Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:37:00 (2497012): wrapper (7.7.26015): starting
21:37:00 (2497012): wrapper: running run_atlas (--nthreads 10)
[2025-06-03 21:37:00] Arguments: --nthreads 10
[2025-06-03 21:37:00] Threads: 10
[2025-06-03 21:37:00] Checking for CVMFS
[2025-06-03 21:37:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 21:37:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 21:37:00] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 21:37:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 21:37:00] 2.12.6.0 2656583 35418 283172 146763 1 66 26239127 32935937 12602 16776704 0 132450957 99.647 122285865 30148 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-03 21:37:00] CVMFS is ok
[2025-06-03 21:37:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 21:37:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 21:37:00] Further information can be found at the LHC@home message board.
[2025-06-03 21:37:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 21:37:00] Checking for apptainer binary...
[2025-06-03 21:37:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 21:37:00] Running /usr/bin/apptainer --version
[2025-06-03 21:37:00] apptainer version 1.4.1-1.el9
[2025-06-03 21:37:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 21:37:00] c-4-39.aglt2.org
[2025-06-03 21:37:00] apptainer works
[2025-06-03 21:37:00] Set ATHENA_PROC_NUMBER=10
[2025-06-03 21:37:00] Set ATHENA_CORE_NUMBER=10
[2025-06-03 21:37:00] Starting ATLAS job with PandaID=6678074246
[2025-06-03 21:37:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 23:00:53]  *** The last 200 lines of the pilot log: ***
[2025-06-03 23:00:53]  guid=433756d7-2258-4b86-9187-c04bbd6116f7
[2025-06-03 23:00:53]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 23:00:53]  is_altstaged=None
[2025-06-03 23:00:53]  is_tar=False
[2025-06-03 23:00:53]  lfn=log.45006595._045759.job.log.tgz.1
[2025-06-03 23:00:53]  mtime=0
[2025-06-03 23:00:53]  protocol_id=None
[2025-06-03 23:00:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 23:00:53]  replicas=None
[2025-06-03 23:00:53]  scope=mc23_13p6TeV
[2025-06-03 23:00:53]  status=None
[2025-06-03 23:00:53]  status_code=0
[2025-06-03 23:00:53]  storage_token=
[2025-06-03 23:00:53]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678074246/log.45006595._045759.job.log.tgz.1
[2025-06-03 23:00:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5c/30/log.45006595._045759.job.log.tgz.1
[2025-06-03 23:00:53]  workdir=None
[2025-06-03 23:00:53] ]
[2025-06-03 23:00:53] 2025-06-04 03:00:26,618 | INFO     | transferring file log.45006595._045759.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678074246/log.45006595._045759.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-03 23:00:53] 2025-06-04 03:00:26,618 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678074246/log.45006595._045759.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._045759.job
[2025-06-03 23:00:53] 2025-06-04 03:00:26,638 | INFO     | adding to output.list: log.45006595._045759.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5c/30/log.45006595._045759.job.log.tg
[2025-06-03 23:00:53] 2025-06-04 03:00:26,639 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 23:00:53] 2025-06-04 03:00:26,639 | INFO     | summary of transferred files:
[2025-06-03 23:00:53] 2025-06-04 03:00:26,639 | INFO     |  -- lfn=log.45006595._045759.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 23:00:53] 2025-06-04 03:00:26,640 | INFO     | stage-out finished correctly
[2025-06-03 23:00:53] 2025-06-04 03:00:27,189 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 23:00:53] 2025-06-04 03:00:28,736 | INFO     | job 6678074246 has state=finished
[2025-06-03 23:00:53] 2025-06-04 03:00:28,736 | INFO     | preparing for final server update for job 6678074246 in state='finished'
[2025-06-03 23:00:53] 2025-06-04 03:00:28,737 | INFO     | this job has now completed (state=finished)
[2025-06-03 23:00:53] 2025-06-04 03:00:28,737 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 23:00:53] 2025-06-04 03:00:28,737 | INFO     | log transfer has been attempted: DONE
[2025-06-03 23:00:53] 2025-06-04 03:00:28,738 | INFO     | job 6678074246 has finished - writing final server update
[2025-06-03 23:00:53] 2025-06-04 03:00:28,738 | INFO     | total number of processed events: 400 (read)
[2025-06-03 23:00:53] 2025-06-04 03:00:28,741 | INFO     | executing command: lscpu
[2025-06-03 23:00:53] 2025-06-04 03:00:28,785 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 23:00:53] 2025-06-04 03:00:30,642 | WARNING  | process 2507156 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 23:00:53] 2025-06-04 03:00:30,643 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678074246/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 23:00:53] 2025-06-04 03:00:30,973 | INFO     | number of running child processes to parent process 2507156: 1
[2025-06-03 23:00:53] 2025-06-04 03:00:30,973 | INFO     | maximum number of monitored processes: 6
[2025-06-03 23:00:53] 2025-06-04 03:00:32,841 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 23:00:53] 2025-06-04 03:00:32,841 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678074246/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 23:00:53] 2025-06-04 03:00:32,842 | INFO     | extracted standard info from prmon json
[2025-06-03 23:00:53] 2025-06-04 03:00:32,842 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 23:00:53] 2025-06-04 03:00:32,842 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 23:00:53] 2025-06-04 03:00:32,843 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 23:00:53] 2025-06-04 03:00:32,843 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 23:00:53] 2025-06-04 03:00:32,845 | INFO     | fitting pss+swap vs Time
[2025-06-03 23:00:53] 2025-06-04 03:00:32,845 | INFO     | sum of square deviations: 130793150.0
[2025-06-03 23:00:53] 2025-06-04 03:00:32,846 | INFO     | sum of deviations: 139774484.9999979
[2025-06-03 23:00:53] 2025-06-04 03:00:32,846 | INFO     | mean x: 1749003621.0
[2025-06-03 23:00:53] 2025-06-04 03:00:32,846 | INFO     | mean y: 2531517.1733333333
[2025-06-03 23:00:53] 2025-06-04 03:00:32,846 | INFO     | -- intersect: -1866573098.6907737
[2025-06-03 23:00:53] 2025-06-04 03:00:32,846 | INFO     | intersect: -1866573098.6907737
[2025-06-03 23:00:53] 2025-06-04 03:00:32,847 | INFO     | chi2: 0.9880003953364689
[2025-06-03 23:00:53] 2025-06-04 03:00:32,847 | INFO     | -- intersect: -1866573098.6907737
[2025-06-03 23:00:53] 2025-06-04 03:00:32,847 | INFO     | current memory leak: 1.07 B/s (using 75 data points, chi2=0.99)
[2025-06-03 23:00:53] 2025-06-04 03:00:32,847 | INFO     | ..............................
[2025-06-03 23:00:53] 2025-06-04 03:00:32,848 | INFO     | . Timing measurements:
[2025-06-03 23:00:53] 2025-06-04 03:00:32,848 | INFO     | . get job = 0 s
[2025-06-03 23:00:53] 2025-06-04 03:00:32,848 | INFO     | . initial setup = 2 s
[2025-06-03 23:00:53] 2025-06-04 03:00:32,848 | INFO     | . payload setup = 7 s
[2025-06-03 23:00:53] 2025-06-04 03:00:32,848 | INFO     | . stage-in = 0 s
[2025-06-03 23:00:53] 2025-06-04 03:00:32,848 | INFO     | . payload execution = 4967 s
[2025-06-03 23:00:53] 2025-06-04 03:00:32,848 | INFO     | . stage-out = 0 s
[2025-06-03 23:00:53] 2025-06-04 03:00:32,848 | INFO     | . log creation = 0 s
[2025-06-03 23:00:53] 2025-06-04 03:00:32,848 | INFO     | ..............................
[2025-06-03 23:00:53] 2025-06-04 03:00:33,439 | INFO     | 
[2025-06-03 23:00:53] 2025-06-04 03:00:33,440 | INFO     | job summary report
[2025-06-03 23:00:53] 2025-06-04 03:00:33,440 | INFO     | --------------------------------------------------
[2025-06-03 23:00:53] 2025-06-04 03:00:33,440 | INFO     | PanDA job id: 6678074246
[2025-06-03 23:00:53] 2025-06-04 03:00:33,440 | INFO     | task id: 45006595
[2025-06-03 23:00:53] 2025-06-04 03:00:33,440 | INFO     | errors: (none)
[2025-06-03 23:00:53] 2025-06-04 03:00:33,440 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 23:00:53] 2025-06-04 03:00:33,440 | INFO     | pilot state: finished 
[2025-06-03 23:00:53] 2025-06-04 03:00:33,440 | INFO     | transexitcode: 0
[2025-06-03 23:00:53] 2025-06-04 03:00:33,440 | INFO     | exeerrorcode: 0
[2025-06-03 23:00:53] 2025-06-04 03:00:33,440 | INFO     | exeerrordiag: 
[2025-06-03 23:00:53] 2025-06-04 03:00:33,441 | INFO     | exitcode: 0
[2025-06-03 23:00:53] 2025-06-04 03:00:33,441 | INFO     | exitmsg: OK
[2025-06-03 23:00:53] 2025-06-04 03:00:33,441 | INFO     | cpuconsumptiontime: 41287 s
[2025-06-03 23:00:53] 2025-06-04 03:00:33,441 | INFO     | nevents: 400
[2025-06-03 23:00:53] 2025-06-04 03:00:33,441 | INFO     | neventsw: 0
[2025-06-03 23:00:53] 2025-06-04 03:00:33,441 | INFO     | pid: 2507156
[2025-06-03 23:00:53] 2025-06-04 03:00:33,441 | INFO     | pgrp: 2507156
[2025-06-03 23:00:53] 2025-06-04 03:00:33,441 | INFO     | corecount: 10
[2025-06-03 23:00:53] 2025-06-04 03:00:33,441 | INFO     | event service: False
[2025-06-03 23:00:53] 2025-06-04 03:00:33,441 | INFO     | sizes: {0: 2405184, 1: 2405184, 5: 2405418, 11: 2405474, 4978: 2431530, 4979: 2431529, 4980: 2440710, 4986: 2440824}
[2025-06-03 23:00:53] 2025-06-04 03:00:33,441 | INFO     | --------------------------------------------------
[2025-06-03 23:00:53] 2025-06-04 03:00:33,442 | INFO     | 
[2025-06-03 23:00:53] 2025-06-04 03:00:33,442 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-03 23:00:53] 2025-06-04 03:00:33,463 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 23:00:53] 2025-06-04 03:00:33,463 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 23:00:53] 2025-06-04 03:00:33,463 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 23:00:53] 2025-06-04 03:00:33,463 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 23:00:53] 2025-06-04 03:00:33,464 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 23:00:53] 2025-06-04 03:00:33,464 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 23:00:53] 2025-06-04 03:00:33,464 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 23:00:53] 2025-06-04 03:00:33,464 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 23:00:53] 2025-06-04 03:00:33,464 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 23:00:53] 2025-06-04 03:00:33,464 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 23:00:53] 2025-06-04 03:00:33,464 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 23:00:53] 2025-06-04 03:00:33,464 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 23:00:53] 2025-06-04 03:00:33,465 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 23:00:53] 2025-06-04 03:00:33,465 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 23:00:53] 2025-06-04 03:00:33,465 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 23:00:53] 2025-06-04 03:00:33,465 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 23:00:53] 2025-06-04 03:00:33,465 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 23:00:53] 2025-06-04 03:00:33,465 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 23:00:53] 2025-06-04 03:00:33,465 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 23:00:53] 2025-06-04 03:00:33,466 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 23:00:53] 2025-06-04 03:00:33,466 | INFO     | job 6678074246 has completed (purged errors)
[2025-06-03 23:00:53] 2025-06-04 03:00:33,466 | INFO     | overall cleanup function is called
[2025-06-03 23:00:53] 2025-06-04 03:00:34,150 | INFO     | PID=2500698 has CPU usage=14.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 23:00:53] 2025-06-04 03:00:34,151 | INFO     | .. there are 25 such processes running
[2025-06-03 23:00:53] 2025-06-04 03:00:34,474 | INFO     | --- collectZombieJob: --- 10, [2507156]
[2025-06-03 23:00:53] 2025-06-04 03:00:34,475 | INFO     | zombie collector waiting for pid 2507156
[2025-06-03 23:00:53] 2025-06-04 03:00:34,475 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 23:00:53] 2025-06-04 03:00:34,475 | INFO     | collected zombie processes
[2025-06-03 23:00:53] 2025-06-04 03:00:34,475 | INFO     | will attempt to kill all subprocesses of pid=2507156
[2025-06-03 23:00:53] 2025-06-04 03:00:34,795 | INFO     | process IDs to be killed: [2507156] (in reverse order)
[2025-06-03 23:00:53] 2025-06-04 03:00:34,889 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 23:00:53] 2025-06-04 03:00:34,890 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 23:00:53] 2025-06-04 03:00:34,902 | INFO     | did not find any defunct processes belonging to 2507156
[2025-06-03 23:00:53] 2025-06-04 03:00:34,914 | INFO     | did not find any defunct processes belonging to 2507156
[2025-06-03 23:00:53] 2025-06-04 03:00:34,915 | INFO     | ready for new job
[2025-06-03 23:00:53] 2025-06-04 03:00:34,915 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 23:00:53] 2025-06-04 03:00:34,916 | INFO     | **************************************
[2025-06-03 23:00:53] 2025-06-04 03:00:34,917 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 23:00:53] 2025-06-04 03:00:34,917 | INFO     | **************************************
[2025-06-03 23:00:53] 2025-06-04 03:00:34,917 | INFO     | 
[2025-06-03 23:00:53] 2025-06-04 03:00:34,930 | INFO     | architecture information:
[2025-06-03 23:00:53] 2025-06-04 03:00:34,931 | INFO     | executing command: cat /etc/os-release
[2025-06-03 23:00:53] 2025-06-04 03:00:34,947 | INFO     | cat /etc/os-release:
[2025-06-03 23:00:53] NAME="CentOS Linux"
[2025-06-03 23:00:53] VERSION="7 (Core)"
[2025-06-03 23:00:53] ID="centos"
[2025-06-03 23:00:53] ID_LIKE="rhel fedora"
[2025-06-03 23:00:53] VERSION_ID="7"
[2025-06-03 23:00:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 23:00:53] ANSI_COLOR="0;31"
[2025-06-03 23:00:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 23:00:53] HOME_URL="https://www.centos.org/"
[2025-06-03 23:00:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 23:00:53] 
[2025-06-03 23:00:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 23:00:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 23:00:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 23:00:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 23:00:53] 
[2025-06-03 23:00:53] 2025-06-04 03:00:34,947 | INFO     | **************************************
[2025-06-03 23:00:53] 2025-06-04 03:00:35,450 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-03 23:00:53] 2025-06-04 03:00:35,467 | INFO     | sufficient remaining disk space (76595331072 B)
[2025-06-03 23:00:53] 2025-06-04 03:00:35,467 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 23:00:53] 2025-06-04 03:00:35,467 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 23:00:53] 2025-06-04 03:00:35,467 | INFO     | update_server=False
[2025-06-03 23:00:53] 2025-06-04 03:00:35,468 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 23:00:53] 2025-06-04 03:00:35,468 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 23:00:53] 2025-06-04 03:00:35,468 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:00:53] 2025-06-04 03:00:35,469 | INFO     | aborting loop
[2025-06-03 23:00:53] 2025-06-04 03:00:35,870 | INFO     | all data control threads have been joined
[2025-06-03 23:00:53] 2025-06-04 03:00:36,157 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 23:00:53] 2025-06-04 03:00:36,157 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 23:00:53] 2025-06-04 03:00:36,157 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 23:00:53] 2025-06-04 03:00:36,379 | INFO     | all job control threads have been joined
[2025-06-03 23:00:53] 2025-06-04 03:00:36,473 | INFO     | [job] retrieve thread has finished
[2025-06-03 23:00:53] 2025-06-04 03:00:36,474 | INFO     | [job] job monitor thread has finished
[2025-06-03 23:00:53] 2025-06-04 03:00:36,728 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 23:00:53] 2025-06-04 03:00:36,876 | INFO     | [data] control thread has finished
[2025-06-03 23:00:53] 2025-06-04 03:00:36,889 | INFO     | all payload control threads have been joined
[2025-06-03 23:00:53] 2025-06-04 03:00:37,016 | INFO     | [payload] failed_post thread has finished
[2025-06-03 23:00:53] 2025-06-04 03:00:37,126 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 23:00:53] 2025-06-04 03:00:37,205 | INFO     | [data] copytool_in thread has finished
[2025-06-03 23:00:53] 2025-06-04 03:00:37,275 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 23:00:53] 2025-06-04 03:00:37,385 | INFO     | [job] control thread has finished
[2025-06-03 23:00:53] 2025-06-04 03:00:37,470 | INFO     | [data] copytool_out thread has finished
[2025-06-03 23:00:53] 2025-06-04 03:00:37,803 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 23:00:53] 2025-06-04 03:00:37,810 | INFO     | [job] validate thread has finished
[2025-06-03 23:00:53] 2025-06-04 03:00:37,896 | INFO     | [payload] control thread has finished
[2025-06-03 23:00:53] 2025-06-04 03:00:37,923 | INFO     | [payload] validate_post thread has finished
[2025-06-03 23:00:53] 2025-06-04 03:00:37,967 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 23:00:53] 2025-06-04 03:00:38,973 | INFO     | [job] queue monitor thread has finished
[2025-06-03 23:00:53] 2025-06-04 03:00:41,810 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 23:00:53] 2025-06-04 03:00:46,016 | INFO     | job.realtimelogging is not enabled
[2025-06-03 23:00:53] 2025-06-04 03:00:47,021 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 23:00:53] 2025-06-04 03:00:48,530 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139656100726592)>', '<ExcThread(monitor, started 139655592785664)>']
[2025-06-03 23:00:53] 2025-06-04 03:00:49,218 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 23:00:53] 2025-06-04 03:00:49,218 | INFO     | [monitor] control thread has ended
[2025-06-03 23:00:53] 2025-06-04 03:00:53,534 | INFO     | all workflow threads have been joined
[2025-06-03 23:00:53] 2025-06-04 03:00:53,535 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 23:00:53] 2025-06-04 03:00:53,535 | INFO     | traces error code: 0
[2025-06-03 23:00:53] 2025-06-04 03:00:53,535 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 23:00:53] 2025-06-04 03:00:53,733 [wrapper] ==== pilot stdout END ====
[2025-06-03 23:00:53] 2025-06-04 03:00:53,735 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 23:00:53] 2025-06-04 03:00:53,737 [wrapper] pilotpid: 2500698
[2025-06-03 23:00:53] 2025-06-04 03:00:53,739 [wrapper] Pilot exit status: 0
[2025-06-03 23:00:53] 2025-06-04 03:00:53,749 [wrapper] pandaids: 6678074246
[2025-06-03 23:00:53] 2025-06-04 03:00:53,791 [wrapper] cleanup supervisor_pilot 2809718 2500699
[2025-06-03 23:00:53] 2025-06-04 03:00:53,794 [wrapper] Test setup, not cleaning
[2025-06-03 23:00:53] 2025-06-04 03:00:53,796 [wrapper] apfmon messages muted
[2025-06-03 23:00:53] 2025-06-04 03:00:53,799 [wrapper] ==== wrapper stdout END ====
[2025-06-03 23:00:53] 2025-06-04 03:00:53,800 [wrapper] ==== wrapper stderr END ====
[2025-06-03 23:00:53]  *** Error codes and diagnostics ***
[2025-06-03 23:00:53]     "exeErrorCode": 0,
[2025-06-03 23:00:53]     "exeErrorDiag": "",
[2025-06-03 23:00:53]     "pilotErrorCode": 0,
[2025-06-03 23:00:53]     "pilotErrorDiag": "",
[2025-06-03 23:00:53]  *** Listing of results directory ***
[2025-06-03 23:00:53] total 389120
[2025-06-03 23:00:53] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 16:49 pilot3.tar.gz
[2025-06-03 23:00:53] -rwx------. 1 boincer umatlas     37140 Jun  3 17:02 runpilot2-wrapper.sh
[2025-06-03 23:00:53] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 17:02 queuedata.json
[2025-06-03 23:00:53] -rw-r--r--. 1 boincer umatlas       100 Jun  3 21:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 23:00:53] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  3 21:36 run_atlas
[2025-06-03 23:00:53] -rw-r--r--. 1 boincer umatlas       105 Jun  3 21:36 job.xml
[2025-06-03 23:00:53] -rw-r--r--. 2 boincer umatlas 214121740 Jun  3 21:37 EVNT.45006593._001835.pool.root.1
[2025-06-03 23:00:53] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 21:37 start_atlas.sh
[2025-06-03 23:00:53] drwxrwx--x. 2 boincer umatlas      4096 Jun  3 21:37 shared
[2025-06-03 23:00:53] -rw-r--r--. 2 boincer umatlas    508885 Jun  3 21:37 input.tar.gz
[2025-06-03 23:00:53] -rw-r--r--. 1 boincer umatlas         0 Jun  3 21:37 boinc_lockfile
[2025-06-03 23:00:53] -rw-r--r--. 1 boincer umatlas      2525 Jun  3 21:37 pandaJob.out
[2025-06-03 23:00:53] -rw-------. 1 boincer umatlas    986077 Jun  3 21:37 agis_schedconf.cvmfs.json
[2025-06-03 23:00:53] -rw-------. 1 boincer umatlas   1603667 Jun  3 21:37 agis_ddmendpoints.agis.ALL.json
[2025-06-03 23:00:53] drwx------. 4 boincer umatlas      4096 Jun  3 21:37 pilot3
[2025-06-03 23:00:53] -rw-r--r--. 1 boincer umatlas      6673 Jun  3 22:54 init_data.xml
[2025-06-03 23:00:53] -rw-r--r--. 1 boincer umatlas       529 Jun  3 22:59 boinc_task_state.xml
[2025-06-03 23:00:53] -rw-------. 1 boincer umatlas 178833386 Jun  3 22:59 HITS.45006595._045759.pool.root.1
[2025-06-03 23:00:53] -rw-------. 1 boincer umatlas        95 Jun  3 23:00 pilot_heartbeat.json
[2025-06-03 23:00:53] -rw-------. 1 boincer umatlas      1033 Jun  3 23:00 memory_monitor_summary.json
[2025-06-03 23:00:53] -rw-------. 1 boincer umatlas    352101 Jun  3 23:00 log.45006595._045759.job.log.tgz.1
[2025-06-03 23:00:53] -rw-------. 1 boincer umatlas      7710 Jun  3 23:00 heartbeat.json
[2025-06-03 23:00:53] -rw-r--r--. 1 boincer umatlas      8192 Jun  3 23:00 boinc_mmap_file
[2025-06-03 23:00:53] -rw-r--r--. 1 boincer umatlas        27 Jun  3 23:00 wrapper_checkpoint.txt
[2025-06-03 23:00:53] -rw-------. 1 boincer umatlas      4425 Jun  3 23:00 pilotlog.txt
[2025-06-03 23:00:53] -rw-------. 1 boincer umatlas    486630 Jun  3 23:00 log.45006595._045759.job.log.1
[2025-06-03 23:00:53] -rw-------. 1 boincer umatlas       357 Jun  3 23:00 output.list
[2025-06-03 23:00:53] -rw-r--r--. 1 boincer umatlas       620 Jun  3 23:00 runtime_log
[2025-06-03 23:00:53] -rw-------. 1 boincer umatlas    860160 Jun  3 23:00 result.tar.gz
[2025-06-03 23:00:53] -rw-r--r--. 1 boincer umatlas      8651 Jun  3 23:00 runtime_log.err
[2025-06-03 23:00:53] -rw-------. 1 boincer umatlas       652 Jun  3 23:00 GmxKDm5wng7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7BmKDmdepYNm.diag
[2025-06-03 23:00:53] -rw-r--r--. 1 boincer umatlas     21375 Jun  3 23:00 stderr.txt
[2025-06-03 23:00:53] HITS file was successfully produced:
[2025-06-03 23:00:53] -rw-------. 1 boincer umatlas 178833386 Jun  3 22:59 shared/HITS.pool.root.1
[2025-06-03 23:00:53]  *** Contents of shared directory: ***
[2025-06-03 23:00:53] total 385104
[2025-06-03 23:00:53] -rw-r--r--. 2 boincer umatlas 214121740 Jun  3 21:37 ATLAS.root_0
[2025-06-03 23:00:53] -rw-r--r--. 2 boincer umatlas     15093 Jun  3 21:37 start_atlas.sh
[2025-06-03 23:00:53] -rw-r--r--. 2 boincer umatlas    508885 Jun  3 21:37 input.tar.gz
[2025-06-03 23:00:53] -rw-------. 1 boincer umatlas 178833386 Jun  3 22:59 HITS.pool.root.1
[2025-06-03 23:00:53] -rw-------. 1 boincer umatlas    860160 Jun  3 23:00 result.tar.gz
23:00:54 (2497012): run_atlas exited; CPU time 41344.527008
23:00:54 (2497012): called boinc_finish(0)

</stderr_txt>
]]>

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