,138 | INFO     | [data] control thread has finished
[2025-06-05 11:26:47] 2025-06-05 09:26:30,162 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 11:26:47] 2025-06-05 09:26:30,258 | INFO     | [job] validate thread has finished
[2025-06-05 11:26:47] 2025-06-05 09:26:30,401 | INFO     | [job] job monitor thread has finished
[2025-06-05 11:26:47] 2025-06-05 09:26:30,579 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 11:26:47] 2025-06-05 09:26:30,615 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 11:26:47] 2025-06-05 09:26:30,780 | INFO     | [payload] control thread has finished
[2025-06-05 11:26:47] 2025-06-05 09:26:30,925 | INFO     | [data] copytool_out thread has finished
[2025-06-05 11:26:47] 2025-06-05 09:26:33,609 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 11:26:47] 2025-06-05 09:26:39,652 | INFO     | job.realtimelogging is not enabled
[2025-06-05 11:26:47] 2025-06-05 09:26:40,657 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 11:26:47] 2025-06-05 09:26:41,792 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139105068357440)>', '<ExcThread(monitor, started 139104368969472)>']
[2025-06-05 11:26:47] 2025-06-05 09:26:41,981 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 11:26:47] 2025-06-05 09:26:41,981 | INFO     | [monitor] control thread has ended
[2025-06-05 11:26:47] 2025-06-05 09:26:46,818 | INFO     | all workflow threads have been joined
[2025-06-05 11:26:47] 2025-06-05 09:26:46,818 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 11:26:47] 2025-06-05 09:26:46,818 | INFO     | traces error code: 0
[2025-06-05 11:26:47] 2025-06-05 09:26:46,818 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 11:26:47] 2025-06-05 09:26:46,925 [wrapper] ==== pilot stdout END ====
[2025-06-05 11:26:47] 2025-06-05 09:26:46,928 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 11:26:47] 2025-06-05 09:26:46,931 [wrapper] pilotpid: 1780949
[2025-06-05 11:26:47] 2025-06-05 09:26:46,933 [wrapper] Pilot exit status: 0
[2025-06-05 11:26:47] 2025-06-05 09:26:46,944 [wrapper] pandaids: 6678072368
[2025-06-05 11:26:47] 2025-06-05 09:26:46,987 [wrapper] cleanup supervisor_pilot 1798790 1780950
[2025-06-05 11:26:47] 2025-06-05 09:26:46,989 [wrapper] Test setup, not cleaning
[2025-06-05 11:26:47] 2025-06-05 09:26:46,991 [wrapper] apfmon messages muted
[2025-06-05 11:26:47] 2025-06-05 09:26:46,993 [wrapper] ==== wrapper stdout END ====
[2025-06-05 11:26:47] 2025-06-05 09:26:46,995 [wrapper] ==== wrapper stderr END ====
[2025-06-05 11:26:47]  *** Error codes and diagnostics ***
[2025-06-05 11:26:47]     "exeErrorCode": 0,
[2025-06-05 11:26:47]     "exeErrorDiag": "",
[2025-06-05 11:26:47]     "pilotErrorCode": 0,
[2025-06-05 11:26:47]     "pilotErrorDiag": "",
[2025-06-05 11:26:47]  *** Listing of results directory ***
[2025-06-05 11:26:47] total 389564
[2025-06-05 11:26:47] -rw-r--r-- 1 boinc boinc    495897 Jun  3 22:49 pilot3.tar.gz
[2025-06-05 11:26:47] -rw-r--r-- 1 boinc boinc      5111 Jun  3 23:03 queuedata.json
[2025-06-05 11:26:47] -rwx------ 1 boinc boinc     37140 Jun  3 23:04 runpilot2-wrapper.sh
[2025-06-05 11:26:47] -rw-r--r-- 1 boinc boinc       100 Jun  5 10:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 11:26:47] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 10:13 run_atlas
[2025-06-05 11:26:47] -rw-r--r-- 1 boinc boinc       105 Jun  5 10:13 job.xml
[2025-06-05 11:26:47] -rw-r--r-- 2 boinc boinc 216133365 Jun  5 10:13 EVNT.45006593._001833.pool.root.1
[2025-06-05 11:26:47] -rw-r--r-- 1 boinc boinc      9498 Jun  5 10:13 init_data.xml
[2025-06-05 11:26:47] -rw-r--r-- 2 boinc boinc     15093 Jun  5 10:13 start_atlas.sh
[2025-06-05 11:26:47] drwxrwx--x 2 boinc boinc      4096 Jun  5 10:13 shared
[2025-06-05 11:26:47] -rw-r--r-- 2 boinc boinc    508874 Jun  5 10:13 input.tar.gz
[2025-06-05 11:26:47] -rw-r--r-- 1 boinc boinc         0 Jun  5 10:13 boinc_lockfile
[2025-06-05 11:26:47] -rw-r--r-- 1 boinc boinc      2524 Jun  5 10:13 pandaJob.out
[2025-06-05 11:26:47] -rw------- 1 boinc boinc    983087 Jun  5 10:13 agis_schedconf.cvmfs.json
[2025-06-05 11:26:47] -rw------- 1 boinc boinc   1598969 Jun  5 10:13 agis_ddmendpoints.agis.ALL.json
[2025-06-05 11:26:47] drwx------ 4 boinc boinc      4096 Jun  5 10:13 pilot3
[2025-06-05 11:26:47] -rw------- 1 boinc boinc 177408199 Jun  5 11:25 HITS.45006595._045687.pool.root.1
[2025-06-05 11:26:47] -rw-r--r-- 1 boinc boinc       529 Jun  5 11:25 boinc_task_state.xml
[2025-06-05 11:26:47] -rw------- 1 boinc boinc        95 Jun  5 11:26 pilot_heartbeat.json
[2025-06-05 11:26:47] -rw------- 1 boinc boinc      1021 Jun  5 11:26 memory_monitor_summary.json
[2025-06-05 11:26:47] -rw------- 1 boinc boinc    347785 Jun  5 11:26 log.45006595._045687.job.log.tgz.1
[2025-06-05 11:26:47] -rw------- 1 boinc boinc      7648 Jun  5 11:26 heartbeat.json
[2025-06-05 11:26:47] -rw-r--r-- 1 boinc boinc        27 Jun  5 11:26 wrapper_checkpoint.txt
[2025-06-05 11:26:47] -rw------- 1 boinc boinc      4741 Jun  5 11:26 pilotlog.txt
[2025-06-05 11:26:47] -rw------- 1 boinc boinc    420672 Jun  5 11:26 log.45006595._045687.job.log.1
[2025-06-05 11:26:47] -rw-r--r-- 1 boinc boinc      8192 Jun  5 11:26 boinc_mmap_file
[2025-06-05 11:26:47] -rw------- 1 boinc boinc       357 Jun  5 11:26 output.list
[2025-06-05 11:26:47] -rw-r--r-- 1 boinc boinc       620 Jun  5 11:26 runtime_log
[2025-06-05 11:26:47] -rw------- 1 boinc boinc    788480 Jun  5 11:26 result.tar.gz
[2025-06-05 11:26:47] -rw------- 1 boinc boinc       638 Jun  5 11:26 ZufMDm2yng7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrCmKDmJOzJnm.diag
[2025-06-05 11:26:47] -rw-r--r-- 1 boinc boinc      8686 Jun  5 11:26 runtime_log.err
[2025-06-05 11:26:47] -rw-r--r-- 1 boinc boinc     22334 Jun  5 11:26 stderr.txt
[2025-06-05 11:26:47] HITS file was successfully produced:
[2025-06-05 11:26:47] -rw------- 1 boinc boinc 177408199 Jun  5 11:25 shared/HITS.pool.root.1
[2025-06-05 11:26:47]  *** Contents of shared directory: ***
[2025-06-05 11:26:47] total 385616
[2025-06-05 11:26:47] -rw-r--r-- 2 boinc boinc 216133365 Jun  5 10:13 ATLAS.root_0
[2025-06-05 11:26:47] -rw-r--r-- 2 boinc boinc     15093 Jun  5 10:13 start_atlas.sh
[2025-06-05 11:26:47] -rw-r--r-- 2 boinc boinc    508874 Jun  5 10:13 input.tar.gz
[2025-06-05 11:26:47] -rw------- 1 boinc boinc 177408199 Jun  5 11:25 HITS.pool.root.1
[2025-06-05 11:26:47] -rw------- 1 boinc boinc    788480 Jun  5 11:26 result.tar.gz
11:26:48 (1777270): run_atlas exited; CPU time 37913.567105
11:26:48 (1777270): called boinc_finish(0)

</stderr_txt>
]]>

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